ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet45e01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF123608.1|AF123608 Triticum aestivum clone CYP73-TA cytochrome P450 mRNA, complete cds Length = 1506 Score = 248 bits (125), Expect = 6e-63 Identities = 140/145 (96%) Strand = Plus / Plus Query: 82 atggacgtcctcctcctggagaaggccctgctgggcctcttcgccgcggcggtgctggcc 141 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 atggacgtcctcctcctggagaaggccctcctgggcctcttcgccgcggcggtgctggcc 60 Query: 142 atcgccgtagccaagctcgccggcaagcgcttccgcctcccacccggcccctccggcgcc 201 |||||||| ||||||||| |||||||||||||||||||||| || ||||||||||||||| Sbjct: 61 atcgccgtcgccaagctcaccggcaagcgcttccgcctcccccctggcccctccggcgcc 120 Query: 202 cccatcgtcggcaactggctgcagg 226 ||||||||||||||||||||||||| Sbjct: 121 cccatcgtcggcaactggctgcagg 145
>gb|AY104175.1| Zea mays PCO098406 mRNA sequence Length = 1755 Score = 131 bits (66), Expect = 1e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 93 cctcctggagaaggccctgctgggcctcttcgccgcggcggtgctggccatcgccgtagc 152 |||||| |||||||||||||||||||| ||||||||||| ||| ||||||||||||| || Sbjct: 74 cctcctagagaaggccctgctgggcctgttcgccgcggctgtggtggccatcgccgtggc 133 Query: 153 caagctcgccggcaagcgcttccgcctcccacccggcccctccggcgcccccatcgtcgg 212 |||||| |||||||||| | |||||||||||| || ||| | ||||||||| | || || Sbjct: 134 caagctgaccggcaagcggtaccgcctcccaccggggcccccgggcgcccccgtggtggg 193 Query: 213 caactggctgcagg 226 ||||||||||||| Sbjct: 194 aaactggctgcagg 207
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 121 bits (61), Expect = 1e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 82 atggacgtcctcctcctggagaaggccctgctgggcctcttcgccgcggcggtgctggcc 141 ||||||| ||||||| ||||||||| ||| |||||||| |||| ||||||||||||||| Sbjct: 106429 atggacgccctcctcgtggagaaggtcctcctgggcctgttcgtggcggcggtgctggcc 106370 Query: 142 atcgccgtagccaagctcgccggcaagcgcttccgcctcccacccggcccctccggcgcc 201 | | || ||||||||| |||| ||| | |||||||||| ||||||||| ||||||| Sbjct: 106369 ctagtggtggccaagctcaccgggaagaggctccgcctcccgcccggccccgccggcgcg 106310 Query: 202 cccatcgtcggcaactggctgcagg 226 |||||||||||||||||||| |||| Sbjct: 106309 cccatcgtcggcaactggctccagg 106285
>gb|AY034143.1| Sorghum bicolor cinnamic acid 4-hydroxylase (C4H) mRNA, complete cds Length = 1762 Score = 121 bits (61), Expect = 1e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 94 ctcctggagaaggccctgctgggcctcttcgccgcggcggtgctggccatcgccgtagcc 153 |||||||||||||||||||||||||| ||||| ||||||||||| || ||||||| || Sbjct: 79 ctcctggagaaggccctgctgggcctgttcgcggcggcggtgctcgctgtcgccgtggcg 138 Query: 154 aagctcgccggcaagcgcttccgcctcccacccggcccctccggcgcccccatcgtcggc 213 ||||| |||||||||||| |||||| || || |||||| | ||||||||| | || ||| Sbjct: 139 aagctaaccggcaagcgctaccgcctgccccctggccccgcgggcgcccccgtggtgggc 198 Query: 214 aactggctgcagg 226 ||||||||||||| Sbjct: 199 aactggctgcagg 211
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 121 bits (61), Expect = 1e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 82 atggacgtcctcctcctggagaaggccctgctgggcctcttcgccgcggcggtgctggcc 141 ||||||| ||||||| ||||||||| ||| |||||||| |||| ||||||||||||||| Sbjct: 14771015 atggacgccctcctcgtggagaaggtcctcctgggcctgttcgtggcggcggtgctggcc 14770956 Query: 142 atcgccgtagccaagctcgccggcaagcgcttccgcctcccacccggcccctccggcgcc 201 | | || ||||||||| |||| ||| | |||||||||| ||||||||| ||||||| Sbjct: 14770955 ctagtggtggccaagctcaccgggaagaggctccgcctcccgcccggccccgccggcgcg 14770896 Query: 202 cccatcgtcggcaactggctgcagg 226 |||||||||||||||||||| |||| Sbjct: 14770895 cccatcgtcggcaactggctccagg 14770871
