ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet46b11 |
|---|---|
| Clone Library Name | barley_pub |
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 151 bits (382), Expect = 7e-37 Identities = 66/77 (85%), Positives = 71/77 (92%) Frame = +2 Query: 239 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 418 KKSWIPA KS ++P WLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV Sbjct: 52 KKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 111 Query: 419 LGIFIGQAYSGVPWFEA 469 LGIF+GQA+SG+PWFEA Sbjct: 112 LGIFVGQAWSGIPWFEA 128
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 149 bits (375), Expect = 5e-36 Identities = 64/77 (83%), Positives = 70/77 (90%) Frame = +2 Query: 239 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 418 KKSWIPA K F++P WLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAM AV Sbjct: 57 KKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAV 116 Query: 419 LGIFIGQAYSGVPWFEA 469 LGIF+GQA++G+PWFEA Sbjct: 117 LGIFVGQAWTGIPWFEA 133
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 147 bits (372), Expect = 1e-35 Identities = 63/77 (81%), Positives = 70/77 (90%) Frame = +2 Query: 239 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 418 KKSWIPA + ++P WLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV Sbjct: 52 KKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 111 Query: 419 LGIFIGQAYSGVPWFEA 469 LGIF+GQA+SG+PWFEA Sbjct: 112 LGIFVGQAWSGIPWFEA 128
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 85.5 bits (210), Expect = 6e-17 Identities = 39/66 (59%), Positives = 42/66 (63%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ W P P WLDGSLPGDFGFDPLGLG DP LKW +AEL+H RWAM Sbjct: 64 DRPLWFPGSTP------PEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLG 117 Query: 416 VLGIFI 433 GIFI Sbjct: 118 AAGIFI 123 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGK-DPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLG G PA +K R E+ +GR AM AV+G + Y+G Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 81.3 bits (199), Expect = 1e-15 Identities = 37/66 (56%), Positives = 42/66 (63%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ W P P WLDGSLPGDFGFDPLGL DP L+W ++AEL+H RWAM Sbjct: 64 DRPLWFPGSTP------PPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLG 117 Query: 416 VLGIFI 433 GIFI Sbjct: 118 AAGIFI 123 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGK-DPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLG G PA +K R E+ +GR AM AV+G + Y+G Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 76.3 bits (186), Expect = 4e-14 Identities = 37/61 (60%), Positives = 45/61 (73%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 466 PS+LDGS PGDFGFD LGLG+ PA L+ Y+E+ELIH RWAM AV GI + +A W + Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVK 115 Query: 467 A 469 A Sbjct: 116 A 116 Score = 36.6 bits (83), Expect = 0.033 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +2 Query: 326 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ-AYSG 451 FDPLG KDPA + + E+ +GR A+ A++G + Q AY G Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLG 215
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 73.9 bits (180), Expect = 2e-13 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 6/83 (7%) Frame = +2 Query: 239 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 418 K W+P S P +L GSL GD GFDPLGL +DP LKW+ +AEL++GRWAM V Sbjct: 54 KGEWLPGLAS------PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV 107 Query: 419 LGIFIGQAYSGV------PWFEA 469 G+ + + ++ + W++A Sbjct: 108 AGMLLPEVFTKIGIINVPEWYDA 130
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 66.6 bits (161), Expect = 3e-11 Identities = 40/106 (37%), Positives = 44/106 (41%), Gaps = 45/106 (42%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAF----------------------------------- 361 P WLDGSLPGD GFDPLGL K F Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118 Query: 362 ----------LKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFEA 469 L +RE ELIHGRWAM A LG + +A +GV W EA Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEA 164
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 66.2 bits (160), Expect = 4e-11 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 8/86 (9%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ W+ F ++ P++L G PGD+G+D GL DP K YRE E+IH RWA+ Sbjct: 43 DRAKWLGPFSTNT----PAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98 Query: 416 VLGIFIGQ---AYSGVP-----WFEA 469 LGI + Y+GV WF+A Sbjct: 99 ALGILTPELLSTYAGVKFGEPVWFKA 124 Score = 35.8 bits (81), Expect = 0.057 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG+ FDPLGL DP + E+ +GR AM + G F+ +G Sbjct: 176 LDPLYPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTG 226
