>NNP1_MOUSE (P56183) NNP-1 protein (Novel nuclear protein 1) (Nop52)|
          Length = 494

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 11/63 (17%)
 Frame = +2

Query: 5   PPRPAPPGMAGS-----------DDDEAAAPIHRLPSDALHNVLLRLQLRDAVACRPVSR 151
           PP+  P G A             DD+E A P+ +   +AL N L +L  R +   +   R
Sbjct: 320 PPKKLPAGTAHRAGPEADKEQAWDDEENAGPVLQFDYEALANRLFKLASRQSTPSQNRKR 379

Query: 152 LFR 160
           L++
Sbjct: 380 LYK 382


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.305    0.123    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,463,143
Number of Sequences: 219361
Number of extensions: 165059
Number of successful extensions: 554
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)