ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet45g05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 Length = 833 Score = 369 bits (186), Expect = 5e-99 Identities = 191/193 (98%) Strand = Plus / Plus Query: 230 gcgcagtagcaagccatggccaacgcaatgttgctccctgtcctcatctccttcctcgtc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16 gcgcagtagcaagccatggccaacgcaatgttgctccctgtcctcatctccttcctcgtc 75 Query: 290 ctgcccttctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 ctgcccttctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagc 135 Query: 350 gacacgccggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccac 409 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 136 gacacgccggcggggtacccgtgcaagaccggcgtcggcgcgggggacttctactaccac 195 Query: 410 ggcctcgccgccg 422 || |||||||||| Sbjct: 196 ggtctcgccgccg 208
>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose pyrophosphatase (sagppase gene) Length = 639 Score = 339 bits (171), Expect = 4e-90 Identities = 176/178 (98%) Strand = Plus / Plus Query: 245 atggccaacgcaatgttgctccctgtcctcatctccttcctcgtcctgcccttctccgcc 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atggccaacgcaatgttgctccctgtcctcgtctccttcctcgtcctgcccttctccgcc 60 Query: 305 atggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgccggcgggg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgccggcgggg 120 Query: 365 tacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgccgccg 422 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 121 tacccgtgcaagaccggcgtcggcgcgggggacttctactaccacggcctcgccgccg 178
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117647 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 117588 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117587 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 117528 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117527 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 117480 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 118398 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 118362
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118731 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 118672 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118671 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 118612 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118611 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 118564 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96425 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 96484 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96485 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 96544 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96545 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 96592 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 119482 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 119446 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 95674 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 95710
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118731 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 118672 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118671 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 118612 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118611 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 118564 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96425 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 96484 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96485 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 96544 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96545 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 96592 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 119482 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 119446 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 95674 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 95710
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118680 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 118621 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118620 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 118561 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118560 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 118513 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96370 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 96429 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96430 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 96489 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96490 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 96537 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 119431 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 119395 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 95619 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 95655
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509003 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 31509062 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509063 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 31509122 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509123 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 31509170 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513099 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 11513040 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513039 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 11512980 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11512979 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 11512932 Score = 309 bits (156), Expect = 4e-81 Identities = 165/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320547 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 27320488 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320487 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 27320428 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 27320427 ccctgaaaacccaaggtttcctccacaaggttcgtccacggagggtga 27320380 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 316 ccaggacttctgcgtcgccgacct 339 |||||||||||||||||||||||| Sbjct: 27500440 ccaggacttctgcgtcgccgacct 27500417 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 316 ccaggacttctgcgtcgccgacct 339 |||||||||||||||||||||||| Sbjct: 27493120 ccaggacttctgcgtcgccgacct 27493097 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 31508252 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 31508288 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gacttctgcgtcgccgacct 339 |||||||||||||||||||| Sbjct: 27488512 gacttctgcgtcgccgacct 27488493
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83593 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 83534 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83533 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 83474 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83473 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 83426 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 84344 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 84308
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118700 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 118641 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118640 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 118581 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118580 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 118533 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96418 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 96477 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96478 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 96537 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96538 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 96585 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 119451 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 119415 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 95667 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 95703
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123466 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 123525 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123526 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 123585 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123586 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 123633 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15192 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 15251 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15252 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 15311 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15312 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 15359 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 122716 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 122752 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 14441 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 14477
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142000 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 142059 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142060 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 142119 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142120 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 142167 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 141249 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 141285
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63671 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 63612 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63611 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 63552 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63551 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 63504
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57419 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 57360 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57359 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 57300 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57299 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 57252 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 58170 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 58134
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269352 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 9269411 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269412 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 9269471 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269472 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 9269519 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228852 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 9228911 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228912 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 9228971 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228972 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 9229019 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165440 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 9165499 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165500 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 9165559 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165560 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 9165607 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057266 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 9057325 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057326 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 9057385 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057386 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 9057433 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 306 tggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggt 365 ||||||||| ||||||||||||||||| ||||||| || || ||||||||||||| || | Sbjct: 12556761 tggccctgaaccaggacttctgcgtcggcgacctggcccgcggcgacacgccggccggct 12556702 Query: 366 acccgtgcaag 376 ||||||||||| Sbjct: 12556701 acccgtgcaag 12556691 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 9268601 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 9268637 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 9228101 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 9228137 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 9164690 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 9164726 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 9056515 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 9056551
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939337 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 19939396 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939397 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 19939456 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939457 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 19939504 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276094 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 10276035 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276034 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 10275975 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275974 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 10275927 Score = 309 bits (156), Expect = 4e-81 Identities = 165/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388204 caaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggt 10388263 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388264 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 10388323 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10388324 ccccgaaaacccaaggtttcctccgcaaggttcgtccacagagggtga 10388371 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 19938586 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 19938622 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 10276845 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 10276809 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaag 41 ||||||||||||| ||||||| ||||||||| Sbjct: 10387453 gaccgatagcgaagtagtaccgtgagggaaag 10387484
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240929 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 9240870 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240869 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 9240810 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240809 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 9240762 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Minus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 22551706 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 22551647 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 22551646 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 22551587 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 22551586 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 22551527 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttag 80 |||||||||||||||||||||||||||||||||| Sbjct: 3580272 caaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 311 ctgacccaggacttctgcgtcgccgacctg 340 ||||| |||||||||||||||||| ||||| Sbjct: 22546681 ctgacgcaggacttctgcgtcgccaacctg 22546652 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 9241680 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 9241644
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599519 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 31599578 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599579 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 31599638 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599639 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 31599686 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509862 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 11509803 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509802 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 11509743 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509742 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 11509695 Score = 309 bits (156), Expect = 4e-81 Identities = 165/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411870 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 27411811 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411810 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 27411751 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 27411750 ccctgaaaacccaaggtttcctccacaaggttcgtccacggagggtga 27411703 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 316 ccaggacttctgcgtcgccgacct 339 |||||||||||||||||||||||| Sbjct: 27591763 ccaggacttctgcgtcgccgacct 27591740 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 316 ccaggacttctgcgtcgccgacct 339 |||||||||||||||||||||||| Sbjct: 27584443 ccaggacttctgcgtcgccgacct 27584420 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 31598768 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 31598804 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gacttctgcgtcgccgacct 339 |||||||||||||||||||| Sbjct: 27579835 gacttctgcgtcgccgacct 27579816
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46706 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 46647 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46646 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 46587 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46586 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 46539 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 47457 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 47421
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52142 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 52083 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52082 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 52023 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52022 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 51975 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 52893 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 52857
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 863 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 864 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 923 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 971 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 53 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 89
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 137 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 197 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 245
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 333 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 393 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 441
