ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet47c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479974.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1700 Score = 145 bits (73), Expect = 1e-31 Identities = 121/137 (88%) Strand = Plus / Plus Query: 300 tcgcgaggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggaga 359 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||| || |||| Sbjct: 273 tcgcgaggcccgacgcgttcgggaggttcgggaagttcgggggcaagtacgtgcccgaga 332 Query: 360 ctctcatgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgagg 419 | || ||||| || |||||||||||||||||||| ||||| || ||||||| |||||| | Sbjct: 333 cgctgatgcatgcgctcaccgagctcgaggccgcgttccatgccctcgccggcgacgaag 392 Query: 420 acttccagagagaactt 436 | ||||||| ||||||| Sbjct: 393 atttccagaaagaactt 409
>dbj|AK072535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133G14, full insert sequence Length = 1700 Score = 145 bits (73), Expect = 1e-31 Identities = 121/137 (88%) Strand = Plus / Plus Query: 300 tcgcgaggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggaga 359 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||| || |||| Sbjct: 273 tcgcgaggcccgacgcgttcgggaggttcgggaagttcgggggcaagtacgtgcccgaga 332 Query: 360 ctctcatgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgagg 419 | || ||||| || |||||||||||||||||||| ||||| || ||||||| |||||| | Sbjct: 333 cgctgatgcatgcgctcaccgagctcgaggccgcgttccatgccctcgccggcgacgaag 392 Query: 420 acttccagagagaactt 436 | ||||||| ||||||| Sbjct: 393 atttccagaaagaactt 409
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 300 tcgcgaggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggaga 359 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||| || |||| Sbjct: 2023659 tcgcgaggcccgacgcgttcgggaggttcgggaagttcgggggcaagtacgtgcccgaga 2023718 Query: 360 ctctcatgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgagg 419 | || ||||| || |||||||||||||||||||| ||||| || ||||||| |||||| | Sbjct: 2023719 cgctgatgcatgcgctcaccgagctcgaggccgcgttccatgccctcgccggcgacgaag 2023778 Query: 420 acttccag 427 | |||||| Sbjct: 2023779 atttccag 2023786 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||||||||||| ||||| Sbjct: 27965827 gccgccgccgtctccgcgccaccgcc 27965852
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 300 tcgcgaggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggaga 359 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||| || |||| Sbjct: 17189 tcgcgaggcccgacgcgttcgggaggttcgggaagttcgggggcaagtacgtgcccgaga 17248 Query: 360 ctctcatgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgagg 419 | || ||||| || |||||||||||||||||||| ||||| || ||||||| |||||| | Sbjct: 17249 cgctgatgcatgcgctcaccgagctcgaggccgcgttccatgccctcgccggcgacgaag 17308 Query: 420 acttccag 427 | |||||| Sbjct: 17309 atttccag 17316
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 300 tcgcgaggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggaga 359 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||| || |||| Sbjct: 148857 tcgcgaggcccgacgcgttcgggaggttcgggaagttcgggggcaagtacgtgcccgaga 148916 Query: 360 ctctcatgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgagg 419 | || ||||| || |||||||||||||||||||| ||||| || ||||||| |||||| | Sbjct: 148917 cgctgatgcatgcgctcaccgagctcgaggccgcgttccatgccctcgccggcgacgaag 148976 Query: 420 acttccag 427 | |||||| Sbjct: 148977 atttccag 148984
>gb|M76685.1|MZEORP2A Zea mays tryptophan synthase beta-subunit (TSB2) mRNA, complete cds Length = 1540 Score = 119 bits (60), Expect = 8e-24 Identities = 114/132 (86%) Strand = Plus / Plus Query: 304 gaggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggagactct 363 |||||||||||| | || |||||||| | |||| | |||||||||||||| ||||| || Sbjct: 140 gaggcccgacgccatgggcaggttcgggaggttcggcggcaagtacgtccccgagacgct 199 Query: 364 catgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgaggactt 423 ||||||||| ||||||||||||||| ||||||||||||||||||| |||||| || || Sbjct: 200 catgcacgcgctcaccgagctcgagagcgccttccacgcgctcgccaccgacgacgagtt 259 Query: 424 ccagagagaact 435 ||||| |||||| Sbjct: 260 ccagaaagaact 271
