ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet47f12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_471234.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 585 bits (295), Expect = e-164 Identities = 415/455 (91%) Strand = Plus / Plus Query: 1 ccactacgggtggcgcaccatcgccgacggcgacgccgtctccatcttcggcgctagcca 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 783 ccactacgggtggcgcaccatggccgacggcgacgccgtctccatcttcggcgccagcca 842 Query: 61 cgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcat 120 | ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 843 catctgggttgaccattgctcgctctccaactgcgccgacggcctcatcgacgccatcat 902 Query: 121 gggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgct 180 ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 903 gggttccactgcaatcacagtgtccaacaactacttcacccaccacaatgaggtgatgct 962 Query: 181 cctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctttcaa 240 |||||||||||| || ||||| ||||||||||||||||||||||||| ||||| ||||| Sbjct: 963 cctgggtcacagcgattcctatgtcaaggacaaggcaatgcaggtcacgatagcattcaa 1022 Query: 241 ccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgt 300 ||||||||| ||||| || || ||||| |||||||||||||||||||||||||||||||| Sbjct: 1023 ccatttcggagaaggtcttattcagagaatgccaaggtgcaggcatggttacttccatgt 1082 Query: 301 ggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgagccgac 360 |||||||||||||||||| ||||||||||||||||| || || ||||| || ||||| || Sbjct: 1083 ggtgaacaatgactacacccactgggagatgtacgcaattggtggaagtgctgagccaac 1142 Query: 361 catcaacagccaggggaaccgctacctcgcgccaaccaacccttttgccaaggaggttac 420 ||||||||||||||| ||||||||||| || || || || || ||||||||||||||||| Sbjct: 1143 catcaacagccagggcaaccgctaccttgctccgacaaatccctttgccaaggaggttac 1202 Query: 421 aaagagagtcgagaccgcccagaccacatggaagg 455 |||||| || ||||| || ||||||| ||||||| Sbjct: 1203 aaagagggttgagactgctcagaccatctggaagg 1237
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 274 bits (138), Expect = 2e-70 Identities = 165/174 (94%) Strand = Plus / Plus Query: 1 ccactacgggtggcgcaccatcgccgacggcgacgccgtctccatcttcggcgctagcca 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 86996 ccactacgggtggcgcaccatggccgacggcgacgccgtctccatcttcggcgccagcca 87055 Query: 61 cgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcat 120 | ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 87056 catctgggttgaccattgctcgctctccaactgcgccgacggcctcatcgacgccatcat 87115 Query: 121 gggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggt 174 ||||||||| || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 87116 gggttccactgcaatcacagtgtccaacaactacttcacccaccacaatgaggt 87169 Score = 172 bits (87), Expect = 6e-40 Identities = 129/143 (90%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtac 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 87819 aggtgcaggcatggttacttccatgtggtgaacaatgactacacccactgggagatgtac 87878 Query: 335 gccatcggaggaagcgccgagccgaccatcaacagccaggggaaccgctacctcgcgcca 394 || || || ||||| || ||||| ||||||||||||||||| ||||||||||| || || Sbjct: 87879 gcaattggtggaagtgctgagccaaccatcaacagccagggcaaccgctaccttgctccg 87938 Query: 395 accaacccttttgccaaggaggt 417 || || || |||||||||||||| Sbjct: 87939 acaaatccctttgccaaggaggt 87961 Score = 127 bits (64), Expect = 3e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 171 aggtgatgctcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcacca 230 |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| | Sbjct: 87539 aggtgatgctcctgggtcacagcgattcctatgtcaaggacaaggcaatgcaggtcacga 87598 Query: 231 tagctttcaaccatttcggggaagggctcatccagaggatgccaaggt 278 |||| |||||||||||||| ||||| || || ||||| |||||||||| Sbjct: 87599 tagcattcaaccatttcggagaaggtcttattcagagaatgccaaggt 87646
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 274 bits (138), Expect = 2e-70 Identities = 165/174 (94%) Strand = Plus / Plus Query: 1 ccactacgggtggcgcaccatcgccgacggcgacgccgtctccatcttcggcgctagcca 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 2471094 ccactacgggtggcgcaccatggccgacggcgacgccgtctccatcttcggcgccagcca 2471153 Query: 61 cgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcat 120 | ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2471154 catctgggttgaccattgctcgctctccaactgcgccgacggcctcatcgacgccatcat 2471213 Query: 121 gggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggt 174 ||||||||| || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2471214 gggttccactgcaatcacagtgtccaacaactacttcacccaccacaatgaggt 2471267 Score = 172 bits (87), Expect = 6e-40 Identities = 129/143 (90%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtac 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2471917 aggtgcaggcatggttacttccatgtggtgaacaatgactacacccactgggagatgtac 2471976 Query: 335 gccatcggaggaagcgccgagccgaccatcaacagccaggggaaccgctacctcgcgcca 394 || || || ||||| || ||||| ||||||||||||||||| ||||||||||| || || Sbjct: 2471977 gcaattggtggaagtgctgagccaaccatcaacagccagggcaaccgctaccttgctccg 2472036 Query: 395 accaacccttttgccaaggaggt 417 || || || |||||||||||||| Sbjct: 2472037 acaaatccctttgccaaggaggt 2472059 Score = 127 bits (64), Expect = 3e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 171 aggtgatgctcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcacca 230 |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| | Sbjct: 2471637 aggtgatgctcctgggtcacagcgattcctatgtcaaggacaaggcaatgcaggtcacga 2471696 Query: 231 tagctttcaaccatttcggggaagggctcatccagaggatgccaaggt 278 |||| |||||||||||||| ||||| || || ||||| |||||||||| Sbjct: 2471697 tagcattcaaccatttcggagaaggtcttattcagagaatgccaaggt 2471744 Score = 101 bits (51), Expect = 2e-18 Identities = 132/159 (83%) Strand = Plus / Minus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 ||||||||||| |||||||||||||||||||| || || || ||||| ||||| |||| | Sbjct: 30024993 tgcgccgacgggctcatcgacgccatcatggggtcgacggcgatcaccgtgtcgaacagc 30024934 Query: 152 tacttcacccaccacaatgaggtgatgctcctgggtcacagtgactcctacctcaaggac 211 |||||| | |||||||||||||||||| | ||||| ||||| ||| ||||| |||| Sbjct: 30024933 tacttctcgcaccacaatgaggtgatgttgctggggcacagcgacgagtacctgtcggac 30024874 Query: 212 aaggcaatgcaggtcaccatagctttcaaccatttcggg 250 |||| |||||||| || || || |||||||| |||||| Sbjct: 30024873 taggcgatgcaggtgactatcgcgttcaaccacttcggg 30024835 Score = 79.8 bits (40), Expect = 7e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 |||||| |||| |||||||||||||||||||| || || || ||||| |||| |||| | Sbjct: 28468563 tgcgccaacgggctcatcgacgccatcatggggtcgacggcgatcaccgtgttgaacagc 28468622 Query: 152 tacttcacccaccacaatgaggtgatgctcctgggtcaca 191 |||||| | |||||||| ||||||||||| ||||| |||| Sbjct: 28468623 tacttctcgcaccacaacgaggtgatgctgctggggcaca 28468662
>gb|U63550.1|FXU63550 Fragaria x ananassa pectate lyase (PL) mRNA, complete cds Length = 1408 Score = 180 bits (91), Expect = 3e-42 Identities = 274/335 (81%) Strand = Plus / Plus Query: 41 tccatcttcggcgctagccacgtctgggtcgaccactgctccctctccaactgcgccgac 100 ||||| ||||| |||||||| | ||||| || ||| ||| ||||| || |||||||| Sbjct: 841 tccatattcggatctagccacatttgggttgatcacaactcgctctcgaattgcgccgat 900 Query: 101 ggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaactacttcacc 160 |||||||| || || ||||||||||| || ||||| || | ||||||||||||||||| Sbjct: 901 ggcctcattgatgctatcatgggttctactgccattaccatttccaacaactacttcact 960 Query: 161 caccacaatgaggtgatgctcctgggtcacagtgactcctacctcaaggacaaggcaatg 220 ||||| |||||||| ||||| |||| || |||||||||||| | ||||||| ||| Sbjct: 961 caccataatgaggttatgctgttggggcatagtgactcctacacaagggacaagcagatg 1020 Query: 221 caggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaaggtgc 280 || || ||||| |||| ||| ||||| || ||||| || ||||| || |||||||| || Sbjct: 1021 caagtgaccattgcttacaatcattttggtgaaggacttatccaaagaatgccaagatgt 1080 Query: 281 aggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgccatc 340 || ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1081 agacatgggtatttccatgtggtgaacaatgactacactcactgggagatgtatgccatt 1140 Query: 341 ggaggaagcgccgagccgaccatcaacagccaggg 375 || ||||| || || || ||||| ||||| ||||| Sbjct: 1141 ggtggaagtgctgatcctaccattaacagtcaggg 1175
>ref|NM_196827.1| Oryza sativa (japonica cultivar-group) putative pectate lyase (OSJNBa0018F16.19), mRNA Length = 1404 Score = 155 bits (78), Expect = 2e-34 Identities = 317/392 (80%), Gaps = 6/392 (1%) Strand = Plus / Plus Query: 2 cactacgggtggcgcaccatcgccgacggcgacgccgtctccatct--tcggcgctagcc 59 |||||||||||||||||| | |||||||||||| | |||| ||| ||||||| || Sbjct: 637 cactacgggtggcgcacccgctccgacggcgacggcatctcgctctactcggcgc--gcg 694 Query: 60 acgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatca 119 |||| ||||| ||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 695 acgtgtgggtggaccactgcgcgctgtcgcgctgcgccgacggcctcatcgacgccatca 754 Query: 120 tgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgc 179 |||| ||||| || ||||| ||||| |||| ||||||| | |||||||| |||||||||| Sbjct: 755 tggggtccacggcgatcaccgtgtcgaacagctacttctcgcaccacaacgaggtgatgc 814 Query: 180 tcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctttca 239 | ||||| ||||| ||| ||||| |||| ||| |||||||| ||||| || |||| Sbjct: 815 tgctggggcacagcgacgggtacctgccggactcggcgatgcaggtgaccatcgcgttca 874 Query: 240 accatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatg 299 |||| |||||| |||| | ||| ||||||| |||||||| || |||||||| Sbjct: 875 accacttcgggatccagctcgtgcagcggatgcctcggtgcaggagggggtacttccaca 934 Query: 300 tggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgag-ccg 358 | || ||||| |||||||| ||||||||||||||||| ||||| |||| |||| || Sbjct: 935 tcgtcaacaacgactacacggcgtgggagatgtacgccattggagggagcg-cgagcccc 993 Query: 359 accatcaacagccaggggaaccgctacctcgc 390 ||||||||||||||||| ||||||||| |||| Sbjct: 994 accatcaacagccagggcaaccgctacatcgc 1025
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 155 bits (78), Expect = 2e-34 Identities = 317/392 (80%), Gaps = 6/392 (1%) Strand = Plus / Minus Query: 2 cactacgggtggcgcaccatcgccgacggcgacgccgtctccatct--tcggcgctagcc 59 |||||||||||||||||| | |||||||||||| | |||| ||| ||||||| || Sbjct: 124890 cactacgggtggcgcacccgctccgacggcgacggcatctcgctctactcggcgc--gcg 124833 Query: 60 acgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatca 119 |||| ||||| ||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 124832 acgtgtgggtggaccactgcgcgctgtcgcgctgcgccgacggcctcatcgacgccatca 124773 Query: 120 tgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgc 179 |||| ||||| || ||||| ||||| |||| ||||||| | |||||||| |||||||||| Sbjct: 124772 tggggtccacggcgatcaccgtgtcgaacagctacttctcgcaccacaacgaggtgatgc 124713 Query: 180 tcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctttca 239 | ||||| ||||| ||| ||||| |||| ||| |||||||| ||||| || |||| Sbjct: 124712 tgctggggcacagcgacgggtacctgccggactcggcgatgcaggtgaccatcgcgttca 124653 Query: 240 accatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatg 299 |||| |||||| |||| | ||| ||||||| |||||||| || |||||||| Sbjct: 124652 accacttcgggatccagctcgtgcagcggatgcctcggtgcaggagggggtacttccaca 124593 Query: 300 tggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgag-ccg 358 | || ||||| |||||||| ||||||||||||||||| ||||| |||| |||| || Sbjct: 124592 tcgtcaacaacgactacacggcgtgggagatgtacgccattggagggagcg-cgagcccc 124534 Query: 359 accatcaacagccaggggaaccgctacctcgc 390 ||||||||||||||||| ||||||||| |||| Sbjct: 124533 accatcaacagccagggcaaccgctacatcgc 124502
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 155 bits (78), Expect = 2e-34 Identities = 317/392 (80%), Gaps = 6/392 (1%) Strand = Plus / Plus Query: 2 cactacgggtggcgcaccatcgccgacggcgacgccgtctccatct--tcggcgctagcc 59 |||||||||||||||||| | |||||||||||| | |||| ||| ||||||| || Sbjct: 112075 cactacgggtggcgcacccgctccgacggcgacggcatctcgctctactcggcgc--gcg 112132 Query: 60 acgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatca 119 |||| ||||| ||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 112133 acgtgtgggtggaccactgcgcgctgtcgcgctgcgccgacggcctcatcgacgccatca 112192 Query: 120 tgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgc 179 |||| ||||| || ||||| ||||| |||| ||||||| | |||||||| |||||||||| Sbjct: 112193 tggggtccacggcgatcaccgtgtcgaacagctacttctcgcaccacaacgaggtgatgc 112252 Query: 180 tcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctttca 239 | ||||| ||||| ||| ||||| |||| ||| |||||||| ||||| || |||| Sbjct: 112253 tgctggggcacagcgacgggtacctgccggactcggcgatgcaggtgaccatcgcgttca 112312 Query: 240 accatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatg 299 |||| |||||| |||| | ||| ||||||| |||||||| || |||||||| Sbjct: 112313 accacttcgggatccagctcgtgcagcggatgcctcggtgcaggagggggtacttccaca 112372 Query: 300 tggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgag-ccg 358 | || ||||| |||||||| ||||||||||||||||| ||||| |||| |||| || Sbjct: 112373 tcgtcaacaacgactacacggcgtgggagatgtacgccattggagggagcg-cgagcccc 112431 Query: 359 accatcaacagccaggggaaccgctacctcgc 390 ||||||||||||||||| ||||||||| |||| Sbjct: 112432 accatcaacagccagggcaaccgctacatcgc 112463
