ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet46c02 |
|---|---|
| Clone Library Name | barley_pub |
>Y4597_ARATH (P0C042) Hypothetical protein At4g15970| Length = 367 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/35 (48%), Positives = 25/35 (71%) Frame = +1 Query: 286 ELQRLLREVADEHKTVIMTSVNEAWAAEGSLLDLF 390 +L ++L E A E KTVI+T++N+AW+ S DLF Sbjct: 41 KLGKILTEAATEDKTVIITTLNKAWSEPNSTFDLF 75
>PRP5_CANGA (Q6FML5) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 32.3 bits (72), Expect = 0.28 Identities = 21/75 (28%), Positives = 32/75 (42%) Frame = +1 Query: 160 VNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHKTVIM 339 V P A+ E NHTSS ++E N + Q+ + V DE K + Sbjct: 65 VKSDQQTPPATQSEINHTSSVRLE---------ENIQGIKRKKRQKRVSNVFDEVKPINS 115 Query: 340 TSVNEAWAAEGSLLD 384 T N+A +E +L+ Sbjct: 116 TPTNDAQLSESDILE 130
>YCF2_OENVI (P31569) Protein ycf2 (Fragment)| Length = 630 Score = 31.2 bits (69), Expect = 0.63 Identities = 21/82 (25%), Positives = 29/82 (35%) Frame = +1 Query: 124 GTEPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLL 303 GTE G V GT + +E T +VEG E + E+E++ Sbjct: 188 GTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTE 247 Query: 304 REVADEHKTVIMTSVNEAWAAE 369 EV + V T E E Sbjct: 248 EEVEGTEEEVEGTEDEEVEGTE 269 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/70 (25%), Positives = 26/70 (37%) Frame = +1 Query: 124 GTEPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLL 303 GTE G V GT + +E T +VEG E + E+E++ Sbjct: 231 GTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTE 290 Query: 304 REVADEHKTV 333 EV + V Sbjct: 291 EEVEGTEEEV 300 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/70 (25%), Positives = 26/70 (37%) Frame = +1 Query: 124 GTEPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLL 303 GTE G V GT V +E + +VEG E + E+E++ Sbjct: 245 GTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTE 304 Query: 304 REVADEHKTV 333 EV + V Sbjct: 305 EEVEGTEEEV 314
>HIS1_YEAST (P00498) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 297 Score = 31.2 bits (69), Expect = 0.63 Identities = 17/58 (29%), Positives = 26/58 (44%) Frame = +1 Query: 211 TSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHKTVIMTSVNEAWAAEGSLLD 384 T S++EGV + Q A ED+L LL+ I +E W A S+++ Sbjct: 211 TIKSRIEGVMTAQRFVSCIYNAPEDKLPELLKVTPGRRAPTISKIDDEGWVAVSSMIE 268
>ALDH2_BOVIN (P20000) Aldehyde dehydrogenase, mitochondrial precursor (EC| 1.2.1.3) (ALDH class 2) (ALDHI) (ALDH-E2) Length = 520 Score = 31.2 bits (69), Expect = 0.63 Identities = 19/70 (27%), Positives = 30/70 (42%) Frame = +1 Query: 181 PVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHKTVIMTSVNEAW 360 P A A A+H KV S + A + L+R+ E+ + +IM+ + W Sbjct: 246 PTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDW 305 Query: 361 AAEGSLLDLF 390 A E + LF Sbjct: 306 AVEQAHFALF 315
>Y1270_CORGL (P42531) Hypothetical protein Cgl1270/cg1434| Length = 491 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Frame = -1 Query: 245 GEATPSTLLELVWLASWAEA---TGTAMVPLTQLDMPAADGSVPIPAEDMKKMSTPATDA 75 G +PST S A T + VP T + P + +V E ++ STPAT Sbjct: 391 GWLSPSTATSTAVTTSETSAPVSTPSMTVPTTVEETPTMESNV----ETQQETSTPATAT 446 Query: 74 PRRSDT 57 P+R+DT Sbjct: 447 PQRADT 452
>LMO6_HUMAN (O43900) LIM domain only protein 6 (Triple LIM domain protein 6)| Length = 615 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = +1 Query: 94 LIFFMSSAGIGTEPSAAGIS--SWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNA 267 LIF + +G+EP+A G S SW G + P+A A A+ ++ + + A Sbjct: 359 LIFCSRACSLGSEPTAPGPSRRSWSAGPVTAPLA-ASTASFSAVKGASETTTKGTSTELA 417 Query: 268 SQAAEDELQRLLREVADEH 324 +E R LR H Sbjct: 418 PATGPEEPSRFLRGAPHRH 436
>PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7.11.1)| Length = 543 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = -3 Query: 120 PGRGHEEDEHPGDG--RPEEERHQLVQQVRLDPHHVYVRARP 1 PG+G ED HP R +R++ Q LDP+ +R RP Sbjct: 364 PGQGGPEDPHPWQNQLRAARDRNEQTQVQYLDPNQDPLRRRP 405
>ALDH2_RAT (P11884) Aldehyde dehydrogenase, mitochondrial precursor (EC| 1.2.1.3) (ALDH class 2) (ALDH1) (ALDH-E2) Length = 519 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/70 (27%), Positives = 29/70 (41%) Frame = +1 Query: 181 PVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHKTVIMTSVNEAW 360 P A A A+H KV S + A L+R+ E+ + +IM+ + W Sbjct: 245 PTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDW 304 Query: 361 AAEGSLLDLF 390 A E + LF Sbjct: 305 AVEQAHFALF 314
>ALDH2_MOUSE (P47738) Aldehyde dehydrogenase, mitochondrial precursor (EC| 1.2.1.3) (ALDH class 2) (AHD-M1) (ALDHI) (ALDH-E2) Length = 519 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/70 (27%), Positives = 29/70 (41%) Frame = +1 Query: 181 PVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHKTVIMTSVNEAW 360 P A A A+H KV S + A L+R+ E+ + +IM+ + W Sbjct: 245 PTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDW 304 Query: 361 AAEGSLLDLF 390 A E + LF Sbjct: 305 AVEQAHFALF 314
>ALDH2_MESAU (P81178) Aldehyde dehydrogenase, mitochondrial (EC 1.2.1.3) (ALDH| class 2) (ALDH1) (ALDH-E2) Length = 500 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/70 (27%), Positives = 29/70 (41%) Frame = +1 Query: 181 PVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHKTVIMTSVNEAW 360 P A A A+H KV S + A L+R+ E+ + +IM+ + W Sbjct: 226 PTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDW 285 Query: 361 AAEGSLLDLF 390 A E + LF Sbjct: 286 AVEQAHFALF 295
>OXAA_CAUCR (Q9AA40) Inner membrane protein oxaA| Length = 615 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 13/61 (21%) Frame = -1 Query: 176 AMVPLTQLDMPAADGSVPIPA------------EDMKKMSTPAT-DAPRRSDTSWFSRFG 36 A+ P ++D PA GS+ + E KK S P P ++ +WF+ FG Sbjct: 74 ALSPRIEVDTPALSGSIALKGARIDDLFLRKYDETTKKDSPPVELFRPEGAEHAWFADFG 133 Query: 35 W 33 W Sbjct: 134 W 134
>RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif protein 10)| (DXS8237E) Length = 929 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = -3 Query: 192 RSNRHRHGSIDPAGYAGRGRLRADPGRGHE-EDEHPGDGRPEEERHQLVQQVRLDP 28 R RHRH P G+ G R R + E+E + EEE+ + +R+ P Sbjct: 82 RRRRHRHSPTGPPGFPRDGDYRDQDYRTEQGEEEEEEEDEEEEEKASNIVMLRMLP 137
>LIPE_AERHY (P40600) Extracellular lipase precursor (EC 3.1.1.3)| (Triacylglycerol lipase) Length = 684 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = -3 Query: 183 RHRHGSIDPAGYAGRGRLRADPGRGHEEDEHPGDGRPEEERHQLVQQVRLDP 28 R H S+ PA AGRG +RAD +H R L Q+ RL P Sbjct: 417 RAEHWSLQPAADAGRGAIRADACLRQGCPQHHHGCHHLSARRDLGQRERLRP 468
>UVRC_GEOSL (Q747I7) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 613 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 11/54 (20%) Frame = -3 Query: 198 LGRSNRHRHGSIDPAGYAGRGRLRADPGRG-----HE------EDEHPGDGRPE 70 +G R ++G+ D AGY R R+R PG HE D H GDGRP+ Sbjct: 402 VGSRVRFQNGAPDKAGYR-RYRIRTVPGTDDFAMMHEVLSRRFRDGHGGDGRPD 454