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 1058 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 1118 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 1166 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 248 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 284
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 202 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 262 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 310
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 273 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 333 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 381
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 929 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 989 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 1037 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 119 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 155
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 1057 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 1117 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1118 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 1165 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 247 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 283
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 679 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 739 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 787
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 1058 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 1118 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 1166 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 248 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 284
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 146 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 206 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 254
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950613 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 19950672 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950673 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 19950732 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950733 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 19950780 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282133 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 10282074 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282073 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 10282014 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282013 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 10281966 Score = 309 bits (156), Expect = 4e-81 Identities = 165/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394243 caaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggt 10394302 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394303 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 10394362 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10394363 ccccgaaaacccaaggtttcctccgcaaggttcgtccacagagggtga 10394410 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 19949862 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 19949898 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 10282884 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 10282848 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaag 41 ||||||||||||| ||||||| ||||||||| Sbjct: 10393492 gaccgatagcgaagtagtaccgtgagggaaag 10393523
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118674 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 118615 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118614 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 118555 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118554 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 118507 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96365 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 96424 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96425 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 96484 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96485 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 96532 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 119425 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 119389 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 95614 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 95650
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118866 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 118807 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118806 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 118747 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118746 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 118699 Score = 325 bits (164), Expect = 7e-86 Identities = 167/168 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96028 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 96087 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96088 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 96147 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96148 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 96195 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 119617 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 119581 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 95277 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 95313
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 378 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 319 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 259 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 211
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 228 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 169 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 109 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 61
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122472 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 122413 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122412 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 122353 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122352 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 122305 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 100265 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 100324 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100325 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 100384 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100385 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 100432 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 123221 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 123185 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 99516 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 99552
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 43690 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 43631 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43630 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 43571 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43570 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 43523 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 21427 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 21486 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21487 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 21546 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21547 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 21594 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 44442 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 44406 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 20676 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 20712
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 320 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 261 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 201 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 153 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 1071 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 1035
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122530 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 122471 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122470 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 122411 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122410 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 122363 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 100307 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 100366 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100367 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 100426 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100427 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 100474 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 123281 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 123245 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 99556 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 99592
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 6618 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 6677 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6678 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 6737 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6738 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 6785 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 5869 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 5905
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 681 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 682 tgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 741 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 789
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123247 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 123188 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123187 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 123128 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123127 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 123080 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 100984 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 101043 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101044 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 101103 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101104 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 101151 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 123998 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 123962 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 100233 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 100269
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 317 bits (160), Expect = 2e-83 Identities = 166/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1206 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggt 1265 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1266 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 1325 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 1373 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 457 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 493
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 309 bits (156), Expect = 4e-81 Identities = 165/168 (98%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20754 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 20695 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20694 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 20635 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 20634 ccctgaaaacccaaggtttcctccacaaggttcgtccacggagggtga 20587
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 309 bits (156), Expect = 4e-81 Identities = 165/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 94596 caaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggt 94655 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94656 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 94715 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 94716 ccccgaaaacccaaggtttcctccgcaaggttcgtccacagagggtga 94763 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaag 41 ||||||||||||| ||||||| ||||||||| Sbjct: 93845 gaccgatagcgaagtagtaccgtgagggaaag 93876
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 309 bits (156), Expect = 4e-81 Identities = 165/168 (98%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 28660 caaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggt 28719 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28720 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 28779 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 28780 ccccgaaaacccaaggtttcctccgcaaggttcgtccacagagggtga 28827 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaag 41 ||||||||||||| ||||||| ||||||||| Sbjct: 27909 gaccgatagcgaagtagtaccgtgagggaaag 27940
>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose pyrophosphatase Length = 642 Score = 281 bits (142), Expect = 9e-73 Identities = 171/181 (94%) Strand = Plus / Plus Query: 242 gccatggccaacgcaatgttgctccctgtcctcatctccttcctcgtcctgcccttctcc 301 |||||||||||||||||||||||||| || |||||||||||||| || ||||||||||| Sbjct: 1 gccatggccaacgcaatgttgctccccgtgctcatctccttccttatcatgcccttctcc 60 Query: 302 gccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgccggcg 361 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 61 gccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacaccggcg 120 Query: 362 gggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgccgcc 421 ||||||||||||||| |||||||| |||| | |||||||||||||||||||||||||||| Sbjct: 121 gggtacccgtgcaaggccggcgtcagcgcaggggacttctactaccacggcctcgccgcc 180 Query: 422 g 422 | Sbjct: 181 g 181
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 276 bits (139), Expect = 5e-71 Identities = 160/167 (95%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 832 aaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgagagcgggggtg 891 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 892 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 951 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 952 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 998
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 270 bits (136), Expect = 3e-69 Identities = 160/168 (95%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 1195 caaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggt 1254 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1255 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 1314 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1315 ccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtga 1362
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 270 bits (136), Expect = 3e-69 Identities = 160/168 (95%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 131802 caaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggt 131743 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 131742 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 131683 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131682 ccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtga 131635 Score = 270 bits (136), Expect = 3e-69 Identities = 160/168 (95%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 104962 caaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggt 105021 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 105022 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 105081 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105082 ccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtga 105129
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 270 bits (136), Expect = 3e-69 Identities = 160/168 (95%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 132763 caaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggt 132704 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 132703 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 132644 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 132643 ccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtga 132596 Score = 270 bits (136), Expect = 3e-69 Identities = 160/168 (95%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 105886 caaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggt 105945 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 105946 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 106005 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106006 ccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtga 106053
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 262 bits (132), Expect = 8e-67 Identities = 159/168 (94%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || || Sbjct: 126671 caaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtgt 126612 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 126611 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 126552 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 126551 ccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 126504 Score = 262 bits (132), Expect = 8e-67 Identities = 159/168 (94%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || || Sbjct: 108251 caaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtgt 108310 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 108311 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 108370 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 108371 ccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 108418 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 127410 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 127374 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 107512 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 107548
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 260 bits (131), Expect = 3e-66 Identities = 158/167 (94%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| || Sbjct: 138307 aaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggagta 138248 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138247 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 138188 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138187 cccgaaaacccaagggttcctccgcaaggttcgtccacggagggtga 138141 Score = 260 bits (131), Expect = 3e-66 Identities = 158/167 (94%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| || Sbjct: 110790 aaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggagta 110849 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 110850 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 110909 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110910 cccgaaaacccaagggttcctccgcaaggttcgtccacggagggtga 110956