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 304 gaggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggagactct 363 |||||||||||| | ||||||||||| |||||| | || ||||| ||||| ||||| || Sbjct: 70193 gaggcccgacgccatggggaggttcgggaagttcggcgggaagtatgtccccgagacgct 70134 Query: 364 catgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgaggactt 423 ||||||||| ||||||||||||||| ||||||||||||||||||| |||||| || || Sbjct: 70133 catgcacgcgctcaccgagctcgagaacgccttccacgcgctcgccaccgacgaagagtt 70074 Query: 424 ccag 427 |||| Sbjct: 70073 ccag 70070 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 213 caatgcggccggtcaaggcggtggcggcggaggcgccctcccccg 257 |||||| ||||| |||||||||||| ||||||||| | ||||||| Sbjct: 70278 caatgcagccggccaaggcggtggccgcggaggcggcgtcccccg 70234
>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence Length = 144792 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 304 gaggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggagactct 363 |||||||||||| | || |||||||| | |||| | |||||||||||||| ||||| || Sbjct: 75053 gaggcccgacgccatgggcaggttcgggaggttcggcggcaagtacgtccccgagacgct 74994 Query: 364 catgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgaggactt 423 ||||||||| ||||||||||||||| ||||||||||||||||||| |||||| || || Sbjct: 74993 catgcacgcgctcaccgagctcgagagcgccttccacgcgctcgccaccgacgacgagtt 74934 Query: 424 ccag 427 |||| Sbjct: 74933 ccag 74930
>gb|AY104030.1| Zea mays PCO122526 mRNA sequence Length = 1434 Score = 109 bits (55), Expect = 8e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 306 ggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggagactctca 365 |||||||||| | |||||||| || | |||| | |||||||||||||| ||||| |||| Sbjct: 26 ggcccgacgccatggggaggtttgggaggttcggcggcaagtacgtccccgagacgctca 85 Query: 366 tgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgaggacttcc 425 ||||||| ||||||||||||||| |||||||||||| |||||| |||||| || |||| Sbjct: 86 tgcacgcgctcaccgagctcgagaacgccttccacgcactcgccaccgacgacgagttcc 145 Query: 426 agagagaactt 436 ||| ||||||| Sbjct: 146 agaaagaactt 156
>gb|M76684.1|MZEORP1A Zea mays tryptophan synthase beta-subunit (TSB1) mRNA, complete cds Length = 1382 Score = 103 bits (52), Expect = 5e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 341 ggcaagtacgtcccggagactctcatgcacgccctcaccgagctcgaggccgccttccac 400 |||||||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||| Sbjct: 13 ggcaagtacgtccccgagacgctcatgcacgcgctcaccgagctcgagaacgccttccac 72 Query: 401 gcgctcgccgacgacgaggacttccagagagaactt 436 || |||||| |||||| || ||||||| ||||||| Sbjct: 73 gcactcgccaccgacgacgagttccagaaagaactt 108
>gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence Length = 181627 Score = 99.6 bits (50), Expect = 7e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 306 ggcccgacgcgctcgggaggttcggcaagttcaggggcaagtacgtcccggagactctca 365 |||||||||| | |||||||| || | |||| | |||||||||||||| ||||| |||| Sbjct: 81301 ggcccgacgccatggggaggtttgggaggttcggcggcaagtacgtccccgagacgctca 81242 Query: 366 tgcacgccctcaccgagctcgaggccgccttccacgcgctcgccgacgacgaggacttcc 425 ||||||| ||||||||||||||| |||||||||||| |||||| |||||| || |||| Sbjct: 81241 tgcacgcgctcaccgagctcgagaacgccttccacgcactcgccaccgacgacgagttcc 81182 Query: 426 ag 427 || Sbjct: 81181 ag 81180
>ref|NM_118841.2| Arabidopsis thaliana TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT); tryptophan synthase AT4G27070 (TSB2) mRNA, complete cds Length = 1698 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 341 ggcaagtacgtcccggagactctcatgcacgccctcaccgagctcgaggccgccttccac 400 |||||||||||||| || ||||| |||||||||||| | || ||||| | || ||| | Sbjct: 341 ggcaagtacgtccccgaaactctaatgcacgccctctctgaactcgaaacggctttctat 400 Query: 401 gcgctcgccgacgacgaggacttccagagagaa 433 |||||||| |||||| || |||||||||||| Sbjct: 401 tcgctcgccaccgacgaagatttccagagagaa 433
>gb|BT003144.1| Arabidopsis thaliana At4g27070 mRNA, complete cds Length = 1428 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 341 ggcaagtacgtcccggagactctcatgcacgccctcaccgagctcgaggccgccttccac 400 |||||||||||||| || ||||| |||||||||||| | || ||||| | || ||| | Sbjct: 271 ggcaagtacgtccccgaaactctaatgcacgccctctctgaactcgaaacggctttctat 330 Query: 401 gcgctcgccgacgacgaggacttccagagagaa 433 |||||||| |||||| || |||||||||||| Sbjct: 331 tcgctcgccaccgacgaagatttccagagagaa 363
