ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet46h11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482546.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1146 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 283 ggcctcctcctccgcggcgccggctcccccgtcgtcaagcgc 324 ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 130 ggcctcctcctccgcggcgccgggtcccccgtggtgaagcgc 171
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 283 ggcctcctcctccgcggcgccggctcccccgtcgtcaagcgc 324 ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 21007346 ggcctcctcctccgcggcgccgggtcccccgtggtgaagcgc 21007387 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggcc 258 |||||||||||||||||||||| Sbjct: 25893252 ggccccggccccggcccaggcc 25893273 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 acggagggagtatttcattt 45 |||||||||||||||||||| Sbjct: 3387687 acggagggagtatttcattt 3387668
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 283 ggcctcctcctccgcggcgccggctcccccgtcgtcaagcgc 324 ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 73521 ggcctcctcctccgcggcgccgggtcccccgtggtgaagcgc 73562
>gb|AC137745.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0041J18, complete sequence Length = 129523 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 cgcctcccgcggcctcctcctccgcggcg 301 |||| |||||||||||||||||||||||| Sbjct: 1799 cgccgcccgcggcctcctcctccgcggcg 1827
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 cgcctcccgcggcctcctcctccgcggcg 301 |||| |||||||||||||||||||||||| Sbjct: 114629 cgccgcccgcggcctcctcctccgcggcg 114657
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 cgcctcccgcggcctcctcctccgcggcg 301 |||| |||||||||||||||||||||||| Sbjct: 16474030 cgccgcccgcggcctcctcctccgcggcg 16474058 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 accaccagcccgccgcctcc 279 |||||||||||||||||||| Sbjct: 23055903 accaccagcccgccgcctcc 23055922
>dbj|AK071592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104G24, full insert sequence Length = 1890 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 cgcctcccgcggcctcctcctccgcggcg 301 |||| |||||||||||||||||||||||| Sbjct: 91 cgccgcccgcggcctcctcctccgcggcg 119
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 cgcctcccgcggcctcctcctccgcggcg 301 |||| |||||||||||||||||||||||| Sbjct: 16565034 cgccgcccgcggcctcctcctccgcggcg 16565062 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 accaccagcccgccgcctcc 279 |||||||||||||||||||| Sbjct: 23365813 accaccagcccgccgcctcc 23365832
>ref|XM_848806.1| PREDICTED: Canis familiaris similar to nucleoredoxin (LOC611162), mRNA Length = 2042 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 ggccccggccccggcccaggccc 259 ||||||||||||||||||||||| Sbjct: 221 ggccccggccccggcccaggccc 199 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 227 ggccccggccccggccccggccca 204
>emb|AL359878.13| Human DNA sequence from clone RP11-363N22 on chromosome 10 Contains the 5' end of gene KIAA0217, a novel gene, the 5' end of the gene for G protein-binding protein CRFG (NGB FLJ10686 FLJ10690 FLJ39774) and four CpG islands, complete sequence Length = 184289 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccc 259 ||||||||||||||||||||||| Sbjct: 112359 ggccccggccccggcccaggccc 112381
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 ctgccaggccccggccccggccc 253 ||||||||||||||||||||||| Sbjct: 29550 ctgccaggccccggccccggccc 29528
>ref|NM_193977.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4446 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 285 cctcctcctccgcggcgccggctcccccgt 314 ||||||| || ||||||||||||||||||| Sbjct: 14 cctcctcgtcggcggcgccggctcccccgt 43
>ref|XM_844688.1| PREDICTED: Canis familiaris similar to osterix (LOC607857), mRNA Length = 1425 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 ggcctcctcctccgcggcgccg 304 |||||||||||||||||||||| Sbjct: 1335 ggcctcctcctccgcggcgccg 1314
>gb|AC087728.3| Papio anubis clone RP41-340H23, complete sequence Length = 198888 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccag 255 |||||||||||||||||||||| Sbjct: 142245 ccaggccccggccccggcccag 142224
>emb|AL592148.7| Human DNA sequence from clone RP11-378J18 on chromosome 1 Contains the gene for a novel protein (FLJ13840), the TAF1A gene for TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa, two novel genes, the gene for C219-reactive peptide (FLJ39207), the 3' of the gene for a novel protein (FLJ12806) and a CpG island, complete sequence Length = 194034 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 282 cggcctcctcctccgcggcgccggctcccc 311 ||||||||||||||||| | |||||||||| Sbjct: 122418 cggcctcctcctccgcgtcaccggctcccc 122447
>gb|AC139100.3| Homo sapiens chromosome 18, clone, complete sequence Length = 276546 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 ccaggccccggccccggcccaggccc 259 |||||||||||||||||||| ||||| Sbjct: 265691 ccaggccccggccccggccccggccc 265716
>gb|BC060797.1| Homo sapiens par-6 partitioning defective 6 homolog gamma (C. elegans), mRNA (cDNA clone MGC:71606 IMAGE:30348280), complete cds Length = 3141 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccaggccc 259 |||||||||||||||||||| ||||| Sbjct: 91 ccaggccccggccccggccccggccc 66
>gb|AC127503.3| Homo sapiens chromosome 18, clone RP11-245M2, complete sequence Length = 145418 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccaggccc 259 |||||||||||||||||||| ||||| Sbjct: 7795 ccaggccccggccccggccccggccc 7770
>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence Length = 217337 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccaggccc 259 |||||||||||||||||||| ||||| Sbjct: 51820 ccaggccccggccccggccccggccc 51795
>gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold Length = 359132 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 233 gccaggccccggccccggcccaggcc 258 ||||||||| |||||||||||||||| Sbjct: 56990 gccaggcccaggccccggcccaggcc 57015
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 ccaggccccggccccggcccaggccc 259 |||||||||||||||||||| ||||| Sbjct: 67991 ccaggccccggccccggccccggccc 68016