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 155 bits (78), Expect = 2e-34 Identities = 317/392 (80%), Gaps = 6/392 (1%) Strand = Plus / Minus Query: 2 cactacgggtggcgcaccatcgccgacggcgacgccgtctccatct--tcggcgctagcc 59 |||||||||||||||||| | |||||||||||| | |||| ||| ||||||| || Sbjct: 16246001 cactacgggtggcgcacccgctccgacggcgacggcatctcgctctactcggcgc--gcg 16245944 Query: 60 acgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatca 119 |||| ||||| ||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 16245943 acgtgtgggtggaccactgcgcgctgtcgcgctgcgccgacggcctcatcgacgccatca 16245884 Query: 120 tgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgc 179 |||| ||||| || ||||| ||||| |||| ||||||| | |||||||| |||||||||| Sbjct: 16245883 tggggtccacggcgatcaccgtgtcgaacagctacttctcgcaccacaacgaggtgatgc 16245824 Query: 180 tcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctttca 239 | ||||| ||||| ||| ||||| |||| ||| |||||||| ||||| || |||| Sbjct: 16245823 tgctggggcacagcgacgggtacctgccggactcggcgatgcaggtgaccatcgcgttca 16245764 Query: 240 accatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatg 299 |||| |||||| |||| | ||| ||||||| |||||||| || |||||||| Sbjct: 16245763 accacttcgggatccagctcgtgcagcggatgcctcggtgcaggagggggtacttccaca 16245704 Query: 300 tggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgag-ccg 358 | || ||||| |||||||| ||||||||||||||||| ||||| |||| |||| || Sbjct: 16245703 tcgtcaacaacgactacacggcgtgggagatgtacgccattggagggagcg-cgagcccc 16245645 Query: 359 accatcaacagccaggggaaccgctacctcgc 390 ||||||||||||||||| ||||||||| |||| Sbjct: 16245644 accatcaacagccagggcaaccgctacatcgc 16245613
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 155 bits (78), Expect = 2e-34 Identities = 317/392 (80%), Gaps = 6/392 (1%) Strand = Plus / Minus Query: 2 cactacgggtggcgcaccatcgccgacggcgacgccgtctccatct--tcggcgctagcc 59 |||||||||||||||||| | |||||||||||| | |||| ||| ||||||| || Sbjct: 16254242 cactacgggtggcgcacccgctccgacggcgacggcatctcgctctactcggcgc--gcg 16254185 Query: 60 acgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatca 119 |||| ||||| ||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 16254184 acgtgtgggtggaccactgcgcgctgtcgcgctgcgccgacggcctcatcgacgccatca 16254125 Query: 120 tgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgc 179 |||| ||||| || ||||| ||||| |||| ||||||| | |||||||| |||||||||| Sbjct: 16254124 tggggtccacggcgatcaccgtgtcgaacagctacttctcgcaccacaacgaggtgatgc 16254065 Query: 180 tcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctttca 239 | ||||| ||||| ||| ||||| |||| ||| |||||||| ||||| || |||| Sbjct: 16254064 tgctggggcacagcgacgggtacctgccggactcggcgatgcaggtgaccatcgcgttca 16254005 Query: 240 accatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatg 299 |||| |||||| |||| | ||| ||||||| |||||||| || |||||||| Sbjct: 16254004 accacttcgggatccagctcgtgcagcggatgcctcggtgcaggagggggtacttccaca 16253945 Query: 300 tggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgag-ccg 358 | || ||||| |||||||| ||||||||||||||||| ||||| |||| |||| || Sbjct: 16253944 tcgtcaacaacgactacacggcgtgggagatgtacgccattggagggagcg-cgagcccc 16253886 Query: 359 accatcaacagccaggggaaccgctacctcgc 390 ||||||||||||||||| ||||||||| |||| Sbjct: 16253885 accatcaacagccagggcaaccgctacatcgc 16253854
>ref|NM_117445.1| Arabidopsis thaliana lyase/ pectate lyase AT4G13710 mRNA, complete cds Length = 1963 Score = 153 bits (77), Expect = 6e-34 Identities = 209/253 (82%) Strand = Plus / Plus Query: 117 tcatgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtga 176 |||||||||| || || || || || ||||| ||| |||| ||||||||||||||||||| Sbjct: 1011 tcatgggttctactgctattaccgtttccaataaccactttacccaccacaatgaggtga 1070 Query: 177 tgctcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctt 236 || | || || || |||||||| ||| ||||||||| ||||| || ||||| |||| Sbjct: 1071 tgttgcttgggcatagtgactcgtacacaaaggacaagctgatgcaagtaaccattgctt 1130 Query: 237 tcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttcc 296 ||||||||| || ||||| || | ||||| |||||||||||||| ||||| ||||||| Sbjct: 1131 acaaccattttggagaaggactggttcagagaatgccaaggtgcagacatgggtacttcc 1190 Query: 297 atgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgagc 356 ||||||| ||||| |||||||| || ||||||||||||||||| || || || || |||| Sbjct: 1191 atgtggttaacaacgactacacacattgggagatgtacgccattggtgggagtgcagagc 1250 Query: 357 cgaccatcaacag 369 | ||||||||||| Sbjct: 1251 caaccatcaacag 1263
>gb|AY142013.1| Arabidopsis thaliana At4g13710/F18A5_100 mRNA, complete cds Length = 1413 Score = 153 bits (77), Expect = 6e-34 Identities = 209/253 (82%) Strand = Plus / Plus Query: 117 tcatgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtga 176 |||||||||| || || || || || ||||| ||| |||| ||||||||||||||||||| Sbjct: 893 tcatgggttctactgctattaccgtttccaataaccactttacccaccacaatgaggtga 952 Query: 177 tgctcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctt 236 || | || || || |||||||| ||| ||||||||| ||||| || ||||| |||| Sbjct: 953 tgttgcttgggcatagtgactcgtacacaaaggacaagctgatgcaagtaaccattgctt 1012 Query: 237 tcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttcc 296 ||||||||| || ||||| || | ||||| |||||||||||||| ||||| ||||||| Sbjct: 1013 acaaccattttggagaaggactggttcagagaatgccaaggtgcagacatgggtacttcc 1072 Query: 297 atgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgagc 356 ||||||| ||||| |||||||| || ||||||||||||||||| || || || || |||| Sbjct: 1073 atgtggttaacaacgactacacacattgggagatgtacgccattggtgggagtgcagagc 1132 Query: 357 cgaccatcaacag 369 | ||||||||||| Sbjct: 1133 caaccatcaacag 1145
>gb|AF424592.1|AF424592 Arabidopsis thaliana AT4g13710/F18A5_100 mRNA, complete cds Length = 1966 Score = 153 bits (77), Expect = 6e-34 Identities = 209/253 (82%) Strand = Plus / Plus Query: 117 tcatgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtga 176 |||||||||| || || || || || ||||| ||| |||| ||||||||||||||||||| Sbjct: 1013 tcatgggttctactgctattaccgtttccaataaccactttacccaccacaatgaggtga 1072 Query: 177 tgctcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctt 236 || | || || || |||||||| ||| ||||||||| ||||| || ||||| |||| Sbjct: 1073 tgttgcttgggcatagtgactcgtacacaaaggacaagctgatgcaagtaaccattgctt 1132 Query: 237 tcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttcc 296 ||||||||| || ||||| || | ||||| |||||||||||||| ||||| ||||||| Sbjct: 1133 acaaccattttggagaaggactggttcagagaatgccaaggtgcagacatgggtacttcc 1192 Query: 297 atgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgagc 356 ||||||| ||||| |||||||| || ||||||||||||||||| || || || || |||| Sbjct: 1193 atgtggttaacaacgactacacacattgggagatgtacgccattggtgggagtgcagagc 1252 Query: 357 cgaccatcaacag 369 | ||||||||||| Sbjct: 1253 caaccatcaacag 1265
>gb|BT014190.1| Lycopersicon esculentum clone 133367R, mRNA sequence Length = 2049 Score = 141 bits (71), Expect = 2e-30 Identities = 206/251 (82%) Strand = Plus / Plus Query: 167 aatgaggtgatgctcctgggtcacagtgactcctacctcaaggacaaggcaatgcaggtc 226 |||||||| ||||| |||| ||||||||||||||| || |||||| ||||| || Sbjct: 963 aatgaggtcatgctattgggccacagtgactcctacactaaagacaagcagatgcaagtg 1022 Query: 227 accatagctttcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcat 286 || || || | |||||| || || || || ||||| || || ||||| |||||||| ||| Sbjct: 1023 acaattgcatacaaccactttggagagggtctcattcaaagaatgcctaggtgcagacat 1082 Query: 287 ggttacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggagga 346 || ||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 1083 ggctacttccatgtagtgaacaatgactacactcactgggagatgtatgctatcggtgga 1142 Query: 347 agcgccgagccgaccatcaacagccaggggaaccgctacctcgcgccaaccaaccctttt 406 ||||| | || |||||||||||||| || ||| | |||||||| ||| | || | |||| Sbjct: 1143 agcgctaaccccaccatcaacagccaaggaaacagatacctcgccccagctaatcgtttt 1202 Query: 407 gccaaggaggt 417 ||||||||||| Sbjct: 1203 gccaaggaggt 1213
>gb|AY987389.1| Mangifera indica ripening-related pectate lyase mRNA, complete cds Length = 1754 Score = 137 bits (69), Expect = 4e-29 Identities = 233/285 (81%), Gaps = 2/285 (0%) Strand = Plus / Plus Query: 143 tccaacaactacttcacccaccacaatgaggtgatgctcctgggtcacagtgactcctac 202 ||||| ||||||||||||||||| || ||||| ||||| |||| ||||||||||| || Sbjct: 941 tccaataactacttcacccaccataacgaggttatgctattgggacacagtgactcgtat 1000 Query: 203 ctcaag-gacaaggcaatgcaggtcaccatagctttcaaccatttcggggaagggctcat 261 |||| |||||| ||||| || ||||| || | |||||||||||| ||||| || || Sbjct: 1001 a-caagagacaagcagatgcaagtgaccatcgcctacaaccatttcggtgaaggtcttat 1059 Query: 262 ccagaggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacactca 321 |||||| |||||| ||||||||||||| || ||||| ||||||||||||||||| || || Sbjct: 1060 ccagagaatgccacggtgcaggcatgggtatttccacgtggtgaacaatgactatacaca 1119 Query: 322 ctgggagatgtacgccatcggaggaagcgccgagccgaccatcaacagccaggggaaccg 381 |||||| |||| || || || ||||| || || || ||||| ||||||||||| ||| | Sbjct: 1120 ctgggaaatgtttgctattggtggaagtgctgatcccaccattaacagccagggcaacag 1179 Query: 382 ctacctcgcgccaaccaacccttttgccaaggaggttacaaagag 426 ||||| || || | || || |||||||||||||| |||||||| Sbjct: 1180 ataccttgccccctcaaatccctttgccaaggaggtaacaaagag 1224
>gb|AF206319.1| Musa acuminata pectate lyase 1 (PL1) mRNA, complete cds Length = 1496 Score = 133 bits (67), Expect = 6e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||||||||||||||| |||||||| |||||||||| || | ||||||||||||||| Sbjct: 830 atgcaggtcaccatagccttcaaccacttcggggaagacctggttcagaggatgccaagg 889 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgc 336 || ||||||| || ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 890 tgtcggcatggctatttccacgtggtgaacaatgactacacccactgggagatgtacgc 948 Score = 119 bits (60), Expect = 8e-24 Identities = 161/192 (83%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 2 cactacgggtggcgcaccatcgccgacggcgacgccgtctccatcttcggcgctagccac 61 ||||||||||||||||| | | |||||||||| || ||||||||||||| |||||| Sbjct: 614 cactacgggtggcgcacggtgtcggacggcgacggggtgtccatcttcggcggcagccac 673 Query: 62 gtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgcca-tcat 120 |||||||||||||||||| | || ||||||||| ||| |||||||||||||||| |||| Sbjct: 674 gtctgggtcgaccactgcacgctgtccaactgccacgatggcctcatcgacgccattcat 733 Query: 121 gggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgct 180 || |||||||| ||||| | |||||||||||||| | |||||| | |||| ||||| Sbjct: 734 -ggatccaccgcgatcaccatttccaacaactacttgagccaccatgacaaggtcatgct 792 Query: 181 cctgggtcacag 192 ||||||||||| Sbjct: 793 gctgggtcacag 804
>emb|X92943.1|MAPEL M.acuminata mRNA for pectate lyase Length = 1462 Score = 133 bits (67), Expect = 6e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||||||||||||||| |||||||| |||||||||| || | ||||||||||||||| Sbjct: 778 atgcaggtcaccatagccttcaaccacttcggggaagacctggttcagaggatgccaagg 837 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgc 336 || ||||||| || ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 838 tgtcggcatggctatttccacgtggtgaacaatgactacacccactgggagatgtacgc 896 Score = 54.0 bits (27), Expect = 4e-04 Identities = 158/195 (81%), Gaps = 5/195 (2%) Strand = Plus / Plus Query: 2 cactacgggtggcgcaccatcgccgacggcgacgccgtctccatcttcggcgct-agcca 60 ||||||||||||||||| | | |||||||||| || ||||||||||||| ||||| Sbjct: 559 cactacgggtggcgcacggtgtcggacggcgacggggtgtccatcttcggcgggcagcca 618 Query: 61 c-gtct-gggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccat- 117 | |||| |||||||||||||| | || | ||||||| |||||| ||||| ||||| || Sbjct: 619 ccgtcttgggtcgaccactgcacgctgttcaactgccacgacgggctcattgacgcaatt 678 Query: 118 catgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgat 177 ||||||| ||||||| ||||| | |||||||||||||| | ||||| | |||| || Sbjct: 679 catgggt-ccaccgcgatcaccatttccaacaactacttgaggcaccatgacaaggtcat 737 Query: 178 gctcctgggtcacag 192 ||| ||||||||||| Sbjct: 738 gctgctgggtcacag 752
>gb|AF206320.1| Musa acuminata pectate lyase 2 (PL2) mRNA, complete cds Length = 1788 Score = 131 bits (66), Expect = 2e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 242 catttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtg 301 ||||| || ||||| || || ||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 1047 cattttggtgaaggcctgattcagagaatgcccaggtgcaggcatggctacttccacgtg 1106 Query: 302 gtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgagccgacc 361 || |||||||||||||| |||||||||||||||||||| || || ||||| | || || Sbjct: 1107 gtaaacaatgactacacgcactgggagatgtacgccattggcggtagcgcgaatccaacg 1166 Query: 362 atcaacagccaggggaaccgctacctcgcgccaaccaacccttttgccaaggaggttaca 421 |||||||| || || ||||| ||||| ||||| ||||| || ||||| |||||||| ||| Sbjct: 1167 atcaacagtcaaggcaaccgataccttgcgccgaccaatccatttgcaaaggaggtaaca 1226 Query: 422 aa 423 || Sbjct: 1227 aa 1228 Score = 115 bits (58), Expect = 1e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 35 gccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccctctccaactgc 94 ||||| ||||| |||||| | |||||| | ||||| ||||||||||| || ||||||||| Sbjct: 840 gccgtttccattttcggctccagccacatttgggtggaccactgctctctgtccaactgc 899 Query: 95 gccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaactac 154 ||||| || || |||| ||| ||||||| ||||| ||||| || || |||||||| ||| Sbjct: 900 gccgatggacttgtcgatgccgtcatgggctccactgccattacggtctccaacaattac 959 Query: 155 ttcacccaccacaatgaggtgatgct 180 |||||||||||||||||||| ||||| Sbjct: 960 ttcacccaccacaatgaggtcatgct 985
>emb|Z93106.1|MAZ93106 M.acuminata mRNA; clone pBAN UU84 Length = 741 Score = 129 bits (65), Expect = 9e-27 Identities = 155/185 (83%) Strand = Plus / Plus Query: 239 aaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccat 298 |||||||| || ||||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 357 aaccattttggtgaaggtctgattcagagaatgcccaggtgcaggcatggctacttccac 416 Query: 299 gtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgagccg 358 ||||| |||||||||||||| |||||||||||||||||||| || || ||||| | || Sbjct: 417 gtggtaaacaatgactacacgcactgggagatgtacgccattggcggtagcgcgaatcca 476 Query: 359 accatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgccaaggaggtt 418 || |||||||| || || ||||| ||||| ||||| ||||| || ||||| ||||| || Sbjct: 477 acgatcaacagtcaaggcaaccgataccttgcgccgaccaatccatttgcaaaggaagta 536 Query: 419 acaaa 423 ||||| Sbjct: 537 acaaa 541 Score = 115 bits (58), Expect = 1e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 35 gccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccctctccaactgc 94 ||||| ||||| |||||| | |||||| | ||||| ||||||||||| || ||||||||| Sbjct: 153 gccgtttccattttcggctccagccacatttgggtggaccactgctctctgtccaactgc 212 Query: 95 gccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaactac 154 ||||| || || |||| ||| ||||||| ||||| ||||| || || |||||||| ||| Sbjct: 213 gccgatggacttgtcgatgccgtcatgggctccactgccattacggtctccaacaattac 272 Query: 155 ttcacccaccacaatgaggtgatgct 180 |||||||||||||||||||| ||||| Sbjct: 273 ttcacccaccacaatgaggtcatgct 298