>gb|AY084334.1| Arabidopsis thaliana clone 104687 mRNA, complete sequence Length = 1677 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 341 ggcaagtacgtcccggagactctcatgcacgccctcaccgagctcgaggccgccttccac 400 |||||||||||||| || ||||| |||||||||||| | || ||||| | || ||| | Sbjct: 320 ggcaagtacgtccccgaaactctaatgcacgccctctctgaactcgaaacggctttctat 379 Query: 401 gcgctcgccgacgacgaggacttccagagagaa 433 |||||||| |||||| || |||||||||||| Sbjct: 380 tcgctcgccaccgacgaagatttccagagagaa 412
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 341 ggcaagtacgtcccggagactctcatgcacgccctc 376 |||||||||||||| || ||||| |||||||||||| Sbjct: 90689 ggcaagtacgtccccgaaactctaatgcacgccctc 90724
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 341 ggcaagtacgtcccggagactctcatgcacgccctc 376 |||||||||||||| || ||||| |||||||||||| Sbjct: 7178 ggcaagtacgtccccgaaactctaatgcacgccctc 7213
>gb|M81620.1|ATHTRPSB A.thaliana tryptophan synthase beta-subunit (TSB2) gene, complete cds Length = 3007 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 341 ggcaagtacgtcccggagactctcatgcacgccctc 376 |||||||||||||| || ||||| |||||||||||| Sbjct: 712 ggcaagtacgtccccgaaactctaatgcacgccctc 747
>ref|XM_507607.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA Length = 620 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||||||||||| ||||| Sbjct: 47 gccgccgccgtctccgcgccaccgcc 72
>ref|XM_507335.2| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA Length = 619 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||||||||||| ||||| Sbjct: 48 gccgccgccgtctccgcgccaccgcc 73
>ref|XM_483765.1| Oryza sativa (japonica cultivar-group), mRNA Length = 619 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||||||||||| ||||| Sbjct: 48 gccgccgccgtctccgcgccaccgcc 73
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 44.1 bits (22), Expect = 0.38 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 105 gaaaccctagccc-agccgccgccgtctcc 133 ||||||||||||| |||||||||||||||| Sbjct: 171128 gaaaccctagcccgagccgccgccgtctcc 171099
>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21, complete sequence Length = 132649 Score = 44.1 bits (22), Expect = 0.38 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 105 gaaaccctagccc-agccgccgccgtctcc 133 ||||||||||||| |||||||||||||||| Sbjct: 42862 gaaaccctagcccgagccgccgccgtctcc 42833
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||| ||||||||||||| Sbjct: 10994 gccgccgccgtcgccgcgcccccgcc 11019
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.38 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 105 gaaaccctagccc-agccgccgccgtctcc 133 ||||||||||||| |||||||||||||||| Sbjct: 20499383 gaaaccctagcccgagccgccgccgtctcc 20499354
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||||||||||| ||||| Sbjct: 43319 gccgccgccgtctccgcgccaccgcc 43344
>dbj|AK099010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F23, full insert sequence Length = 629 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||||||||||| ||||| Sbjct: 58 gccgccgccgtctccgcgccaccgcc 83
>dbj|AK068626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154N05, full insert sequence Length = 619 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||||||||||| ||||| Sbjct: 48 gccgccgccgtctccgcgccaccgcc 73
>dbj|AK059582.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B04, full insert sequence Length = 620 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||||||||||| ||||| Sbjct: 47 gccgccgccgtctccgcgccaccgcc 72
>gb|AY103721.1| Zea mays PCO130455 mRNA sequence Length = 1607 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 cgccgccgtctccgcgcccccg 142 |||||||||||||||||||||| Sbjct: 279 cgccgccgtctccgcgcccccg 300
>dbj|D45382.2|STMAFSK1 Streptomyces coelicolor genes for KbpA, afsK, orfB and afsS, complete cds Length = 8199 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gccgccgccgtctccgcgcccccgcc 144 |||||||||||| ||||||||||||| Sbjct: 2634 gccgccgccgtcgccgcgcccccgcc 2659
>ref|NM_001031070.1| Gallus gallus zinc finger and BTB domain containing 2 (ZBTB2), mRNA Length = 3463 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gccgccgccgtctccgcgccc 139 ||||||||||||||||||||| Sbjct: 151 gccgccgccgtctccgcgccc 131
>gb|U95743.1|HUU95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3, complete sequence Length = 192730 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 atttctttctctctgccactc 75 ||||||||||||||||||||| Sbjct: 191551 atttctttctctctgccactc 191531