>ALDH2_HUMAN (P05091) Aldehyde dehydrogenase, mitochondrial precursor (EC| 1.2.1.3) (ALDH class 2) (ALDHI) (ALDH-E2) Length = 517 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/70 (27%), Positives = 29/70 (41%) Frame = +1 Query: 181 PVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHKTVIMTSVNEAW 360 P A A A+H KV S + A L+R+ E+ + +IM+ + W Sbjct: 243 PTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDW 302 Query: 361 AAEGSLLDLF 390 A E + LF Sbjct: 303 AVEQAHFALF 312
>XKDK_BACSU (P54331) Phage-like element PBSX protein xkdK| Length = 464 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/73 (28%), Positives = 34/73 (46%) Frame = +1 Query: 166 GTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHKTVIMTS 345 GT+A+PVAS+ T S ++S ++ + +D LLRE KTV+M Sbjct: 35 GTVALPVASSWGEAKTFVS----ISSVEDLNKKVGLSIDDPSLLLLREAKKNAKTVLMYR 90 Query: 346 VNEAWAAEGSLLD 384 + E A + + Sbjct: 91 LTEGVRASADIAE 103
>DNAA_STRAW (Q82FD8) Chromosomal replication initiator protein dnaA| Length = 653 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%) Frame = -3 Query: 153 GYAGRGRLRADPGRGHEEDEH---PGDGRPEEERHQL 52 GY G GR RAD R D H PGD P QL Sbjct: 129 GYEGYGRHRADDHRQGHNDRHQGGPGDQLPPSRGDQL 165
>YCF2_OENPI (P31568) Protein ycf2 (Fragment)| Length = 721 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/70 (25%), Positives = 26/70 (37%) Frame = +1 Query: 124 GTEPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLL 303 GTE G V GT V +E + +VEG E + E+E++ Sbjct: 319 GTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTE 378 Query: 304 REVADEHKTV 333 EV + V Sbjct: 379 EEVEGTEEEV 388 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/55 (29%), Positives = 20/55 (36%) Frame = +1 Query: 124 GTEPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDE 288 GTE G V GT + +E T +VEG E + EDE Sbjct: 261 GTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEDE 315 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 1/83 (1%) Frame = +1 Query: 124 GTEPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQ-EACHNASQAAEDELQRL 300 GTE G V GT + +E T +VEG + E + E+E++ Sbjct: 217 GTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEDEEVEGTEEEVEGTEEEVEGT 276 Query: 301 LREVADEHKTVIMTSVNEAWAAE 369 EV + V T E E Sbjct: 277 EEEVEGTEEEVEGTEDEEVEGTE 299 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/55 (29%), Positives = 20/55 (36%) Frame = +1 Query: 124 GTEPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDE 288 GTE G V GT V +E + +VEG E + EDE Sbjct: 195 GTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDE 249 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/62 (25%), Positives = 23/62 (37%) Frame = +1 Query: 127 TEPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLR 306 TE G V GT + +E T +VEG E + E+E++ Sbjct: 182 TEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEE 241 Query: 307 EV 312 EV Sbjct: 242 EV 243
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -3 Query: 192 RSNRHRHGSIDPAGYAGRGRLRADPGRGHEEDEHPGDGRP 73 R RHRHG+ PA Y G R R E+ G G P Sbjct: 1002 RRRRHRHGA--PATYEGDARREDKERRHRRRKENQGSGVP 1039
>EFG2_MOUSE (Q8R2Q4) Elongation factor G 2, mitochondrial precursor (mEF-G 2)| (Elongation factor G2) Length = 777 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 Query: 232 GVASPQEACHNASQAAEDELQRLLREVADEH 324 G +PQ A HN ++ + + RLL AD+H Sbjct: 389 GTLTPQLAVHNINRNCTERMSRLLLPFADQH 419
>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)| (Zona occludens 2 protein) (Tight junction protein 2) Length = 1190 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 156 AGYAGRGRLRADPGRGHEEDEHPGDGRPEE 67 +GY+ R RL + GR ++ P GRP E Sbjct: 153 SGYSERSRLNSHGGRSRSWEDSPERGRPHE 182