>gb|AF243475.1|AF243475 Vitis vinifera pectate lyase (Pel) mRNA, complete cds Length = 1437 Score = 123 bits (62), Expect = 5e-25 Identities = 134/158 (84%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| |||||||| || |||||||||||||| || |||||| | ||||| ||||| || Sbjct: 797 atgcaagtcaccattgccttcaaccatttcggagaggggctcgtgcagagaatgcccaga 856 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgcc 337 || |||||||| || || |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 857 tgtaggcatgggtattttcatgtggtgaacaacgactacacccactgggaaatgtatgcc 916 Query: 338 atcggaggaagcgccgagccgaccatcaacagccaggg 375 || || ||||| || || || ||||||||||||||||| Sbjct: 917 attggtggaagtgctgaccctaccatcaacagccaggg 954
>emb|AJ310672.1|MAC310672 Musa acuminata mRNA for pectate lyase II enzyme (pel2 gene) Length = 1830 Score = 123 bits (62), Expect = 5e-25 Identities = 156/186 (83%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 239 aaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccat 298 |||||||| || ||||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 1045 aaccattttggtgaaggtctgattcagagaatgcccaggtgcaggcatggctacttccac 1104 Query: 299 gtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgccgagccg 358 ||||| |||||||||||||| |||||||||||||||||||| || || ||||| | || Sbjct: 1105 gtggtaaacaatgactacacgcactgggagatgtacgccattggcgggagcgcgaatcca 1164 Query: 359 accatcaacagccaggggaa-ccgctacctcgcgccaaccaacccttttgccaaggaggt 417 || |||||||| || || || ||| ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1165 acgatcaacagtcaaggcaacccgataccttgcgccgaccaatccatttgcaaaggaggt 1224 Query: 418 tacaaa 423 ||||| Sbjct: 1225 aacaaa 1230 Score = 115 bits (58), Expect = 1e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 35 gccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccctctccaactgc 94 ||||| ||||| |||||| | |||||| | ||||| ||||||||||| || ||||||||| Sbjct: 841 gccgtttccattttcggctccagccacatttgggtggaccactgctctctgtccaactgc 900 Query: 95 gccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaactac 154 ||||| || || |||| ||| ||||||| ||||| ||||| || || |||||||| ||| Sbjct: 901 gccgatggacttgtcgatgccgtcatgggctccactgccattacggtctccaacaattac 960 Query: 155 ttcacccaccacaatgaggtgatgct 180 |||||||||||||||||||| ||||| Sbjct: 961 ttcacccaccacaatgaggtcatgct 986
>gb|AF492632.1| Capsicum annuum putative pectate-lyase (upa8) mRNA, partial cds Length = 1041 Score = 117 bits (59), Expect = 3e-23 Identities = 131/155 (84%) Strand = Plus / Plus Query: 225 tcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggc 284 ||||||| ||||| ||||| || |||||||| || |||| || |||||||| || || | Sbjct: 866 tcaccattgcttttaaccactttggggaaggccttgtccaaagaatgccaagatgtagac 925 Query: 285 atggttacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggag 344 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || | Sbjct: 926 atggttacttccatgtggtgaacaatgactacacacactgggaaatgtatgccattggtg 985 Query: 345 gaagcgccgagccgaccatcaacagccaggggaac 379 |||| || || || |||||||| || || |||||| Sbjct: 986 gaagtgctgatcccaccatcaatagtcaagggaac 1020
>gb|AF479831.1| Musa acuminata clone B2.2 pectate lyase mRNA, partial cds Length = 626 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 281 aggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgccatc 340 |||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 14 aggcatggctacttccacgtggtaaacaatgactacacgcactgggagatgtacgccatt 73 Query: 341 ggaggaagcgccgagccgaccatcaacagccaggggaaccgctacctcgcgccaaccaac 400 || || ||||| | || || |||||||| || || ||||| ||||| ||||| ||||| Sbjct: 74 ggcggtagcgcgaatccaacgatcaacagtcaaggcaaccgataccttgcgccgaccaat 133 Query: 401 ccttttgccaaggaggttacaaa 423 || ||||| |||||||| ||||| Sbjct: 134 ccatttgcaaaggaggtaacaaa 156
>ref|NM_111581.2| Arabidopsis thaliana lyase/ pectate lyase AT3G07010 mRNA, complete cds Length = 1673 Score = 107 bits (54), Expect = 3e-20 Identities = 173/210 (82%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 125 tccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgctcctg 184 ||||||||||| ||||| || ||||| | ||||||||||||||||||||| ||| | || Sbjct: 916 tccaccgccattactgtctcaaacaatttcttcacccaccacaatgaggttatgttgttg 975 Query: 185 ggtcacagtgactcctacctcaag-gacaaggcaatgcaggtcaccatagctttcaacca 243 || || ||||| || ||| |||| ||||||| ||||| || || || |||| |||||| Sbjct: 976 gggcatagtgattcataca-caagagacaaggtgatgcaagttacaattgcttacaacca 1034 Query: 244 tttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtggt 303 ||| || ||||| | |||||||| |||||||| || |||||||| || |||||||| || Sbjct: 1035 ttttggtgaaggtttaatccagagaatgccaagatgtaggcatggatatttccatgtagt 1094 Query: 304 gaacaatgactacactcactgggagatgta 333 ||||||||||||||||| ||||| ||||| Sbjct: 1095 taacaatgactacactcattgggaaatgta 1124
>gb|AF339024.1| Fragaria x ananassa pectate lyase B gene, partial cds Length = 5368 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 284 catggttacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcgga 343 ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 4775 catgggtatttccatgtggtgaacaatgactacactcactgggagatgtatgccattggt 4834 Query: 344 ggaagcgccgagccgaccatcaacagccaggggaaccgctacctcgcgccaaccaaccct 403 ||||| || || || ||||||||||| ||||| ||| | || ||||| || | ||||| | Sbjct: 4835 ggaagtgctgatcctaccatcaacagtcagggcaacagatatctcgcccctaacaaccgt 4894 Query: 404 tttgccaaggaggt 417 ||||| || ||||| Sbjct: 4895 tttgctaaagaggt 4908 Score = 77.8 bits (39), Expect = 3e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 41 tccatcttcggcgctagccacgtctgggtcgaccactgctccctctccaactgcgccgac 100 ||||| ||||| |||||||| | ||||| || ||| ||| ||||| || |||||||| Sbjct: 4343 tccatattcggatctagccacatttgggttgatcacaactcgctctcgaattgcgccgat 4402 Query: 101 ggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaactacttcacc 160 |||||||| || || ||||||||||| || ||||| || | ||||||||||||||||| Sbjct: 4403 ggcctcattgatgctatcatgggttctactgccattaccatttccaacaactacttcact 4462 Query: 161 caccacaatgaggtg 175 ||||| ||||||||| Sbjct: 4463 caccataatgaggtg 4477
>gb|AY085026.1| Arabidopsis thaliana clone 124816 mRNA, complete sequence Length = 1633 Score = 107 bits (54), Expect = 3e-20 Identities = 173/210 (82%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 125 tccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgctcctg 184 ||||||||||| ||||| || ||||| | ||||||||||||||||||||| ||| | || Sbjct: 885 tccaccgccattactgtctcaaacaatttcttcacccaccacaatgaggttatgttgttg 944 Query: 185 ggtcacagtgactcctacctcaag-gacaaggcaatgcaggtcaccatagctttcaacca 243 || || ||||| || ||| |||| ||||||| ||||| || || || |||| |||||| Sbjct: 945 gggcatagtgattcataca-caagagacaaggtgatgcaagttacaattgcttacaacca 1003 Query: 244 tttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtggt 303 ||| || ||||| | |||||||| |||||||| || |||||||| || |||||||| || Sbjct: 1004 ttttggtgaaggtttaatccagagaatgccaagatgtaggcatggatatttccatgtagt 1063 Query: 304 gaacaatgactacactcactgggagatgta 333 ||||||||||||||||| ||||| ||||| Sbjct: 1064 taacaatgactacactcattgggaaatgta 1093
>gb|AF339025.1| Fragaria x ananassa pectate lyase gene, partial cds Length = 4143 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtac 334 |||||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3199 aggtgcagacatggatatttccatgtggtgaacaacgactacactcactgggaaatgtat 3258 Query: 335 gccatcggaggaagcgccgagccgaccatcaacagccaggggaaccgctacctcgcgcca 394 |||||||| ||||| || || || || ||||||||||| || ||| | || || ||| Sbjct: 3259 gccatcggtggaagtgcagaccccactatcaacagccaaggcaacagatatgcagctcca 3318 Query: 395 accaacccttttgccaaggaggt 417 |||||||| ||||| |||||||| Sbjct: 3319 accaacccctttgcaaaggaggt 3341
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 101 bits (51), Expect = 2e-18 Identities = 132/159 (83%) Strand = Plus / Minus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 ||||||||||| |||||||||||||||||||| || || || ||||| ||||| |||| | Sbjct: 64675 tgcgccgacgggctcatcgacgccatcatggggtcgacggcgatcaccgtgtcgaacagc 64616 Query: 152 tacttcacccaccacaatgaggtgatgctcctgggtcacagtgactcctacctcaaggac 211 |||||| | |||||||||||||||||| | ||||| ||||| ||| ||||| |||| Sbjct: 64615 tacttctcgcaccacaatgaggtgatgttgctggggcacagcgacgagtacctgtcggac 64556 Query: 212 aaggcaatgcaggtcaccatagctttcaaccatttcggg 250 |||| |||||||| || || || |||||||| |||||| Sbjct: 64555 taggcgatgcaggtgactatcgcgttcaaccacttcggg 64517
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 101 bits (51), Expect = 2e-18 Identities = 132/159 (83%) Strand = Plus / Minus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 ||||||||||| |||||||||||||||||||| || || || ||||| ||||| |||| | Sbjct: 161745 tgcgccgacgggctcatcgacgccatcatggggtcgacggcgatcaccgtgtcgaacagc 161686 Query: 152 tacttcacccaccacaatgaggtgatgctcctgggtcacagtgactcctacctcaaggac 211 |||||| | |||||||||||||||||| | ||||| ||||| ||| ||||| |||| Sbjct: 161685 tacttctcgcaccacaatgaggtgatgttgctggggcacagcgacgagtacctgtcggac 161626 Query: 212 aaggcaatgcaggtcaccatagctttcaaccatttcggg 250 |||| |||||||| || || || |||||||| |||||| Sbjct: 161625 taggcgatgcaggtgactatcgcgttcaaccacttcggg 161587
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 101 bits (51), Expect = 2e-18 Identities = 132/159 (83%) Strand = Plus / Minus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 ||||||||||| |||||||||||||||||||| || || || ||||| ||||| |||| | Sbjct: 2127134 tgcgccgacgggctcatcgacgccatcatggggtcgacggcgatcaccgtgtcgaacagc 2127075 Query: 152 tacttcacccaccacaatgaggtgatgctcctgggtcacagtgactcctacctcaaggac 211 |||||| | |||||||| ||||||||||| ||||| ||||| ||| ||||| |||| Sbjct: 2127074 tacttctcgcaccacaacgaggtgatgctgctggggcacagcgacgagtacctgctggac 2127015 Query: 212 aaggcaatgcaggtcaccatagctttcaaccatttcggg 250 ||| |||||||| ||||| || |||||||| |||||| Sbjct: 2127014 tcggcgatgcaggtgaccatcgcgttcaaccacttcggg 2126976
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 101 bits (51), Expect = 2e-18 Identities = 132/159 (83%) Strand = Plus / Minus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 ||||||||||| |||||||||||||||||||| || || || ||||| ||||| |||| | Sbjct: 2134915 tgcgccgacgggctcatcgacgccatcatggggtcgacggcgatcaccgtgtcgaacagc 2134856 Query: 152 tacttcacccaccacaatgaggtgatgctcctgggtcacagtgactcctacctcaaggac 211 |||||| | |||||||| ||||||||||| ||||| ||||| ||| ||||| |||| Sbjct: 2134855 tacttctcgcaccacaacgaggtgatgctgctggggcacagcgacgagtacctgctggac 2134796 Query: 212 aaggcaatgcaggtcaccatagctttcaaccatttcggg 250 ||| |||||||| ||||| || |||||||| |||||| Sbjct: 2134795 tcggcgatgcaggtgaccatcgcgttcaaccacttcggg 2134757
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 101 bits (51), Expect = 2e-18 Identities = 132/159 (83%) Strand = Plus / Minus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 ||||||||||| |||||||||||||||||||| || || || ||||| ||||| |||| | Sbjct: 23828 tgcgccgacgggctcatcgacgccatcatggggtcgacggcgatcaccgtgtcgaacagc 23769 Query: 152 tacttcacccaccacaatgaggtgatgctcctgggtcacagtgactcctacctcaaggac 211 |||||| | |||||||| ||||||||||| ||||| ||||| ||| ||||| |||| Sbjct: 23768 tacttctcgcaccacaacgaggtgatgctgctggggcacagcgacgagtacctgctggac 23709 Query: 212 aaggcaatgcaggtcaccatagctttcaaccatttcggg 250 ||| |||||||| ||||| || |||||||| |||||| Sbjct: 23708 tcggcgatgcaggtgaccatcgcgttcaaccacttcggg 23670
>ref|NM_113328.2| Arabidopsis thaliana lyase/ pectate lyase AT3G24230 mRNA, complete cds Length = 1481 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 239 aaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccat 298 |||||||| || ||||||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 982 aaccattttggagaagggctcatacagagaatgccaaggtgcaggcatggttatttccat 1041 Query: 299 gtggtgaacaatgactacactcactgggagatgtacgccatcggaggaag 348 ||||| ||||| || ||||| || ||| | ||||| || || |||||||| Sbjct: 1042 gtggttaacaacgattacacacattggaaaatgtatgctattggaggaag 1091
>dbj|AK060609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D03, full insert sequence Length = 955 Score = 99.6 bits (50), Expect = 8e-18 Identities = 110/130 (84%) Strand = Plus / Plus Query: 326 gagatgtacgccatcggaggaagcgccgagccgaccatcaacagccaggggaaccgctac 385 ||||||||||| || || ||||| || ||||| ||||||||||||| ||| ||||||||| Sbjct: 3 gagatgtacgcaattggtggaagtgctgagccaaccatcaacagccggggcaaccgctac 62 Query: 386 ctcgcgccaaccaacccttttgccaaggaggttacaaagagagtcgagaccgcccagacc 445 || || || || || || ||||||||||||||||||||||| || ||||| || |||||| Sbjct: 63 cttgctccgacaaatccctttgccaaggaggttacaaagagggttgagactgctcagacc 122 Query: 446 acatggaagg 455 | ||||||| Sbjct: 123 atctggaagg 132
>dbj|AB218786.1| Prunus mume Pm65 mRNA for Pectate lyase, complete cds Length = 1695 Score = 97.6 bits (49), Expect = 3e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| |||||||| || ||||| || || || |||||| | ||||| | |||||||| Sbjct: 890 atgcaagtcaccattgccttcaatcactttggagaagggttggtccagcgaatgccaaga 949 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgcc 337 || |||||||| || |||||||||||||||||||||||||| || ||||||||||| ||| Sbjct: 950 tgtaggcatggatatttccatgtggtgaacaatgactacacccattgggagatgtatgcc 1009 Query: 338 atcggaggaagcgccgagccgaccatcaacagccaggggaa 378 || ||||| || ||| | || || ||||| ||||| ||||| Sbjct: 1010 attggaggcagtgccaaccctacaatcaatagccaagggaa 1050
>gb|BT020489.1| Arabidopsis thaliana At4g24780 gene, complete cds Length = 1384 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| || ||||| ||||| |||||||| || ||||| || |||| || ||||| ||| Sbjct: 882 atgcaagttaccattgcttttaaccattttggtgaaggccttgtccaaagaatgcccagg 941 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 || || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 942 tgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 997