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 65.9 bits (159), Expect = 5e-11 Identities = 41/135 (30%), Positives = 53/135 (39%), Gaps = 43/135 (31%) Frame = +2 Query: 194 KPVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW- 370 K ++ D+ W P I+P WLDGSL GD+GFDP GLGK +L++ Sbjct: 40 KAAPKKSAKKTVTTDRPLWYPGA------ISPDWLDGSLVGDYGFDPFGLGKPAEYLQFD 93 Query: 371 ------------------------------------------YREAELIHGRWAMAAVLG 424 +RE ELIHGRWAM A LG Sbjct: 94 IDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLG 153 Query: 425 IFIGQAYSGVPWFEA 469 + +GV W +A Sbjct: 154 ALSVEWLTGVTWQDA 168 Score = 38.5 bits (88), Expect = 0.009 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = +2 Query: 311 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 PG FDPLGL DP + AE+ H R AM A LG + A +G Sbjct: 218 PGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATG 264
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 63.2 bits (152), Expect = 3e-10 Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 ++ W+ + +A P++L G PGD+G+D GL DP K YRE ELIH RWAM Sbjct: 40 NRAKWLGPYSENA---TPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLG 96 Query: 416 VLGIFI-------GQAYSGVPWFEA 469 LG G + WF+A Sbjct: 97 ALGCQTPELLAKSGTKFGEAVWFKA 121 Score = 34.3 bits (77), Expect = 0.16 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG+ FDPLGL DP + E+ +GR A ++ G F+ +G Sbjct: 173 LDPLYPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTG 223
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 63.2 bits (152), Expect = 3e-10 Identities = 40/121 (33%), Positives = 50/121 (41%), Gaps = 43/121 (35%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW--------------- 370 D+ W P KS P +LDGSL GD+GFDP GLGK +L++ Sbjct: 51 DRPLWFPGAKS------PEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYG 104 Query: 371 ----------------------------YREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 466 +RE ELIHGRWAM A LG + +GV W + Sbjct: 105 EVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQD 164 Query: 467 A 469 A Sbjct: 165 A 165 Score = 37.4 bits (85), Expect = 0.019 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = +2 Query: 311 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 PG FDPLGL DP + AE+ H R AM LG + A +G Sbjct: 215 PGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATG 261
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 60.5 bits (145), Expect = 2e-09 Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 8/69 (11%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ---AYSGVP 457 P +L G PGD+G+D GL DP YRE ELIH RWA+ LGI + Y+GV Sbjct: 51 PEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQ 110 Query: 458 -----WFEA 469 WF+A Sbjct: 111 FGEPVWFKA 119 Score = 35.4 bits (80), Expect = 0.074 Identities = 21/52 (40%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG FDPLGL DP + E+ +GR AM + LG F+ +G Sbjct: 173 LDTLYPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTG 223
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 60.5 bits (145), Expect = 2e-09 Identities = 38/134 (28%), Positives = 50/134 (37%), Gaps = 43/134 (32%) Frame = +2 Query: 197 PVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW-- 370 P ++ D+ W P P WLDGS+ GD GFDP GLGK +L++ Sbjct: 42 PPPKKSRQVQDDGDRLVWFPGANP------PEWLDGSMIGDRGFDPFGLGKPAEYLQYDF 95 Query: 371 -----------------------------------------YREAELIHGRWAMAAVLGI 427 +RE ELIHGRWAM LG Sbjct: 96 DGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGA 155 Query: 428 FIGQAYSGVPWFEA 469 +A +G+ W +A Sbjct: 156 IAVEALTGIAWQDA 169 Score = 37.4 bits (85), Expect = 0.019 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +2 Query: 311 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 PG + FDPLGL DP L + AE+ H R AM A L + A++G Sbjct: 219 PGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTG 264
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 59.3 bits (142), Expect = 5e-09 Identities = 29/69 (42%), Positives = 40/69 (57%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D++ ++P D I P +L+G + GD+G+DP GLGK P Y+ ELIH RWAM Sbjct: 66 DRRIFLPDGLLDRSEI-PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLG 124 Query: 416 VLGIFIGQA 442 G I +A Sbjct: 125 AAGFIIPEA 133 Score = 38.5 bits (88), Expect = 0.009 Identities = 22/40 (55%), Positives = 26/40 (65%) Frame = +2 Query: 326 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAY 445 FDPLGL KDP + E+ +GR AM A+LG FI QAY Sbjct: 206 FDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFI-QAY 244
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 58.5 bits (140), Expect = 8e-09 Identities = 29/61 (47%), Positives = 35/61 (57%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 466 PSWL+G GD GFDP GL DP + R AE+ HGR AM AV+G + W+E Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGKGIWYE 71 Query: 467 A 469 A Sbjct: 72 A 72 Score = 52.8 bits (125), Expect = 4e-07 Identities = 26/61 (42%), Positives = 31/61 (50%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 466 P+ L G P D GFDPL L DP R AE+ HGR AM +G + + WFE Sbjct: 197 PALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGKGAWFE 256 Query: 467 A 469 A Sbjct: 257 A 257 Score = 49.7 bits (117), Expect = 4e-06 Identities = 24/77 (31%), Positives = 38/77 (49%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 +++ W P + P +L G GD GFDP GL DP + + AE+ H R +M A Sbjct: 370 ERELWFP------NIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLA 423 Query: 416 VLGIFIGQAYSGVPWFE 466 ++G + + WF+ Sbjct: 424 LVGCLVPELLGNGAWFQ 440 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +2 Query: 323 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 424 GFDPL L D + +EAE+ +GR A+ A+LG Sbjct: 111 GFDPLNLTTD-----YTKEAEIKNGRLALTALLG 139