>emb|AJ720645.1| Gallus gallus mRNA for hypothetical protein, clone 22k16 Length = 3463 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gccgccgccgtctccgcgccc 139 ||||||||||||||||||||| Sbjct: 151 gccgccgccgtctccgcgccc 131
>gb|AC099507.3| Homo sapiens chromosome 5 clone RP11-24H18, complete sequence Length = 187386 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ctgccttatttctttctctct 68 ||||||||||||||||||||| Sbjct: 19560 ctgccttatttctttctctct 19540
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 gccggtcaaggcggtggcggc 240 ||||||||||||||||||||| Sbjct: 3787151 gccggtcaaggcggtggcggc 3787171
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 gcagccaatggccgcctcggc 99 ||||||||||||||||||||| Sbjct: 3853529 gcagccaatggccgcctcggc 3853549
>gb|AC010362.6| Homo sapiens chromosome 5 clone CTD-2037I18, complete sequence Length = 133769 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ctgccttatttctttctctct 68 ||||||||||||||||||||| Sbjct: 104212 ctgccttatttctttctctct 104192
>gb|AC010429.6|AC010429 Homo sapiens chromosome 5 clone CTD-2199L14, complete sequence Length = 133769 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ctgccttatttctttctctct 68 ||||||||||||||||||||| Sbjct: 104212 ctgccttatttctttctctct 104192
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 ggcggtggcggcggaggcgcc 249 ||||||||||||||||||||| Sbjct: 27007336 ggcggtggcggcggaggcgcc 27007316 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 8992091 aggcggtggcggcggaggcg 8992110
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ctccgcgcccccgccctcccgcgcg 154 ||||||||||||| ||||||||||| Sbjct: 33607424 ctccgcgcccccgtcctcccgcgcg 33607400 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 38138607 gacgccgtcgtcccggagaggcgc 38138630 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 cgccgacgacgaggacttcc 425 |||||||||||||||||||| Sbjct: 37466370 cgccgacgacgaggacttcc 37466389 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcccagccgccgccgtctcc 133 |||||||||||||||||||| Sbjct: 34110876 gcccagccgccgccgtctcc 34110857
>gb|AC009173.9| Homo sapiens chromosome 16 clone RP11-99H5, complete sequence Length = 149842 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 atttctttctctctgccactc 75 ||||||||||||||||||||| Sbjct: 40653 atttctttctctctgccactc 40633
>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C02 Length = 80086 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ctccgcgcccccgccctcccgcgcg 154 ||||||||||||| ||||||||||| Sbjct: 22296 ctccgcgcccccgtcctcccgcgcg 22272
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 ggcggtggcggcggaggcgcc 249 ||||||||||||||||||||| Sbjct: 131097 ggcggtggcggcggaggcgcc 131077
>dbj|AK101086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024J15, full insert sequence Length = 1935 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ctccgcgcccccgccctcccgcgcg 154 ||||||||||||| ||||||||||| Sbjct: 169 ctccgcgcccccgtcctcccgcgcg 193
>gb|AF121895.1|AF121895 Cricetulus griseus dolichol-phosphate-mannose synthase (DPM1) mRNA, complete cds Length = 1255 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 ggcggtggcggcggaggcgcc 249 ||||||||||||||||||||| Sbjct: 234 ggcggtggcggcggaggcgcc 214
>gb|AC003982.1|AC003982 Homo sapiens PAC clone 166H1 from 12q, complete sequence Length = 122302 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 cgccgccgtctccgcgccccc 141 ||||||||||||||||||||| Sbjct: 98929 cgccgccgtctccgcgccccc 98909
>gb|AF042321.1|AF042321 Camptotheca acuminata tryptophan synthase beta (TSB) gene, complete cds Length = 9645 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 323 aggttcggcaagttcaggggcaagtacgtcccggagactctcatgcacgccctcaccgag 382 |||||||||||||| | || |||||||| || || || || ||| |||| ||||||||| Sbjct: 2363 aggttcggcaagtttggcgggaagtacgttcccgaaaccctaatgtacgctctcaccgag 2422 Query: 383 ctcga 387 ||||| Sbjct: 2423 ctcga 2427
>gb|AF042320.1|AF042320 Camptotheca acuminata tryptophan synthase beta subunit mRNA, complete cds Length = 1706 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 323 aggttcggcaagttcaggggcaagtacgtcccggagactctcatgcacgccctcaccgag 382 |||||||||||||| | || |||||||| || || || || ||| |||| ||||||||| Sbjct: 271 aggttcggcaagtttggcgggaagtacgttcccgaaaccctaatgtacgctctcaccgag 330 Query: 383 ctcga 387 ||||| Sbjct: 331 ctcga 335
