ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet47a08 |
|---|---|
| Clone Library Name | barley_pub |
>Y944_HELPY (O25598) Hypothetical UPF0076 protein HP0944| Length = 125 Score = 56.2 bits (134), Expect = 2e-08 Identities = 27/56 (48%), Positives = 35/56 (62%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 KE + + AP A+GPYSQAI N+LVFVSG LG++ TG+F Q M+N Sbjct: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMEN 57
>Y944_HELPJ (Q9ZKQ6) Hypothetical UPF0076 protein jhp_0879| Length = 125 Score = 56.2 bits (134), Expect = 2e-08 Identities = 27/56 (48%), Positives = 35/56 (62%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 KE + + AP A+GPYSQAI N+LVFVSG LG++ TG+F Q M+N Sbjct: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMEN 57
>Y4SK_RHISN (P55654) Hypothetical UPF0076 protein y4sK| Length = 126 Score = 55.8 bits (133), Expect = 2e-08 Identities = 26/55 (47%), Positives = 34/55 (61%) Frame = +2 Query: 236 EAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 E + T AP A+GPYSQAIK +L+FVSG L ++P TG+F Q +KN Sbjct: 3 EPISTNDAPGAVGPYSQAIKVGDLLFVSGQLPIDPATGEFNSANAVEQAEQCLKN 57
>Y1251_PYRAB (Q9UZA3) Hypothetical UPF0076 protein PYRAB12510| Length = 127 Score = 55.8 bits (133), Expect = 2e-08 Identities = 25/56 (44%), Positives = 36/56 (64%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 KE + TEKAP +GPYSQAIK N +FV+G + ++PETG+ +V++N Sbjct: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIEN 58
>Y854_PYRHO (O58584) Hypothetical UPF0076 protein PH0854| Length = 126 Score = 54.7 bits (130), Expect = 5e-08 Identities = 24/56 (42%), Positives = 36/56 (64%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 KE + TE AP +GPYSQAIKA N +F++G + ++P+TG+ QV++N Sbjct: 2 KEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLEN 57
>Y142_LEUMC (P97117) Hypothetical UPF0076 protein| Length = 130 Score = 54.3 bits (129), Expect = 7e-08 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = +2 Query: 227 VQKEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 + K+ V T AP ALGPYSQAI +N +++SG +G++PET +F Q+ N Sbjct: 1 MSKKVVSTTTAPKALGPYSQAILNDNTLYISGQIGIDPETDEFAGATTAEQAHQIFDN 58
>Y364_AQUAE (O66689) Hypothetical UPF0076 protein aq_364| Length = 125 Score = 54.3 bits (129), Expect = 7e-08 Identities = 21/37 (56%), Positives = 30/37 (81%) Frame = +2 Query: 242 VQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 ++T KAP +GPYSQA++ N +F+SG +G+NPETGK Sbjct: 4 IKTPKAPVPVGPYSQAVEVNGFLFISGQIGINPETGK 40
>UK14_MOUSE (P52760) Ribonuclease UK114 (EC 3.1.-.-) (Heat-responsive protein| 12) Length = 134 Score = 53.5 bits (127), Expect = 1e-07 Identities = 21/60 (35%), Positives = 39/60 (65%) Frame = +2 Query: 221 ATVQKEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 +++ ++ + T KAPAA+GPYSQA++ + +++SG +GL+P +G+ Q +KN Sbjct: 1 SSIIRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKN 60
>YSD2_CAEEL (Q10121) Hypothetical UPF0076 protein C23G10.2 in chromosome III| Length = 171 Score = 51.6 bits (122), Expect = 4e-07 Identities = 20/41 (48%), Positives = 32/41 (78%) Frame = +2 Query: 227 VQKEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETG 349 V ++ + + AP A+GPYSQA++A N +++SG LGL+P+TG Sbjct: 39 VTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTG 79
>UK14_HUMAN (P52758) Ribonuclease UK114 (EC 3.1.-.-) (14.5 kDa translational| inhibitor protein) (p14.5) (UK114 antigen homolog) Length = 137 Score = 50.4 bits (119), Expect = 1e-06 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 + + T KAP A+GPYSQA+ + +++SG +G++P +G+ Q +KN Sbjct: 6 RRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKN 61
>UK14_RAT (P52759) Ribonuclease UK114 (EC 3.1.-.-) (14.5 kDa translational| inhibitor protein) (Perchloric acid soluble protein) Length = 136 Score = 50.1 bits (118), Expect = 1e-06 Identities = 20/60 (33%), Positives = 37/60 (61%) Frame = +2 Query: 221 ATVQKEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 +++ ++ + T KAPAA+G YSQA+ + ++VSG +G++P +G+ Q +KN Sbjct: 1 SSIIRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKN 60