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 58.5 bits (140), Expect = 8e-09 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IHGRWAM LG + A +GV Sbjct: 64 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVK 123 Query: 458 WFEA 469 + EA Sbjct: 124 FGEA 127 Score = 32.3 bits (72), Expect = 0.63 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL D + E+ +GR AM ++ G F+ +G Sbjct: 182 EVVDPLYPGGS------FDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 57.4 bits (137), Expect = 2e-08 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ ++ F +A PS+L G PGD+G+D GL DP RE E+IH RWAM Sbjct: 52 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 107 Query: 416 VLGIFIGQ--AYSGVPWFEA 469 LG + A +GV + EA Sbjct: 108 ALGCVFPELLARNGVKFGEA 127 Score = 36.2 bits (82), Expect = 0.043 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + EL +GR AM ++ G F+ +G Sbjct: 182 EIVDPLYPGGS------FDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTG 234
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 8/69 (11%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGI--------FIGQA 442 PS+L+G PGD+G+D GL DP R E+IHGRWAM LG ++G Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVE 126 Query: 443 YSGVPWFEA 469 + WF+A Sbjct: 127 FKEPVWFKA 135 Score = 36.6 bits (83), Expect = 0.033 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +2 Query: 311 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 192 PGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 57.0 bits (136), Expect = 2e-08 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 2/94 (2%) Frame = +2 Query: 194 KPVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 KP T + D+ ++ F ++ PS+L G PGD+G+D GL DP Sbjct: 41 KPKTVQSSSPWYGPDRVKYLGPFSGES----PSYLTGEFPGDYGWDTAGLSADPETFAKN 96 Query: 374 REAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 469 RE E+IH RWAM LG + A +GV + EA Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130 Score = 35.4 bits (80), Expect = 0.074 Identities = 20/59 (33%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 185 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 56.6 bits (135), Expect = 3e-08 Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQA 442 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG G Sbjct: 69 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 128 Query: 443 YSGVPWFEA 469 + WF+A Sbjct: 129 FGEAVWFKA 137 Score = 36.2 bits (82), Expect = 0.043 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 187 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 239
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 56.6 bits (135), Expect = 3e-08 Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 7/79 (8%) Frame = +2 Query: 254 PAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI 433 P F PS+L G PGD+G+D GL DP RE E+IH RWAM LG Sbjct: 54 PKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 113 Query: 434 -------GQAYSGVPWFEA 469 G + WF+A Sbjct: 114 PELLSKNGVQFGEAVWFKA 132 Score = 35.8 bits (81), Expect = 0.057 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 184 LDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 56.6 bits (135), Expect = 3e-08 Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQA 442 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG G Sbjct: 68 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 127 Query: 443 YSGVPWFEA 469 + WF+A Sbjct: 128 FGEAVWFKA 136 Score = 36.2 bits (82), Expect = 0.043 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 186 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 238
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 56.2 bits (134), Expect = 4e-08 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ ++ F +A PS+L G PGD+G+D GL DP RE E+IH RWAM Sbjct: 54 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 109 Query: 416 VLGIFIGQ--AYSGVPWFEA 469 LG + A +GV + EA Sbjct: 110 ALGCVFPELFARNGVKFGEA 129 Score = 35.8 bits (81), Expect = 0.057 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E I+P + GS FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 184 EVIDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 56.2 bits (134), Expect = 4e-08 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 46 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 105 Query: 446 SGVPWFEA 469 WF+A Sbjct: 106 GEASWFKA 113 Score = 32.0 bits (71), Expect = 0.82 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPL L DP + E+ +GR AM ++ G F+ +G Sbjct: 166 DPIYPGG-SFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 215