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 260 bits (131), Expect = 3e-66 Identities = 158/167 (94%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||||| Sbjct: 138512 aaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgagagcaggggtg 138453 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138452 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 138393 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 138392 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 138346 Score = 260 bits (131), Expect = 3e-66 Identities = 158/167 (94%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||||| Sbjct: 110787 aaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgagagcaggggtg 110846 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 110847 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 110906 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 110907 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 110953
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 252 bits (127), Expect = 8e-64 Identities = 158/167 (94%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 149 aaaatgcatcggtaggggagcgttccgc-ttagagggaagcacccgcgcgagcgggggtg 207 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 208 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 267 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 268 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 314
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 252 bits (127), Expect = 8e-64 Identities = 157/167 (94%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||||||||||||||||||||||||||||||||| |||||| ||||| |||| || || Sbjct: 133026 aaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtg 132967 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 132966 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 132907 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 132906 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 132860 Score = 252 bits (127), Expect = 8e-64 Identities = 157/167 (94%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||||||||||||||||||||||||||||||||| |||||| ||||| |||| || || Sbjct: 104945 aaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtg 105004 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105005 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 105064 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 105065 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 105111 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 133769 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 133733 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 104202 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 104238
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 244 bits (123), Expect = 2e-61 Identities = 156/167 (93%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || || Sbjct: 138383 aaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtg 138324 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138323 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 138264 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 138263 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 138217 Score = 244 bits (123), Expect = 2e-61 Identities = 156/167 (93%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || || Sbjct: 111562 aaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtg 111621 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111622 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 111681 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 111682 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 111728 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 139132 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 139096 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 110813 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 110849
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 244 bits (123), Expect = 2e-61 Identities = 156/167 (93%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || || Sbjct: 140910 aaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtg 140851 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 140850 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 140791 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 140790 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 140744 Score = 244 bits (123), Expect = 2e-61 Identities = 156/167 (93%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || || Sbjct: 112747 aaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtg 112806 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112807 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 112866 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 112867 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 112913 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 141654 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 141618 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 112003 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 112039
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 244 bits (123), Expect = 2e-61 Identities = 126/127 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526835 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 33526894 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526895 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 33526954 Query: 167 ccccgaa 173 ||||||| Sbjct: 33526955 ccccgaa 33526961 Score = 133 bits (67), Expect = 5e-28 Identities = 129/147 (87%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 58 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcgg 117 |||||||||| ||||| |||||||||||||| ||| | |||| ||| || | ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 118 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 177 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 178 caaggtttcctccgcaaggttcgtcca 204 || |||||||||||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 134 ttgagtaacgaaaacattggtgagaatc 161 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||| |||||||||| ||||||||| |||| Sbjct: 33538589 gaccgatagcgtacaagtaccgtgagggaaaggtgaa 33538625 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||| |||||||||| ||||||||| |||| Sbjct: 33499957 gaccgatagcgtacaagtaccgtgagggaaaggtgaa 33499993 Score = 50.1 bits (25), Expect = 0.006 Identities = 74/89 (83%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||| || ||| |||| |||||| | |||||||||||| ||||| ||||| || || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 114 gcggaagcgagaatgtcggcttgagtaac 142 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 33526084 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 33526120 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 ccaggacttctgcgtcgccgacct 339 ||||||| |||||||||||||||| Sbjct: 8205762 ccaggacatctgcgtcgccgacct 8205739
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 244 bits (123), Expect = 2e-61 Identities = 126/127 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72032 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 72091 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72092 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 72151 Query: 167 ccccgaa 173 ||||||| Sbjct: 72152 ccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 134 ttgagtaacgaaaacattggtgagaatc 161 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||| |||||||||| ||||||||| |||| Sbjct: 83786 gaccgatagcgtacaagtaccgtgagggaaaggtgaa 83822 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||| |||||||||| ||||||||| |||| Sbjct: 45154 gaccgatagcgtacaagtaccgtgagggaaaggtgaa 45190 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 71281 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 71317
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 242 bits (122), Expect = 8e-61 Identities = 158/169 (93%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||||||||||||||||| ||||| ||| || || Sbjct: 139163 aaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtg 139104 Query: 108 t--acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 165 | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139103 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 139044 Query: 166 gccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 139043 gccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 138995 Score = 242 bits (122), Expect = 8e-61 Identities = 158/169 (93%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||||||||||||||||| ||||| ||| || || Sbjct: 110897 aaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtg 110956 Query: 108 t--acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 165 | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 110957 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 111016 Query: 166 gccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 111017 gccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 111065
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 238 bits (120), Expect = 1e-59 Identities = 156/168 (92%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 1200 caaaatacatcggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgt 1259 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1260 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 1319 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1320 ccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 1367 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 455 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 491
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 238 bits (120), Expect = 1e-59 Identities = 156/168 (92%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 116949 caaaatacatcggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgt 116890 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 116889 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 116830 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 116829 ccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 116782 Score = 238 bits (120), Expect = 1e-59 Identities = 156/168 (92%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 91153 caaaatacatcggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgt 91212 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 91213 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 91272 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 91273 ccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 91320
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| || Sbjct: 131578 aaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtg 131519 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131518 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 131459 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 131458 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 131412 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| || Sbjct: 105300 aaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtg 105359 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105360 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 105419 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 105420 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 105466
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 135103 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 135044 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135043 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134984 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134983 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134937 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 107527 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 107586 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107587 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 107646 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 107647 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 107693
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| || Sbjct: 130470 aaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtg 130411 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130410 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130351 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 130350 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 130304 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| || Sbjct: 104165 aaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtg 104224 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 104225 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 104284 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 104285 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 104331
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | || Sbjct: 134704 aaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtg 134645 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134644 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134585 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134584 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134538 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | || Sbjct: 107202 aaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtg 107261 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107262 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 107321 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 107322 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 107368
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 141682 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 141623 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141622 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 141563 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 141562 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 141516 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 111646 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 111705 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111706 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 111765 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 111766 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 111812
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 2721 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 2780 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2781 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 2840 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 2841 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 2887
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 134349 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 134290 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134289 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134230 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134229 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134183 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 106687 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 106746 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106747 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 106806 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 106807 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 106853
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 2966 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 3025 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3026 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 3085 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 3086 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 3132
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| || Sbjct: 135395 aaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcggtagtg 135336 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135335 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 135276 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 135275 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 135229 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| || Sbjct: 107030 aaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcggtagtg 107089 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107090 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 107149 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 107150 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 107196
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 134484 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 134425 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134424 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134365 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134364 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134318 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 106859 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 106918 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106919 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 106978 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 106979 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 107025
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 134482 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 134423 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134422 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134363 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134362 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134316 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 106856 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 106915 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106916 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 106975 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 106976 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 107022
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 134394 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 134335 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134334 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134275 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134274 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134228 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 106734 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 106793 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106794 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 106853 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 106854 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 106900
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | || Sbjct: 134983 aaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtg 134924 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134923 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134864 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134863 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134817 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | || Sbjct: 107424 aaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtg 107483 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107484 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 107543 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 107544 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 107590