>ref|NM_032510.2| Homo sapiens par-6 partitioning defective 6 homolog gamma (C. elegans) (PARD6G), mRNA Length = 3141 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccaggccc 259 |||||||||||||||||||| ||||| Sbjct: 91 ccaggccccggccccggccccggccc 66
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 cctcccgcggcctcctcctccg 296 |||||||||||||||||||||| Sbjct: 4726123 cctcccgcggcctcctcctccg 4726102
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 285 cctcctcctccgcggcgccggctcccccgt 314 ||||||| || ||||||||||||||||||| Sbjct: 14340110 cctcctcgtcggcggcgccggctcccccgt 14340081
>gb|AY217094.1| Pseudorabies virus glycoprotein D (gD) gene, complete cds Length = 1306 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 ccaggccccggccccggcccaggccc 259 |||||||||||||||||||| ||||| Sbjct: 858 ccaggccccggccccggccccggccc 883
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcattt 45 |||||||||||||||||||||| Sbjct: 39693 ggacggagggagtatttcattt 39714
>dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1157F09 Length = 148802 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 285 cctcctcctccgcggcgccggctcccccgt 314 ||||||| || ||||||||||||||||||| Sbjct: 91387 cctcctcgtcggcggcgccggctcccccgt 91358
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 285 cctcctcctccgcggcgccggctcccccgt 314 ||||||| || ||||||||||||||||||| Sbjct: 1507 cctcctcgtcggcggcgccggctcccccgt 1478
>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1097H10 Length = 159732 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 cctcccgcggcctcctcctccg 296 |||||||||||||||||||||| Sbjct: 43727 cctcccgcggcctcctcctccg 43706
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggcc 258 |||||||||||||||||||||| Sbjct: 79039 ggccccggccccggcccaggcc 79060
>dbj|AB093426.1| Oryza sativa (japonica cultivar-group) gene for isoamylase, complete cds Length = 10209 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 ggccccggccccggcccaggcc 258 |||||||||||||||||||||| Sbjct: 3371 ggccccggccccggcccaggcc 3350
>emb|AJ535074.1|OSA535074 Oryza sativa (japonica cultivar-group) mrp8 gene for MRP-like ABC transporter, exons 1-11 Length = 16621 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 285 cctcctcctccgcggcgccggctcccccgt 314 ||||||| || ||||||||||||||||||| Sbjct: 14 cctcctcgtcggcggcgccggctcccccgt 43
>emb|AL591542.20| Mouse DNA sequence from clone RP23-321M14 on chromosome 2, complete sequence Length = 197190 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 tgccaggccccggccccggccc 253 |||||||||||||||||||||| Sbjct: 151124 tgccaggccccggccccggccc 151145
>ref|XM_523049.1| PREDICTED: Pan troglodytes LOC467655 (LOC467655), mRNA Length = 1035 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 cccgccgcctcccgcggcctc 288 ||||||||||||||||||||| Sbjct: 524 cccgccgcctcccgcggcctc 544
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 cggacggagggagtatttcat 43 ||||||||||||||||||||| Sbjct: 9632 cggacggagggagtatttcat 9652
>gb|AC111129.12| Mus musculus chromosome 5, clone RP23-339H11, complete sequence Length = 196458 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccaggcccacc 262 |||||||| ||||| |||||||||||||| Sbjct: 28095 ccaggcccaggcccaggcccaggcccacc 28067 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 28108 gccaggcccaggcccaggcccaggccca 28081
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 ccgcggcctcctcctccgcggcgcc 303 |||||||||| |||||||||||||| Sbjct: 89152 ccgcggcctcatcctccgcggcgcc 89176
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 cggacggagggagtatttcat 43 ||||||||||||||||||||| Sbjct: 116404 cggacggagggagtatttcat 116424
>ref|XM_601469.2| PREDICTED: Bos taurus similar to HMT1 hnRNP methyltransferase-like 3 (LOC523174), mRNA Length = 1689 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 cctcctcctccgcggcgccgg 305 ||||||||||||||||||||| Sbjct: 151 cctcctcctccgcggcgccgg 131
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 ccgcggcctcctcctccgcggcgcc 303 |||||||||| |||||||||||||| Sbjct: 24853917 ccgcggcctcatcctccgcggcgcc 24853941 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 gacggagggagtatttcatttcgt 48 |||||||||||||| ||||||||| Sbjct: 32729792 gacggagggagtatatcatttcgt 32729769 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 cagcccgccgcctcccgcggcctc 288 ||||||||||||||||||| |||| Sbjct: 20128109 cagcccgccgcctcccgcgccctc 20128132
>ref|XM_846025.1| PREDICTED: Canis familiaris similar to ADAMTS-5 precursor (A disintegrin and metalloproteinase with thrombospondin motifs 5) (ADAM-TS 5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (ADAM-TS 11) (LOC487713), mRNA Length = 2403 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 ggccccggccccggcccaggcccac 261 ||||||||||||||||| ||||||| Sbjct: 228 ggccccggccccggccccggcccac 204
>ref|XM_973087.1| PREDICTED: Mus musculus hypothetical protein LOC669108 (LOC669108), mRNA Length = 3195 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccaggcccacc 262 |||||||| ||||| |||||||||||||| Sbjct: 2303 ccaggcccaggcccaggcccaggcccacc 2275 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 2316 gccaggcccaggcccaggcccaggccca 2289
>ref|XM_355598.4| PREDICTED: Mus musculus gene model 1043, (NCBI) (Gm1043), mRNA Length = 3033 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccaggcccacc 262 |||||||| ||||| |||||||||||||| Sbjct: 2303 ccaggcccaggcccaggcccaggcccacc 2275 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 2316 gccaggcccaggcccaggcccaggccca 2289
>ref|XM_989078.1| PREDICTED: Mus musculus hypothetical protein LOC676322 (LOC676322), mRNA Length = 3405 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccaggcccacc 262 |||||||| ||||| |||||||||||||| Sbjct: 2675 ccaggcccaggcccaggcccaggcccacc 2647 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 2688 gccaggcccaggcccaggcccaggccca 2661
>ref|XM_850252.1| PREDICTED: Canis familiaris similar to CREBBP/EP300 inhibitor 2 (LOC612523), mRNA Length = 1561 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 gccaggccccggccccggccc 253 ||||||||||||||||||||| Sbjct: 349 gccaggccccggccccggccc 369