>dbj|AK104994.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H11, full insert sequence Length = 1796 Score = 121 bits (61), Expect = 1e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 82 atggacgtcctcctcctggagaaggccctgctgggcctcttcgccgcggcggtgctggcc 141 ||||||| ||||||| ||||||||| ||| |||||||| |||| ||||||||||||||| Sbjct: 80 atggacgccctcctcgtggagaaggtcctcctgggcctgttcgtggcggcggtgctggcc 139 Query: 142 atcgccgtagccaagctcgccggcaagcgcttccgcctcccacccggcccctccggcgcc 201 | | || ||||||||| |||| ||| | |||||||||| ||||||||| ||||||| Sbjct: 140 ctagtggtggccaagctcaccgggaagaggctccgcctcccgcccggccccgccggcgcg 199 Query: 202 cccatcgtcggcaactggctgcagg 226 |||||||||||||||||||| |||| Sbjct: 200 cccatcgtcggcaactggctccagg 224
>dbj|AK100598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107C01, full insert sequence Length = 1838 Score = 121 bits (61), Expect = 1e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 82 atggacgtcctcctcctggagaaggccctgctgggcctcttcgccgcggcggtgctggcc 141 ||||||| ||||||| ||||||||| ||| |||||||| |||| ||||||||||||||| Sbjct: 78 atggacgccctcctcgtggagaaggtcctcctgggcctgttcgtggcggcggtgctggcc 137 Query: 142 atcgccgtagccaagctcgccggcaagcgcttccgcctcccacccggcccctccggcgcc 201 | | || ||||||||| |||| ||| | |||||||||| ||||||||| ||||||| Sbjct: 138 ctagtggtggccaagctcaccgggaagaggctccgcctcccgcccggccccgccggcgcg 197 Query: 202 cccatcgtcggcaactggctgcagg 226 |||||||||||||||||||| |||| Sbjct: 198 cccatcgtcggcaactggctccagg 222
>gb|AF548370.1| Ruta graveolens cinnamate 4-hydroxylase (C4H) mRNA, C4H-v2 allele, complete cds Length = 1751 Score = 52.0 bits (26), Expect = 8e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 97 ctggagaaggccctgctgggcctcttcgccgcggcggt 134 |||||||||||||| || |||||||||||||| ||||| Sbjct: 91 ctggagaaggccctcctaggcctcttcgccgccgcggt 128
>emb|AJ309127.1|RGR309127 Ruta graveolens mRNA for putative cinnamate 4-hydroxylase (cyp73A32 gene) Length = 1799 Score = 52.0 bits (26), Expect = 8e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 97 ctggagaaggccctgctgggcctcttcgccgcggcggt 134 |||||||||||||| || |||||||||||||| ||||| Sbjct: 91 ctggagaaggccctcctaggcctcttcgccgccgcggt 128
>gb|L07634.1|PHVC4HYDRO Vigna radiata var. radiata cinnamate 4-hydroxylase mRNA, complete cds Length = 1766 Score = 46.1 bits (23), Expect = 0.047 Identities = 32/35 (91%) Strand = Plus / Plus Query: 89 tcctcctcctggagaaggccctgctgggcctcttc 123 ||||||||||||||||| |||| || ||||||||| Sbjct: 33 tcctcctcctggagaagaccctcctcggcctcttc 67
>gb|DQ075002.1| Malus x domestica cinnamic acid hydroxylase (C4H1) mRNA, complete cds Length = 1946 Score = 46.1 bits (23), Expect = 0.047 Identities = 38/43 (88%) Strand = Plus / Plus Query: 82 atggacgtcctcctcctggagaaggccctgctgggcctcttcg 124 |||||| ||||||||||||| ||| |||| ||||| ||||||| Sbjct: 295 atggacctcctcctcctggaaaagacccttctgggtctcttcg 337
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 ggcctcttcgccgcggcggtgct 137 ||||||||||||||||||||||| Sbjct: 1344288 ggcctcttcgccgcggcggtgct 1344266
>gb|AC121849.3| Mus musculus BAC clone RP24-90K18 from chromosome 6, complete sequence Length = 205721 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 39734 gacacacaggcacaggcacagg 39713