>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete sequence Length = 126163 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggcggtggcggcggaggcgccctccccc 256 ||||| |||||||| ||||||||||||| Sbjct: 16927 ggcggcggcggcggcggcgccctccccc 16900
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 180244 aggcggtggcggcggaggcg 180263
>ref|XM_467661.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1794 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 cagccgccgccgtctccgcgcccccgcc 144 |||||||||||| ||||||| ||||||| Sbjct: 738 cagccgccgccgcctccgcgtccccgcc 711
>ref|NM_190142.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 489 gacgccgtcgtcccggagaggcgc 466
>ref|NM_190742.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 963 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cgccgacgacgaggacttcc 425 |||||||||||||||||||| Sbjct: 258 cgccgacgacgaggacttcc 239
>ref|NM_198889.1| Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 2, mRNA Length = 8637 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 2 aggcggtggcggcggaggcg 21
>ref|NM_032217.3| Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 1, mRNA Length = 9390 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 2 aggcggtggcggcggaggcg 21
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ggcggtggcggcggaggcgc 248 |||||||||||||||||||| Sbjct: 46419 ggcggtggcggcggaggcgc 46400
>gb|AC084295.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015K03, complete sequence Length = 89172 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggcggtggcggcggaggcgccctccccc 256 ||||| |||||||| ||||||||||||| Sbjct: 85965 ggcggcggcggcggcggcgccctccccc 85938
>gb|AC156576.3| Mus musculus BAC clone RP23-7C22 from chromosome 13, complete sequence Length = 205345 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tccctgccttatttctttctctct 68 |||||||||| ||||||||||||| Sbjct: 161461 tccctgccttctttctttctctct 161438
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 1203715 aggcggtggcggcggaggcg 1203696
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cgagctcgaggccgccttcc 398 |||||||||||||||||||| Sbjct: 3228087 cgagctcgaggccgccttcc 3228106
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgcgaggcccgacgcgctcg 320 |||||||||||||||||||| Sbjct: 1232363 cgcgaggcccgacgcgctcg 1232344 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccacgcgctcgccgacgacg 416 |||||||||||||||||||| Sbjct: 765074 ccacgcgctcgccgacgacg 765093
>gb|AC166914.1| Mus musculus chromosome 5, clone wi1-2255B14, complete sequence Length = 38729 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 atttctttctctctgccact 74 |||||||||||||||||||| Sbjct: 37461 atttctttctctctgccact 37442
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggcggtggcggcggaggcgccctccccc 256 ||||| |||||||| ||||||||||||| Sbjct: 16091747 ggcggcggcggcggcggcgccctccccc 16091720
>gb|AC172242.3| Gallus gallus BAC clone CH261-162M6 from chromosome ul, complete sequence Length = 252782 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tcgcagccaatggccgcctc 96 |||||||||||||||||||| Sbjct: 250722 tcgcagccaatggccgcctc 250741
>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017D19, complete sequence Length = 142015 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 ggtggcggcggaggcgccctcccc 255 ||||||||||| |||||||||||| Sbjct: 34466 ggtggcggcggcggcgccctcccc 34489
>gb|AC127333.3| Mus musculus BAC clone RP23-137F10 from 7, complete sequence Length = 185795 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggccgcctcggctatcagaa 107 |||||||||||||||||||| Sbjct: 34039 ggccgcctcggctatcagaa 34020
>gb|AC125213.3| Mus musculus BAC clone RP23-136A14 from 7, complete sequence Length = 194309 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggccgcctcggctatcagaa 107 |||||||||||||||||||| Sbjct: 3922 ggccgcctcggctatcagaa 3941
>gb|AF308285.1| Homo sapiens serologically defined breast cancer antigen NY-BR-16 mRNA, complete cds Length = 3684 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 2 aggcggtggcggcggaggcg 21
>emb|X59069.1|OCPMA1 O.cuniculus PMCA1 gene for plasma membrane Ca2+/Mg2+ ATPase Length = 4479 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gccgccgccgtctccgcgcc 138 |||||||||||||||||||| Sbjct: 67 gccgccgccgtctccgcgcc 48