>ref|XM_541045.2| PREDICTED: Canis familiaris similar to nuclear factor of activated T-cells, cytosolic component 1 isoform C (LOC483925), mRNA Length = 3043 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 gccaggccccggccccggccc 253 ||||||||||||||||||||| Sbjct: 75 gccaggccccggccccggccc 95
>gb|AC110238.10| Mus musculus chromosome 5, clone RP23-106D12, complete sequence Length = 197964 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 ccaggccccggccccggcccaggcccacc 262 |||||||| ||||| |||||||||||||| Sbjct: 155066 ccaggcccaggcccaggcccaggcccacc 155038 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 155079 gccaggcccaggcccaggcccaggccca 155052
>gb|BC064427.1| Homo sapiens cDNA clone IMAGE:5762468, **** WARNING: chimeric clone **** Length = 2860 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggc 257 ||||||||||||||||||||| Sbjct: 199 ggccccggccccggcccaggc 219
>gb|AF024589.1| X Tritordeum sp. glycine decarboxylase P subunit mRNA, complete cds Length = 3487 Score = 42.1 bits (21), Expect = 1.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 270 cgccgcctcc-cgcggcctcctcctccgc 297 |||||||||| |||||||||||||||||| Sbjct: 119 cgccgcctcctcgcggcctcctcctccgc 147
>gb|BC098404.1| Homo sapiens suppressor of defective silencing 3 homolog (S. cerevisiae), mRNA (cDNA clone MGC:104711 IMAGE:30332266), complete cds Length = 4464 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggc 257 ||||||||||||||||||||| Sbjct: 183 ggccccggccccggcccaggc 203
>emb|Z97652.9|HS395F10 Human DNA sequence from clone LA16c-395F10 on chromosome 16, complete sequence Length = 28320 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 231 ctgccaggccccggccccggcccaggccc 259 ||||| ||||||||||||||||| ||||| Sbjct: 8702 ctgcccggccccggccccggccccggccc 8674
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 194 tcccgccgccgcgctgcctgccggc 218 |||||||||||||| |||||||||| Sbjct: 1894280 tcccgccgccgcgcagcctgccggc 1894304
>emb|AL356356.17| Human DNA sequence from clone RP11-54A4 on chromosome 1 Contains the 3' end of the gene for a novel protein (KIAA0460), the gene for threonyl-tRNA synthetase (FLJ12528), the ECM1 gene for extracellular matrix protein 1, the TSRC1 gene for thrombospondin repeat containing 1, two novel genes, the MCL1 gene for myeloid cell leukemia sequence 1 (BCL2-related), the ENSA gene for endosulfine alpha, the 3' end of the gene for GPP34-related protein (GPP34R) and two CpG islands, complete sequence Length = 176550 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 caggccccggccccggcccaggccc 259 ||||||||||||||||||| ||||| Sbjct: 107066 caggccccggccccggccccggccc 107042
>gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, complete sequence Length = 195494 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 237 ggccccggccccggcccaggcccaccacc 265 |||||| |||||||||| ||||||||||| Sbjct: 183098 ggccccagccccggccctggcccaccacc 183070
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcatt 44 ||||||||||||||||||||| Sbjct: 1480053 ggacggagggagtatttcatt 1480033
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcatt 44 ||||||||||||||||||||| Sbjct: 92807 ggacggagggagtatttcatt 92787
>gb|AC026367.14| Homo sapiens 12 BAC RP11-131L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181445 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggc 257 ||||||||||||||||||||| Sbjct: 110996 ggccccggccccggcccaggc 111016
>emb|CR858733.1| Pongo pygmaeus mRNA; cDNA DKFZp459F177 (from clone DKFZp459F177) Length = 4424 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggc 257 ||||||||||||||||||||| Sbjct: 156 ggccccggccccggcccaggc 176
>gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, complete sequence Length = 177251 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ccccggccccggcccaggccc 259 ||||||||||||||||||||| Sbjct: 92319 ccccggccccggcccaggccc 92339
>gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8 Length = 270150 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 231 ctgccaggccccggccccggcccaggccc 259 ||||| ||||||||||||||||| ||||| Sbjct: 5659 ctgcccggccccggccccggccccggccc 5631
>gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence Length = 185378 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 237 ggccccggccccggcccaggcccaccacc 265 |||||| |||||||||| ||||||||||| Sbjct: 62204 ggccccagccccggccctggcccaccacc 62176
>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence Length = 194729 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ccccggccccggcccaggccc 259 ||||||||||||||||||||| Sbjct: 4688 ccccggccccggcccaggccc 4708
>gb|AC182398.3| Pan troglodytes BAC clone CH251-119B5 from chromosome 15, complete sequence Length = 150565 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 ttgggagccgtttttctctgt 94 ||||||||||||||||||||| Sbjct: 84048 ttgggagccgtttttctctgt 84028
>ref|NM_022491.2| Homo sapiens suppressor of defective silencing 3 homolog (S. cerevisiae) (SUDS3), mRNA Length = 4728 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggc 257 ||||||||||||||||||||| Sbjct: 160 ggccccggccccggcccaggc 180
>emb|AJ271967.1|PVI271967 Suid herpesvirus 1 strain Kaplan mutant gDiE gene for hybrid protein gDiE Length = 1827 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 ccaggccccggccccggcccaggcc 258 |||||||||||||||||||| |||| Sbjct: 848 ccaggccccggccccggccccggcc 872
>gb|DQ088966.1| Homo sapiens myeloid cell leukemia sequence 1 (BCL2-related) (MCL1) gene, complete cds Length = 8834 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 caggccccggccccggcccaggccc 259 ||||||||||||||||||| ||||| Sbjct: 1626 caggccccggccccggccccggccc 1650
>gb|DQ367438.1| Suid herpesvirus 1 strain SA215 glycoprotein D (gD) gene, complete cds Length = 1234 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 ccaggccccggccccggcccaggcc 258 |||||||||||||||||||| |||| Sbjct: 837 ccaggccccggccccggccccggcc 861
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 ccaggccccggccccggcccaggcc 258 |||||||||||||||||||| |||| Sbjct: 121880 ccaggccccggccccggccccggcc 121904