>ref|NM_118611.2| Arabidopsis thaliana lyase/ pectate lyase AT4G24780 mRNA, complete cds Length = 1633 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| || ||||| ||||| |||||||| || ||||| || |||| || ||||| ||| Sbjct: 914 atgcaagttaccattgcttttaaccattttggtgaaggccttgtccaaagaatgcccagg 973 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 || || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 974 tgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 1029
>gb|AF360140.1| Arabidopsis thaliana putative pectate lyase (At4g24780) mRNA, complete cds Length = 1645 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| || ||||| ||||| |||||||| || ||||| || |||| || ||||| ||| Sbjct: 914 atgcacgttaccattgcttttaaccattttggtgaaggccttgtccaaagaatgcccagg 973 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 || || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 974 tgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 1029
>emb|BX828337.1|CNS0A3S6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZB12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1599 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| || ||||| ||||| |||||||| || ||||| || |||| || ||||| ||| Sbjct: 899 atgcaagttaccattgcttttaaccattttggtgaaggccttgtccaaagaatgcccagg 958 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 || || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 959 tgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 1014
>emb|BX827698.1|CNS0A3X6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH11ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1561 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| || ||||| ||||| |||||||| || ||||| || |||| || ||||| ||| Sbjct: 878 atgcaagttaccattgcttttaaccattttggtgaaggccttgtccaaagaatgcccagg 937 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 || || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 938 tgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 993
>emb|BX827338.1|CNS0A2E8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1588 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| || ||||| ||||| |||||||| || ||||| || |||| || ||||| ||| Sbjct: 899 atgcaagttaccattgcttttaaccattttggtgaaggccttgtccaaagaatgcccagg 958 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 || || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 959 tgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 1014
>gb|AY087561.1| Arabidopsis thaliana clone 36681 mRNA, complete sequence Length = 1631 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| || ||||| ||||| |||||||| || ||||| || |||| || ||||| ||| Sbjct: 914 atgcaagttaccattgcttttaaccattttggtgaaggccttgtccaaagaatgcccagg 973 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 || || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 974 tgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 1029
>ref|NM_113655.2| Arabidopsis thaliana pectate lyase AT3G27400 mRNA, complete cds Length = 1441 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| ||||| || || || ||||||||||| ||||| ||| | || || |||||| || Sbjct: 820 atgcaagtcacaattgcgtttaaccatttcggagaaggactcgttcaaagaatgccacgg 879 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgcc 337 ||||||||||| || |||||||| ||||||||||| || ||||||||||| ||||| || Sbjct: 880 tgcaggcatggatatttccatgtagtgaacaatgattatactcactgggaaatgtatgca 939 Query: 338 atcggaggaag 348 ||||| ||||| Sbjct: 940 atcggtggaag 950
>ref|NM_125713.2| Arabidopsis thaliana lyase/ pectate lyase AT5G63180 mRNA, complete cds Length = 1457 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| ||||| || ||||| |||||||| || ||||| ||| |||| || ||||||||| Sbjct: 880 atgcaagtcactatcgcttttaaccattttggagaaggcctcgtccaaagaatgccaagg 939 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgcc 337 || || ||||| || ||||||||||||||||||||||| || || ||||| ||||| || Sbjct: 940 tgtagacatggatatttccatgtggtgaacaatgactatacacattgggaaatgtatgca 999 Query: 338 atcggaggaag 348 || |||||||| Sbjct: 1000 attggaggaag 1010
>emb|X55193.1|LE9612 Tomato 9612 mRNA Length = 1401 Score = 93.7 bits (47), Expect = 5e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 269 atgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggag 328 |||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 893 atgccaaggtgcagacatggttacttccatgtggttaataatgactatactcactgggaa 952 Query: 329 atgtacgccat 339 ||||| ||||| Sbjct: 953 atgtatgccat 963
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtac 334 |||||||| ||||| |||||||||||||| ||||| |||||||| || |||||||||||| Sbjct: 57670 aggtgcagacatgggtacttccatgtggttaacaacgactacacacattgggagatgtac 57729 Query: 335 gccatcggaggaagcgccgagccgaccatcaacag 369 ||||| || || || || ||||| ||||||||||| Sbjct: 57730 gccattggtgggagtgcagagccaaccatcaacag 57764 Score = 44.1 bits (22), Expect = 0.40 Identities = 49/58 (84%) Strand = Plus / Plus Query: 117 tcatgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggt 174 |||||||||| || || || || || ||||| ||| |||| ||||||||||||||||| Sbjct: 57341 tcatgggttctactgctattaccgtttccaataaccactttacccaccacaatgaggt 57398
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtac 334 |||||||| ||||| |||||||||||||| ||||| |||||||| || |||||||||||| Sbjct: 36578 aggtgcagacatgggtacttccatgtggttaacaacgactacacacattgggagatgtac 36637 Query: 335 gccatcggaggaagcgccgagccgaccatcaacag 369 ||||| || || || || ||||| ||||||||||| Sbjct: 36638 gccattggtgggagtgcagagccaaccatcaacag 36672 Score = 44.1 bits (22), Expect = 0.40 Identities = 49/58 (84%) Strand = Plus / Plus Query: 117 tcatgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggt 174 |||||||||| || || || || || ||||| ||| |||| ||||||||||||||||| Sbjct: 36249 tcatgggttctactgctattaccgtttccaataaccactttacccaccacaatgaggt 36306
>gb|AY058197.1| Arabidopsis thaliana AT5g63180/MDC12_15 mRNA, complete cds Length = 1431 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| ||||| || ||||| |||||||| || ||||| ||| |||| || ||||||||| Sbjct: 880 atgcaagtcactatcgcttttaaccattttggagaaggcctcgtccaaagaatgccaagg 939 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgcc 337 || || ||||| || ||||||||||||||||||||||| || || ||||| ||||| || Sbjct: 940 tgtagacatggatatttccatgtggtgaacaatgactatacacattgggaaatgtatgca 999 Query: 338 atcggaggaag 348 || |||||||| Sbjct: 1000 attggaggaag 1010
>gb|DQ376138.1| Eucalyptus globulus subsp. globulus pectate lyase (PL1) mRNA, partial cds Length = 1043 Score = 89.7 bits (45), Expect = 7e-15 Identities = 252/321 (78%) Strand = Plus / Plus Query: 65 tgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcatgggt 124 ||||| |||||||||||||| | ||||| ||||| || ||||||||||||||||| Sbjct: 211 tgggtggaccactgctccctgtggcactgcaaagacgggctgatcgacgccatcatgggc 270 Query: 125 tccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggtgatgctcctg 184 || || || ||||| | || |||| ||||||| | |||||| | ||||||||||| || Sbjct: 271 tcgacggcgatcacgatatcgaacagctacttcgcgcaccacgacgaggtgatgctgcta 330 Query: 185 ggtcacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagctttcaaccat 244 || |||| ||||| ||| | |||| | |||||||| ||||| || |||||||| Sbjct: 331 ggccacaacgactcgtacgccccggactccgggatgcaggtgaccatcgcgttcaaccac 390 Query: 245 ttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtggtg 304 |||||||| ||||| | ||| ||||||| ||||| ||| || ||| |||| ||||| Sbjct: 391 ttcggggaggggctggtgcagcggatgccgcggtgccggcggggctacatccacgtggtc 450 Query: 305 aacaatgactacactcactgggagatgtacgccatcggaggaagcgccgagccgaccatc 364 ||||| |||| ||| | ||| | |||||||||||||| || |||||| | || |||||| Sbjct: 451 aacaacgacttcacggagtggcatatgtacgccatcggcggcagcgccaatcccaccatc 510 Query: 365 aacagccaggggaaccgctac 385 ||||||||||| ||||||||| Sbjct: 511 aacagccagggcaaccgctac 531
>ref|NM_117391.1| Arabidopsis thaliana lyase/ pectate lyase AT4G13210 mRNA, complete cds Length = 1257 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 238 caaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttcca 297 ||||||||| || ||||| || || ||||| |||||||||||||||||||| ||||| || Sbjct: 858 caaccattttggagaaggtcttatacagagaatgccaaggtgcaggcatggatactttca 917 Query: 298 tgtggtgaacaatgactacactcactgggagatgta 333 || || |||||||| |||||||||||||| ||||| Sbjct: 918 cgtagtaaacaatgattacactcactgggaaatgta 953
>gb|AY376878.1| Malus x domestica pectate lyase mRNA, complete cds Length = 1660 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 269 atgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggag 328 |||||||| || |||||||| || |||||||||||||||||||||||||| || |||||| Sbjct: 962 atgccaagatgtaggcatggatatttccatgtggtgaacaatgactacacccattgggag 1021 Query: 329 atgtacgccat 339 ||||| ||||| Sbjct: 1022 atgtatgccat 1032
>gb|BT012714.1| Lycopersicon esculentum clone 113596R, mRNA sequence Length = 1611 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 269 atgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggag 328 |||||||| || || ||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 885 atgccaagatgtagacatggttacttccatgtggtgaacaatgactacacacattgggaa 944 Query: 329 atgta 333 ||||| Sbjct: 945 atgta 949
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 79.8 bits (40), Expect = 7e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 |||||| |||| |||||||||||||||||||| || || || ||||| |||| |||| | Sbjct: 117238 tgcgccaacgggctcatcgacgccatcatggggtcgacggcgatcaccgtgttgaacagc 117297 Query: 152 tacttcacccaccacaatgaggtgatgctcctgggtcaca 191 |||||| | |||||||| ||||||||||| ||||| |||| Sbjct: 117298 tacttctcgcaccacaacgaggtgatgctgctggggcaca 117337
>emb|BX831029.1|CNS0A0TP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1309 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 233 gctttcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttac 292 ||||| |||||||| || ||||| ||| |||| || ||||||||||| | ||||| || Sbjct: 822 gcttttaaccattttggagaaggcctcgtccaaagaatgccaaggtgtacacatggatat 881 Query: 293 ttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaag 348 ||||||||||||||||||||||| || || ||||| ||||| || || |||||||| Sbjct: 882 ttccatgtggtgaacaatgactatacacattgggaaatgtatgcaattggaggaag 937
>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0109A13, complete sequence Length = 134258 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 ||||||||||| |||||||||||||||||||| || || || |||| |||||| || | | Sbjct: 14740 tgcgccgacgggctcatcgacgccatcatggggtcgacggcgatcattgtgtcgaatagc 14681 Query: 152 tacttcacccaccacaatgaggtgatg 178 |||||| | |||||||| ||||||||| Sbjct: 14680 tacttctcgcaccacaacgaggtgatg 14654
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 ||||||||||| |||||||||||||||||||| || || || |||| |||||| || | | Sbjct: 123812 tgcgccgacgggctcatcgacgccatcatggggtcgacggcgatcattgtgtcgaatagc 123753 Query: 152 tacttcacccaccacaatgaggtgatg 178 |||||| | |||||||| ||||||||| Sbjct: 123752 tacttctcgcaccacaacgaggtgatg 123726
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 ||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 45299 aggtgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 45241
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project) Length = 125803 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 ||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 10209 aggtgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 10267
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 ||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 15875 aggtgtagacatggatacttccatgtggtgaacaatgactacacacattgggagatgta 15817
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 92 tgcgccgacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaac 151 ||||||||||| |||||||||||||||||||| || || || |||| |||||| || | | Sbjct: 14788398 tgcgccgacgggctcatcgacgccatcatggggtcgacggcgatcattgtgtcgaatagc 14788339 Query: 152 tacttcacccaccacaatgaggtgatg 178 |||||| | |||||||| ||||||||| Sbjct: 14788338 tacttctcgcaccacaacgaggtgatg 14788312 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 catcgccgacggcgacgccg 38 |||||||||||||||||||| Sbjct: 20735001 catcgccgacggcgacgccg 20735020
>emb|BX823056.1|CNS0A629 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1481 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 239 aaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccat 298 |||||||| || |||| |||||| ||||| ||||||||||||||||||||| | |||||| Sbjct: 982 aaccattttggagaagcgctcatacagagaatgccaaggtgcaggcatggtcatttccat 1041 Query: 299 gtggtgaacaa 309 ||||| ||||| Sbjct: 1042 gtggttaacaa 1052
>ref|NM_115179.3| Arabidopsis thaliana lyase/ pectate lyase AT3G53190 mRNA, complete cds Length = 1635 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 356 ccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgccaaggag 415 ||||| || ||||| ||||| ||||||||| ||| ||||||||||| |||||||||||| Sbjct: 1118 ccgactattaacagtcagggtaaccgctacaccgccccaaccaacccgtttgccaaggag 1177 Query: 416 gttacaaagagagt 429 || ||||||||||| Sbjct: 1178 gtgacaaagagagt 1191
>gb|AY043234.1| Vitis vinifera putative pectate lyase mRNA, partial cds Length = 429 Score = 75.8 bits (38), Expect = 1e-10 Identities = 131/162 (80%) Strand = Plus / Plus Query: 143 tccaacaactacttcacccaccacaatgaggtgatgctcctgggtcacagtgactcctac 202 ||||||||| |||| |||||||||||||||||||||| |||| |||||||| || || Sbjct: 268 tccaacaaccactttgcccaccacaatgaggtgatgctgttgggccacagtgattcttat 327 Query: 203 ctcaaggacaaggcaatgcaggtcaccatagctttcaaccatttcggggaagggctcatc 262 | |||||| |||||| || || || || | |||||||| || || || || ||| Sbjct: 328 gaaagagacaagcaaatgcaagtgacaattgcctataaccattttggtgagggtctgatc 387 Query: 263 cagaggatgccaaggtgcaggcatggttacttccatgtggtg 304 |||||||||||||||||||| ||||| || |||||||||||| Sbjct: 388 cagaggatgccaaggtgcagacatggatatttccatgtggtg 429