>MANA_RHOMR (P49425) Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)| (Endo-(1,4)-beta-mannanase) Length = 1021 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 18/63 (28%) Frame = -3 Query: 186 NRHRHGSIDPAGYAGRGRLRADPG------------RGH------EEDEHPGDGRPEEER 61 N RHG IDP GR R P RGH + DEHPG GRP R Sbjct: 274 NLFRHG-IDPCRV---GRCRRSPSELHGMGCADVRARGHGRHMRGQRDEHPGRGRPCARR 329 Query: 60 HQL 52 + Sbjct: 330 RHV 332
>CATA_RHOCA (P37743) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 576 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +1 Query: 73 GASVAGVLIFFMSSAGIGTEPSAAGISSW 159 GASVA V++ + +G E +AAG+S W Sbjct: 518 GASVADVIVL---AGNLGVEQAAAGVSRW 543
>CEBPB_HUMAN (P17676) CCAAT/enhancer-binding protein beta (C/EBP beta) (Nuclear| factor NF-IL6) (Transcription factor 5) Length = 345 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = +1 Query: 166 GTMAVPVASAQEANHTSSSKVEGVASPQE------ACHNASQAAEDELQRLLREVADEH 324 G AVP S+ + +SSS G SP + AC+ + A +++ ++ D+H Sbjct: 212 GYQAVPSGSSGSLSTSSSSSPPGTPSPADAKAPPTACYAGAAPAPSQVKSKAKKTVDKH 270
>R1AB_CVMA5 (P16342) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44); 3C-like proteinase Length = 7176 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +1 Query: 130 EPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQ-EACHNASQAAEDELQRL-L 303 EP A G + P+ASA+E +S EG+A + C +A A D+++ + Sbjct: 1005 EPDAVGSQT--------PIASAEETEVGEASDREGIAEAKATVCADAVDACPDQVEAFEI 1056 Query: 304 REVADEHKTVIMTSVN 351 +V D + T +N Sbjct: 1057 EKVEDSILDELQTELN 1072
>ABCB7_HUMAN (O75027) ATP-binding cassette sub-family B member 7, mitochondrial| precursor (ATP-binding cassette transporter 7) (ABC transporter 7 protein) Length = 752 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/55 (27%), Positives = 29/55 (52%) Frame = +1 Query: 163 NGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHK 327 +G +A P + E HT SS+V+ +P+ + + E+E ++L E+ + K Sbjct: 691 HGLLANPHSIYSEMWHTQSSRVQNHDNPKWEAKKENISKEEERKKLQEEIVNSVK 745
>OLR1_HUMAN (P78380) Oxidized low-density lipoprotein receptor 1 (Ox-LDL| receptor 1) (Lectin-type oxidized LDL receptor 1) (Lectin-like oxidized LDL receptor 1) (Lectin-like oxLDL receptor 1) (LOX-1) (hLOX-1) [Contains: Oxidized low-density lipoprotein re Length = 273 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +1 Query: 196 QEANHT-SSSKVEGVASPQEACHNASQAAEDELQRLLREVA 315 ++AN T K+EG S ++ ASQ +E+EL+ ++ +A Sbjct: 70 EQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLA 110
>HSP70_HYDMA (Q05944) Heat shock 70 kDa protein| Length = 654 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 223 KVEGVASPQEACHNASQAAEDELQRLLREVADEHKTVIMTSVNE 354 KV+ S + C+N Q EDE ++ ++++E K I+ NE Sbjct: 542 KVQAKNSLESYCYNMKQTVEDE--KVKGKISEEDKKTIIKKCNE 583
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/52 (28%), Positives = 16/52 (30%) Frame = -3 Query: 177 RHGSIDPAGYAGRGRLRADPGRGHEEDEHPGDGRPEEERHQLVQQVRLDPHH 22 RH P G G GH HP G E H Q + HH Sbjct: 553 RHAHHGPGGEEEGGEEELTVKAGHHVASHPPPGHRSREGHAEEHQTEVPGHH 604
>ARLY_SHIFL (P59619) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 457 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = +1 Query: 130 EPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEA-CHNASQ---AAEDELQR 297 E A I SWV G + V + HT S+ + VA+ + C + A +LQ Sbjct: 78 ESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQS 137 Query: 298 LLREVADEHKTVIM 339 L E A ++ +M Sbjct: 138 ALVETAQNNQDAVM 151