>Y811_SULTO (Q973T6) Hypothetical UPF0076 protein ST0811| Length = 125 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/55 (43%), Positives = 32/55 (58%) Frame = +2 Query: 236 EAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 E V TEKAP +GPYSQAIK N ++VSG + ++P T + QV+ N Sbjct: 2 ETVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDN 56
>Y719_HAEIN (P44839) UPF0076 protein HI0719| Length = 130 Score = 48.9 bits (115), Expect = 3e-06 Identities = 21/39 (53%), Positives = 28/39 (71%) Frame = +2 Query: 236 EAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 + + TEKAPAA+GPY QA+ NLV SG + +NP TG+ Sbjct: 4 QIIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPATGE 42
>UK14_CAPHI (P80601) Ribonuclease UK114 (EC 3.1.-.-) (14.5 kDa translational| inhibitor protein) (UK114 antigen) (14.3 kDa perchloric acid soluble protein) Length = 136 Score = 48.9 bits (115), Expect = 3e-06 Identities = 20/60 (33%), Positives = 36/60 (60%) Frame = +2 Query: 221 ATVQKEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 +++ + + T KAPAA+GPYSQA+ + +++SG LG++P +G+ Q + N Sbjct: 1 SSLVRRIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTN 60
>Y3206_SULSO (Q97U19) Hypothetical UPF0076 protein SSO3206| Length = 126 Score = 47.0 bits (110), Expect = 1e-05 Identities = 20/56 (35%), Positives = 35/56 (62%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 KE + TEKAP +GPYSQ +K ++++VSG + ++P+T + +V++N Sbjct: 2 KEIIFTEKAPKPIGPYSQGVKVGDILYVSGQIPVDPKTNEVVGKNIEEQTIRVIEN 57
>YVN1_AZOVI (P40431) Hypothetical UPF0076 protein in vnfA 5'region (ORF1)| Length = 127 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/58 (37%), Positives = 35/58 (60%) Frame = +2 Query: 227 VQKEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 + K + T+KAPAA+G YSQAI+A + V++SG + L+P T + +V +N Sbjct: 1 MSKSVINTDKAPAAIGTYSQAIRAGDTVYLSGQIPLDPGTMELVEGDFEAQTVRVFEN 58
>Y1466_PASMU (Q9L6B5) Hypothetical UPF0076 protein PM1466| Length = 129 Score = 44.7 bits (104), Expect = 5e-05 Identities = 17/39 (43%), Positives = 28/39 (71%) Frame = +2 Query: 236 EAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 + + T+ APAA+GPY QA+ N++ SG + +NP+TG+ Sbjct: 3 KVIHTDNAPAAIGPYVQAVDLGNMLLTSGQIPVNPKTGE 41
>Y709_SYNY3 (P52761) Hypothetical UPF0076 protein slr0709| Length = 130 Score = 44.7 bits (104), Expect = 5e-05 Identities = 18/35 (51%), Positives = 27/35 (77%) Frame = +2 Query: 242 VQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPET 346 +QT +APA +GPY+QAI AN +F +G + L+P+T Sbjct: 6 IQTAQAPAPVGPYNQAIAANGFLFTAGQIALDPQT 40
>YJGF_SHIFL (P0AF95) UPF0076 protein yjgF| Length = 127 Score = 44.7 bits (104), Expect = 5e-05 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = +2 Query: 236 EAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 + + TE APAA+GPY Q + N++ SG + +NP+TG+ Sbjct: 2 KTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGE 40
>YJGF_ECOLI (P0AF93) UPF0076 protein yjgF| Length = 127 Score = 44.7 bits (104), Expect = 5e-05 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = +2 Query: 236 EAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 + + TE APAA+GPY Q + N++ SG + +NP+TG+ Sbjct: 2 KTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGE 40
>YJGF_ECOL6 (P0AF94) UPF0076 protein yjgF| Length = 127 Score = 44.7 bits (104), Expect = 5e-05 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = +2 Query: 236 EAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 + + TE APAA+GPY Q + N++ SG + +NP+TG+ Sbjct: 2 KTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGE 40
>ALDR_LACLA (O34133) Putative regulator aldR| Length = 126 Score = 43.9 bits (102), Expect = 9e-05 Identities = 22/53 (41%), Positives = 28/53 (52%) Frame = +2 Query: 242 VQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 + T APAA+GPY Q N L++ SG + LNP G+ QVMKN Sbjct: 4 IATLDAPAAIGPYVQGKIVNGLLYASGQIPLNPLNGEIVGDSIETQTEQVMKN 56
>TDCF_SHIFL (P0AGL4) Protein tdcF| Length = 129 Score = 43.1 bits (100), Expect = 2e-04 Identities = 16/40 (40%), Positives = 29/40 (72%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 K+ ++T++AP A+GPY Q + ++VF SG + + P+TG+ Sbjct: 2 KKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGE 41