>dbj|AK221575.1| Arabidopsis thaliana mRNA for pectate lyase -like protein, complete cds, clone: RAFL07-82-E15 Length = 1762 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 356 ccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgccaaggag 415 ||||| || ||||| ||||| ||||||||| ||| ||||||||||| |||||||||||| Sbjct: 1231 ccgactattaacagtcagggtaaccgctacaccgccccaaccaacccgtttgccaaggag 1290 Query: 416 gttacaaagagagt 429 || ||||||||||| Sbjct: 1291 gtgacaaagagagt 1304
>gb|AY084835.1| Arabidopsis thaliana clone 119092 mRNA, complete sequence Length = 1525 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 356 ccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgccaaggag 415 ||||| || ||||| ||||| ||||||||| ||| ||||||||||| |||||||||||| Sbjct: 1010 ccgactattaacagtcagggtaaccgctacaccgccccaaccaacccgtttgccaaggag 1069 Query: 416 gttacaaagagagt 429 || ||||||||||| Sbjct: 1070 gtgacaaagagagt 1083
>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2 Length = 70952 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtac 334 |||||||||||||| || |||||||| ||||||||||| || ||||||||||| ||||| Sbjct: 42850 aggtgcaggcatggatatttccatgtagtgaacaatgattatactcactgggaaatgtat 42909 Query: 335 gccatcggaggaag 348 || ||||| ||||| Sbjct: 42910 gcaatcggtggaag 42923
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 293 ttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgcc 352 ||||| |||||||||||||||||||| |||||| |||||||||||||||||| ||| Sbjct: 22478104 ttccacgtggtgaacaatgactacacgcactggctgatgtacgccatcggagggagcaag 22478163 Query: 353 gagccgaccatcaacagccaggggaaccg 381 | ||||| |||| |||||||||||||| Sbjct: 22478164 aacccgacgatcattagccaggggaaccg 22478192 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 63 tctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcatgg 122 ||||| |||||||| |||| | ||||||||| |||||||||||||||||||| ||| | Sbjct: 2377602 tctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcg 2377661 Query: 123 gttccaccgccatcac 138 | |||||||||||||| Sbjct: 2377662 gctccaccgccatcac 2377677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 63 tctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcatgg 122 ||||| |||||||| |||| | ||||||||| |||||||||||||||||||| ||| | Sbjct: 2336240 tctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcg 2336181 Query: 123 gttccaccgccatcac 138 | |||||||||||||| Sbjct: 2336180 gctccaccgccatcac 2336165 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 24 ccgacggcgacgccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccc 83 |||||||||||| | || |||||||||| | | | |||||||| |||||||| ||||| Sbjct: 22474307 ccgacggcgacggcatcagcatcttcggctccaccaacgtctggctcgaccacctctccc 22474366 Query: 84 tctccaactgcgccgacggcctcatcgacgccatc 118 ||||||||||| |||||||||||||||| |||| Sbjct: 22474367 tctccaactgccaggacggcctcatcgacgtcatc 22474401 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 254 gggctcatccagaggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgac 313 |||||| | ||||||||||| ||||||||| ||| | |||||| |||||||||| ||| Sbjct: 2373227 gggctcgtgcagaggatgccgaggtgcaggtttggattcttccacatggtgaacaacgac 2373286 Query: 314 tacactcactgggagatgtacgccatcgg 342 ||||| |||||| |||||||||||||| Sbjct: 2373287 tacacgcactggctcatgtacgccatcgg 2373315 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 293 ttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgcc 352 ||||| ||||||||||| |||||||| |||||| ||||| ||||||||||| ||| Sbjct: 22474689 ttccacgtggtgaacaacgactacacgcactggctcatgtatgccatcggagggagcaag 22474748 Query: 353 gagccgaccatcaacagccaggggaaccgctacctcgcgcc 393 | ||||| |||| ||||||||||||| | ||| ||||||| Sbjct: 22474749 aacccgacgatcatcagccaggggaacaggtacatcgcgcc 22474789 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 43 catcttcggcgctagccacgtctgggtcgaccactgctccctctccaactgcgccgacgg 102 |||||||||| | | | |||||| | |||||||| |||||||||||||||| ||||| Sbjct: 22477749 catcttcggctccaccaacgtctagctcgaccacctctccctctccaactgcaaggacgg 22477808 Query: 103 cctcatcgacgccatc 118 ||||||||||| |||| Sbjct: 22477809 cctcatcgacgtcatc 22477824 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 25 cgacggcgacgccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccct 84 ||||||||||| | ||||| || | ||| | ||| || ||||| |||||||| |||| | Sbjct: 2372910 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 2372969 Query: 85 ctccaactgcgccgacggcctcatcgac 112 ||||||||| ||||||||||||||||| Sbjct: 2372970 gtccaactgctccgacggcctcatcgac 2372997
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0498C03 Length = 146394 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 293 ttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgcc 352 ||||| |||||||||||||||||||| |||||| |||||||||||||||||| ||| Sbjct: 115237 ttccacgtggtgaacaatgactacacgcactggctgatgtacgccatcggagggagcaag 115296 Query: 353 gagccgaccatcaacagccaggggaaccg 381 | ||||| |||| |||||||||||||| Sbjct: 115297 aacccgacgatcattagccaggggaaccg 115325 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 24 ccgacggcgacgccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccc 83 |||||||||||| | || |||||||||| | | | |||||||| |||||||| ||||| Sbjct: 111440 ccgacggcgacggcatcagcatcttcggctccaccaacgtctggctcgaccacctctccc 111499 Query: 84 tctccaactgcgccgacggcctcatcgacgccatc 118 ||||||||||| |||||||||||||||| |||| Sbjct: 111500 tctccaactgccaggacggcctcatcgacgtcatc 111534 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 293 ttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgcc 352 ||||| ||||||||||| |||||||| |||||| ||||| ||||||||||| ||| Sbjct: 111822 ttccacgtggtgaacaacgactacacgcactggctcatgtatgccatcggagggagcaag 111881 Query: 353 gagccgaccatcaacagccaggggaaccgctacctcgcgcc 393 | ||||| |||| ||||||||||||| | ||| ||||||| Sbjct: 111882 aacccgacgatcatcagccaggggaacaggtacatcgcgcc 111922 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 43 catcttcggcgctagccacgtctgggtcgaccactgctccctctccaactgcgccgacgg 102 |||||||||| | | | |||||| | |||||||| |||||||||||||||| ||||| Sbjct: 114882 catcttcggctccaccaacgtctagctcgaccacctctccctctccaactgcaaggacgg 114941 Query: 103 cctcatcgacgccatc 118 ||||||||||| |||| Sbjct: 114942 cctcatcgacgtcatc 114957
>dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28B04, TM0170, complete sequence Length = 101172 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 233 gctttcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttac 292 |||||||||||||| ||| |||| || | ||||||||||||||||||||| |||| | Sbjct: 84534 gctttcaaccattttgggcaaggactggtacagaggatgccaaggtgcaggtggggtttc 84593 Query: 293 ttccatgtggtgaacaatgactacactcactgg 325 || || || || ||||||||||||||||||||| Sbjct: 84594 tttcacgttgtcaacaatgactacactcactgg 84626
>ref|NM_100348.2| Arabidopsis thaliana lyase/ pectate lyase AT1G04680 mRNA, complete cds Length = 1921 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 290 tacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagc 349 ||||||||||| || ||||| ||||||||||||||||| |||||||| || || || ||| Sbjct: 1045 tacttccatgttgttaacaacgactacactcactgggaaatgtacgcaataggtggtagc 1104 Query: 350 gccgagccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgcc 409 || | ||||| |||||||| || || |||||||| ||| |||| ||||| ||||| Sbjct: 1105 gcaaacccgacaatcaacagtcaaggaaaccgctatgccgccccaaaaaacccctttgct 1164 Query: 410 aaggaggttacaaagagagt 429 || ||||| || |||||||| Sbjct: 1165 aaagaggtgacgaagagagt 1184
>ref|NM_113378.1| Arabidopsis thaliana pectate lyase AT3G24670 mRNA, complete cds Length = 1323 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 239 aaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccat 298 |||||||| ||||||||||| || ||||| ||||| ||||| || |||||||| |||||| Sbjct: 925 aaccattttggggaagggcttatacagagaatgccgaggtgtagacatggttatttccat 984 Query: 299 gtggtgaacaatgactacactcactggg 326 || || |||||||| || ||||| |||| Sbjct: 985 gttgtaaacaatgattatactcattggg 1012
>emb|Y09541.1|ZEPCLY Zinnia elegans mRNA for pectate lyase Length = 1440 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 269 atgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggag 328 |||||||| || || ||||| || ||||||||||||||||||||||| || || |||||| Sbjct: 865 atgccaagatgtagacatgggtatttccatgtggtgaacaatgactatacacattgggag 924 Query: 329 atgtacgccatcggaggaag 348 ||||| || || |||||||| Sbjct: 925 atgtatgctattggaggaag 944
>gb|AC136286.30| Medicago truncatula clone mth2-6c9, complete sequence Length = 127568 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 260 atccagaggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacact 319 ||||| |||||||||||||| || ||||| |||||||| | ||||||||||||||| Sbjct: 65001 atccaaaggatgccaaggtgtagatttggttttatccatgtgcttaacaatgactacact 65060 Query: 320 cactgggagatgtacgccat 339 |||||||||||||| ||||| Sbjct: 65061 cactgggagatgtatgccat 65080
>gb|AY065034.1| Arabidopsis thaliana At1g04680/T1G11_6 mRNA, complete cds Length = 1459 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 290 tacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagc 349 ||||||||||| || ||||| ||||||||||||||||| |||||||| || || || ||| Sbjct: 1026 tacttccatgttgttaacaacgactacactcactgggaaatgtacgcaataggtggtagc 1085 Query: 350 gccgagccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgcc 409 || | ||||| |||||||| || || |||||||| ||| |||| ||||| ||||| Sbjct: 1086 gcaaacccgacaatcaacagtcaaggaaaccgctatgccgccccaaaaaacccctttgct 1145 Query: 410 aaggaggttacaaagagagt 429 || ||||| || |||||||| Sbjct: 1146 aaagaggtgacgaagagagt 1165
>emb|BX817792.1|CNS0AAQA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZA03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1706 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 290 tacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagc 349 ||||||||||| || ||||| ||||||||||||||||| |||||||| || || || ||| Sbjct: 1015 tacttccatgttgttaacaacgactacactcactgggaaatgtacgcaataggtggtagc 1074 Query: 350 gccgagccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgcc 409 || | ||||| |||||||| || || |||||||| ||| |||| ||||| ||||| Sbjct: 1075 gcaaacccgacaatcaacagtcaaggaaaccgctatgccgccccaaaaaacccctttgct 1134 Query: 410 aaggaggttacaaagagagt 429 || ||||| || |||||||| Sbjct: 1135 aaagaggtgacgaagagagt 1154
>emb|BX842145.1|CNS09YBJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1308 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 239 aaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccat 298 |||||||| ||||||||||| || ||||| ||||| ||||| || |||||||| |||||| Sbjct: 643 aaccattttggggaagggcttatacagagaatgccgaggtgtagacatggttatttccat 702 Query: 299 gtggtgaacaatgactacactcactggg 326 || || |||||||| || ||||| |||| Sbjct: 703 gttgtaaacaatgattatactcattggg 730
>gb|AY087724.1| Arabidopsis thaliana clone 37952 mRNA, complete sequence Length = 1782 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 290 tacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagc 349 ||||||||||| || ||||| ||||||||||||||||| |||||||| || || || ||| Sbjct: 1045 tacttccatgttgttaacaacgactacactcactgggaaatgtacgcaataggtggtagc 1104 Query: 350 gccgagccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgcc 409 || | ||||| |||||||| || || |||||||| ||| |||| ||||| ||||| Sbjct: 1105 gcaaacccgacaatcaacagtcaaggaaaccgctatgccgccccaaaaaacccctttgct 1164 Query: 410 aaggaggttacaaagagagt 429 || ||||| || |||||||| Sbjct: 1165 aaagaggtgacgaagagagt 1184
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 63 tctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcatgg 122 ||||| |||||||| |||| | ||||||||| |||||||||||||||||||| ||| | Sbjct: 9060 tctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcg 9119 Query: 123 gttccaccgccatcac 138 | |||||||||||||| Sbjct: 9120 gctccaccgccatcac 9135 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 254 gggctcatccagaggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgac 313 |||||| | ||||||||||| ||||||||| ||| | |||||| |||||||||| ||| Sbjct: 4685 gggctcgtgcagaggatgccgaggtgcaggtttggattcttccacatggtgaacaacgac 4744 Query: 314 tacactcactgggagatgtacgccatcgg 342 ||||| |||||| |||||||||||||| Sbjct: 4745 tacacgcactggctcatgtacgccatcgg 4773 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 25 cgacggcgacgccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccct 84 ||||||||||| | ||||| || | ||| | ||| || ||||| |||||||| |||| | Sbjct: 4368 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 4427 Query: 85 ctccaactgcgccgacggcctcatcgac 112 ||||||||| ||||||||||||||||| Sbjct: 4428 gtccaactgctccgacggcctcatcgac 4455
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 63 tctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcatgg 122 ||||| |||||||| |||| | ||||||||| |||||||||||||||||||| ||| | Sbjct: 99403 tctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcg 99462 Query: 123 gttccaccgccatcac 138 | |||||||||||||| Sbjct: 99463 gctccaccgccatcac 99478 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 63 tctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcatgg 122 ||||| |||||||| |||| | ||||||||| |||||||||||||||||||| ||| | Sbjct: 58041 tctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcg 57982 Query: 123 gttccaccgccatcac 138 | |||||||||||||| Sbjct: 57981 gctccaccgccatcac 57966 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 254 gggctcatccagaggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgac 313 |||||| | ||||||||||| ||||||||| ||| | |||||| |||||||||| ||| Sbjct: 95028 gggctcgtgcagaggatgccgaggtgcaggtttggattcttccacatggtgaacaacgac 95087 Query: 314 tacactcactgggagatgtacgccatcgg 342 ||||| |||||| |||||||||||||| Sbjct: 95088 tacacgcactggctcatgtacgccatcgg 95116 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 25 cgacggcgacgccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccct 84 ||||||||||| | ||||| || | ||| | ||| || ||||| |||||||| |||| | Sbjct: 94711 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 94770 Query: 85 ctccaactgcgccgacggcctcatcgac 112 ||||||||| ||||||||||||||||| Sbjct: 94771 gtccaactgctccgacggcctcatcgac 94798