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 56.2 bits (134), Expect = 4e-08 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ ++ F +A PS+L G PGD+G+D GL DP RE E+IH RWAM Sbjct: 55 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 110 Query: 416 VLGIFIGQ--AYSGVPWFEA 469 LG + A +GV + EA Sbjct: 111 ALGCVFPELLARNGVKFGEA 130 Score = 34.3 bits (77), Expect = 0.16 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 188 DPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 56.2 bits (134), Expect = 4e-08 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ ++ F +A PS+L G PGD+G+D GL DP RE E+IH RWAM Sbjct: 55 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 110 Query: 416 VLGIFIGQ--AYSGVPWFEA 469 LG + A +GV + EA Sbjct: 111 ALGCVFPELFARNGVKFGEA 130 Score = 34.7 bits (78), Expect = 0.13 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 +D PG FDPLGL +DP + E +GR AM ++ G FI +G Sbjct: 187 VDPLYPGG-SFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTG 237
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 56.2 bits (134), Expect = 4e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125 Query: 458 WFEA 469 + EA Sbjct: 126 FGEA 129 Score = 34.7 bits (78), Expect = 0.13 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +2 Query: 326 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 237
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 56.2 bits (134), Expect = 4e-08 Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQA 442 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG G Sbjct: 28 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 87 Query: 443 YSGVPWFEA 469 + WF+A Sbjct: 88 FGEAVWFKA 96 Score = 33.5 bits (75), Expect = 0.28 Identities = 20/59 (33%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL + P + EL +GR AM ++ G F+ +G Sbjct: 146 EVVDPLYPGGS------FDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTG 198
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 56.2 bits (134), Expect = 4e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125 Query: 458 WFEA 469 + EA Sbjct: 126 FGEA 129 Score = 34.7 bits (78), Expect = 0.13 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +2 Query: 326 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 237
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 55.8 bits (133), Expect = 5e-08 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 62 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 121 Query: 461 FEA 469 EA Sbjct: 122 GEA 124 Score = 35.4 bits (80), Expect = 0.074 Identities = 20/59 (33%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 179 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 231
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 55.8 bits (133), Expect = 5e-08 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 125 Query: 461 FEA 469 EA Sbjct: 126 GEA 128 Score = 34.7 bits (78), Expect = 0.13 Identities = 20/59 (33%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + G+ FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 183 EVVDPLYPGGT------FDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTG 235
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 55.8 bits (133), Expect = 5e-08 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 66 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKF 125 Query: 461 FEA 469 EA Sbjct: 126 GEA 128 Score = 35.0 bits (79), Expect = 0.097 Identities = 20/51 (39%), Positives = 26/51 (50%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 186 DPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 55.8 bits (133), Expect = 5e-08 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 125 Query: 461 FEA 469 EA Sbjct: 126 GEA 128 Score = 34.7 bits (78), Expect = 0.13 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 +D PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 185 VDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 55.8 bits (133), Expect = 5e-08 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 63 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 122 Query: 446 SGVPWFEA 469 WF+A Sbjct: 123 GEAVWFKA 130 Score = 36.2 bits (82), Expect = 0.043 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 180 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 232
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 55.8 bits (133), Expect = 5e-08 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 56 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 115 Query: 446 SGVPWFEA 469 WF+A Sbjct: 116 GEAVWFKA 123 Score = 35.0 bits (79), Expect = 0.097 Identities = 20/51 (39%), Positives = 26/51 (50%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 176 DPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 225
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 55.8 bits (133), Expect = 5e-08 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 138 Query: 461 FEA 469 EA Sbjct: 139 GEA 141 Score = 33.5 bits (75), Expect = 0.28 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 199 DPIYPGG-NFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTG 248