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 135101 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 135042 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135041 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134982 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134981 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134935 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 107525 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 107584 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107585 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 107644 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 107645 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 107691
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| || Sbjct: 131571 aaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtg 131512 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131511 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 131452 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 131451 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 131405 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| || Sbjct: 105298 aaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtg 105357 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105358 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 105417 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 105418 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 105464
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 134832 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 134773 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134772 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134713 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134712 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134666 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 107306 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 107365 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107366 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 107425 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 107426 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 107472
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 134361 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 134302 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134301 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 134242 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134241 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 134195 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 106701 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 106760 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106761 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 106820 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 106821 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 106867
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 236 bits (119), Expect = 5e-59 Identities = 155/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 1294 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 1353 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1354 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1413 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1414 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 1460
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 234 bits (118), Expect = 2e-58 Identities = 154/166 (92%) Strand = Plus / Plus Query: 49 aaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtct 108 |||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 5095 aaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtgg 5154 Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5155 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 5214 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 5215 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 5260 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 4344 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 4380
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 234 bits (118), Expect = 2e-58 Identities = 154/166 (92%) Strand = Plus / Plus Query: 49 aaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtct 108 |||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 1205 aaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtgg 1264 Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1265 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 1324 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1325 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 1370 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 454 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 490
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 234 bits (118), Expect = 2e-58 Identities = 154/166 (92%) Strand = Plus / Minus Query: 49 aaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtct 108 |||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 150040 aaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtgg 149981 Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 149980 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 149921 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 149920 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 149875 Score = 234 bits (118), Expect = 2e-58 Identities = 154/166 (92%) Strand = Plus / Plus Query: 49 aaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtct 108 |||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 118626 aaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtgg 118685 Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 118686 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 118745 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 118746 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 118791 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 150791 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 150755 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 117875 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 117911
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 234 bits (118), Expect = 2e-58 Identities = 154/166 (92%) Strand = Plus / Plus Query: 49 aaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtct 108 |||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 1205 aaatacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtgg 1264 Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1265 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 1324 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1325 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 1370 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 454 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 490
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 228 bits (115), Expect = 1e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||| |||||||||||| ||||| ||| || || Sbjct: 133794 aaaatgcatcggtaggggagcgttccgc-ttagagggaagctcccgcgcgagcaggtgtg 133736 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 133735 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 133676 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 133675 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 133629 Score = 228 bits (115), Expect = 1e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||||||||||||||||||||| |||||||||||| ||||| ||| || || Sbjct: 106488 aaaatgcatcggtaggggagcgttccgc-ttagagggaagctcccgcgcgagcaggtgtg 106546 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106547 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 106606 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 106607 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 106653 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 134527 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 134491 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 105755 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 105791
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 228 bits (115), Expect = 1e-56 Identities = 154/167 (92%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| |||||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 135741 aaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcgagcggtggtg 135682 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135681 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 135622 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 135621 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 135575 Score = 228 bits (115), Expect = 1e-56 Identities = 154/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| |||||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 107816 aaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcgagcggtggtg 107875 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107876 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 107935 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 107936 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 107982
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 228 bits (115), Expect = 1e-56 Identities = 154/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||| |||||||||||||||||||||||||||| |||||||| | ||| ||| | ||| Sbjct: 1198 aaaaggcatcggtaggggagcgttccgccttagggggaagcacctgcgcgagcagcggta 1257 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1258 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1317 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1318 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 1364
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 228 bits (115), Expect = 1e-56 Identities = 154/167 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| |||||||||||||||||||||||| ||||||||||| | ||| ||| || || Sbjct: 89546 aaaatacatcggtaggggagcgttccgcctcagagggaagcaccggcgcgagcaggtgtg 89605 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89606 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 89665 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 89666 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 89712 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 88804 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 88840
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 |||||||||||||||||||||||||||||||||||| | ||| ||| || || || || Sbjct: 145347 catcggtaggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaa 145288 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 145287 gcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 145228 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 145227 aacctaagggttcctccgcaaggttcgtccacggagggtga 145187 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 |||||||||||||||||||||||||||||||||||| | ||| ||| || || || || Sbjct: 113115 catcggtaggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaa 113174 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 113175 gcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 113234 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 113235 aacctaagggttcctccgcaaggttcgtccacggagggtga 113275
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||||||||||| |||||||| | ||| ||| || || ||||| Sbjct: 1207 catcggtaggggagcgttccgccttagggggaagcaccagcgcgagcaggtgtggacgaa 1266 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1267 gcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1326 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1327 aacctaagggttcctccgcaaggttcgtccacggagggtga 1367 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 455 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 491
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 224 bits (113), Expect = 2e-55 Identities = 152/165 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | Sbjct: 5689 aaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagggttg 5748 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5749 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 5808 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 5809 cccgaaaacctaaggattcctccgcaaggttcgtccacggagggt 5853
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 224 bits (113), Expect = 2e-55 Identities = 152/165 (92%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | Sbjct: 5689 aaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagggttg 5748 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5749 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 5808 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 5809 cccgaaaacctaaggattcctccgcaaggttcgtccacggagggt 5853
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 222 bits (112), Expect = 7e-55 Identities = 154/168 (91%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||| |||||||||||||||||||||||| |||| |||||| | ||| ||| || || Sbjct: 87458 caaaatacatcggtaggggagcgttccgcctcagagagaagcaccggcgcgagcaggtgt 87517 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 87518 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 87577 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 87578 ccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 87625 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 86718 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 86754
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 222 bits (112), Expect = 7e-55 Identities = 154/168 (91%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||| ||||||||||||||||||||||||||| | |||||| | ||| ||| || || Sbjct: 1204 caaaatacatcggtaggggagcgttccgccttagggagaagcaccagcgtgagcaggtgt 1263 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1264 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 1323 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1324 ccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 1371 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 459 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 495
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 220 bits (111), Expect = 3e-54 Identities = 153/167 (91%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | Sbjct: 5417 aaaatgaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttg 5476 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5477 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 5536 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 5537 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 5583
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 220 bits (111), Expect = 3e-54 Identities = 153/167 (91%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | Sbjct: 22508 aaaatgaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttg 22449 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22448 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 22389 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 22388 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 22342
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 220 bits (111), Expect = 3e-54 Identities = 153/167 (91%) Strand = Plus / Minus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||| ||||||||||||||||||||||||||||||||| | ||||| ||| | ||| Sbjct: 129333 aaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtggtg 129274 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 129273 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgc 129214 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 | |||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 129213 ctcgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 129167 Score = 220 bits (111), Expect = 3e-54 Identities = 153/167 (91%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||| ||||||||||||||||||||||||||||||||| | ||||| ||| | ||| Sbjct: 103123 aaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtggtg 103182 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 103183 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgc 103242 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 | |||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 103243 ctcgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 103289
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 216 bits (109), Expect = 4e-53 Identities = 148/161 (91%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||||||||||||||||||| | || ||| | ||| ||||| Sbjct: 51481 catcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaa 51422 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 51421 gcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 51362 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 51361 aacctaagggttcctccgcaaggttcgtccacggagggtga 51321 Score = 216 bits (109), Expect = 4e-53 Identities = 148/161 (91%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||||||||||||||||||| | || ||| | ||| ||||| Sbjct: 38347 catcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaa 38406 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 38407 gcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 38466 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 38467 aacctaagggttcctccgcaaggttcgtccacggagggtga 38507
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 216 bits (109), Expect = 4e-53 Identities = 148/161 (91%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||||||||||||||||||| | || ||| | ||| ||||| Sbjct: 5275 catcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaa 5334 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5335 gcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 5394 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 5395 aacctaagggttcctccgcaaggttcgtccacggagggtga 5435
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||| ||||||||||||||||||||||||||||| ||||| | ||| ||| || || Sbjct: 1184 caaaatacatcggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgt 1243 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1244 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 1303 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| |||||| |||||||||||||||||||||||| Sbjct: 1304 ccccgaaaacctaagggttcctctgcaaggttcgtccacggagggtga 1351 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 438 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 474
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 214 bits (108), Expect = 2e-52 Identities = 147/160 (91%) Strand = Plus / Minus Query: 55 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaag 114 ||||||||||||||||||||||||||||||||| | ||||| ||| | | | |||||| Sbjct: 130663 atcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaag 130604 Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| Sbjct: 130603 cggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaa 130544 Query: 175 acccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 130543 acccaagggttcctccgcaaggttcgtccacggagggtga 130504 Score = 214 bits (108), Expect = 2e-52 Identities = 147/160 (91%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaag 114 ||||||||||||||||||||||||||||||||| | ||||| ||| | | | |||||| Sbjct: 104731 atcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaag 104790 Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| Sbjct: 104791 cggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaa 104850 Query: 175 acccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 104851 acccaagggttcctccgcaaggttcgtccacggagggtga 104890