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 169693 aggcggtggcggcggaggcg 169674
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 tcaaggcggtggcggcggaggcgc 248 |||||||||||||||| ||||||| Sbjct: 216908 tcaaggcggtggcggccgaggcgc 216885
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 tcaaggcggtggcggcggaggcgc 248 |||||||||||||||| ||||||| Sbjct: 222368 tcaaggcggtggcggccgaggcgc 222345
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 tcaaggcggtggcggcggaggcgc 248 |||||||||||||||| ||||||| Sbjct: 308322 tcaaggcggtggcggccgaggcgc 308345
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgcgaggcccgacgcgctcg 320 |||||||||||||||||||| Sbjct: 2548436 cgcgaggcccgacgcgctcg 2548417 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccacgcgctcgccgacgacg 416 |||||||||||||||||||| Sbjct: 2085353 ccacgcgctcgccgacgacg 2085372
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 217840 aggcggtggcggcggaggcg 217821
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgcccccgccctcccgcgcg 154 |||||||||||||||||||| Sbjct: 94503 cgcccccgccctcccgcgcg 94522
>ref|NM_001004767.1| Gallus gallus sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae) (SIRT1), mRNA Length = 2271 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tcgcagccaatggccgcctc 96 |||||||||||||||||||| Sbjct: 413 tcgcagccaatggccgcctc 394
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 52507 aggcggtggcggcggaggcg 52526
>gb|AY094783.1| Drosophila melanogaster LD12750 full insert cDNA Length = 725 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 342 aggcggtggcggcggaggcg 361
>ref|NM_132536.1| Drosophila melanogaster CG1840-RA (CG1840), mRNA Length = 716 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 360 aggcggtggcggcggaggcg 379
>gb|AC053527.8| Homo sapiens BAC clone RP11-692D12 from 4, complete sequence Length = 233250 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 155884 aggcggtggcggcggaggcg 155865
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccacgcgctcgccgacgacg 416 |||||||||||||||||||| Sbjct: 1659742 ccacgcgctcgccgacgacg 1659761 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgcgaggcccgacgcgctcg 320 |||||||||||||||||||| Sbjct: 214539 cgcgaggcccgacgcgctcg 214558
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggcggtggcggcggaggcgccctccccc 256 ||||| |||||||| ||||||||||||| Sbjct: 17837458 ggcggcggcggcggtggcgccctccccc 17837485 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 gtggcggcggaggcgccctccccc 256 |||||||||| ||||||||||||| Sbjct: 4416367 gtggcggcggcggcgccctccccc 4416390
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 ggtggcggcggaggcgccctcccc 255 ||||||||||| |||||||||||| Sbjct: 22603680 ggtggcggcggcggcgccctcccc 22603703
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggcggtggcggcggaggcgccctccccc 256 ||||| |||||||| ||||||||||||| Sbjct: 16086280 ggcggcggcggcggcggcgccctccccc 16086253
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 cagccgccgccgtctccgcgcccccgcc 144 |||||||||||| ||||||| ||||||| Sbjct: 30681434 cagccgccgccgcctccgcgtccccgcc 30681407
>dbj|AB160952.1| Gallus gallus sirt1 mRNA for NAD-dependent deacetylase SIRT1, complete cds Length = 2271 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tcgcagccaatggccgcctc 96 |||||||||||||||||||| Sbjct: 413 tcgcagccaatggccgcctc 394
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcccagccgccgccgtctcc 133 |||||||||||||||||||| Sbjct: 107354 gcccagccgccgccgtctcc 107335
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 4374430 aggcggtggcggcggaggcg 4374449
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 cgccgacgacgaggacttcc 425 |||||||||||||||||||| Sbjct: 60907 cgccgacgacgaggacttcc 60926
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 106641 gacgccgtcgtcccggagaggcgc 106664
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 57841 gacgccgtcgtcccggagaggcgc 57864
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 ccgccgccgtctccgcgcccccgc 143 |||||||||||||||| ||||||| Sbjct: 3040674 ccgccgccgtctccgctcccccgc 3040651
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 cagccgccgccgtctccgcgcccccgcc 144 |||||||||||| ||||||| ||||||| Sbjct: 21581 cagccgccgccgcctccgcgtccccgcc 21554