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 55.8 bits (133), Expect = 5e-08 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 138 Query: 461 FEA 469 EA Sbjct: 139 GEA 141 Score = 33.9 bits (76), Expect = 0.22 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 199 DPIYPGG-NFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 248
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 55.8 bits (133), Expect = 5e-08 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 123 Query: 446 SGVPWFEA 469 WF+A Sbjct: 124 GEAVWFKA 131 Score = 35.0 bits (79), Expect = 0.097 Identities = 20/51 (39%), Positives = 26/51 (50%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 184 DPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 233
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 55.8 bits (133), Expect = 5e-08 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 123 Query: 446 SGVPWFEA 469 WF+A Sbjct: 124 GEAVWFKA 131 Score = 36.2 bits (82), Expect = 0.043 Identities = 21/52 (40%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 183 LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTG 233
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 55.5 bits (132), Expect = 7e-08 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKF 125 Query: 446 SGVPWFEA 469 WF+A Sbjct: 126 GEAVWFKA 133 Score = 36.2 bits (82), Expect = 0.043 Identities = 21/52 (40%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 185 LDPLYPGG-AFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 55.5 bits (132), Expect = 7e-08 Identities = 31/74 (41%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +2 Query: 254 PAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI 433 P F PS+L+G GD+G+D GL DP RE E+IH RWAM LG Sbjct: 58 PKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLT 117 Query: 434 GQ--AYSGVPWFEA 469 + A SGV + EA Sbjct: 118 PELLAKSGVKFGEA 131 Score = 33.9 bits (76), Expect = 0.22 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 189 DPIYPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 55.1 bits (131), Expect = 9e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 65 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 124 Query: 458 WFEA 469 + EA Sbjct: 125 FGEA 128 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 183 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 55.1 bits (131), Expect = 9e-08 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTF 125 Query: 446 SGVPWFEA 469 WF+A Sbjct: 126 GEAVWFKA 133 Score = 35.8 bits (81), Expect = 0.057 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 185 LDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 55.1 bits (131), Expect = 9e-08 Identities = 24/46 (52%), Positives = 29/46 (63%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 424 PS+L+G PGD+G+D GL DP R E+IHGRWAM LG Sbjct: 64 PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALG 109 Score = 36.6 bits (83), Expect = 0.033 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +2 Query: 311 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 189 PGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 55.1 bits (131), Expect = 9e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 65 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 124 Query: 458 WFEA 469 + EA Sbjct: 125 FGEA 128 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 183 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 55.1 bits (131), Expect = 9e-08 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 38 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTF 97 Query: 446 SGVPWFEA 469 WF+A Sbjct: 98 GEAVWFKA 105 Score = 35.8 bits (81), Expect = 0.057 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 157 LDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 207
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 55.1 bits (131), Expect = 9e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126 Query: 458 WFEA 469 + EA Sbjct: 127 FGEA 130 Score = 35.4 bits (80), Expect = 0.074 Identities = 20/59 (33%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 185 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 55.1 bits (131), Expect = 9e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126 Query: 458 WFEA 469 + EA Sbjct: 127 FGEA 130 Score = 34.3 bits (77), Expect = 0.16 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + + +GR AM ++ G F+ +G Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTG 237
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 55.1 bits (131), Expect = 9e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 125 Query: 458 WFEA 469 + EA Sbjct: 126 FGEA 129 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 184 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTG 236