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 212 bits (107), Expect = 7e-52 Identities = 152/167 (91%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||||||||| | || ||| | ||| Sbjct: 1203 aaaatacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtg 1262 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1263 gacgaaacggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1322 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1323 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 1369
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 208 bits (105), Expect = 1e-50 Identities = 147/161 (91%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||||||| ||| ||||||| | | | ||| || || ||||| Sbjct: 145135 catcggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaa 145194 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145195 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 145254 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 145255 aacctaagggttcctccgcaaggttcgtccacggagggtga 145295 Score = 208 bits (105), Expect = 1e-50 Identities = 147/161 (91%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||||||| ||| ||||||| | | | ||| || || ||||| Sbjct: 87716 catcggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaa 87657 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87656 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 87597 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 87596 aacctaagggttcctccgcaaggttcgtccacggagggtga 87556 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 144374 gaccgatagcgaagcagtaccgtgagggaaaggtgaa 144410 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 88477 gaccgatagcgaagcagtaccgtgagggaaaggtgaa 88441
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 208 bits (105), Expect = 1e-50 Identities = 108/109 (99%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 1060 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 155 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1061 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 1109 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 250 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 286
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 206 bits (104), Expect = 4e-50 Identities = 153/168 (91%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||| ||||||||||||||||||||||||||| | |||||| | || ||| || || Sbjct: 115011 caaaatacatcggtaggggagcgttccgccttagggagaagcatca-cgtgagcaggtgt 114953 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 114952 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 114893 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 114892 ccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 114845 Score = 206 bits (104), Expect = 4e-50 Identities = 153/168 (91%), Gaps = 1/168 (0%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 |||||| ||||||||||||||||||||||||||| | |||||| | || ||| || || Sbjct: 87109 caaaatacatcggtaggggagcgttccgccttagggagaagcatca-cgtgagcaggtgt 87167 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 87168 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatg 87227 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 87228 ccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 87275 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 115756 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 115720 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 86364 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 86400
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 206 bits (104), Expect = 4e-50 Identities = 146/160 (91%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||| |||||||||||||||||||||| ||||| |||||||| | ||| ||| | ||| Sbjct: 1213 aaaaggcatcggtaggggagcgttccgtcttagggggaagcacctgcgcgagcagtggta 1272 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1273 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1332 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacgg 207 |||||||||| |||| |||||||||||||||||||||||| Sbjct: 1333 cccgaaaacctaagggttcctccgcaaggttcgtccacgg 1372
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 204 bits (103), Expect = 2e-49 Identities = 103/103 (100%) Strand = Plus / Minus Query: 112 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489 Query: 172 aaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtga 5634446
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 204 bits (103), Expect = 2e-49 Identities = 151/167 (90%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 |||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||| Sbjct: 1194 aaaatgcatccgtaggggagcgttccgccttaaagggaagcaaccgcgccagcaagggtg 1253 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||| ||||| Sbjct: 1254 gacgaagcggaagcgaaaatgtccgcttgagtaacgcaaacattggtgagaatctaatgc 1313 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||| |||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 1314 ccccaaaaactaagggttcctccgcaaggttcgtccacggagggtga 1360
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 204 bits (103), Expect = 2e-49 Identities = 103/103 (100%) Strand = Plus / Minus Query: 112 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478 Query: 172 aaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtga 5634435
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 204 bits (103), Expect = 2e-49 Identities = 103/103 (100%) Strand = Plus / Plus Query: 112 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396 Query: 172 aaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtga 18439
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 198 bits (100), Expect = 1e-47 Identities = 152/168 (90%), Gaps = 1/168 (0%) Strand = Plus / Plus Query: 47 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 106 ||||||| |||||||||||| ||||||||||||| |||||| | ||||| ||| | | | Sbjct: 468 caaaatgaatcggtagggga-cgttccgccttagggggaaggacccgcgcgagcagtgct 526 Query: 107 ctacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 166 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 527 ggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatg 586 Query: 167 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 || ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 587 cctcgaaaacccaagggttcctccgcaaggttcgtccacggagggtga 634
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 198 bits (100), Expect = 1e-47 Identities = 145/160 (90%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaag 114 ||||||||||||||||||||||||||| |||||| ||| |||| | || |||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271 Query: 175 acccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||| ||||||||||||| ||||||||||||||||| Sbjct: 1272 acccaagggttcctccgcaaggctcgtccacggagggtga 1311
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 192 bits (97), Expect = 6e-46 Identities = 145/161 (90%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 |||||||||||||||||||||| ||| | |||||| | | | || | || || ||||| Sbjct: 5239 catcggtaggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaa 5298 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5299 gcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 5358 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 5359 aacctaagggttcctccgcaaggttcgtccacggagggtga 5399 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 11 accgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||| |||||||| ||||||||| |||| Sbjct: 4501 accgatagcgaaaaagtaccgtgagggaaaggtgaa 4536
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 192 bits (97), Expect = 6e-46 Identities = 145/161 (90%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 |||||||||||||||||||||| ||| | |||||| | | | || | || || ||||| Sbjct: 1206 catcggtaggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaa 1265 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1266 gcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1325 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1326 aacctaagggttcctccgcaaggttcgtccacggagggtga 1366 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 11 accgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||| |||||||| ||||||||| |||| Sbjct: 468 accgatagcgaaaaagtaccgtgagggaaaggtgaa 503
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 192 bits (97), Expect = 6e-46 Identities = 145/161 (90%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 |||||||||||||||||||||| ||| | |||||| | | | || | || || ||||| Sbjct: 1206 catcggtaggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaa 1265 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1266 gcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1325 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1326 aacctaagggttcctccgcaaggttcgtccacggagggtga 1366 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 11 accgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||| |||||||| ||||||||| |||| Sbjct: 468 accgatagcgaaaaagtaccgtgagggaaaggtgaa 503
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 186 bits (94), Expect = 4e-44 Identities = 103/106 (97%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 130533 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 130474 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 130473 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 130428 Score = 186 bits (94), Expect = 4e-44 Identities = 103/106 (97%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 102912 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 102971 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 102972 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 103017 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccg 74 ||||||||||||||||||||| Sbjct: 130588 catcggtaggggagcgttccg 130568 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccg 74 ||||||||||||||||||||| Sbjct: 102857 catcggtaggggagcgttccg 102877
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 186 bits (94), Expect = 4e-44 Identities = 147/164 (89%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcgggggtctac 110 |||||||||||||||||||||||| |||||||||| | ||| ||| || | || Sbjct: 138058 catcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggac 137999 Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 137998 gaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 137939 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 137938 gaaaacccaagggttcctccgcaaggttcgtccacggagggtga 137895 Score = 186 bits (94), Expect = 4e-44 Identities = 147/164 (89%), Gaps = 3/164 (1%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcgggggtctac 110 |||||||||||||||||||||||| |||||||||| | ||| ||| || | || Sbjct: 83819 catcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggac 83878 Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 83879 gaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 83938 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 83939 gaaaacccaagggttcctccgcaaggttcgtccacggagggtga 83982 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 138813 gaccgatagcgaaatagtaccgtgagggaaaggtgaa 138777 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 83064 gaccgatagcgaaatagtaccgtgagggaaaggtgaa 83100
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 186 bits (94), Expect = 4e-44 Identities = 142/158 (89%) Strand = Plus / Plus Query: 57 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcg 116 ||||||||||||||||||| ||| | |||||| | |||||||| || || |||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 177 ccaaggtttcctccgcaaggttcgtccacggagggtga 214 | |||| ||||||||||||| ||||||||||||||||| Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtga 1349
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 186 bits (94), Expect = 4e-44 Identities = 103/106 (97%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1754 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 1813 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1814 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 1859
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 186 bits (94), Expect = 4e-44 Identities = 103/106 (97%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 127180 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 127121 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 127120 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 127075 Score = 186 bits (94), Expect = 4e-44 Identities = 103/106 (97%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 96267 acgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 96326 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 96327 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 96372
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 184 bits (93), Expect = 2e-43 Identities = 147/165 (89%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| |||||||||||||||||||||| ||| | |||||| | | | || | | || Sbjct: 1195 aaaatacatcggtaggggagcgttccgctctagggagaagcatcagtgtaaacagatgtg 1254 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1255 gacgaagcggaagcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgc 1314 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 1315 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggt 1359 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 11 accgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||| |||||||| ||||||||| |||| Sbjct: 463 accgatagcgaaaaagtaccgtgagggaaaggtgaa 498
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| || ||| | |||||| |||||||| | || ||||| Sbjct: 1192 catcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaa 1251 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1311 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1312 aacctaagggttcctccgcaaggttcgtccacggagggtga 1352 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| ||| |||||||||||||||||| |||| Sbjct: 456 gaccgatagagaagaagtaccgcgagggaaaggtgaa 492
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| || ||| | |||||| |||||||| | || ||||| Sbjct: 124073 catcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaa 124014 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 124013 gcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 123954 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 123953 aacctaagggttcctccgcaaggttcgtccacggagggtga 123913 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| || ||| | |||||| |||||||| | || ||||| Sbjct: 95793 catcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaa 95852 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95853 gcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 95912 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 95913 aacctaagggttcctccgcaaggttcgtccacggagggtga 95953 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| ||| |||||||||||||||||| |||| Sbjct: 124809 gaccgatagagaagaagtaccgcgagggaaaggtgaa 124773 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| ||| |||||||||||||||||| |||| Sbjct: 95057 gaccgatagagaagaagtaccgcgagggaaaggtgaa 95093
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 180 bits (91), Expect = 2e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || ||||| Sbjct: 5360 catcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacgaa 5301 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5300 gcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 5241 Query: 174 aacccaaggtttcctccgcaaggttcgtcca 204 |||| |||| ||||||||||||||||||||| Sbjct: 5240 aacctaagggttcctccgcaaggttcgtcca 5210 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 6093 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 6057
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 178 bits (90), Expect = 1e-41 Identities = 102/106 (96%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1362 acgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 1421 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 1422 ccgaaaacccaagggttcctccgcaaggctcgtccacggagggtga 1467 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 gcatcggtaggggagcgttccgc 75 ||||||||||||||||||||||| Sbjct: 1306 gcatcggtaggggagcgttccgc 1328
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 178 bits (90), Expect = 1e-41 Identities = 144/162 (88%) Strand = Plus / Plus Query: 53 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacga 112 ||||||||||||||||||||||| || | |||||| | | | || | || || |||| Sbjct: 1189 gcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacga 1248 Query: 113 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 172 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1249 agcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 1308 Query: 173 aaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 1309 aaacccaagggttcctccgcaaggctcgtccacggagggtga 1350
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 178 bits (90), Expect = 1e-41 Identities = 102/106 (96%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1283 acgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 1342 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1343 ccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtga 1388
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 178 bits (90), Expect = 1e-41 Identities = 102/106 (96%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3052 acgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 3111 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 3112 ccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtga 3157
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 178 bits (90), Expect = 1e-41 Identities = 144/162 (88%) Strand = Plus / Plus Query: 53 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacga 112 ||||||||||||||||||||||| || | |||||| | | | || | || || |||| Sbjct: 1202 gcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacga 1261 Query: 113 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 172 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1262 agcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 1321 Query: 173 aaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 1322 aaacccaagggttcctccgcaaggctcgtccacggagggtga 1363
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 176 bits (89), Expect = 4e-41 Identities = 143/161 (88%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| || ||||| |||||| | | |||| | | || ||||| Sbjct: 1187 catcggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaa 1246 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1247 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1306 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1307 aacctaagggttcctccgcaaggttcgtccacggagggtga 1347 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| ||| |||||||||||||||||| |||| Sbjct: 456 gaccgatagtgaagaagtaccgcgagggaaaggtgaa 492