>dbj|AK118210.1| Arabidopsis thaliana At3g24670 mRNA for putative pectate lyase, complete cds, clone: RAFL19-52-J09 Length = 1291 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 239 aaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccat 298 |||||||| ||||||||||| || ||||| ||||| ||||| || |||||||| |||||| Sbjct: 647 aaccattttggggaagggcttatacagagaatgccgaggtgtagacatggttatttccat 706 Query: 299 gtggtgaacaatgactacactcactggg 326 || || |||||||| || ||||| |||| Sbjct: 707 gttgtaaacaatgattatactcattggg 734
>dbj|AK100191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P11, full insert sequence Length = 1659 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 63 tctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccatcatgg 122 ||||| |||||||| |||| | ||||||||| |||||||||||||||||||| ||| | Sbjct: 943 tctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcg 1002 Query: 123 gttccaccgccatcac 138 | |||||||||||||| Sbjct: 1003 gctccaccgccatcac 1018
>gb|AY066033.1| Arabidopsis thaliana At1g04680/T1G11_6 mRNA, complete cds Length = 1065 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 290 tacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagc 349 ||||||||||| || ||||| ||||||||||||||||| |||||||| || || || ||| Sbjct: 943 tacttccatgttgttaacaacgactacactcactgggaaatgtacgcaataggtggtagc 1002 Query: 350 gccgagccgaccatcaacagccaggggaaccgcta 384 || | ||||| |||||||| || || |||||||| Sbjct: 1003 gcaaacccgacaatcaacagtcaaggaaaccgcta 1037
>gb|AY054200.1| Arabidopsis thaliana At1g04680/T1G11_6 mRNA, complete cds Length = 1788 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 290 tacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagc 349 ||||||||||| || ||||| ||||||||||||||||| |||||||| || || || ||| Sbjct: 1045 tacttccatgttgttaacaacgactacactcactgggaaatgtacgcaataggtggtagc 1104 Query: 350 gccgagccgaccatcaacagccaggggaaccgcta 384 || | ||||| |||||||| || || |||||||| Sbjct: 1105 gcaaacccgacaatcaacagtcaaggaaaccgcta 1139
>dbj|AK072583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G06, full insert sequence Length = 2078 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 24 ccgacggcgacgccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccc 83 |||||||||||| | || |||||||||| | | | |||||||| |||||||| ||||| Sbjct: 930 ccgacggcgacggcatcagcatcttcggctccaccaacgtctggctcgaccacctctccc 989 Query: 84 tctccaactgcgccgacggcctcatcgacgccatc 118 ||||||||||| |||||||||||||||| |||| Sbjct: 990 tctccaactgccaggacggcctcatcgacgtcatc 1024 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 293 ttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgcc 352 ||||| ||||||||||| |||||||| |||||| ||||| ||||||||||| ||| Sbjct: 1199 ttccacgtggtgaacaacgactacacgcactggctcatgtatgccatcggagggagcaag 1258 Query: 353 gagccgaccatcaacagccaggggaaccgctacctcgcgcc 393 | ||||| |||| ||||||||||||| | ||| ||||||| Sbjct: 1259 aacccgacgatcatcagccaggggaacaggtacatcgcgcc 1299
>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete sequence Length = 100079 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 290 tacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagc 349 ||||||||||| || ||||| ||||||||||||||||| |||||||| || || || ||| Sbjct: 28584 tacttccatgttgttaacaacgactacactcactgggaaatgtacgcaataggtggtagc 28643 Query: 350 gccgagccgaccatcaacagccaggggaaccgcta 384 || | ||||| |||||||| || || |||||||| Sbjct: 28644 gcaaacccgacaatcaacagtcaaggaaaccgcta 28678
>emb|BX824317.1|CNS0A5LB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1601 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 356 ccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgccaaggag 415 ||||| || ||||| ||||| ||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 1121 ccgactattaacagtcagggtaaccgctacaccgccccaacaaacccgtttgccaaggag 1180 Query: 416 gttacaaagagagt 429 || ||||||||||| Sbjct: 1181 gtgacaaagagagt 1194
>gb|DQ073046.1| Gossypium hirsutum pectate lyase mRNA, complete cds Length = 1539 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 284 catggttacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcgga 343 ||||| || ||||| ||||||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 918 catgggtatttccacgtggtgaacaatgactatactcattgggaaatgtatgccattgga 977 Query: 344 ggaag 348 ||||| Sbjct: 978 ggaag 982
>dbj|AK070509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054E18, full insert sequence Length = 1870 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 254 gggctcatccagaggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgac 313 |||||| | ||||||||||| ||||||||| ||| | |||||| |||||||||| ||| Sbjct: 1159 gggctcgtgcagaggatgccgaggtgcaggtttggattcttccacatggtgaacaacgac 1218 Query: 314 tacactcactgggagatgtacgccatcgg 342 ||||| |||||| |||||||||||||| Sbjct: 1219 tacacgcactggctcatgtacgccatcgg 1247 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 25 cgacggcgacgccgtctccatcttcggcgctagccacgtctgggtcgaccactgctccct 84 ||||||||||| | ||||| || | ||| | ||| || ||||| |||||||| |||| | Sbjct: 930 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 989 Query: 85 ctccaactgcgccgacggcctcatcgac 112 ||||||||| ||||||||||||||||| Sbjct: 990 gtccaactgctccgacggcctcatcgac 1017
>dbj|AB048260.1| Salix gilgiana SgPL1 mRNA for pectate lyase, complete cds Length = 1476 Score = 65.9 bits (33), Expect = 1e-07 Identities = 129/161 (80%) Strand = Plus / Plus Query: 158 acccaccacaatgaggtgatgctcctgggtcacagtgactcctacctcaaggacaaggca 217 ||||| ||||| |||| |||||||||||||||||||| ||| |||||||| Sbjct: 762 acccatcacaacaaggtcatgctcctgggtcacagtgatagctataaacaggacaagaac 821 Query: 218 atgcaggtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaagg 277 ||||| |||||||| || |||||||| || || ||||| || | ||||| ||||||||| Sbjct: 822 atgcaagtcaccattgccttcaaccactttggtgaaggacttgtgcagagaatgccaagg 881 Query: 278 tgcaggcatggttacttccatgtggtgaacaatgactacac 318 ||||| ||||| || || || |||||||| ||||||||||| Sbjct: 882 tgcagacatggatattttcacgtggtgaataatgactacac 922
>ref|NM_126327.3| Arabidopsis thaliana lyase/ pectate lyase AT2G02720 mRNA, complete cds Length = 1723 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 294 tccatgtggtgaacaatgactacactcactgggagatgta 333 ||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1169 tccatgttgtgaacaatgactacactcactgggaaatgta 1208
>gb|BT015946.1| Arabidopsis thaliana At2g02720 mRNA, complete cds Length = 1368 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 294 tccatgtggtgaacaatgactacactcactgggagatgta 333 ||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1007 tccatgttgtgaacaatgactacactcactgggaaatgta 1046
>emb|X67158.1|NTPECL1 N.tabacum gene for pectate lyase Length = 1713 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 266 aggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgg 325 ||||||||||| |||||| ||| | |||||| |||||||||||||||||||||| ||| Sbjct: 1236 aggatgccaagatgcaggtttggatttttccatctggtgaacaatgactacactcattgg 1295 Query: 326 gaga 329 |||| Sbjct: 1296 gaga 1299
>emb|X61102.1|NTPTLG N.tabacum gene for pectate lyase Length = 1389 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 266 aggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgg 325 ||||||||||| |||||| ||| | |||||| |||||||||||||||||||||| ||| Sbjct: 912 aggatgccaagatgcaggtttggatttttccatctggtgaacaatgactacactcattgg 971 Query: 326 gaga 329 |||| Sbjct: 972 gaga 975
>gb|AC002521.3| Arabidopsis thaliana chromosome 2 clone T20F6 map CIC11A04, complete sequence Length = 81004 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 294 tccatgtggtgaacaatgactacactcactgggagatgta 333 ||||||| |||||||||||||||||||||||||| ||||| Sbjct: 63117 tccatgttgtgaacaatgactacactcactgggaaatgta 63078
>gb|BT005757.1| Arabidopsis thaliana clone RAFL15-40-J23 (R50168) putative pectate lyase (At2g02720) mRNA, complete cds Length = 1738 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 294 tccatgtggtgaacaatgactacactcactgggagatgta 333 ||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1169 tccatgttgtgaacaatgactacactcactgggaaatgta 1208
>gb|AY109588.1| Zea mays CL2558_1 mRNA sequence Length = 1195 Score = 63.9 bits (32), Expect = 4e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 14 cgcaccatcgccgacggcgacgccgtctccatcttcggcgctagccacgtctgggtcgac 73 ||||||| ||||||||||||| | ||||| ||||| ||| | | |||||||| ||||| Sbjct: 220 cgcaccagggccgacggcgacggcatctccctcttctccgccaccaacgtctggatcgac 279 Query: 74 cactgctccctctccaactgcgccgacggcctcatcgacg 113 ||| |||| | |||||||||| |||||||||||||||| Sbjct: 280 cacatctccatgtccaactgcgaggacggcctcatcgacg 319 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 292 cttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagcgc 351 |||||| || || ||||| |||||||| |||||| ||||||||||| || || ||| Sbjct: 498 cttccacgttgtcaacaacgactacacgcactggctcatgtacgccattggcggcggcga 557 Query: 352 cgagccgaccatcaacagccaggggaaccgctac 385 || ||| ||||||| ||||||||| ||||||||| Sbjct: 558 cgcgccaaccatcatcagccagggcaaccgctac 591
>ref|NM_120513.2| Arabidopsis thaliana pectate lyase AT5G04310 mRNA, complete cds Length = 1710 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 236 ttcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttc 295 |||||||||||||| |||||||| | ||||||||||| |||| ||||| ||||| || Sbjct: 931 ttcaaccatttcggagaagggcttgttcagaggatgccgcggtgtaggcacggttatatc 990 Query: 296 catgtggtgaacaatgact 314 || ||||||||||| |||| Sbjct: 991 cacgtggtgaacaacgact 1009 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 98 gacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaactacttc 157 ||||| |||||||||| |||| | | |||||||||| |||| | ||||||||||| ||| Sbjct: 793 gacggactcatcgacgtcatcctcgcttccaccgccgtcacaatctccaacaactatttc 852 Query: 158 acccaccacaatgaggtgatgctcctgggtcac 190 | || ||| | ||||| |||||||| |||||| Sbjct: 853 tctcatcacgacgaggttatgctcctaggtcac 885
>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35 Length = 199280 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 |||||||||||||| ||||| || || || |||||||| |||||||||||||| ||||| Sbjct: 153665 aggtgcaggcatggatactttcacgtagtaaacaatgattacactcactgggaaatgta 153723
>emb|AL049751.1|ATF17N18 Arabidopsis thaliana DNA chromosome 4, BAC clone F17N18 (ESSA project) Length = 86377 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 |||||||||||||| ||||| || || || |||||||| |||||||||||||| ||||| Sbjct: 29780 aggtgcaggcatggatactttcacgtagtaaacaatgattacactcactgggaaatgta 29838
>gb|AY098948.1| Arabidopsis thaliana At5g04300/At5g04300 mRNA, complete cds Length = 1050 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 236 ttcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttc 295 |||||||||||||| |||||||| | ||||||||||| |||| ||||| ||||| || Sbjct: 424 ttcaaccatttcggagaagggcttgttcagaggatgccgcggtgtaggcacggttatatc 483 Query: 296 catgtggtgaacaatgact 314 || ||||||||||| |||| Sbjct: 484 cacgtggtgaacaacgact 502 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 98 gacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaactacttc 157 ||||| |||||||||| |||| | | |||||||||| |||| | ||||||||||| ||| Sbjct: 286 gacggactcatcgacgtcatcctcgcttccaccgccgtcacaatctccaacaactatttc 345 Query: 158 acccaccacaatgaggtgatgctcctgggtcac 190 | || ||| | ||||| |||||||| |||||| Sbjct: 346 tctcatcacgacgaggttatgctcctaggtcac 378
>gb|AY058064.1| Arabidopsis thaliana putative pectate lyase mRNA, complete cds Length = 1697 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 236 ttcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttc 295 |||||||||||||| |||||||| | ||||||||||| |||| ||||| ||||| || Sbjct: 917 ttcaaccatttcggagaagggcttgttcagaggatgccgcggtgtaggcacggttatatc 976 Query: 296 catgtggtgaacaatgact 314 || ||||||||||| |||| Sbjct: 977 cacgtggtgaacaacgact 995 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 98 gacggcctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaactacttc 157 ||||| |||||||||| |||| | | |||||||||| |||| | ||||||||||| ||| Sbjct: 779 gacggactcatcgacgtcatcctcgcttccaccgccgtcacaatctccaacaactatttc 838 Query: 158 acccaccacaatgaggtgatgctcctgggtcac 190 | || ||| | ||||| |||||||| |||||| Sbjct: 839 tctcatcacgacgaggttatgctcctaggtcac 871
>gb|AC016827.7|ATAC016827 Arabidopsis thaliana chromosome III BAC F17A9 genomic sequence, complete sequence Length = 90142 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 125 tccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggt 174 ||||||||||| ||||| || ||||| | ||||||||||||||||||||| Sbjct: 52875 tccaccgccattactgtctcaaacaatttcttcacccaccacaatgaggt 52826 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 281 aggcatggttacttccatgtggtgaacaatgactacactcactgggagatgta 333 |||||||| || |||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 52545 aggcatggatatttccatgtagttaacaatgactacactcattgggaaatgta 52493
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2 Length = 92611 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 356 ccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgccaaggag 415 ||||| || ||||| ||||| ||||||||| ||| ||||||||||| |||||||||||| Sbjct: 40669 ccgactattaacagtcagggtaaccgctacaccgccccaaccaacccgtttgccaaggag 40728 Query: 416 gt 417 || Sbjct: 40729 gt 40730
>dbj|AB028621.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUJ8 Length = 78921 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtac 334 ||||||||||||||||| ||||||||||| ||||| || ||||| || ||| | ||||| Sbjct: 73508 aggtgcaggcatggttatttccatgtggttaacaacgattacacacattggaaaatgtat 73567 Query: 335 gccatcggaggaag 348 || || |||||||| Sbjct: 73568 gctattggaggaag 73581 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 239 aaccatttcggggaagggctcatccagaggatgccaaggt 278 |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 73384 aaccattttggagaagggctcatacagagaatgccaaggt 73423
>dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDC12 Length = 81662 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtac 334 ||||| || ||||| || ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 50227 aggtgtagacatggatatttccatgtggtgaacaatgactatacacattgggaaatgtat 50168 Query: 335 gccatcggaggaag 348 || || |||||||| Sbjct: 50167 gcaattggaggaag 50154