>ARLY_ECOLI (P11447) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 457 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = +1 Query: 130 EPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEA-CHNASQ---AAEDELQR 297 E A I SWV G + V + HT S+ + VA+ + C + A +LQ Sbjct: 78 ESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQS 137 Query: 298 LLREVADEHKTVIM 339 L E A ++ +M Sbjct: 138 ALVETAQNNQDAVM 151
>ARLY_ECOL6 (Q8FB96) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 457 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = +1 Query: 130 EPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEA-CHNASQ---AAEDELQR 297 E A I SWV G + V + HT S+ + VA+ + C + A +LQ Sbjct: 78 ESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQS 137 Query: 298 LLREVADEHKTVIM 339 L E A ++ +M Sbjct: 138 ALVETAQNNQDAVM 151
>ARLY_ECO57 (Q8X730) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 457 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = +1 Query: 130 EPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEA-CHNASQ---AAEDELQR 297 E A I SWV G + V + HT S+ + VA+ + C + A +LQ Sbjct: 78 ESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQS 137 Query: 298 LLREVADEHKTVIM 339 L E A ++ +M Sbjct: 138 ALVETAQNNQDAVM 151
>TRK1_SACBA (P28569) High-affinity potassium transport protein| Length = 1241 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Frame = -3 Query: 204 SLLGRSNRHRHGSIDPAGYAGRGRLRADPGRGHEEDEHPG--DGRPEEERH---QLVQQV 40 S+L R N HR+GS D + + + H +++ G EEE + Sbjct: 671 SILHRDNSHRNGSEDVSSDSNETTYPLNGNNDHSQNDANGYPTYNDEEEGYYGLHFDSDY 730 Query: 39 RLDPHH 22 LDPHH Sbjct: 731 NLDPHH 736
>ZO3_CANFA (O62683) Tight junction protein ZO-3 (Zonula occludens 3 protein)| (Zona occludens 3 protein) (Tight junction protein 3) Length = 898 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Frame = -3 Query: 156 AGYAGRGRL----RADPGRGHEEDEHPGDGRPEEER 61 AG +GRGR AD G+G++ D G GR ++R Sbjct: 102 AGTSGRGRQGLEEEADCGQGYDGDTSSGSGRSWDKR 137
>NAD1_CAEEL (Q93655) Sodium-dependent low-affinity dicarboxylate transporter 1| (Na(+)/dicarboxylate cotransporter 1) (NaDC-1) (ceNaDC1) Length = 582 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Frame = +1 Query: 73 GASVAGVLIFFMSSAGIGTEPSAAGISSWVNGT----MAVPVASAQEANHTSSSKVEGVA 240 G+ A V+ FM G +S W++ T + VP+ + S+ ++E + Sbjct: 124 GSEPARVMAGFMGVTGF--------LSMWISNTATTALMVPILQSVITELVSNHRMEDLV 175 Query: 241 SPQEACHNASQAAEDELQRL 300 + EA HN+S+ ++RL Sbjct: 176 ALCEAHHNSSRKHSVGMRRL 195
>Y1781_XANAC (Q8PLL4) UPF0343 protein XAC1781| Length = 305 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 10/74 (13%) Frame = -1 Query: 206 LASWAEATGTAMVPLTQLDMPAADGSVPIPAEDM----------KKMSTPATDAPRRSDT 57 + W + GT P +Q + +P A+ + + ++TP A RR D Sbjct: 183 VVQWLQDHGTYATPHSQRSVAQVRVELPADAQRLAIQQLVGLCEQALATPVQAAVRRPDE 242 Query: 56 SWFSRFGWIPIMCM 15 F+R +MC+ Sbjct: 243 QAFARLNGANLMCV 256
>ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein 2 (Fragment)| Length = 1168 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%) Frame = -3 Query: 207 VSLLGRSNRHRHGSID------PAGYAGRGRLRADPGRGHEEDEHPGDGRPEEER 61 ++LLG NR G + A RA+ RG EDE GDG + E+ Sbjct: 175 LALLGSENREAAGRLHRLLPQVDAVLRSLRATRAEGSRGSVEDEPSGDGEQDAEK 229
>CMC1_PONPY (Q5RBC8) Calcium-binding mitochondrial carrier protein Aralar1| (Mitochondrial aspartate glutamate carrier 1) (Solute carrier family 25 member 12) Length = 678 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/59 (23%), Positives = 28/59 (47%) Frame = -1 Query: 248 WGEATPSTLLELVWLASWAEATGTAMVPLTQLDMPAADGSVPIPAEDMKKMSTPATDAP 72 +G+ TP + L LA A+G + + P A+G++P ++++ +P P Sbjct: 260 YGQVTPLEIDILYQLADLYNASGRLTLADIERIAPLAEGALPYNLAELQRQQSPGLGRP 318