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 176 bits (89), Expect = 4e-41 Identities = 149/167 (89%), Gaps = 4/167 (2%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 107 ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| Sbjct: 657 aaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtg 716 Query: 108 tacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 167 |||||||||||||||||||||| | ||||| | ||||||||||||||||||||||| Sbjct: 717 gacgaagcggaagcgagaatgtca-cgtgagt---gcaaacattggtgagaatccaatgc 772 Query: 168 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 773 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 819
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 174 bits (88), Expect = 1e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaag 114 ||||||||||||||||||||| ||| | |||||| | |||||| || || |||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 175 acccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||| |||| ||||||| | ||||||||||| ||||||||| Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtga 1569 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| ||| ||||||||||||||||| |||| Sbjct: 602 gaccgatagtgaaatagtaccgcgagggaaaggtgaa 638
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 174 bits (88), Expect = 1e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaag 114 |||||||||||||||||| || ||||| |||||| ||| ||||||| || |||||| Sbjct: 2737 atcggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaag 2796 Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2797 cagaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 2856 Query: 175 acccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||| ||||||||||| | ||||||||||| |||||||||| Sbjct: 2857 acctaaggtttcctctggaaggttcgtccgcggagggtga 2896
>ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA Length = 938 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 98 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 157 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 158 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 217 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 218 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 277
>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA Length = 994 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 87 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 146 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 147 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 206 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 207 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 266
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Minus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 25207 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 25148 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 25147 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 25088 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 25087 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 25028 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 311 ctgacccaggacttctgcgtcgccgacctg 340 ||||| |||||||||||||||||| ||||| Sbjct: 20182 ctgacgcaggacttctgcgtcgccaacctg 20153
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Minus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 146634 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 146575 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 146574 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 146515 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 146514 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 146455 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 311 ctgacccaggacttctgcgtcgccgacctg 340 ||||| |||||||||||||||||| ||||| Sbjct: 141609 ctgacgcaggacttctgcgtcgccaacctg 141580
>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full insert sequence Length = 938 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 98 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 157 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 158 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 217 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 218 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 277
>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full insert sequence Length = 994 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 87 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 146 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 147 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 206 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 207 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 266
>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds Length = 1004 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 79 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 138 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 139 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 198 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 199 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 258
>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds Length = 1030 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 100 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 159 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 160 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 219 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 220 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 279
>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds Length = 994 Score = 172 bits (87), Expect = 6e-40 Identities = 157/180 (87%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 241 agccatggccaacgca---atgttgctccctgtcctcatctccttcctcgtcctgccctt 297 |||||||||||| ||| ||| ||||||| |||||| ||||||||||| | ||||| || Sbjct: 99 agccatggccaaggcagtgatgatgctccccgtcctcctctccttcctcctgctgccatt 158 Query: 298 ctccgccatggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgcc 357 ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 159 ctcgtccatggcgctgacgcaggatttctgcgtcgccgacctgacctgcagcgacacgcc 218 Query: 358 ggcggggtacccgtgcaagaccggcgtcggcgcggnggacttctactaccacggcctcgc 417 ||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||| Sbjct: 219 ggcggggtacccgtgcaaggccagcgtcggcgccggcgacttcgcctaccacggcctcgc 278
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 170 bits (86), Expect = 2e-39 Identities = 140/158 (88%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaag 114 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1193 atcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaag 1252 Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 1312 Query: 175 acccaaggtttcctccgcaaggttcgtccacggagggt 212 ||| |||| ||||||||||||| ||||||||||||||| Sbjct: 1313 acctaagggttcctccgcaaggctcgtccacggagggt 1350 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 453 gaccgatagcgaaatagtaccgtgagggaaaggtgaa 489
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 170 bits (86), Expect = 2e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 55 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaag 114 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114469 atcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaag 114410 Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114409 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114350 Query: 175 acccaaggtttcctccgcaaggttcgtccacggagggt 212 ||| |||| ||||||||||||| ||||||||||||||| Sbjct: 114349 acctaagggttcctccgcaaggctcgtccacggagggt 114312 Score = 170 bits (86), Expect = 2e-39 Identities = 140/158 (88%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaag 114 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87519 atcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaag 87578 Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 87579 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 87638 Query: 175 acccaaggtttcctccgcaaggttcgtccacggagggt 212 ||| |||| ||||||||||||| ||||||||||||||| Sbjct: 87639 acctaagggttcctccgcaaggctcgtccacggagggt 87676 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 115209 gaccgatagcgaaatagtaccgtgagggaaaggtgaa 115173 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 86779 gaccgatagcgaaatagtaccgtgagggaaaggtgaa 86815
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 170 bits (86), Expect = 2e-39 Identities = 101/106 (95%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3074 acgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgcc 3133 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 3134 ccgaaaacccaagggttcctccgcaaggctcgtccacggagggtga 3179
>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds Length = 642 Score = 170 bits (86), Expect = 2e-39 Identities = 139/157 (88%) Strand = Plus / Plus Query: 261 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 320 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 20 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 79 Query: 321 acttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 380 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 80 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 139 Query: 381 gcgtcggcgcggnggacttctactaccacggcctcgc 417 |||||||||| | |||||| ||||||||||||||| Sbjct: 140 gcgtcggcgccggcgacttcgcctaccacggcctcgc 176
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 168 bits (85), Expect = 9e-39 Identities = 142/161 (88%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| |||||| ||||||||| | || ||| | ||| | ||| Sbjct: 1233 catcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaa 1292 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1293 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1352 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||| ||||||||||||||||| ||||||| Sbjct: 1353 aacctaagggttccttcgcaaggttcgtccacgtagggtga 1393
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 168 bits (85), Expect = 9e-39 Identities = 142/161 (88%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| || ||||| |||||| | | |||| | | || ||||| Sbjct: 4222 catcggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaa 4281 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 || |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 4282 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaa 4341 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 4342 aacctaagggttcctccgcaaggttcgtccacggagggtga 4382
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 163 bits (82), Expect = 6e-37 Identities = 100/106 (94%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||| |||| |||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1243 acgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgcc 1302 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1303 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtga 1348
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 159 bits (80), Expect = 9e-36 Identities = 134/152 (88%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaag 114 ||||||||||||||||||||| ||||| |||||| ||| |||| || || |||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 175 acccaaggtttcctccgcaaggttcgtccacg 206 ||| |||| ||||| ||||||||||||||||| Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacg 1752
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 159 bits (80), Expect = 9e-36 Identities = 98/104 (94%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 1727 acgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgcc 1786 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 1787 ccgaaaacccaagggttcctccgcaaggctcgtccacggagggt 1830 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccg 74 ||||||||||||||||||||| Sbjct: 1672 catcggtaggggagcgttccg 1692
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1239 acgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 1298 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||| | ||||||||||| ||||||||| Sbjct: 1299 ccgaaaacctaaggattcctccactaggttcgtccatggagggtga 1344 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||||| ||||||| ||||||||| |||| Sbjct: 446 gaccgatagcgaactagtaccgtgagggaaaggtgaa 482
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1269 acgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 1328 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||| | ||||||||||| ||||||||| Sbjct: 1329 ccgaaaacctaagggttcctccactaggttcgtccatggagggtga 1374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgc 75 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 |||| |||||||| ||||||||||||||||| |||| Sbjct: 452 gaccaatagcgaaatagtaccgcgagggaaaggtgaa 488
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1433 acgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 1492 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||| | ||||||||||| ||||||||| Sbjct: 1493 ccgaaaacctaagggttcctccactaggttcgtccatggagggtga 1538 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||||| ||||||| ||||||||| |||| Sbjct: 521 gaccgatagcgaactagtaccgtgagggaaaggtgaa 557
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 26048 acgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 26107 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||| | ||||||||||| ||||||||| Sbjct: 26108 ccgaaaacctaaggattcctccactaggttcgtccatggagggtga 26153 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||||| ||||||| ||||||||| |||| Sbjct: 25255 gaccgatagcgaactagtaccgtgagggaaaggtgaa 25291
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 153 bits (77), Expect = 5e-34 Identities = 140/161 (86%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| | |||| |||||| ||||||||||| || || || Sbjct: 189183 catcggtaggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaa 189242 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 | ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 189243 acagaagcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaa 189302 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| |||||||| ||||||||||| |||||||||| Sbjct: 189303 aacctaaggattcctccggaaggttcgtccgcggagggtga 189343 Score = 153 bits (77), Expect = 5e-34 Identities = 140/161 (86%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| | |||| |||||| ||||||||||| || || || Sbjct: 150740 catcggtaggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaa 150799 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 | ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 150800 acagaagcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaa 150859 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| |||||||| ||||||||||| |||||||||| Sbjct: 150860 aacctaaggattcctccggaaggttcgtccgcggagggtga 150900
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| ||||||||||||||||| ||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtga 1373 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgcctta 79 |||||||||||||||||| |||||| Sbjct: 1204 atcggtaggggagcgttctgcctta 1228
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1327 acgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 1386 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||||||||||| Sbjct: 1387 ccgaaaacctaagggttcctccactaggttcgtcca 1422 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 526 gaccgatagcgaaatagtaccacgagggaaaggtgaa 562
>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4406 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 acgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 1331 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||||||||||| Sbjct: 1332 ccgaaaacctaagggttcctccactaggttcgtcca 1367
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151115 acgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 151056 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||||||||||| Sbjct: 151055 ccgaaaacctaagggttcctccactaggttcgtcca 151020 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43088 acgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 43147 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||||||||||| Sbjct: 43148 ccgaaaacctaagggttcctccactaggttcgtcca 43183 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 151915 gaccgatagcgaaatagtaccacgagggaaaggtgaa 151879 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 42288 gaccgatagcgaaatagtaccacgagggaaaggtgaa 42324
>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1 Length = 1964 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 acgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 1331 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||||||||||| Sbjct: 1332 ccgaaaacctaagggttcctccactaggttcgtcca 1367
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1327 acgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 1386 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||||||||||| Sbjct: 1387 ccgaaaacctaagggttcctccactaggttcgtcca 1422 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 526 gaccgatagcgaaatagtaccacgagggaaaggtgaa 562
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 acgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 1319 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||||||||||| Sbjct: 1320 ccgaaaacctaagggttcctccactaggttcgtcca 1355 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 460 gaccgatagcgaaatagtaccacgagggaaaggtgaa 496
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 149 bits (75), Expect = 9e-33 Identities = 96/103 (93%) Strand = Plus / Plus Query: 112 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 171 |||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2999 aagcagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccg 3058 Query: 172 aaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 3059 aaaacctaaggtttcctctggaaggttcgtccacggagggtga 3101
>gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA Length = 212 Score = 147 bits (74), Expect = 3e-32 Identities = 99/106 (93%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 192 acgaatcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcc 133 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||| |||| ||||||||||||||| ||||||||||||||| Sbjct: 132 tcgaaaacctaagggttcctccgcaaggtt-gtccacggagggtga 88
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 145 bits (73), Expect = 1e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 56 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagc 115 |||||||||||||||||||| | | | ||||| | || ||| |||||| ||||||| Sbjct: 1273 tcggtaggggagcgttccgctctcgggtgaagctttcacggaagtgggggtggacgaagc 1332 Query: 116 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 175 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1392 Query: 176 cccaaggtttcctccgcaaggttcgtcca 204 || |||| ||||||| | ||| ||||||| Sbjct: 1393 cctaagggttcctccactaggctcgtcca 1421 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 ||||||||||||| ||||||||||||||| Sbjct: 517 gaccgatagcgaaatagtaccgcgagggaa 546
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 145 bits (73), Expect = 1e-31 Identities = 136/157 (86%) Strand = Plus / Plus Query: 58 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcgg 117 ||||||||||||||||||| ||| |||||| | ||| |||| || || ||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 118 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 177 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327 Query: 178 caaggtttcctccgcaaggttcgtccacggagggtga 214 |||| ||||||| | ||||||||||| ||||||||| Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtga 1364 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| |||||||||||||||||||||| |||| Sbjct: 444 gaccgatagtgaacaagtaccgcgagggaaaggtgaa 480