>emb|X67159.1|NTPECL2 N.tabacum mRNA for pectate lyase Length = 967 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 293 ttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagc 349 |||||| |||||||||||||||||||||| ||||| | |||||| || || |||||| Sbjct: 664 ttccatctggtgaacaatgactacactcattgggaaaggtacgctattgggggaagc 720
>emb|X61101.1|NTPTLMR N.tabacum mRNA for pectate lyase (partial) Length = 967 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 293 ttccatgtggtgaacaatgactacactcactgggagatgtacgccatcggaggaagc 349 |||||| |||||||||||||||||||||| ||||| | |||||| || || |||||| Sbjct: 664 ttccatctggtgaacaatgactacactcattgggaaaggtacgctattgggggaagc 720
>gb|AC141435.28| Medicago truncatula clone mth2-21i11, complete sequence Length = 132497 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 281 aggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgccatc 340 |||||||| || || ||||||||||||||||||||||| || ||| ||||| ||||| Sbjct: 117356 aggcatggatattttcatgtggtgaacaatgactacacacattggagaatgtatgccata 117297 Query: 341 ggaggaag 348 |||||||| Sbjct: 117296 ggaggaag 117289
>emb|CT030174.3| M.truncatula DNA sequence from clone MTH2-71J12 on chromosome 3, complete sequence Length = 133240 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 281 aggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtacgccatc 340 |||||||| || || ||||||||||||||||||||||| || ||| ||||| ||||| Sbjct: 86197 aggcatggatattttcatgtggtgaacaatgactacacacattggagaatgtatgccata 86256 Query: 341 ggaggaag 348 |||||||| Sbjct: 86257 ggaggaag 86264
>gb|L20140.1|MZEALLERGB Zea mays pectate lyase homolog gene, complete cds Length = 1979 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 292 cttccatgtggtgaacaatgactacactcactgggagatgtacgccatcgg 342 |||||| ||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 1221 cttccacgtggtgaacaacgactacacgcactggatcatgtacgccatcgg 1271
>gb|AY109459.1| Zea mays CL2557_1 mRNA sequence Length = 1578 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 292 cttccatgtggtgaacaatgactacactcactgggagatgtacgccatcgg 342 |||||| ||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 972 cttccacgtggtgaacaacgactacacgcactggatcatgtacgccatcgg 1022
>ref|NM_121515.1| Arabidopsis thaliana lyase/ pectate lyase AT5G15110 mRNA, complete cds Length = 1419 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgtacgccatcggagg 345 ||||| |||||||| ||||||||||| |||||| | ||||| |||||||| Sbjct: 1072 catgttgtgaacaacgactacactcattgggagctttacgcgatcggagg 1121
>ref|NM_101309.3| Arabidopsis thaliana AT59; lyase/ pectate lyase AT1G14420 (AT59) mRNA, complete cds Length = 1445 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1021 catgtggtgaacaatgactacacacattgggaaatgta 1058
>gb|BT010451.1| Arabidopsis thaliana At1g14420 mRNA, complete cds Length = 1380 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1021 catgtggtgaacaatgactacacacattgggaaatgta 1058
>emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F2G14 (ESSA project) Length = 85992 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgtacgccatcggagg 345 ||||| |||||||| ||||||||||| |||||| | ||||| |||||||| Sbjct: 82005 catgttgtgaacaacgactacactcattgggagctttacgcgatcggagg 82054
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project) Length = 103996 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgtacgccatcggagg 345 ||||| |||||||| ||||||||||| |||||| | ||||| |||||||| Sbjct: 1168 catgttgtgaacaacgactacactcattgggagctttacgcgatcggagg 1217
>dbj|AK176136.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-94-K12 Length = 1751 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1131 catgtggtgaacaatgactacacacattgggaaatgta 1168
>dbj|AK176113.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-90-P17 Length = 1753 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1131 catgtggtgaacaatgactacacacattgggaaatgta 1168
>dbj|AK175980.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-67-L16 Length = 1753 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1131 catgtggtgaacaatgactacacacattgggaaatgta 1168
>dbj|AK175891.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-53-J03 Length = 1778 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1131 catgtggtgaacaatgactacacacattgggaaatgta 1168
>dbj|AK175847.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-46-H19 Length = 1635 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1131 catgtggtgaacaatgactacacacattgggaaatgta 1168
>dbj|AK175801.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-39-E14 Length = 1751 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1131 catgtggtgaacaatgactacacacattgggaaatgta 1168
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 63282 catgtggtgaacaatgactacacacattgggaaatgta 63245
>gb|U83619.1|ATU83619 Arabidopsis thaliana putative pectate lyase (At59) gene, complete cds Length = 3702 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||||||||| || ||||| ||||| Sbjct: 3152 catgtggtgaacaatgactacacacattgggaaatgta 3189
>ref|NM_124267.2| Arabidopsis thaliana lyase/ pectate lyase AT5G48900 mRNA, complete cds Length = 1540 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Plus Query: 242 catttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtg 301 ||||| || ||||| || || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 962 cattttggtgaaggtcttattcagagaatgccgaggtgtaggcatggatattttcatgta 1021 Query: 302 gtgaacaatgactacactcactgggagatgtacgccatcgg 342 || ||||||||||| || || ||||| ||||| || ||||| Sbjct: 1022 gttaacaatgactatacacattgggaaatgtatgcgatcgg 1062
>gb|AY050795.1| Arabidopsis thaliana putative pectate lyase (At5g48900) mRNA, complete cds Length = 1556 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Plus Query: 242 catttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtg 301 ||||| || ||||| || || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 962 cattttggtgaaggtcttattcagagaatgccgaggtgtaggcatggatattttcatgta 1021 Query: 302 gtgaacaatgactacactcactgggagatgtacgccatcgg 342 || ||||||||||| || || ||||| ||||| || ||||| Sbjct: 1022 gttaacaatgactatacacattgggaaatgtatgcgatcgg 1062
>gb|AY050404.1| Arabidopsis thaliana AT5g48900/K19E20_1 mRNA, complete cds Length = 1525 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Plus Query: 242 catttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtg 301 ||||| || ||||| || || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 962 cattttggtgaaggtcttattcagagaatgccgaggtgtaggcatggatattttcatgta 1021 Query: 302 gtgaacaatgactacactcactgggagatgtacgccatcgg 342 || ||||||||||| || || ||||| ||||| || ||||| Sbjct: 1022 gttaacaatgactatacacattgggaaatgtatgcgatcgg 1062
>emb|BX832487.1|CNS09ZRC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH76ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1435 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Plus Query: 242 catttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtg 301 ||||| || ||||| || || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 932 cattttggtgaaggtcttattcagagaatgccgaggtgtaggcatggatattttcatgta 991 Query: 302 gtgaacaatgactacactcactgggagatgtacgccatcgg 342 || ||||||||||| || || ||||| ||||| || ||||| Sbjct: 992 gttaacaatgactatacacattgggaaatgtatgcgatcgg 1032 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 tccaacaactacttcacccaccacaatgaggt 174 ||||| || |||||||| |||||||||||||| Sbjct: 834 tccaataattacttcacacaccacaatgaggt 865
>gb|AY086099.1| Arabidopsis thaliana clone 21311 mRNA, complete sequence Length = 1523 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Plus Query: 242 catttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtg 301 ||||| || ||||| || || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 962 cattttggtgaaggtcttattcagagaatgccgaggtgtaggcatggatattttcatgta 1021 Query: 302 gtgaacaatgactacactcactgggagatgtacgccatcgg 342 || ||||||||||| || || ||||| ||||| || ||||| Sbjct: 1022 gttaacaatgactatacacattgggaaatgtatgcgatcgg 1062
>emb|Z17328.1|LLPECLYS Lilium longiflorum encoding putative pectate lyase Length = 1546 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Plus Query: 263 cagaggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacactcac 322 |||||||||||||||||| | |||| | | ||||| |||||||| |||||||||||| Sbjct: 1000 cagaggatgccaaggtgccgttatggatttgtgcatgtcgtgaacaacgactacactcac 1059 Query: 323 tgg 325 ||| Sbjct: 1060 tgg 1062
>emb|X15500.1|LELAT56G Tomato LAT56 gene for protein P56 Length = 1440 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 293 ttccatgtggtgaacaatgactacactcactggga 327 |||||| ||||||||||||| |||||||| ||||| Sbjct: 915 ttccatctggtgaacaatgattacactcattggga 949
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 246 tcggggaagggctcatccagaggatgc 272 |||||||||||||||||||| |||||| Sbjct: 2459985 tcggggaagggctcatccagcggatgc 2460011
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 91 ctgcgccgacggcctcatcgacg 113 ||||||||||||||||||||||| Sbjct: 95889 ctgcgccgacggcctcatcgacg 95911
>gb|L18911.1|LILPECTLYA Lilium longiflorum potential pectate lyase mRNA, complete cds Length = 1540 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Plus Query: 263 cagaggatgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacactcac 322 |||||||||||||||||| | |||| | | ||||| |||||||| |||||||||||| Sbjct: 1000 cagaggatgccaaggtgccgttatggatttgtgcatgtcgtgaacaacgactacactcac 1059 Query: 323 tgg 325 ||| Sbjct: 1060 tgg 1062
>ref|NM_110993.2| Arabidopsis thaliana lyase/ pectate lyase AT3G01270 mRNA, complete cds Length = 1809 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 305 aacaatgactacactcactgggagatgtacgccatcgg 342 ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1267 aacaatgactacactcattgggagctttacgcgatcgg 1304 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 atcgacgccatcatgggttccaccgccatcac 138 |||||||| || |||||||||||||| ||||| Sbjct: 1069 atcgacgctataatgggttccaccgcaatcac 1100
>gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence, complete sequence Length = 93735 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 305 aacaatgactacactcactgggagatgtacgccatcgg 342 ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 13858 aacaatgactacactcattgggagctttacgcgatcgg 13895 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 atcgacgccatcatgggttccaccgccatcac 138 |||||||| || |||||||||||||| ||||| Sbjct: 13562 atcgacgctataatgggttccaccgcaatcac 13593
>gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome III BAC T22N4 genomic sequence, complete sequence Length = 58448 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 305 aacaatgactacactcactgggagatgtacgccatcgg 342 ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 55504 aacaatgactacactcattgggagctttacgcgatcgg 55541 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 atcgacgccatcatgggttccaccgccatcac 138 |||||||| || |||||||||||||| ||||| Sbjct: 55208 atcgacgctataatgggttccaccgcaatcac 55239
>dbj|AK221131.1| Arabidopsis thaliana mRNA for pectate lyase like protein, complete cds, clone: RAFL22-92-L09 Length = 667 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 305 aacaatgactacactcactgggagatgtacgccatcgg 342 ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 222 aacaatgactacactcattgggagctttacgcgatcgg 259 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 atcgacgccatcatgggttccaccgccatcac 138 |||||||| || |||||||||||||| ||||| Sbjct: 24 atcgacgctataatgggttccaccgcaatcac 55
>emb|BX822786.1|CNS0A4UR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB64ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 879 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 305 aacaatgactacactcactgggagatgtacgccatcgg 342 ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 346 aacaatgactacactcattgggagctttacgcgatcgg 383 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 atcgacgccatcatgggttccaccgccatcac 138 |||||||| || |||||||||||||| ||||| Sbjct: 148 atcgacgctataatgggttccaccgcaatcac 179
>emb|BX828617.1|CNS0A2K0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL22ZD05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 804 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 269 atgccaaggtgcaggcatggttactt 294 |||||||||||||||||||| ||||| Sbjct: 258 atgccaaggtgcaggcatggatactt 283
>gb|BT004191.1| Arabidopsis thaliana clone RAFL15-38-P13 (R50134) At3g01270 mRNA, complete sequence Length = 1719 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 305 aacaatgactacactcactgggagatgtacgccatcgg 342 ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1261 aacaatgactacactcattgggagctttacgcgatcgg 1298 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 atcgacgccatcatgggttccaccgccatcac 138 |||||||| || |||||||||||||| ||||| Sbjct: 1064 atcgacgctataatgggttccaccgcaatcac 1095
>gb|AY084341.1| Arabidopsis thaliana clone 104915 mRNA, complete sequence Length = 1812 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 305 aacaatgactacactcactgggagatgtacgccatcgg 342 ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1269 aacaatgactacactcattgggagctttacgcgatcgg 1306 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 atcgacgccatcatgggttccaccgccatcac 138 |||||||| || |||||||||||||| ||||| Sbjct: 1071 atcgacgctataatgggttccaccgcaatcac 1102
>emb|CT010481.8| M.truncatula DNA sequence from clone MTH2-62G7 on chromosome 3, complete sequence Length = 113400 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgta 333 ||||||||||||||||| ||||| || ||||| ||||| Sbjct: 10733 catgtggtgaacaatgattacacacattgggaaatgta 10770