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 55.1 bits (131), Expect = 9e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126 Query: 458 WFEA 469 + EA Sbjct: 127 FGEA 130 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 55.1 bits (131), Expect = 9e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126 Query: 458 WFEA 469 + EA Sbjct: 127 FGEA 130 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 55.1 bits (131), Expect = 9e-08 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +2 Query: 284 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP 457 +PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 125 Query: 458 WFEA 469 + EA Sbjct: 126 FGEA 129 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 184 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 55.1 bits (131), Expect = 9e-08 Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ ++ F +A PS+L G PGD+G+D GL DPA R+ E+IH RW M Sbjct: 54 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLG 109 Query: 416 VLGIFIGQ--AYSGVPWFEA 469 LG + A +GV + EA Sbjct: 110 ALGCVFPELFARNGVKFGEA 129 Score = 35.0 bits (79), Expect = 0.097 Identities = 21/59 (35%), Positives = 29/59 (49%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E I+P + GS FDPLGL DP E+ +GR AM ++ G F+ +G Sbjct: 184 EVIDPLYPGGS------FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTG 236
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKF 125 Query: 446 SGVPWFEA 469 WF+A Sbjct: 126 GEAVWFKA 133 Score = 35.8 bits (81), Expect = 0.057 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 185 LDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKF 125 Query: 446 SGVPWFEA 469 WF+A Sbjct: 126 GEAVWFKA 133 Score = 35.8 bits (81), Expect = 0.057 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 185 LDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 54.7 bits (130), Expect = 1e-07 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125 Query: 461 FEA 469 EA Sbjct: 126 GEA 128 Score = 35.4 bits (80), Expect = 0.074 Identities = 21/59 (35%), Positives = 29/59 (49%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL DP + EL GR AM ++ G F+ +G Sbjct: 183 EVVDPLYPGGS------FDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTG 235
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKF 125 Query: 446 SGVPWFEA 469 WF+A Sbjct: 126 GEAVWFKA 133 Score = 35.4 bits (80), Expect = 0.074 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 185 LDPIYPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 54.7 bits (130), Expect = 1e-07 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126 Query: 461 FEA 469 EA Sbjct: 127 GEA 129 Score = 33.5 bits (75), Expect = 0.28 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL + P + E+ +GR AM ++ G F+ +G Sbjct: 184 EIVDPLYPGGS------FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 54.7 bits (130), Expect = 1e-07 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125 Query: 461 FEA 469 EA Sbjct: 126 GEA 128 Score = 33.9 bits (76), Expect = 0.22 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +2 Query: 326 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 195 FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 54.7 bits (130), Expect = 1e-07 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKF 124 Query: 461 FEA 469 EA Sbjct: 125 GEA 127
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 54.3 bits (129), Expect = 2e-07 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPW 460 PS+L G PGD+G+D GL DP RE E+IH RWAM LG + A +GV + Sbjct: 75 PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 134 Query: 461 FEA 469 EA Sbjct: 135 GEA 137 Score = 35.0 bits (79), Expect = 0.097 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 195 DPIYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 244
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 53.5 bits (127), Expect = 3e-07 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ ++ F +A PS+L G P D+G+D GL DP RE E+IH RWAM Sbjct: 55 DRVKYLGPFSGEA----PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 110 Query: 416 VLGIFIGQ--AYSGVPWFEA 469 LG + A +G+ + EA Sbjct: 111 ALGCVFPELFARNGIKFGEA 130 Score = 36.6 bits (83), Expect = 0.033 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E I+P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 185 EVIDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 53.5 bits (127), Expect = 3e-07 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIF-------IGQAY 445 PS+L G PGD+G+D GL P RE E+IH R AM+A LG +GQ + Sbjct: 70 PSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGF 129 Query: 446 SGVPWFEA 469 WF+A Sbjct: 130 GEAVWFKA 137 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI 433 D PG F D LGL +D + EL +GR AM ++ G F+ Sbjct: 190 DPLYPGSF--DSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFV 232
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 53.5 bits (127), Expect = 3e-07 Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D GL DP RE E+IH WAM LG G + Sbjct: 7 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKF 66 Query: 446 SGVPWFEA 469 WF+A Sbjct: 67 GEAVWFKA 74 Score = 35.0 bits (79), Expect = 0.097 Identities = 20/51 (39%), Positives = 26/51 (50%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL DP + EL +GR AM ++ G F+ +G Sbjct: 127 DPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 176