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cgccttccacgcgctcgccg 410 |||||||||||||||||||| Sbjct: 3887364 cgccttccacgcgctcgccg 3887383
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ccggtcaaggcggtggcggc 240 |||||||||||||||||||| Sbjct: 6200357 ccggtcaaggcggtggcggc 6200376
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 39409 aggcggtggcggcggaggcg 39428
>emb|BX085195.5| Zebrafish DNA sequence from clone DKEY-226A5 in linkage group 3, complete sequence Length = 227111 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tttctttctctctgccactc 75 |||||||||||||||||||| Sbjct: 75224 tttctttctctctgccactc 75205
>dbj|AB125639.1| Brassica oleracea BO-GR mRNA for glutathione reductase, complete cds Length = 1716 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 caaggcggtggcggcggagg 245 |||||||||||||||||||| Sbjct: 80 caaggcggtggcggcggagg 99
>dbj|AK122070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117I22, full insert sequence Length = 2126 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 361 aggcggtggcggcggaggcg 342
>dbj|AK104545.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C02, full insert sequence Length = 1204 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 649 gacgccgtcgtcccggagaggcgc 626
>dbj|AK104652.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C01, full insert sequence Length = 1213 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 650 gacgccgtcgtcccggagaggcgc 627
>dbj|AK104601.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G05, full insert sequence Length = 1205 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 650 gacgccgtcgtcccggagaggcgc 627
>dbj|AK104462.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C01, full insert sequence Length = 1204 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 649 gacgccgtcgtcccggagaggcgc 626
>dbj|AK104432.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-A08, full insert sequence Length = 1204 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 649 gacgccgtcgtcccggagaggcgc 626
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gacgccgtcggcccggagag 188 |||||||||||||||||||| Sbjct: 2412936 gacgccgtcggcccggagag 2412917
>dbj|AK064807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D18, full insert sequence Length = 1896 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 214 aggcggtggcggcggaggcg 195
>dbj|AK060927.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-A03, full insert sequence Length = 1212 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gacgccgtcggcccggagaggcgc 192 |||||||||| ||||||||||||| Sbjct: 649 gacgccgtcgtcccggagaggcgc 626
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggcggtggcggcggaggcg 247 |||||||||||||||||||| Sbjct: 179948 aggcggtggcggcggaggcg 179967
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 ggtggcggcggaggcgccctcccc 255 ||||||||||| |||||||||||| Sbjct: 22913591 ggtggcggcggcggcgccctcccc 22913614
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggcggtggcggcggaggcgccctccccc 256 ||||| |||||||| ||||||||||||| Sbjct: 17763777 ggcggcggcggcggtggcgccctccccc 17763804 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 gtggcggcggaggcgccctccccc 256 |||||||||| ||||||||||||| Sbjct: 4416348 gtggcggcggcggcgccctccccc 4416371
>emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168699 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 gtggcggcggaggcgccctccccc 256 |||||||||| ||||||||||||| Sbjct: 88129 gtggcggcggcggcgccctccccc 88106
>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178147 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 gtggcggcggaggcgccctccccc 256 |||||||||| ||||||||||||| Sbjct: 35350 gtggcggcggcggcgccctccccc 35327
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142246 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggcggtggcggcggaggcgccctccccc 256 ||||| |||||||| ||||||||||||| Sbjct: 56656 ggcggcggcggcggtggcgccctccccc 56683 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,502,748 Number of Sequences: 3902068 Number of extensions: 3502748 Number of successful extensions: 120676 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 117210 Number of HSP's gapped (non-prelim): 3483 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