>gb|U83622.1|ATU83622 Arabidopsis thaliana putative pectate lyase (A11) gene, partial cds Length = 851 Score = 44.1 bits (22), Expect = 0.40 Identities = 49/58 (84%) Strand = Plus / Plus Query: 117 tcatgggttccaccgccatcactgtgtccaacaactacttcacccaccacaatgaggt 174 |||||||||| || || || || || ||||| ||| |||| ||||||||||||||||| Sbjct: 491 tcatgggttctactgctattaccgtttccaataaccactttacccaccacaatgaggt 548 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggt 303 |||||||| ||||| |||||||||||||| Sbjct: 819 aggtgcagacatgggtacttccatgtggt 847
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ccatcgccgacggcgacgccg 38 ||||||||||||||||||||| Sbjct: 2922888 ccatcgccgacggcgacgccg 2922908 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caccatcgccgacggcgacg 35 |||||||||||||||||||| Sbjct: 1073404 caccatcgccgacggcgacg 1073385
>emb|CR382279.1| M.truncatula DNA sequence from clone MTH2-15G18 on chromosome 3, complete sequence Length = 140041 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 tacttccatgtggtgaacaatgactacac 318 ||||| ||||||||||||||||| ||||| Sbjct: 86084 tactttcatgtggtgaacaatgattacac 86112
>ref|XM_852226.1| PREDICTED: Canis familiaris similar to nucleoporin 133kDa, transcript variant 2 (LOC479208), mRNA Length = 3659 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 tcctacctcaaggacaaggca 217 ||||||||||||||||||||| Sbjct: 756 tcctacctcaaggacaaggca 776
>ref|XM_536351.2| PREDICTED: Canis familiaris similar to nucleoporin 133kDa, transcript variant 1 (LOC479208), mRNA Length = 4062 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 tcctacctcaaggacaaggca 217 ||||||||||||||||||||| Sbjct: 756 tcctacctcaaggacaaggca 776
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ccatcgccgacggcgacgccg 38 ||||||||||||||||||||| Sbjct: 4126051 ccatcgccgacggcgacgccg 4126071
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ccatcgccgacggcgacgccg 38 ||||||||||||||||||||| Sbjct: 4532636 ccatcgccgacggcgacgccg 4532656
>gb|L20139.1|MZEALLERGA Zea mays pectate lyase homolog mRNA, partial cds Length = 637 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 329 atgtacgccatcggaggaagcgccgagccgaccatcaacagccaggggaaccgctac 385 ||||||||||| || || ||| || ||| ||||||| ||||||||| ||||||||| Sbjct: 15 atgtacgccattggcggcggcgacgcgccaaccatcatcagccagggcaaccgctac 71
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 gccgacggcgacgccgtctcc 43 ||||||||||||||||||||| Sbjct: 3985983 gccgacggcgacgccgtctcc 3986003
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gccgacggcgacgccgtctcc 43 ||||||||||||||||||||| Sbjct: 63902 gccgacggcgacgccgtctcc 63882
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 cgcaccatcgccgacggcgac 34 ||||||||||||||||||||| Sbjct: 2218409 cgcaccatcgccgacggcgac 2218429
>ref|NM_105443.3| Arabidopsis thaliana pectate lyase AT1G67750 mRNA, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 6.2 Identities = 50/60 (83%) Strand = Plus / Plus Query: 58 ccacgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccat 117 |||||| ||||| ||||| ||||| | ||||||||||| ||||| || || |||||||| Sbjct: 720 ccacgtgtgggtagaccattgctcgttgtccaactgcgctgacggtctgatagacgccat 779
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ggtggcgcaccatcgccgac 28 |||||||||||||||||||| Sbjct: 3029394 ggtggcgcaccatcgccgac 3029375
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 catcgccgacggcgacgccg 38 |||||||||||||||||||| Sbjct: 48225 catcgccgacggcgacgccg 48244
>ref|XM_361874.1| Magnaporthe grisea 70-15 hypothetical protein (MG04348.4) partial mRNA Length = 1539 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 acgtctgggtcgaccactgc 79 |||||||||||||||||||| Sbjct: 941 acgtctgggtcgaccactgc 960
>ref|NM_144884.1| Mus musculus torsin family 1, member A (torsin A) (Tor1a), mRNA Length = 1397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 578 cggcctcatcgacgccatca 597
>ref|NM_153303.2| Rattus norvegicus dystonia 1 (Dyt1), mRNA Length = 1401 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 572 cggcctcatcgacgccatca 591
>gb|AE009266.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 36 of 187 of the complete sequence Length = 12013 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ggcgacgccgtctccatcttcggc 52 |||||||||||||||||| ||||| Sbjct: 1732 ggcgacgccgtctccatcatcggc 1755
>gb|AE008346.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 150 of 187 of the complete sequence Length = 10718 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 ggcgacgccgtctccatcttcggc 52 |||||||||||||||||| ||||| Sbjct: 5377 ggcgacgccgtctccatcatcggc 5354
>gb|AY341993.1| Drosophila miranda CG6461 gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 acggcgacgccgtctccatc 46 |||||||||||||||||||| Sbjct: 78 acggcgacgccgtctccatc 59
>gb|AY485821.1| Sebastes caurinus proglucagon I gene, complete cds Length = 2491 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ctcctacctcaaggacaaggcaat 219 |||||||||||||||| ||||||| Sbjct: 1689 ctcctacctcaaggaccaggcaat 1712
>gb|AY485810.1| Sebastes caurinus Brockmann body proglucagon I mRNA, complete cds Length = 644 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ctcctacctcaaggacaaggcaat 219 |||||||||||||||| ||||||| Sbjct: 348 ctcctacctcaaggaccaggcaat 371
>gb|AY485809.1| Sebastes caurinus intestine proglucagon I mRNA, complete cds Length = 952 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ctcctacctcaaggacaaggcaat 219 |||||||||||||||| ||||||| Sbjct: 348 ctcctacctcaaggaccaggcaat 371
>ref|XM_389467.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09291.1) partial mRNA Length = 987 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 acgtctgggtcgaccactgc 79 |||||||||||||||||||| Sbjct: 431 acgtctgggtcgaccactgc 450
>ref|XM_788835.1| PREDICTED: Strongylocentrotus purpuratus similar to apical early endosomal glycoprotein (LOC589186), mRNA Length = 3600 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ggtcaccatagctttcaaccattt 246 ||||||||| |||||||||||||| Sbjct: 2193 ggtcaccatggctttcaaccattt 2170
>emb|AL356299.16| Human DNA sequence from clone CTD-3216D2 on chromosome 20 Contains the AHCY gene encoding S-adenosylhomocysteine hydrolase, the 5' end of the ITCH gene for itchy homolog E3 ubiquitin protein ligase (mouse), the CDC42P1 gene for cell division cycle 42 pseudogene 1, a pseudogene similar to part of laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) and two CpG islands, complete sequence Length = 152334 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tcacagtgactcctacctca 206 |||||||||||||||||||| Sbjct: 81366 tcacagtgactcctacctca 81385
>gb|DQ397849.1| Cenarchaeum symbiosum clone C08E01, complete sequence Length = 37303 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgacggcgacgccgtctccat 45 ||||||||||||||||| |||||| Sbjct: 3102 cgccgacggcgacgccgactccat 3079
>gb|DQ397835.1| Cenarchaeum symbiosum clone C02G05, complete sequence Length = 44971 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgacggcgacgccgtctccat 45 ||||||||||||||||| |||||| Sbjct: 38678 cgccgacggcgacgccgactccat 38655
>gb|AY101535.1| Arabidopsis thaliana At1g67750/F12A21_12 mRNA, complete cds Length = 1227 Score = 40.1 bits (20), Expect = 6.2 Identities = 50/60 (83%) Strand = Plus / Plus Query: 58 ccacgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccat 117 |||||| ||||| ||||| ||||| | ||||||||||| ||||| || || |||||||| Sbjct: 648 ccacgtgtgggtagaccattgctcgttgtccaactgcgctgacggtctgatagacgccat 707
>dbj|AK160361.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930031C11 product:dystonia 1, full insert sequence Length = 1408 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 554 cggcctcatcgacgccatca 573
>gb|AF462797.1|AF462797 Arabidopsis thaliana At1g67750/F12A21_12 mRNA, complete cds Length = 1618 Score = 40.1 bits (20), Expect = 6.2 Identities = 50/60 (83%) Strand = Plus / Plus Query: 58 ccacgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccat 117 |||||| ||||| ||||| ||||| | ||||||||||| ||||| || || |||||||| Sbjct: 719 ccacgtgtgggtagaccattgctcgttgtccaactgcgctgacggtctgatagacgccat 778
>dbj|AK079728.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430041E06 product:torsin family 1, member A, full insert sequence Length = 1606 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 870 cggcctcatcgacgccatca 889
>dbj|AK038891.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230072L11 product:torsin family 1, member A, full insert sequence Length = 1344 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 556 cggcctcatcgacgccatca 575
>dbj|AK082936.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430047K18 product:TORSIN A PRECURSOR homolog [Mus musculus], full insert sequence Length = 1281 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 508 cggcctcatcgacgccatca 527
>emb|BX831295.1|CNS09ZFG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1488 Score = 40.1 bits (20), Expect = 6.2 Identities = 74/92 (80%) Strand = Plus / Plus Query: 251 gaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtggtgaacaat 310 ||||| ||||| ||||| ||||| ||||| |||||||| | | ||||| || |||||| Sbjct: 960 gaaggtctcattcagagaatgccgaggtgtaggcatggacattctcatgtagttaacaat 1019 Query: 311 gactacactcactgggagatgtacgccatcgg 342 ||||| || || ||||| ||||| || ||||| Sbjct: 1020 gactatacacattgggaaatgtatgcgatcgg 1051
>gb|AC008113.4|AC008113 Genomic sequence for Arabidopsis thaliana BAC F12A21 from chromosome I, complete sequence Length = 114190 Score = 40.1 bits (20), Expect = 6.2 Identities = 50/60 (83%) Strand = Plus / Minus Query: 58 ccacgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccat 117 |||||| ||||| ||||| ||||| | ||||||||||| ||||| || || |||||||| Sbjct: 40966 ccacgtgtgggtagaccattgctcgttgtccaactgcgctgacggtctgatagacgccat 40907
>gb|AY088778.1| Arabidopsis thaliana clone 94849 mRNA, complete sequence Length = 1617 Score = 40.1 bits (20), Expect = 6.2 Identities = 50/60 (83%) Strand = Plus / Plus Query: 58 ccacgtctgggtcgaccactgctccctctccaactgcgccgacggcctcatcgacgccat 117 |||||| ||||| ||||| ||||| | ||||||||||| ||||| || || |||||||| Sbjct: 720 ccacgtgtgggtagaccattgctcgttgtccaactgcgctgacggtctgatagacgccat 779
>dbj|AB127391.1| Camelus dromedarius ANP mRNA for atrial natriuretic peptide, complete cds Length = 830 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 acgccatcatgggttccaccgccatcactgtg 142 |||||| |||||| ||| |||||||||||||| Sbjct: 77 acgccagcatgggctcctccgccatcactgtg 108
>emb|AL844532.18| Mouse DNA sequence from clone RP23-221O14 on chromosome 2, complete sequence Length = 207432 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 194794 cggcctcatcgacgccatca 194775
>dbj|AP000740.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MSD24 Length = 40018 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 239 aaccatttcggggaagggctcatccagaggatgccaaggt 278 |||||||| ||||||||||| || ||||| ||||| |||| Sbjct: 18433 aaccattttggggaagggcttatacagagaatgccgaggt 18394
>dbj|AB017061.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E20 Length = 61712 Score = 40.1 bits (20), Expect = 6.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 275 aggtgcaggcatggttacttccatgtggtgaacaatgactacactcactgggagatgtac 334 ||||| |||||||| || || ||||| || ||||||||||| || || ||||| ||||| Sbjct: 4468 aggtgtaggcatggatattttcatgtagttaacaatgactatacacattgggaaatgtat 4527 Query: 335 gccatcgg 342 || ||||| Sbjct: 4528 gcgatcgg 4535 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 tccaacaactacttcacccaccacaatgaggt 174 ||||| || |||||||| |||||||||||||| Sbjct: 4173 tccaataattacttcacacaccacaatgaggt 4204
>gb|AF156985.1|AF156985 Colletotrichum gloeosporioides f. sp. malvae pectate lyase 2 (pel-2) mRNA, complete cds Length = 1146 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 acgtctgggtcgaccactgc 79 |||||||||||||||||||| Sbjct: 496 acgtctgggtcgaccactgc 515
>emb|AJ323804.1|HSA323804 Homo sapiens genomic sequence surrounding NotI site, clone NB1-621C Length = 1378 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ggggaaccgctacctcgcgccaac 396 ||||||||||| |||||||||||| Sbjct: 62 ggggaaccgctccctcgcgccaac 39
>gb|BC078714.1| Rattus norvegicus dystonia 1, mRNA (cDNA clone MGC:93134 IMAGE:7134604), complete cds Length = 1401 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 572 cggcctcatcgacgccatca 591
>gb|BC017683.1| Mus musculus torsin family 1, member A (torsin A), mRNA (cDNA clone MGC:18883 IMAGE:4238480), complete cds Length = 1397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 578 cggcctcatcgacgccatca 597
>gb|U95924.1|NTU95924 Nicotiana tabacum putative pectate lyase Nt59 (Nt59) mRNA, partial cds Length = 541 Score = 40.1 bits (20), Expect = 6.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 296 catgtggtgaacaatgactacactcactgggagatgtacgccat 339 ||||| || ||||||||||| ||||||||| | ||||| ||||| Sbjct: 169 catgttgttaacaatgactatactcactggaatatgtatgccat 212
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 gaccgcccagaccacatgga 452 |||||||||||||||||||| Sbjct: 1017101 gaccgcccagaccacatgga 1017082
>emb|AJ298841.1|MMU298841 Mus musculus mRNA for torsinA protein Length = 1339 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcctcatcgacgccatca 119 |||||||||||||||||||| Sbjct: 553 cggcctcatcgacgccatca 572 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,251,354 Number of Sequences: 3902068 Number of extensions: 3251354 Number of successful extensions: 61807 Number of sequences better than 10.0: 190 Number of HSP's better than 10.0 without gapping: 193 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 60631 Number of HSP's gapped (non-prelim): 1160 length of query: 459 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 437 effective length of database: 17,147,199,772 effective search space: 7493326300364 effective search space used: 7493326300364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