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcatt 44 ||||||||||||||||||||| Sbjct: 1480053 ggacggagggagtatttcatt 1480033
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 gcccaccaccagcccgccgcctccc 280 |||||||||||| |||||||||||| Sbjct: 7341462 gcccaccaccaggccgccgcctccc 7341438 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcatttcg 47 |||||||| ||||||||||||||| Sbjct: 21385819 ggacggagagagtatttcatttcg 21385842
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 cggacggagggagtatttcat 43 ||||||||||||||||||||| Sbjct: 3022388 cggacggagggagtatttcat 3022408 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 23088711 ggacggagggagtatttcat 23088692 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 16155937 ggacggagggagtatttcat 16155956 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 4767219 ggacggagggagtatttcat 4767238
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 ccgcggcctcctcctccgcggcgcc 303 |||||||||| |||||||||||||| Sbjct: 24945240 ccgcggcctcatcctccgcggcgcc 24945264 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 gacggagggagtatttcatttcgt 48 |||||||||||||| ||||||||| Sbjct: 32820302 gacggagggagtatatcatttcgt 32820279 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 cagcccgccgcctcccgcggcctc 288 ||||||||||||||||||| |||| Sbjct: 20121137 cagcccgccgcctcccgcgccctc 20121160
>gb|AC020658.6|AC020658 Homo sapiens chromosome 15 clone RP11-133K1 map 15q14, complete sequence Length = 159007 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 cccgccgcctcccgcggcctc 288 ||||||||||||||||||||| Sbjct: 120330 cccgccgcctcccgcggcctc 120310
>gb|AY196984.1| Pseudorabies virus strain Fa glycoprotein D gene, complete cds Length = 1258 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 ccaggccccggccccggcccaggcc 258 |||||||||||||||||||| |||| Sbjct: 843 ccaggccccggccccggccccggcc 867
>gb|AF147742.1| Homo sapiens myeloid cell differentiation protein (MCL1) gene, promoter and complete cds Length = 6502 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 caggccccggccccggcccaggccc 259 ||||||||||||||||||| ||||| Sbjct: 3700 caggccccggccccggccccggccc 3724
>gb|AF162676.1|AF162676S1 Homo sapiens myeloid cell leukemia protein 1 (MCL1) gene, exons 1 and 2 Length = 2333 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 caggccccggccccggcccaggccc 259 ||||||||||||||||||| ||||| Sbjct: 396 caggccccggccccggccccggccc 420
>gb|AF198614.1|AF198614 Homo sapiens Mcl-1 (MCL-1) and Mcl-1 delta S/TM (MCL-1) genes, alternative spliced forms, complete cds Length = 8253 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 caggccccggccccggcccaggccc 259 ||||||||||||||||||| ||||| Sbjct: 1459 caggccccggccccggccccggccc 1483
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 gcccaccaccagcccgccgcctccc 280 |||||||||||| |||||||||||| Sbjct: 68143 gcccaccaccaggccgccgcctccc 68119
>dbj|AK024460.1| Homo sapiens mRNA for FLJ00052 protein, partial cds Length = 4394 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggc 257 ||||||||||||||||||||| Sbjct: 143 ggccccggccccggcccaggc 163
>gb|AF111170.3|AF111170 Homo sapiens 14q32 Jagged2 gene, complete cds; and unknown gene Length = 148083 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 250 gcccaggcccaccaccagcccgccg 274 |||||| |||||||||||||||||| Sbjct: 124515 gcccagccccaccaccagcccgccg 124491
>emb|AL512355.6|CNS07EF4 Human chromosome 14 DNA sequence BAC R-1087P8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 198273 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 gcccaggcccaccaccagcccgccg 274 |||||| |||||||||||||||||| Sbjct: 8547 gcccagccccaccaccagcccgccg 8571
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 gccgccgcgctgcctgccggcctcc 222 |||||||||||||| |||||||||| Sbjct: 1578339 gccgccgcgctgccagccggcctcc 1578315
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcatt 44 ||||||||||||||||||||| Sbjct: 1480050 ggacggagggagtatttcatt 1480030
>emb|AJ271966.1|PVI271966 Suid herpesvirus 1 strain Kaplan gD gene for glycoprotein D and partial gI gene for glycoprotein I Length = 1590 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 ccaggccccggccccggcccaggcc 258 |||||||||||||||||||| |||| Sbjct: 848 ccaggccccggccccggccccggcc 872
>emb|X87545.1|HSNLM67R H.sapiens genomic DNA (chromosome 3; clone NLM67R) Length = 452 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 ccccggccccggcccaggccc 259 ||||||||||||||||||||| Sbjct: 217 ccccggccccggcccaggccc 197
>emb|AL512356.6|CNS07EF5 Human chromosome 14 DNA sequence BAC R-44N21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158467 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 gcccaggcccaccaccagcccgccg 274 |||||| |||||||||||||||||| Sbjct: 133638 gcccagccccaccaccagcccgccg 133662
>gb|BC086639.1| Mus musculus expressed sequence AW548124, mRNA (cDNA clone MGC:99930 IMAGE:6828629), complete cds Length = 2305 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 228 ccgctgccaggccccggccccggcccaggccc 259 ||||| || ||||||||||||||||| ||||| Sbjct: 136 ccgctccccggccccggccccggccccggccc 105
>ref|XM_462946.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 cagcccgccgcctcccgcggcctc 288 ||||||||||||||||||| |||| Sbjct: 296 cagcccgccgcctcccgcgccctc 273
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 3294 ggacggagggagtatttcat 3313
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 107107 ggacggagggagtatttcat 107126
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 aataatcccggacggagggagtat 38 |||||| ||||||||||||||||| Sbjct: 69817 aataattccggacggagggagtat 69794
>gb|AF108083.1| Homo sapiens chromosome 7 BAC clone F5, complete sequence Length = 65489 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 40001 ggccccggccccggccccggccca 39978
>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11 map R606A, complete sequence Length = 163580 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 cagcccgccgcctcccgcggcctc 288 ||||||||||||||||||| |||| Sbjct: 3904 cagcccgccgcctcccgcgccctc 3881