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 112 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 171 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 172 aaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||| |||| ||||||| | ||||||||||| ||||||| Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggt 1336 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccg 74 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 145 bits (73), Expect = 1e-31 Identities = 136/157 (86%) Strand = Plus / Plus Query: 58 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcgg 117 ||||||||||||||||||| ||| |||||| | ||| |||| || || ||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 118 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 177 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209 Query: 178 caaggtttcctccgcaaggttcgtccacggagggtga 214 |||| ||||||| | ||||||||||| ||||||||| Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtga 3246 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| |||||||||||||||||||||| |||| Sbjct: 2325 gaccgatagtgaacaagtaccgcgagggaaaggtgaa 2361
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 145 bits (73), Expect = 1e-31 Identities = 139/161 (86%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| | |||| |||||| ||||||||||| || || || Sbjct: 190106 catcggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaa 190165 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 | |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 190166 acagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaa 190225 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| |||||||| ||||||||||| |||||||||| Sbjct: 190226 aacctaaggattcctccggaaggttcgtccgcggagggtga 190266 Score = 145 bits (73), Expect = 1e-31 Identities = 139/161 (86%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||||||||||||||| | |||| |||||| ||||||||||| || || || Sbjct: 151533 catcggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaa 151592 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 | |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 151593 acagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaa 151652 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| |||||||| ||||||||||| |||||||||| Sbjct: 151653 aacctaaggattcctccggaaggttcgtccgcggagggtga 151693
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 143 bits (72), Expect = 5e-31 Identities = 96/104 (92%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 860 acgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgcc 919 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||| || |||||||||||||| |||||||||| |||||||| Sbjct: 920 ccgaaaccctaaggtttcctccgccaggttcgtccccggagggt 963 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 73 gaccgatagtgaaccagtaccgcgagggaaaggtgaa 109 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccg 74 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 143 bits (72), Expect = 5e-31 Identities = 96/104 (92%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1226 acgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgcc 1285 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 ||||||||| |||| ||||| | | ||||||||||| ||||||| Sbjct: 1286 ccgaaaacctaagggttccttcactaggttcgtccatggagggt 1329 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgc 75 ||||||||||||||||||||| Sbjct: 1172 atcggtaggggagcgttccgc 1192 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 11 accgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||| ||| ||||||||||||||||| |||| Sbjct: 434 accgatagtgaagtagtaccgcgagggaaaggtgaa 469
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 139 bits (70), Expect = 8e-30 Identities = 85/90 (94%) Strand = Plus / Minus Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154933 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 154874 Query: 174 aacccaaggtttcctccgcaaggttcgtcc 203 |||| |||| |||||| |||||||||||| Sbjct: 154873 aacctaagggttcctctacaaggttcgtcc 154844 Score = 139 bits (70), Expect = 8e-30 Identities = 85/90 (94%) Strand = Plus / Plus Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78959 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 79018 Query: 174 aacccaaggtttcctccgcaaggttcgtcc 203 |||| |||| |||||| |||||||||||| Sbjct: 79019 aacctaagggttcctctacaaggttcgtcc 79048
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 139 bits (70), Expect = 8e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||| ||||||||| || |||||||||||||||||||||||| Sbjct: 137741 acgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgcc 137800 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||| ||||| ||||||| ||||||||| Sbjct: 137801 ccgaaaacctaagggttcctccacaaggctcgtccatggagggtga 137846 Score = 139 bits (70), Expect = 8e-30 Identities = 97/106 (91%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||| ||||||||| || |||||||||||||||||||||||| Sbjct: 47803 acgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgcc 47744 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||||| ||||| ||||||| ||||||||| Sbjct: 47743 ccgaaaacctaagggttcctccacaaggctcgtccatggagggtga 47698
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 137 bits (69), Expect = 3e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1424 gcgggagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1483 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||| |||| ||||| ||||||||||||| | ||||||| Sbjct: 1484 aacctaagggttcctttacaaggttcgtccatgaagggtga 1524
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 137 bits (69), Expect = 3e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 112 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 171 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 172 aaaacccaaggtttcctccgcaaggttcgtcca 204 |||||| |||| ||||||| | ||| ||||||| Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtcca 1486
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 137 bits (69), Expect = 3e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1334 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 | | |||| ||||||| | ||||||||||| ||||||||| Sbjct: 1335 agtctaagggttcctccactaggttcgtccatggagggtga 1375 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||||||||||||||||||||||| |||| Sbjct: 446 gaccgatagcgaacaagtaccgcgagggaaaggtgaa 482 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tcggtaggggagcgttccgcc 76 ||||||||||||||||||||| Sbjct: 1217 tcggtaggggagcgttccgcc 1237
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 137 bits (69), Expect = 3e-29 Identities = 84/89 (94%) Strand = Plus / Plus Query: 116 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 175 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1393 ggaagcgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1452 Query: 176 cccaaggtttcctccgcaaggttcgtcca 204 || |||| ||||||| | ||||||||||| Sbjct: 1453 cctaagggttcctccactaggttcgtcca 1481
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 137 bits (69), Expect = 3e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 |||||||||||||||||||||| |||| |||||| ||| ||||| || || || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 114 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 173 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 1215 gcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaa 1274 Query: 174 aacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| ||||| || ||||||||||| || ||||||| Sbjct: 1275 aacccaaggattcctacggaaggttcgtccgcgtagggtga 1315
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Minus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 26572 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 26513 Query: 177 ccaaggtttcctccgcaaggttcgtccacggagggt 212 | |||||||||| | |||||||||||||| ||||| Sbjct: 26512 ctaaggtttcctttggaaggttcgtccacgaagggt 26477
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1236 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1295 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1296 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1339
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1236 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1295 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1296 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1339
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1236 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1295 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1296 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1339
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1237 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1296 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||| |||| ||||| | |||||||| |||||| ||||||| Sbjct: 1297 gaaaacctaaggattccttcacaaggttcatccacgtagggtga 1340
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||| |||| |||||||||||||||||||||||||| || ||||||||||| || || Sbjct: 2982 acgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgagaatcctatacc 3041 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 ||||||||||||||||||||||| |||| |||||| |||||||| Sbjct: 3042 ccgaaaacccaaggtttcctccggaaggctcgtccgcggagggt 3085
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1533 acgaagcggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgcc 1592 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||| ||||||| Sbjct: 1593 ccgaaaacctaagggttcctccactaggctcgtcca 1628
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 116 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 175 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479 Query: 176 cccaaggtttcctccgcaaggttcgtcc 203 || |||| ||||||| | |||||||||| Sbjct: 1480 cctaagggttcctccaccaggttcgtcc 1507
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1502 acgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatccaatgcc 1561 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||| ||||||| Sbjct: 1562 ccgaaaacctaagggttcctccactaggctcgtcca 1597 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 ||||||||||||| ||||||||||||||| Sbjct: 581 gaccgatagcgaaatagtaccgcgagggaa 610 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcggtaggggagcgttccgc 75 |||||||||||||||||||| Sbjct: 1449 tcggtaggggagcgttccgc 1468
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 135 bits (68), Expect = 1e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1569538 acgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgct 1569479 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 1569478 ccgaaagcacaaggtttcctccggaaggttcgtccgcggagggt 1569435
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Minus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 39186 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 39127 Query: 177 ccaaggtttcctccgcaaggttcgtccacggagggt 212 | |||| |||||||| |||| |||||| |||||||| Sbjct: 39126 ctaaggattcctccggaaggctcgtccgcggagggt 39091 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 20214 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 20273 Query: 177 ccaaggtttcctccgcaaggttcgtccacggagggt 212 | |||| |||||||| |||| |||||| |||||||| Sbjct: 20274 ctaaggattcctccggaaggctcgtccgcggagggt 20309 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||||||||||||||||||||||| |||| Sbjct: 39976 gaccgatagcgaacaagtaccgcgagggaaaggtgaa 39940 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||||||||||||||||||||||| |||| Sbjct: 19424 gaccgatagcgaacaagtaccgcgagggaaaggtgaa 19460
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 133 bits (67), Expect = 5e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 116 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 175 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1323 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccggaaa 1382 Query: 176 cccaaggtttcctccgcaaggttcgtccacggagggtga 214 || |||| ||||||| ||||| ||||||| || |||||| Sbjct: 1383 cctaagggttcctccacaaggctcgtccatggggggtga 1421 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 acaaaatgcatcggtaggggagcgttcc 73 |||||| | ||||||||||||||||||| Sbjct: 1254 acaaaaagaatcggtaggggagcgttcc 1281
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 133 bits (67), Expect = 5e-28 Identities = 129/147 (87%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 58 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcgg 117 |||||||||| ||||| |||||||||||||| ||| | |||| ||| || | ||||||| Sbjct: 114446 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 114388 Query: 118 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 177 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 114387 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 114329 Query: 178 caaggtttcctccgcaaggttcgtcca 204 || |||||||||||||||||||||||| Sbjct: 114328 cagggtttcctccgcaaggttcgtcca 114302 Score = 50.1 bits (25), Expect = 0.006 Identities = 74/89 (83%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||| || ||| |||| |||||| | |||||||||||| ||||| ||||| || || Sbjct: 114561 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 114503 Query: 114 gcggaagcgagaatgtcggcttgagtaac 142 | ||||| |||||||| |||| ||||||| Sbjct: 114502 gtggaagtgagaatgttggctggagtaac 114474
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 133 bits (67), Expect = 5e-28 Identities = 129/147 (87%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 58 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcgg 117 |||||||||| ||||| |||||||||||||| ||| | |||| ||| || | ||||||| Sbjct: 46092 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 46034 Query: 118 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 177 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 46033 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 45975 Query: 178 caaggtttcctccgcaaggttcgtcca 204 || |||||||||||||||||||||||| Sbjct: 45974 cagggtttcctccgcaaggttcgtcca 45948 Score = 50.1 bits (25), Expect = 0.006 Identities = 74/89 (83%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaa 113 ||||||| || ||| |||| |||||| | |||||||||||| ||||| ||||| || || Sbjct: 46207 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 46149 Query: 114 gcggaagcgagaatgtcggcttgagtaac 142 | ||||| |||||||| |||| ||||||| Sbjct: 46148 gtggaagtgagaatgttggctggagtaac 46120
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 133 bits (67), Expect = 5e-28 Identities = 79/83 (95%) Strand = Plus / Plus Query: 122 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 1346 Query: 182 gtttcctccgcaaggttcgtcca 204 | ||||||| | ||||||||||| Sbjct: 1347 ggttcctccactaggttcgtcca 1369 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 477 gaccgatagcgaaatagtaccacgagggaaaggtgaa 513
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Minus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17797 gaagtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 17738 Query: 177 ccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||| |||||||| |||| |||||| |||||||||| Sbjct: 17737 ccaagggttcctccggaaggctcgtccgcggagggtga 17700 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3069 gaagtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 3128 Query: 177 ccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||| |||||||| |||| |||||| |||||||||| Sbjct: 3129 ccaagggttcctccggaaggctcgtccgcggagggtga 3166
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 119 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 178 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1715 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacct 1774 Query: 179 aaggtttcctccgcaaggttcgtcca 204 |||| ||||||| | ||| ||||||| Sbjct: 1775 aagggttcctccactaggctcgtcca 1800 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||||||||||||| |||| Sbjct: 633 gaccgatagcgaagtagtaccgcgagggaaaggtgaa 669
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1500 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1559 Query: 175 acccaaggtttcctccgcaaggttcgtcca 204 ||| |||| ||||||| | ||||||||||| Sbjct: 1560 acctaagggttcctccactaggttcgtcca 1589 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 699 gaccgatagcgaaatagtaccacgagggaaaggtgaa 735
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931 Query: 175 acccaaggtttcctccgcaaggttcgtcca 204 ||| |||| |||||| ||||||||||||| Sbjct: 1932 acctaagggttcctctacaaggttcgtcca 1961 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 ||||||||||||| ||||||||||||||| Sbjct: 766 gaccgatagcgaaatagtaccgcgagggaa 795
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1394 Query: 175 acccaaggtttcctccgcaaggttcgtcca 204 ||| |||| ||||||| | ||||||||||| Sbjct: 1395 acctaagggttcctccactaggttcgtcca 1424 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 534 gaccgatagcgaaatagtaccacgagggaaaggtgaa 570
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1314 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1373 Query: 175 acccaaggtttcctccgcaaggttcgtcca 204 ||| |||| ||||||| | ||||||||||| Sbjct: 1374 acctaagggttcctccactaggttcgtcca 1403
>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1 Length = 2749 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1500 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1559 Query: 175 acccaaggtttcctccgcaaggttcgtcca 204 ||| |||| ||||||| | ||||||||||| Sbjct: 1560 acctaagggttcctccactaggttcgtcca 1589 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 699 gaccgatagcgaaatagtaccacgagggaaaggtgaa 735
>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1 Length = 2676 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1394 Query: 175 acccaaggtttcctccgcaaggttcgtcca 204 ||| |||| ||||||| | ||||||||||| Sbjct: 1395 acctaagggttcctccactaggttcgtcca 1424 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 534 gaccgatagcgaaatagtaccacgagggaaaggtgaa 570
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 131 bits (66), Expect = 2e-27 Identities = 139/162 (85%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 51 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctac 110 |||||||||||||||||||||| || ||||| |||||| |||||| || || || Sbjct: 2870 atgcatcggtaggggagcgttctgc-ttagattgaagcattaacgaaagtggatgtggac 2928 Query: 111 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 170 |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2929 aaagcagaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgcccc 2988 Query: 171 gaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 | ||||| |||| |||||| | |||| ||||||||||||||| Sbjct: 2989 ggaaacctaaggattcctctggaaggctcgtccacggagggt 3030
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 gaagcgagaatgtaggtttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1414 Query: 177 ccaaggtttcctccgcaaggttcgtccacggagggtga 214 | |||| ||||||| | ||||||||||| || |||||| Sbjct: 1415 ctaagggttcctccactaggttcgtccatggggggtga 1452
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 129 bits (65), Expect = 8e-27 Identities = 86/93 (92%) Strand = Plus / Plus Query: 122 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 181 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1248 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1307 Query: 182 gtttcctccgcaaggttcgtccacggagggtga 214 | ||||| | |||||||| |||||| ||||||| Sbjct: 1308 gattccttcacaaggttcatccacgtagggtga 1340