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 53.1 bits (126), Expect = 3e-07 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ ++ F +A PS+L G PGD+G+D L DP RE E+IH RWAM Sbjct: 55 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLG 110 Query: 416 VLGIFIGQ--AYSGVPWFEA 469 LG + A +GV + EA Sbjct: 111 ALGCVFPELLARNGVKFGEA 130 Score = 35.4 bits (80), Expect = 0.074 Identities = 20/59 (33%), Positives = 30/59 (50%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 185 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 52.8 bits (125), Expect = 4e-07 Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP- 457 PS+L G PGD+G+D GL DP RE E+IH RWA+A LG + A +GV Sbjct: 65 PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKF 124 Query: 458 ----WFEA 469 WF+A Sbjct: 125 GEGVWFKA 132 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/59 (37%), Positives = 32/59 (54%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P +L GS FDPLGLG DP + E+ +GR AM ++ G F+ +G Sbjct: 182 EVVDPLYLGGS------FDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 7/68 (10%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 445 PS+L G PGD+G+D + DP RE E+IH RWAM LG G + Sbjct: 67 PSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKF 126 Query: 446 SGVPWFEA 469 WF+A Sbjct: 127 GEAVWFKA 134 Score = 37.4 bits (85), Expect = 0.019 Identities = 21/52 (40%), Positives = 28/52 (53%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD LPG FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 186 LDPLLPGG-AFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 51.2 bits (121), Expect = 1e-06 Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLG-KDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPW 460 +G PGD GFDPLGL DP + +E EL HGR AM A G +A SG W Sbjct: 145 EGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSGDTW 199 Score = 33.5 bits (75), Expect = 0.28 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = +2 Query: 326 FDPLGL--GKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAY 445 FDP G GKD + REAE HGR AM A LG + + + Sbjct: 46 FDPAGFLKGKDKLEVYRLREAETTHGRVAMLASLGFVVQEKF 87
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 50.1 bits (118), Expect = 3e-06 Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 6/51 (11%) Frame = +2 Query: 290 SWLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLG 424 S+LDG LPGDFGFDPLGL DP F+ KW E+I+GR+AM G Sbjct: 64 SYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAG 113 Score = 43.1 bits (100), Expect = 4e-04 Identities = 23/52 (44%), Positives = 31/52 (59%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGV 454 D + PG F+PLG GKD +K + E+ +GR AM A+LG FI +GV Sbjct: 197 DPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGV 248
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 49.3 bits (116), Expect = 5e-06 Identities = 23/53 (43%), Positives = 29/53 (54%) Frame = +2 Query: 269 DAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGI 427 D + +P G PGD+G+D GL DP K YRE ELIH R + LG+ Sbjct: 67 DLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGM 119 Score = 38.5 bits (88), Expect = 0.009 Identities = 22/52 (42%), Positives = 28/52 (53%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PG+ FDPLGL DP + E+ +GR AM A LG F+ +G Sbjct: 194 LDPLYPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTG 244
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 48.5 bits (114), Expect = 8e-06 Identities = 22/60 (36%), Positives = 31/60 (51%) Frame = +2 Query: 287 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 466 P+ L G P D GFDPL + DP R +E+ H R +M A++G + + WFE Sbjct: 169 PAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGKGAWFE 228
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 37.7 bits (86), Expect = 0.015 Identities = 21/52 (40%), Positives = 28/52 (53%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 LD PGD FDPLGL DP + E+ +GR AM ++ G F+ +G Sbjct: 70 LDPLYPGD-AFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTG 120
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 36.6 bits (83), Expect = 0.033 Identities = 21/51 (41%), Positives = 27/51 (52%) Frame = +2 Query: 299 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 D PG FDPLGL DP L + EL +GR AM ++ G F+ +G Sbjct: 177 DPIYPGG-SFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTG 226 Score = 36.6 bits (83), Expect = 0.033 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = +2 Query: 236 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 415 D+ ++ F +A PS+L G G L DP RE E+IH RWAM Sbjct: 52 DRVKYLGPFSGEA----PSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLG 99 Query: 416 VLGIFIGQ--AYSGVPWFEA 469 LG + A +GV + EA Sbjct: 100 ALGCVFPELLARNGVKFGEA 119
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 34 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 86