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 cagcccgccgcctcccgcggcctc 288 ||||||||||||||||||| |||| Sbjct: 46193 cagcccgccgcctcccgcgccctc 46216
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 20486 ggacggagggagtatttcat 20467
>gb|AY644465.1| Saccharum officinarum mitochondrial alternative oxidase 1 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1316 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tcctcctccgcggcgccggctccc 310 ||||||||||| |||||||||||| Sbjct: 122 tcctcctccgccgcgccggctccc 145
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 accaccagcccgccgcctcc 279 |||||||||||||||||||| Sbjct: 71906 accaccagcccgccgcctcc 71925
>ref|XM_424591.1| PREDICTED: Gallus gallus similar to mitogen-activated protein kinase 8 interacting protein 3 isoform 2; JNK-interacting protein 3; JNK/SAPK-associated protein-1; JNK/stress-activated protein kinase-associated protein 1; homolog of Drosophila Sunday driver 2; C-jun-amino-te... (LOC426986), mRNA Length = 4973 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ccaggccccggccccggcccaggc 257 ||||||||||||| |||||||||| Sbjct: 315 ccaggccccggcctcggcccaggc 338
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 gacggagggagtatttcatttcgt 48 |||||||||||||| ||||||||| Sbjct: 14115 gacggagggagtatatcatttcgt 14138
>ref|XM_324166.1| Neurospora crassa OR74A hypothetical protein (NCU04810.1) partial mRNA Length = 1854 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 ccgcctcccgcggcctcctcctcc 295 |||||||||||||| ||||||||| Sbjct: 22 ccgcctcccgcggcatcctcctcc 45
>ref|XM_322175.1| Neurospora crassa OR74A hypothetical protein ( (AF260325) transcription factor PacC [Colletotrichum sublineolum] ) (NCU00090.1) partial mRNA Length = 645 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 51 ggccccggccccggccccggccca 74
>ref|XM_952121.1| Neurospora crassa OR74A hypothetical protein ( (AF260325) transcription factor PacC [Colletotrichum sublineolum] ) (NCU00090.1) partial mRNA Length = 645 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 51 ggccccggccccggccccggccca 74
>ref|XM_952942.1| Neurospora crassa OR74A hypothetical protein (NCU09449.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 1289 gccaggcccaggcccaggcccaggccca 1316
>ref|XM_955343.1| Neurospora crassa OR74A hypothetical protein (NCU04810.1) partial mRNA Length = 1854 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 ccgcctcccgcggcctcctcctcc 295 |||||||||||||| ||||||||| Sbjct: 22 ccgcctcccgcggcatcctcctcc 45
>ref|XM_332140.1| Neurospora crassa OR74A hypothetical protein (NCU09449.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 1289 gccaggcccaggcccaggcccaggccca 1316
>ref|NM_006047.4| Homo sapiens RNA binding motif protein 12 (RBM12), transcript variant 1, mRNA Length = 6640 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2752 ggccccggccccggccctggccca 2775
>ref|NM_152838.2| Homo sapiens RNA binding motif protein 12 (RBM12), transcript variant 2, mRNA Length = 6608 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2720 ggccccggccccggccctggccca 2743
>gb|AC147681.8| Canis Familiaris, clone XX-10A1, complete sequence Length = 160031 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 44447 aggccccggccccggccccggccc 44470
>gb|AY584533.1| Triticum aestivum receptor-like kinase protein (Lrk) mRNA, partial cds Length = 1527 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 tcagacacgctctcactgtc 168 |||||||||||||||||||| Sbjct: 784 tcagacacgctctcactgtc 803
>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence Length = 178774 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 228 ccgctgccaggccccggccccggcccaggccc 259 ||||| || ||||||||||||||||| ||||| Sbjct: 12925 ccgctccccggccccggccccggccccggccc 12894
>gb|AY393888.1| Candida ipomoeae strain UWO(PS)91-672.1 large subunit ribosomal RNA gene, partial sequence Length = 2511 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 1061 gccaggcccaggcccaggcccaggccca 1034
>gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, complete sequence Length = 224129 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ggagggagtatttcatttcg 47 |||||||||||||||||||| Sbjct: 208790 ggagggagtatttcatttcg 208771
>ref|XM_848635.1| PREDICTED: Canis familiaris similar to synaptopodin 2 (LOC611023), mRNA Length = 3957 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 2681 aggccccggccccggccccggccc 2704
>gb|AC005486.2| Homo sapiens PAC clone RP5-1070G24 from 7, complete sequence Length = 157075 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 56260 ggccccggccccggccccggccca 56283
>ref|XM_977323.1| PREDICTED: Mus musculus hypothetical protein LOC669815 (LOC669815), mRNA Length = 918 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 299 aggccccggccccggccccggccc 276
>ref|XM_977671.1| PREDICTED: Mus musculus hypothetical protein LOC674860 (LOC674860), mRNA Length = 891 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 272 aggccccggccccggccccggccc 249
>ref|XM_001004928.1| PREDICTED: Mus musculus hypothetical protein LOC668942 (LOC668942), mRNA Length = 918 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 299 aggccccggccccggccccggccc 276
>gb|AC127296.4| Mus musculus BAC clone RP23-395A17 from chromosome 7, complete sequence Length = 205162 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 atttcgttttacttttgaattcat 65 |||| ||||||||||||||||||| Sbjct: 38989 attttgttttacttttgaattcat 39012
>gb|AC132317.2| Mus musculus BAC clone RP24-241J19 from chromosome 15, complete sequence Length = 171980 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 210 cctgccggcctcccgcatccgctgccag 237 ||||| ||||||| |||||||||||||| Sbjct: 55528 cctgctggcctccagcatccgctgccag 55555
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 ccaggccccggccccggccc 253 |||||||||||||||||||| Sbjct: 60208 ccaggccccggccccggccc 60189
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cggcctcctcctccgcggcg 301 |||||||||||||||||||| Sbjct: 3416 cggcctcctcctccgcggcg 3435