>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and complete cds Length = 2490 Score = 129 bits (65), Expect = 8e-27 Identities = 124/144 (86%) Strand = Plus / Plus Query: 276 tctccttcctcgtcctgcccttctccgccatggccctgacccaggacttctgcgtcgccg 335 ||||||||||| | ||||||| || || | |||||||| ||||||||||||||||||| Sbjct: 1486 tctccttcctcctgatgcccttggcctccctagccctgacgcaggacttctgcgtcgccg 1545 Query: 336 acctgtcctgcagcgacacgccggcggggtacccgtgcaagaccggcgtcggcgcggngg 395 ||||| ||||||||||||||||||||||||||||||||||| || ||||| ||| | Sbjct: 1546 acctgacctgcagcgacacgccggcggggtacccgtgcaagtccagcgtcaccgccaacg 1605 Query: 396 acttctactaccacggcctcgccg 419 ||||||||| ||||||||| |||| Sbjct: 1606 acttctacttccacggcctggccg 1629
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 129 bits (65), Expect = 8e-27 Identities = 74/77 (96%) Strand = Plus / Plus Query: 112 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 171 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 172 aaaacccaaggtttcct 188 |||||| |||| ||||| Sbjct: 1359 aaaacctaagggttcct 1375 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 atcggtaggggagcgttccgc 75 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| ||||||| ||||||||| |||| Sbjct: 462 gaccgatagcgaaatagtaccgtgagggaaaggtgaa 498
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 127 bits (64), Expect = 3e-26 Identities = 88/96 (91%) Strand = Plus / Plus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 925 Query: 177 ccaaggtttcctccgcaaggttcgtccacggagggt 212 | |||| |||||||| |||| |||||| |||||||| Sbjct: 926 ctaagggttcctccggaaggctcgtccgcggagggt 961 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 73 gaccgatagtgaaccagtaccgcgagggaaaggtgaa 109
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 848 acgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgct 907 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||| || |||| |||||||| ||||||||||| |||||||| Sbjct: 908 ccgaaaccctaagggttcctccggaaggttcgtccgcggagggt 951
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome Length = 119704 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||| |||| |||||||||||||||||||||||||| || |||| |||||| || || Sbjct: 49120 acgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgggaatcctatacc 49061 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 ||||||||||||||||||||||| |||| |||||| |||||||| Sbjct: 49060 ccgaaaacccaaggtttcctccggaaggctcgtccgcggagggt 49017 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||| |||| |||||||||||||||||||||||||| || |||| |||||| || || Sbjct: 5239 acgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgggaatcctatacc 5298 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 ||||||||||||||||||||||| |||| |||||| |||||||| Sbjct: 5299 ccgaaaacccaaggtttcctccggaaggctcgtccgcggagggt 5342
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| |||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 2313530 acgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgcc 2313589 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||||||||||| |||| ||| ||||||||||| ||| |||| Sbjct: 2313590 ccgaaaacccaagggttcccccggaaggttcgtccgcggggggt 2313633 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| |||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 1108317 acgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgcc 1108258 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||||||||||| |||| ||| ||||||||||| ||| |||| Sbjct: 1108257 ccgaaaacccaagggttcccccggaaggttcgtccgcggggggt 1108214
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 1262 acgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgcc 1321 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 ||||||||| |||| ||||| | ||||||||||||| ||||||| Sbjct: 1322 ccgaaaacctaagggttccttcacaaggttcgtccatggagggt 1365 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 11 accgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||| ||| ||||||||||||||||| |||| Sbjct: 457 accgatagtgaagtagtaccgcgagggaaaggtgaa 492
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3518 acgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 3577 Query: 169 ccgaaaacccaaggtttcct 188 | ||||||| |||| ||||| Sbjct: 3578 ctgaaaacctaagggttcct 3597 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaag 41 ||||||||||||| ||||||||||||||||| Sbjct: 485 gaccgatagcgaaatagtaccgcgagggaaag 516
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 1659734 acgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgcc 1659793 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||| ||||||| |||||||| |||| |||||| |||||||| Sbjct: 1659794 ccgaaatcccaagggttcctccggaaggctcgtccgcggagggt 1659837 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 1049010 acgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgcc 1048951 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||| ||||||| |||||||| |||| |||||| |||||||| Sbjct: 1048950 ccgaaatcccaagggttcctccggaaggctcgtccgcggagggt 1048907 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 1658950 gaccgatagtgaaccagtaccgcgagggaaaggtgaa 1658986 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 1049794 gaccgatagtgaaccagtaccgcgagggaaaggtgaa 1049758
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 127 bits (64), Expect = 3e-26 Identities = 88/96 (91%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2113 acgaatcggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgcc 2172 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||| ||||||| Sbjct: 2173 ccgaaaacctaagggttcctccactaggctcgtcca 2208
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1370 acgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 1429 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 ||||||||| |||| |||| ||| ||| |||||| ||| |||| Sbjct: 1430 ccgaaaacctaagggttccaccggtagggtcgtccgcggtgggt 1473 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||||||||| |||||| ||||||||| |||| Sbjct: 555 gaccgatagcgaactagtaccatgagggaaaggtgaa 591
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1509 gaagcgagaatgttggtttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1568 Query: 177 ccaaggtttcctccgcaaggttcgtcca 204 | |||| |||||| ||||||||||||| Sbjct: 1569 ctaagggttcctctacaaggttcgtcca 1596 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaag 41 ||||||||||||| ||||||||||||||||| Sbjct: 676 gaccgatagcgaaatagtaccgcgagggaaag 707
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 3000 acgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgcc 3059 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 ||||||||| |||| ||||| | ||||||||||||| ||||||| Sbjct: 3060 ccgaaaacctaagggttccttcacaaggttcgtccatggagggt 3103 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 11 accgatagcgaacaagtaccgcgagggaaagatgaa 46 |||||||| ||| ||||||||||||||||| |||| Sbjct: 2195 accgatagtgaagtagtaccgcgagggaaaggtgaa 2230
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 1496 acgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgcc 1555 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||| ||||||| |||||||| |||| |||||| |||||||| Sbjct: 1556 ccgaaatcccaagggttcctccggaaggctcgtccgcggagggt 1599 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 712 gaccgatagtgaaccagtaccgcgagggaaaggtgaa 748
>emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (partial) and 5S rRNA Length = 2957 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 1147 acgaagcagaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatccgatgcc 1206 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 | ||||||| ||||||||||||| |||| |||||| |||||||| Sbjct: 1207 ctgaaaacctaaggtttcctccggaaggctcgtccgcggagggt 1250
>emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 2 Length = 1291 Score = 127 bits (64), Expect = 3e-26 Identities = 88/96 (91%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 266 acgaatcggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgcc 325 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtcca 204 ||||||||| |||| ||||||| | ||| ||||||| Sbjct: 326 ccgaaaacctaagggttcctccactaggctcgtcca 361
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 2657052 acgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgcc 2656993 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||| ||||||| |||||||| |||| |||||| |||||||| Sbjct: 2656992 ccgaaatcccaagggttcctccggaaggctcgtccgcggagggt 2656949 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 571869 acgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgcc 571928 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||| ||||||| |||||||| |||| |||||| |||||||| Sbjct: 571929 ccgaaatcccaagggttcctccggaaggctcgtccgcggagggt 571972 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 2657836 gaccgatagtgaaccagtaccgcgagggaaaggtgaa 2657800 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 571085 gaccgatagtgaaccagtaccgcgagggaaaggtgaa 571121
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 125 bits (63), Expect = 1e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1542 gaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1601 Query: 177 ccaaggtttcctccgcaaggttcgtcc 203 | |||| ||||||| | |||||||||| Sbjct: 1602 ctaagggttcctccactaggttcgtcc 1628 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 ||||||||||||| ||||||||||||||| Sbjct: 592 gaccgatagcgaaatagtaccgcgagggaa 621
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 125 bits (63), Expect = 1e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 117 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 176 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1542 gaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1601 Query: 177 ccaaggtttcctccgcaaggttcgtcc 203 | |||| ||||||| | |||||||||| Sbjct: 1602 ctaagggttcctccactaggttcgtcc 1628 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 ||||||||||||| ||||||||||||||| Sbjct: 592 gaccgatagcgaaatagtaccgcgagggaa 621
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||| |||| ||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 861 acgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgcc 920 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 | |||| || |||| |||||||| |||| |||||| |||||||||| Sbjct: 921 ctgaaatcctaagggttcctccggaaggctcgtccgcggagggtga 966 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 ||||||||| |||| ||||||||||||||| Sbjct: 73 gaccgatagagaactagtaccgcgagggaa 102
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 ||||||| |||| ||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 859 acgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgcc 918 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 | |||| || |||| |||||||| |||| |||||| |||||||||| Sbjct: 919 ctgaaatcctaagggttcctccggaaggctcgtccgcggagggtga 964 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 ||||||||| |||| ||||||||||||||| Sbjct: 73 gaccgatagagaactagtaccgcgagggaa 102
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 193113 acgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgtc 193172 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||| ||||||||||||| | ||||||| Sbjct: 193173 ccgaaaacctaagggttcctttacaaggttcgtccatgaagggtga 193218 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 143669 acgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgtc 143610 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 ||||||||| |||| ||||| ||||||||||||| | ||||||| Sbjct: 143609 ccgaaaacctaagggttcctttacaaggttcgtccatgaagggtga 143564
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||| |||| Sbjct: 1233 acgaggcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgcc 1292 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||| |||| | | |||| |||||||||| |||||| Sbjct: 1293 ccgaaaacccaagggttcccctggaaggctcgtccacggggggtga 1338 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgc 75 |||| ||||||||||||||||||||||| Sbjct: 1172 aaaaagcatcggtaggggagcgttccgc 1199 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 |||||||||||||| ||||||| ||||||| Sbjct: 441 gaccgatagcgaactagtaccgtgagggaa 470
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||| |||| Sbjct: 1246 acgaggcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgcc 1305 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||| |||| | | |||| |||||||||| |||||| Sbjct: 1306 ccgaaaacccaagggttcccctggaaggctcgtccacggggggtga 1351 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgc 75 |||| ||||||||||||||||||||||| Sbjct: 1185 aaaaagcatcggtaggggagcgttccgc 1212 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 |||||||||||||| ||||||| ||||||| Sbjct: 454 gaccgatagcgaactagtaccgtgagggaa 483
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||| |||| Sbjct: 5820 acgaggcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgcc 5879 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtga 214 |||||||||||||| |||| | | |||| |||||||||| |||||| Sbjct: 5880 ccgaaaacccaagggttcccctggaaggctcgtccacggggggtga 5925 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 48 aaaatgcatcggtaggggagcgttccgc 75 |||| ||||||||||||||||||||||| Sbjct: 5759 aaaaagcatcggtaggggagcgttccgc 5786 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaa 39 |||||||||||||| ||||||| ||||||| Sbjct: 5028 gaccgatagcgaactagtaccgtgagggaa 5057
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 121 bits (61), Expect = 2e-24 Identities = 133/157 (84%) Strand = Plus / Minus Query: 58 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcgg 117 |||||||||||||||||||| || | ||||| | || ||| || ||| || | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 118 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 177 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 178 caaggtttcctccgcaaggttcgtccacggagggtga 214 |||| ||||| | ||||||||||||| ||||||||| Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtga 170138 Score = 121 bits (61), Expect = 2e-24 Identities = 133/157 (84%) Strand = Plus / Plus Query: 58 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcgg 117 |||||||||||||||||||| || | ||||| | || ||| || ||| || | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 118 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 177 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 178 caaggtttcctccgcaaggttcgtccacggagggtga 214 |||| ||||| | ||||||||||||| ||||||||| Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtga 122788
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 121 bits (61), Expect = 2e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 128 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 187 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 2725 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 2784 Query: 188 tccgcaaggttcgtcca 204 ||| | ||||||||||| Sbjct: 2785 tccactaggttcgtcca 2801 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 469 gaccgatagcgaaatagtaccacgagggaaaggtgaa 505
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 121 bits (61), Expect = 2e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 128 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 187 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 3449 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 3508 Query: 188 tccgcaaggttcgtcca 204 ||| | ||||||||||| Sbjct: 3509 tccactaggttcgtcca 3525 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 10 gaccgatagcgaacaagtaccgcgagggaaagatgaa 46 ||||||||||||| |||||| |||||||||| |||| Sbjct: 469 gaccgatagcgaaatagtaccacgagggaaaggtgaa 505
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 121 bits (61), Expect = 2e-24 Identities = 133/157 (84%) Strand = Plus / Plus Query: 58 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcgg 117 |||||||||||||||||||| || | ||||| | || ||| || ||| || | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 118 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 177 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 178 caaggtttcctccgcaaggttcgtccacggagggtga 214 |||| ||||| | ||||||||||||| ||||||||| Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtga 1379
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 63414 cggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatccaatgccccgaaa 63355 Query: 175 acccaaggtttcctccgcaaggttcgtcc 203 | | |||||||||| | ||||||||||| Sbjct: 63354 atctaaggtttcctttggaaggttcgtcc 63326 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccg 74 ||||||||||||||||||||| Sbjct: 63475 catcggtaggggagcgttccg 63455
>emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene, exon 2 Length = 659 Score = 121 bits (61), Expect = 2e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 128 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 187 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 60 Query: 188 tccgcaaggttcgtcca 204 ||| | ||||||||||| Sbjct: 61 tccactaggttcgtcca 77
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 121 bits (61), Expect = 2e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 175 acccaaggtttcc-tccgcaaggttcgtccacggagggtga 214 ||| |||| |||| | || |||| ||||||||| ||||||| Sbjct: 114116 acctaagggttcctttcggaaggctcgtccacgaagggtga 114076 Score = 121 bits (61), Expect = 2e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 115 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 174 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 175 acccaaggtttcc-tccgcaaggttcgtccacggagggtga 214 ||| |||| |||| | || |||| ||||||||| ||||||| Sbjct: 3401 acctaagggttcctttcggaaggctcgtccacgaagggtga 3441 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 catcggtaggggagcgttccg 74 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 catcggtaggggagcgttccg 74 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 119 bits (60), Expect = 8e-24 Identities = 93/104 (89%) Strand = Plus / Plus Query: 109 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 168 |||| ||||||| |||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 1450879 acgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgcc 1450938 Query: 169 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 212 |||||||||||||| |||| ||| |||| |||||| ||| |||| Sbjct: 1450939 ccgaaaacccaagggttcccccggaaggctcgtccgcggggggt 1450982 Score = 117 bits (59), Expect = 3e-23 Identities = 131/155 (84%) Strand = Plus / Minus Query: 58 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtctacgaagcgg 117 |||||||||||||||||| ||| | ||||| | |||||||| | || |||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 118 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 177 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 178 caaggtttcctccgcaaggttcgtccacggagggt 212 ||||| |||| ||| |||| |||||| ||| |||| Sbjct: 2050553 caagggttcccccggaaggctcgtccgcggggggt 2050519 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,478,489 Number of Sequences: 3902068 Number of extensions: 2478489 Number of successful extensions: 90202 Number of sequences better than 10.0: 25425 Number of HSP's better than 10.0 without gapping: 25387 Number of HSP's successfully gapped in prelim test: 56 Number of HSP's that attempted gapping in prelim test: 61490 Number of HSP's gapped (non-prelim): 28680 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