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 183 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 36.2 bits (82), Expect = 0.043 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 275 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 E ++P + GS FDPLGL +DP + E+ +GR AM ++ G F+ +G Sbjct: 183 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 34.7 bits (78), Expect = 0.13 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +2 Query: 326 FDPLGLGKDPAF--LKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWF 463 +DPL L ++ +RE+E+ HGR AM A LG +G+ P F Sbjct: 74 WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQLEDFPAF 121 Score = 33.1 bits (74), Expect = 0.37 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = +2 Query: 314 GDFGFDPLGLG-KDPAFLKWYREAELIHGRWAMAAVLGIFIGQ-AYSGVPWFE 466 G+ FDPLGL +DP L+ + EL +GR AM A+ G + + A GV F+ Sbjct: 181 GNLYFDPLGLKPEDPEELRELQTKELNNGRLAMIAIAGFVLQEVAEPGVEIFQ 233
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 34.3 bits (77), Expect = 0.16 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 11/58 (18%) Frame = +2 Query: 311 PGDFG-----------FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 451 PG FG FDPLGL DP + E+ +GR AM+ +LG + +G Sbjct: 35 PGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTG 92
>POLN_HEVMY (Q04610) Non-structural polyprotein (EC 2.7.7.48) (RNA-directed RNA| polymerase/Helicase) Length = 1693 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -2 Query: 424 AQHRGHRPAPVDQLGLPVPLEERRVLAKPQGVEA 323 A+ GHRP PV + P P E+ +L PQG+ A Sbjct: 1246 AEELGHRPVPVAAVLPPCPELEQGLLYLPQGLTA 1279
>NU3M_BRARE (Q9MIY3) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 388 W+P SD E ++P + GFDPLG + P L+++ A L Sbjct: 24 WLPQMNSDTEKLSPY--------ECGFDPLGSARLPFSLRFFLVAVL 62
>PNKP_HUMAN (Q96T60) Bifunctional polynucleotide phosphatase/kinase| (Polynucleotide kinase-3'-phosphatase) (DNA 5'-kinase/3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase ( Length = 521 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = -2 Query: 388 QLGLPVPLEERRVLAKPQGVEAEVTGERAIEPGRVDELGIAFERGDPRLLVGG 230 Q+ L E R V K GV TG + ++PG LG+ GD LV G Sbjct: 50 QVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGV----GDTLYLVNG 98
>NU3M_CYPCA (P24974) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 388 W+P DAE ++P + GFDPLG + P L+++ A L Sbjct: 24 WLPQMNPDAEKLSPY--------ECGFDPLGSARLPFSLRFFLVAIL 62
>NU3M_CARAU (O78686) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 388 W+P DAE ++P + GFDPLG + P L+++ A L Sbjct: 24 WLPQMNPDAEKLSPY--------ECGFDPLGSARLPFSLRFFLVAIL 62
>NU3M_ONCTS (P25707) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCNE (P20688) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCMY (P11629) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCMA (Q37108) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCKI (P20687) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCKE (Q35262) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCGO (P20686) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>AROC_TOXGO (O02607) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 536 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = +2 Query: 296 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGV 454 + G + G PLGLG +P F K EAEL ++ A G IGQ ++ V Sbjct: 263 IGGCISGAIVRPPLGLG-EPCFDKV--EAELAKAMMSLPATKGFEIGQGFASV 312
>RAGE_HUMAN (Q15109) Advanced glycosylation end product-specific receptor| precursor (Receptor for advanced glycosylation end products) Length = 404 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Frame = -2 Query: 421 QHRGHRPAPVD-QLGLPVPLEERRVLAKPQG 332 +HR R AP+ ++ PVPLEE +++ +P+G Sbjct: 216 RHRALRTAPIQPRVWEPVPLEEVQLVVEPEG 246
>NU3M_SCYCA (O79408) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P+ K D E ++P + GFDPLG + P ++++ Sbjct: 24 WLPSLKPDNEKLSPY--------ECGFDPLGSARLPFSMRFF 57
>NU3M_SALTR (O03252) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQITPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_SALSA (Q35929) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 373 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQMTPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_CROLA (P34192) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 248 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 388 W+P DAE ++P + GFDPLG + P ++++ A L Sbjct: 24 WLPQMNPDAEKLSPY--------ECGFDPLGSARLPFSIRFFLVAIL 62
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +2 Query: 296 LDGSLPGDF--GFDPLGLGKDPAFLKWY---REAELIHGRWAMAAVLGIFIGQAYSGVPW 460 ++GS PGDF G +P D + R EL +GR A +LG+ + + S P+ Sbjct: 139 VEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPY 198 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,894,277 Number of Sequences: 219361 Number of extensions: 691744 Number of successful extensions: 2529 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 2415 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2525 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