>TDCF_ECOLI (P0AGL2) Protein tdcF| Length = 129 Score = 43.1 bits (100), Expect = 2e-04 Identities = 16/40 (40%), Positives = 29/40 (72%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 K+ ++T++AP A+GPY Q + ++VF SG + + P+TG+ Sbjct: 2 KKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGE 41
>TDCF_ECOL6 (P0AGL3) Protein tdcF| Length = 129 Score = 43.1 bits (100), Expect = 2e-04 Identities = 16/40 (40%), Positives = 29/40 (72%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 K+ ++T++AP A+GPY Q + ++VF SG + + P+TG+ Sbjct: 2 KKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGE 41
>YABJ_BACSU (P37552) UPF0076 protein yabJ| Length = 124 Score = 43.1 bits (100), Expect = 2e-04 Identities = 23/55 (41%), Positives = 31/55 (56%) Frame = +2 Query: 236 EAVQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 +AV T+ APAA+GPYSQ I NN+ + SG + L P +G+ QV N Sbjct: 2 KAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTP-SGEMVNGDIKEQTHQVFSN 55
>DFRA_MYXXA (O52178) Protein dfrA| Length = 131 Score = 42.4 bits (98), Expect = 3e-04 Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIK--ANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 ++A+ +++AP A+GPYSQA++ A + F+SG + L+P T + +VM+N Sbjct: 6 RKAIHSDQAPKAIGPYSQAVQVDAGKMTFLSGQIPLDPATMEMVQGDVVAQAERVMEN 63
>Y359_BUCAP (Q8K9H7) Hypothetical UPF0076 protein BUsg359| Length = 128 Score = 42.0 bits (97), Expect = 4e-04 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +2 Query: 242 VQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPETGK 352 V TE AP +GPYSQAIK N + +SG + ++ ++GK Sbjct: 5 VNTENAPKPIGPYSQAIKNENFLIISGQIPIDVKSGK 41
>HMF1_YEAST (P40037) Protein HMF1 (High dosage growth inhibitor)| Length = 129 Score = 39.3 bits (90), Expect = 0.002 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = +2 Query: 251 EKAPAALGPYSQAIKANNLVFVSGVLGLNPETGKFXXXXXXXXXXQVMKN 400 E APAA YS A+K NNL+F+SG + + P+ K QV++N Sbjct: 11 ESAPAAAASYSHAMKVNNLIFLSGQIPVTPD-NKLVEGSIADKAEQVIQN 59
>MMF1_YEAST (P40185) Protein MMF1, mitochondrial precursor (Maintenance of| mitochondrial function 1) (Isoleucine biosynthesis and maintenance of intact mitochondria 1) Length = 145 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/34 (52%), Positives = 23/34 (67%) Frame = +2 Query: 242 VQTEKAPAALGPYSQAIKANNLVFVSGVLGLNPE 343 V T+ AP A YSQA+KANN V+VSG + P+ Sbjct: 24 VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPD 57
>Y371_BUCAI (P57452) Hypothetical UPF0076 protein BU371| Length = 128 Score = 36.2 bits (82), Expect = 0.019 Identities = 13/32 (40%), Positives = 24/32 (75%) Frame = +2 Query: 242 VQTEKAPAALGPYSQAIKANNLVFVSGVLGLN 337 ++T+ AP +GPYSQA+K +N + +SG + ++ Sbjct: 5 IETKDAPKPIGPYSQALKIDNFIILSGQIPID 36
>Y334_BUCBP (Q89AG0) Hypothetical UPF0076 protein bbp_334| Length = 126 Score = 35.8 bits (81), Expect = 0.025 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +2 Query: 242 VQTEKAPAALGPYSQAIKANNLVFVSG 322 + T K+P +GPYSQAI+ N F+SG Sbjct: 5 IHTHKSPKPIGPYSQAIQIKNFTFLSG 31
>MMF1_SCHPO (O43003) Protein mmf1, mitochondrial precursor (Maintenance of| mitochondrial function 1) (Isoleucine biosynthesis and maintenance of intact mitochondria 1) Length = 162 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +2 Query: 233 KEAVQTEKAPAALGPYSQAIKANNLVFVSG 322 K + + K +A GPY+QAIKAN +++ SG Sbjct: 39 KTPINSPKLSSA-GPYNQAIKANGVIYCSG 67
>MMF2_SCHPO (Q9UR06) Protein mmf2, mitochondrial precursor (Maintenance of| mitochondrial function 2) Length = 126 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +2 Query: 272 GPYSQAIKANNLVFVSG 322 GPY+QA+K+ L+F SG Sbjct: 15 GPYNQAVKSGGLIFCSG 31
>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)| (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin) Length = 8797 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = -2 Query: 362 QRQTSLSQDLGLERQRQTQDCLLLSPESRGLVLL 261 QRQ+SL Q LE++ Q LL S SRG +L Sbjct: 6226 QRQSSLQQQKELEQELAEQKSLLRSVASRGEEIL 6259 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,526,211 Number of Sequences: 219361 Number of extensions: 405411 Number of successful extensions: 1273 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1251 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1272 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