>CMC1_HUMAN (O75746) Calcium-binding mitochondrial carrier protein Aralar1| (Mitochondrial aspartate glutamate carrier 1) (Solute carrier family 25 member 12) Length = 678 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/59 (23%), Positives = 28/59 (47%) Frame = -1 Query: 248 WGEATPSTLLELVWLASWAEATGTAMVPLTQLDMPAADGSVPIPAEDMKKMSTPATDAP 72 +G+ TP + L LA A+G + + P A+G++P ++++ +P P Sbjct: 260 YGQVTPLEIDILYQLADLYNASGRLTLADIERIAPLAEGALPYNLAELQRQQSPGLGRP 318
>Y305_METJA (Q57753) Hypothetical protein MJ0305| Length = 395 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +1 Query: 154 SWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAAEDELQRLLREVADEHKTV 333 +W+ G + V +A A A V G A + C +S + DEL RLL+ + V Sbjct: 88 TWIRGLLKVLLAGAVIA-------VGGSAGKEGPCVQSSASFADELYRLLK--LKNRELV 138 Query: 334 IMTSV 348 I+T + Sbjct: 139 IITGI 143
>CEBPB_BOVIN (O02755) CCAAT/enhancer-binding protein beta (C/EBP beta)| Length = 348 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Frame = +1 Query: 166 GTMAVPVASAQEANHTSSSKVEGVASPQE--------ACHNASQAAEDELQRLLREVADE 321 G AVP S+ + +SSS G SP + AC+ + A +++ ++ D+ Sbjct: 213 GYQAVPSGSSGSLSTSSSSSPPGTPSPADAKATPAAAACYAGAAPAPSQVKSKAKKTVDK 272 Query: 322 H 324 H Sbjct: 273 H 273
>UVH3_ARATH (Q9ATY5) DNA-repair protein UVH3 (EC 3.1.-.-) (UV hypersensitive| protein 3) (XPG homolog) (ERCC5 homolog) (RAD2 homolog) (AtUVH3) (AtXPG) (AtRAD2) Length = 1479 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 10/86 (11%) Frame = +1 Query: 97 IFFMSSAGIGTEPSAAGISSWVNGTMAV-------PVASAQEANHTSS---SKVEGVASP 246 I + ++G +E S ++ +G + P + + +H S SKV+ V SP Sbjct: 696 ITILKTSGAISEQSNTSVAGNADGQKGITKQFGTHPSSGSNNVSHAVSNKLSKVKSVISP 755 Query: 247 QEACHNASQAAEDELQRLLREVADEH 324 ++A + ASQ R+L +A +H Sbjct: 756 EKALNVASQ------NRMLSTMAKQH 775
>EFG2_HUMAN (Q969S9) Elongation factor G 2, mitochondrial precursor (mEF-G 2)| (Elongation factor G2) Length = 779 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +1 Query: 232 GVASPQEACHNASQAAEDELQRLLREVADEH 324 G PQ A HN + + + RLL AD+H Sbjct: 391 GTIKPQLAIHNINGNCTERISRLLLPFADQH 421
>APOA5_HUMAN (Q6Q788) Apolipoprotein A-V precursor (Apolipoprotein A5) (ApoAV)| (ApoA-V) (Regeneration-associated protein 3) Length = 366 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +1 Query: 286 ELQRLLREVADEHKTVIMTSVNEAWA 363 ELQ LR V ++ K ++ V+EAWA Sbjct: 146 ELQEQLRVVGEDTKAQLLGGVDEAWA 171
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 109 SSAGIGTEPSAAGISSWVNGTMAVPVASAQEANHTSSSKVEGVASPQEACHNASQAA 279 SS+ T PS+ SS + T + +++Q + TSSS SP ++S + Sbjct: 220 SSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTS--TSPSSTSTSSSSTS 274
>CMC1_MOUSE (Q8BH59) Calcium-binding mitochondrial carrier protein Aralar1| (Mitochondrial aspartate glutamate carrier 1) (Solute carrier family 25 member 12) Length = 677 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/59 (23%), Positives = 28/59 (47%) Frame = -1 Query: 248 WGEATPSTLLELVWLASWAEATGTAMVPLTQLDMPAADGSVPIPAEDMKKMSTPATDAP 72 +G+ TP + L LA A+G + + P A+G++P ++++ +P P Sbjct: 260 YGQVTPLEIDILYQLADLYNASGRLTLADIERIAPLAEGALPYNLAELQRQQSPGLGRP 318 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.123 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,698,075 Number of Sequences: 219361 Number of extensions: 632017 Number of successful extensions: 2653 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 2530 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2644 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