>emb|CR724213.2|CNS0GLQZ Tetraodon nigroviridis full-length cDNA Length = 1208 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 caggcccaccaccagcccgc 272 |||||||||||||||||||| Sbjct: 103 caggcccaccaccagcccgc 84
>emb|CR719074.2|CNS0GHS8 Tetraodon nigroviridis full-length cDNA Length = 1022 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttttacttttgaattcattt 67 |||||||||||||||||||| Sbjct: 798 ttttacttttgaattcattt 817
>gb|AC117809.6| Mus musculus chromosome 19, clone RP24-571N5, complete sequence Length = 216153 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ggagggagtatttcatttcg 47 |||||||||||||||||||| Sbjct: 93562 ggagggagtatttcatttcg 93543
>gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosome 7, complete sequence Length = 190325 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 atttcgttttacttttgaattcat 65 |||| ||||||||||||||||||| Sbjct: 47424 attttgttttacttttgaattcat 47401
>gb|BC115003.1| Homo sapiens cDNA clone MGC:131546 IMAGE:7503983, complete cds Length = 2006 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gccccggccccggcccaggc 257 |||||||||||||||||||| Sbjct: 285 gccccggccccggcccaggc 304
>emb|AL592309.24| Human DNA sequence from clone RP11-293F5 on chromosome 1 Contains a novel gene, a novel pseudogene, a novel gene similar to heparan sulfate 6-O-sulfotransferase 1 (HS6ST1), a pseudogene similar to part of a novel gene, the gene for a hypothetical protein AE2, a profilin 1 (PFN1) pseudogene, the 5' end of the ALPL gene for alkaline phosphatase, liver/bone/kidney and a CpG island, complete sequence Length = 206231 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gttttacttttgaattcatt 66 |||||||||||||||||||| Sbjct: 122438 gttttacttttgaattcatt 122419
>emb|AL590989.15| Human DNA sequence from clone RP11-149P14 on chromosome 1 Contains a pseudogene similar to part of cytochrome b, the 5' end of a novel gene and a CpG island, complete sequence Length = 110121 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 109762 gccaggcccaggcccaggcccaggccca 109789
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 caggcccaccaccagcccgc 272 |||||||||||||||||||| Sbjct: 3294752 caggcccaccaccagcccgc 3294771
>emb|AL109827.8|HSJ309K20 Human DNA sequence from clone RP1-309K20 on chromosome 20 Contains the 5' end of the FER1L4 gene for fer-1-like 4 (C. elegans), the C20orf124 gene for chromosome 20 open reading frame 124, the SPAG4 gene for sperm associated antigen 4, the CPNE1 gene for copine I, the RBM12 gene for RNA binding motif protein 12, the 3' end of the NIFS gene for nitrogen fixation 1 (S. cerevisiae) and four CpG islands, complete sequence Length = 98599 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 58386 ggccccggccccggccctggccca 58363
>emb|AL031735.9|HS69M21 Human DNA sequence from clone RP1-69M21 on chromosome 1p36.21-36.23 Contains the 3'end of a novel gene and a novel gene, complete sequence Length = 125937 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccaggccccggccccggcccaggccca 260 ||||||||| ||||| |||||||||||| Sbjct: 125680 gccaggcccaggcccaggcccaggccca 125653
>emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 in linkage group 1, complete sequence Length = 153891 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ttttacttttgaattcatttcatc 71 ||||| |||||||||||||||||| Sbjct: 149375 ttttagttttgaattcatttcatc 149398
>emb|CR858610.1| Pongo pygmaeus mRNA; cDNA DKFZp469A078 (from clone DKFZp469A078) Length = 3525 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2700 ggccccggccccggccctggccca 2723
>gb|BC059401.1| Homo sapiens hypothetical protein from EUROIMAGE 588495, mRNA (cDNA clone IMAGE:30346383), partial cds Length = 2342 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gccccggccccggcccaggc 257 |||||||||||||||||||| Sbjct: 255 gccccggccccggcccaggc 274
>emb|AL834472.1|HSM805575 Homo sapiens mRNA; cDNA DKFZp762P2310 (from clone DKFZp762P2310) Length = 2511 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 1682 ggccccggccccggccctggccca 1705
>emb|AL833222.1|HSM804533 Homo sapiens mRNA; cDNA DKFZp667H197 (from clone DKFZp667H197) Length = 5079 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2554 ggccccggccccggccctggccca 2577
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 71228 ggacggagggagtatttcat 71209
>emb|AJ851676.1| Gallus gallus mRNA for hypothetical protein, clone 16p8 Length = 2454 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttttacttttgaattcattt 67 |||||||||||||||||||| Sbjct: 997 ttttacttttgaattcattt 1016
>emb|AJ289772.1|HSA289772 Homo sapiens mRNA for RNA binding motif protein 12 (RBM12 gene) Length = 3415 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2566 ggccccggccccggccctggccca 2589
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 135224 ggacggagggagtatttcat 135243
>ref|NM_001012543.1| Gallus gallus Down syndrome critical region gene 2 (DSCR2), mRNA Length = 2454 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttttacttttgaattcattt 67 |||||||||||||||||||| Sbjct: 997 ttttacttttgaattcattt 1016
>gb|AC068213.7| Homo sapiens chromosome 15, clone RP11-628M2, complete sequence Length = 146606 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tcccctcccgccgccgcgct 208 |||||||||||||||||||| Sbjct: 9586 tcccctcccgccgccgcgct 9567
>gb|AF393214.1| Homo sapiens swan mRNA, complete cds; alternatively spliced Length = 4065 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2684 ggccccggccccggccctggccca 2707
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 gcctcccgcatccgctgccaggcc 240 |||||||||||||||||| ||||| Sbjct: 796355 gcctcccgcatccgctgcaaggcc 796332
>gb|AC150911.4| Pan troglodytes BAC clone CH251-489G13 from chromosome 7, complete sequence Length = 200337 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 183920 aggccccggccccggccccggccc 183943
>dbj|AK092239.1| Homo sapiens cDNA FLJ34920 fis, clone NT2RP7002802, highly similar to Homo sapiens HRIHFB2091 mRNA Length = 3769 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2704 ggccccggccccggccctggccca 2727
>dbj|AK074945.1| Homo sapiens cDNA FLJ90464 fis, clone NT2RP3002281 Length = 2336 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 1525 ggccccggccccggccctggccca 1548
>gb|AF508983.1| Chlamydomonas reinhardtii mastigoneme-like protein mRNA, complete cds Length = 6963 Score = 40.1 bits (20), Expect = 4.4 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 264 ccagcccgccgcctcccgcggcctcctcctccgcggcgcc 303 |||||||||||||| || || |||||||||||||| |||| Sbjct: 5916 ccagcccgccgcct-cctcgtcctcctcctccgcgccgcc 5954
>gb|DQ341268.1| Pongo pygmaeus SWAN ribonucleoprotein-like mRNA, complete sequence Length = 3548 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2718 ggccccggccccggccctggccca 2741
>gb|AC019153.13| Mus musculus chromosome 2 clone RP23-286D16, complete sequence Length = 195068 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 163553 aggccccggccccggccccggccc 163576
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gccgccgcgctgcctgccgg 217 |||||||||||||||||||| Sbjct: 3269369 gccgccgcgctgcctgccgg 3269388
>gb|AF345335.1| Homo sapiens SWAN gene, exon 2 and complete cds Length = 4520 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2962 ggccccggccccggccctggccca 2985
>gb|AF345332.1| Homo sapiens SWAN mRNA, complete cds Length = 4097 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2716 ggccccggccccggccctggccca 2739
>gb|AC023302.9| Homo sapiens chromosome 15, clone RP11-28H5, complete sequence Length = 151927 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gccccggccccggcccaggc 257 |||||||||||||||||||| Sbjct: 119798 gccccggccccggcccaggc 119779
>ref|XM_937545.1| PREDICTED: Homo sapiens hypothetical protein from EUROIMAGE 588495 (LOC58489), mRNA Length = 2758 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gccccggccccggcccaggc 257 |||||||||||||||||||| Sbjct: 688 gccccggccccggcccaggc 707
>ref|XM_051862.7| PREDICTED: Homo sapiens hypothetical protein from EUROIMAGE 588495 (LOC58489), mRNA Length = 2758 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gccccggccccggcccaggc 257 |||||||||||||||||||| Sbjct: 688 gccccggccccggcccaggc 707
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 141702 ggacggagggagtatttcat 141683
>gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosome 17, complete sequence Length = 161377 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 228 ccgctgccaggccccggccccggcccaggccc 259 ||||| || ||||||||||||||||| ||||| Sbjct: 82079 ccgctccccggccccggccccggccccggccc 82048
>dbj|AK016752.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933409F16 product:hypothetical protein, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 279 ccgcggcctcctcctccgcggcgccggc 306 |||| |||||||||||||||||| |||| Sbjct: 217 ccgccgcctcctcctccgcggcggcggc 244
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 24511597 ggacggagggagtatttcat 24511578
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 cccgccgcctcccgcggcctcctc 291 |||||| ||||||||||||||||| Sbjct: 19938843 cccgcctcctcccgcggcctcctc 19938820
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 cctcctcctccgcggcgccg 304 |||||||||||||||||||| Sbjct: 23084638 cctcctcctccgcggcgccg 23084657
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 34363404 ggacggagggagtatttcat 34363423 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 acggagggagtatttcattt 45 |||||||||||||||||||| Sbjct: 32375714 acggagggagtatttcattt 32375695
>gb|AF133300.2|AF133300 Mus musculus MOR 3'Beta1, MOR 3'Beta2, MOR 3'Beta3, and MOR 3'Beta4 genes, complete cds; Cbx3 pseudogene, complete sequence; and MOR 3'Beta5 and MOR 3'Beta6 genes, complete cds Length = 92000 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 atttcgttttacttttgaattcat 65 |||| ||||||||||||||||||| Sbjct: 76358 attttgttttacttttgaattcat 76381
>gb|AC093802.3| Homo sapiens BAC clone RP11-315F22 from 2, complete sequence Length = 165535 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 |||||| ||||||||||||||||| Sbjct: 41419 ggccccagccccggcccaggccca 41442
>gb|AC127029.12| Homo sapiens chromosome 17, clone CTC-264K15, complete sequence Length = 101990 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ccaggccccggccccggccc 253 |||||||||||||||||||| Sbjct: 59560 ccaggccccggccccggccc 59579
>ref|NM_134117.1| Mus musculus expressed sequence AW548124 (AW548124), mRNA Length = 2305 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 228 ccgctgccaggccccggccccggcccaggccc 259 ||||| || ||||||||||||||||| ||||| Sbjct: 136 ccgctccccggccccggccccggccccggccc 105
>gb|AF459085.1| Hordeum vulgare SNF2P (Snf2P) gene, complete cds Length = 7963 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 aataatcccggacggagggagtat 38 |||||| ||||||||||||||||| Sbjct: 1769 aataattccggacggagggagtat 1746
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 61051 ggacggagggagtatttcat 61070
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 cctcctcctccgcggcgccg 304 |||||||||||||||||||| Sbjct: 35286 cctcctcctccgcggcgccg 35305
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcatttcg 47 |||||||| ||||||||||||||| Sbjct: 29875 ggacggagagagtatttcatttcg 29898
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 acggagggagtatttcattt 45 |||||||||||||||||||| Sbjct: 37227 acggagggagtatttcattt 37208
>dbj|AK122408.1| Mus musculus mRNA for mKIAA0964 protein Length = 6246 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 65 aggccccggccccggccccggccc 42
>dbj|AK120303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052L17, full insert sequence Length = 2973 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 cctcctcctccgcggcgccg 304 |||||||||||||||||||| Sbjct: 460 cctcctcctccgcggcgccg 479
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 acggagggagtatttcattt 45 |||||||||||||||||||| Sbjct: 21106 acggagggagtatttcattt 21087
>dbj|AK026963.1| Homo sapiens cDNA: FLJ23310 fis, clone HEP11655 Length = 3228 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2150 ggccccggccccggccctggccca 2173
>dbj|AK099395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J11, full insert sequence Length = 1857 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 cccgccgcctcccgcggcctcctc 291 |||||| ||||||||||||||||| Sbjct: 483 cccgcctcctcccgcggcctcctc 506
>emb|AJ326767.1|HSA326767 Homo sapiens genomic sequence surrounding NotI site, clone NR5-IE18C Length = 693 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 62 ggccccggccccggccccggccca 39
>dbj|AK069228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014N04, full insert sequence Length = 1776 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 accaccagcccgccgcctcc 279 |||||||||||||||||||| Sbjct: 63 accaccagcccgccgcctcc 82
>dbj|AK061613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B07, full insert sequence Length = 1729 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 cccgccgcctcccgcggcctcctc 291 |||||| ||||||||||||||||| Sbjct: 477 cccgcctcctcccgcggcctcctc 500
>dbj|AP002387.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-660L16, complete sequence Length = 170523 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 ccaggccccggccccggccc 253 |||||||||||||||||||| Sbjct: 75114 ccaggccccggccccggccc 75095
>gb|AC005803.1|AC005803 Homo sapiens chromosome 17, clone hRPK.214_C_8, complete sequence Length = 162473 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ccaggccccggccccggccc 253 |||||||||||||||||||| Sbjct: 31133 ccaggccccggccccggccc 31152
>gb|AC161465.3| Gallus gallus BAC clone CH261-97D4 from chromosome ul, complete sequence Length = 213337 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttttacttttgaattcattt 67 |||||||||||||||||||| Sbjct: 83606 ttttacttttgaattcattt 83587
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 ccccggccccggcccaggcccacc 262 ||||||||||||||||||| |||| Sbjct: 954676 ccccggccccggcccaggcgcacc 954699
>gb|M14001.1|SH1GGP50 Pseudorabies virus (PRV) glycoprotein gp50 gene, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 987 aggccccggccccggccccggccc 1010
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 cccgccgcctcccgcggcctcctc 291 |||||| ||||||||||||||||| Sbjct: 19865057 cccgcctcctcccgcggcctcctc 19865034
>emb|BX004793.12| Mouse DNA sequence from clone RP23-188D9 on chromosome 2, complete sequence Length = 161514 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 aggccccggccccggcccaggccc 259 |||||||||||||||||| ||||| Sbjct: 33516 aggccccggccccggccccggccc 33493
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 cccgccgcctcccgcggcctcctc 291 |||||| ||||||||||||||||| Sbjct: 88417 cccgcctcctcccgcggcctcctc 88440
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 104919 ggacggagggagtatttcat 104900
>gb|AC152181.1| Mus musculus BAC clone RP24-321P19 from 15, complete sequence Length = 187733 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 210 cctgccggcctcccgcatccgctgccag 237 ||||| ||||||| |||||||||||||| Sbjct: 76934 cctgctggcctccagcatccgctgccag 76907
>gb|BC013981.2| Homo sapiens RNA binding motif protein 12, mRNA (cDNA clone MGC:19528 IMAGE:3845090), complete cds Length = 3583 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2740 ggccccggccccggccctggccca 2763
>gb|BC012787.2| Homo sapiens RNA binding motif protein 12, mRNA (cDNA clone MGC:16487 IMAGE:3956772), complete cds Length = 3586 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2740 ggccccggccccggccctggccca 2763
>dbj|AP006123.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT41E18, TM0207, complete sequence Length = 115290 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 acggagggagtatttcattt 45 |||||||||||||||||||| Sbjct: 103519 acggagggagtatttcattt 103538
>gb|AC152164.14| Mus musculus chromosome 8, clone RP24-118N20, complete sequence Length = 185586 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atttcatttcgttttacttt 56 |||||||||||||||||||| Sbjct: 25036 atttcatttcgttttacttt 25017
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ggacggagggagtatttcat 43 |||||||||||||||||||| Sbjct: 39627 ggacggagggagtatttcat 39646
>emb|AL772335.5| Mouse DNA sequence from clone RP23-415F19 on chromosome 4, complete sequence Length = 201702 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ttacttttgaattcatttca 69 |||||||||||||||||||| Sbjct: 176224 ttacttttgaattcatttca 176205
>gb|AC018413.10| Homo sapiens chromosome 18, clone RP11-17M16, complete sequence Length = 112797 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggcccaccac 264 ||||||||||||||||| ||||| |||| Sbjct: 69137 ggccccggccccggccccggccctccac 69164
>gb|M88116.1|CALMYCG Callithrix jacchus Myc gene, complete cds Length = 6577 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ccgccgcctcccgcggcctc 288 |||||||||||||||||||| Sbjct: 2961 ccgccgcctcccgcggcctc 2980
>dbj|AB030205.1| Mus musculus mRNA, partail sequence, clone:2-77 Length = 689 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ccgcggcctcctcctccgcggcgc 302 ||||| |||||||||||||||||| Sbjct: 43 ccgcgacctcctcctccgcggcgc 20
>dbj|AB015336.1| Homo sapiens HRIHFB2091 mRNA, partial cds Length = 1436 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 820 ggccccggccccggccctggccca 843
>dbj|AB018308.2| Homo sapiens mRNA for KIAA0765 protein, partial cds Length = 5332 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 ggccccggccccggcccaggccca 260 ||||||||||||||||| |||||| Sbjct: 2639 ggccccggccccggccctggccca 2662 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,556,186 Number of Sequences: 3902068 Number of extensions: 3556186 Number of successful extensions: 106828 Number of sequences better than 10.0: 201 Number of HSP's better than 10.0 without gapping: 208 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 101317 Number of HSP's gapped (non-prelim): 5436 length of query: 334 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 312 effective length of database: 17,147,199,772 effective search space: 5349926328864 effective search space used: 5349926328864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