>gb|AC124425.3| Mus musculus BAC clone RP24-230N16 from chromosome 5, complete sequence Length = 178931 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 cacaggcacaggagccacacac 66 |||||||||||||||||||||| Sbjct: 122940 cacaggcacaggagccacacac 122961
>gb|AC105305.8| Mus musculus strain C57BL/6J clone rp23-80n4 map 17, complete sequence Length = 214567 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 199132 gacacacaggcacaggcacagg 199111 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 199050 gacacacaggcacaggcacagg 199029 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 198792 gacacacaggcacaggcacagg 198771 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcaca 54 |||||||||||||||||||| Sbjct: 198988 gacacacaggcacaggcaca 198969
>gb|AC105302.27| Mus musculus strain C57BL/6J clone rp23-45h18 map 17, complete sequence Length = 238088 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 174111 gacacacaggcacaggcacagg 174132 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 173853 gacacacaggcacaggcacagg 173874 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 173771 gacacacaggcacaggcacagg 173792 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcaca 54 |||||||||||||||||||| Sbjct: 173915 gacacacaggcacaggcaca 173934
>gb|AC109609.12| Mus musculus strain C57BL/6J clone rp23-167h1 map 17, complete sequence Length = 167619 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 82992 gacacacaggcacaggcacagg 83013 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 82734 gacacacaggcacaggcacagg 82755 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 82652 gacacacaggcacaggcacagg 82673 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcaca 54 |||||||||||||||||||| Sbjct: 82796 gacacacaggcacaggcaca 82815
>emb|AL603925.20| Mouse DNA sequence from clone RP23-175K24 on chromosome 11 Contains the gene for nuclear DNA binding protein C1d and a aldo-keto reductase family 1 member B3 (aldose reductase) (Akr1b3) pseudogene, complete sequence Length = 232869 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 172506 gacacacaggcacaggcacagg 172527
>dbj|AB234902.1| Verbena x hybrida mRNA for Cinnamic acid 4-hydroxylase, complete cds, cultivar: Tapien Pink Length = 1768 Score = 44.1 bits (22), Expect = 0.18 Identities = 34/38 (89%) Strand = Plus / Plus Query: 91 ctcctcctggagaaggccctgctgggcctcttcgccgc 128 |||||||||||||||||||| || || |||||| |||| Sbjct: 65 ctcctcctggagaaggccctcctagggctcttctccgc 102
>gb|AC147632.3| Mus musculus BAC clone RP23-326H18 from chromosome 5, complete sequence Length = 185519 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 cacaggcacaggagccacacac 66 |||||||||||||||||||||| Sbjct: 150784 cacaggcacaggagccacacac 150763
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 133 gtgctggccatcgccgtagccaagct 158 ||||||||||||||||| |||||||| Sbjct: 1271345 gtgctggccatcgccgtcgccaagct 1271370
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.18 Identities = 31/34 (91%) Strand = Plus / Minus Query: 108 cctgctgggcctcttcgccgcggcggtgctggcc 141 |||||||||| |||||||||||||||| ||||| Sbjct: 2389248 cctgctgggcaccttcgccgcggcggtggtggcc 2389215
>dbj|AP000439.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-44E22, complete sequence Length = 105962 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 cctggagaaggccctgctgggc 117 |||||||||||||||||||||| Sbjct: 69574 cctggagaaggccctgctgggc 69595
>gb|AC093319.18| Mus musculus strain C57BL/6J chromosome 17 clone rp23-258p19, complete sequence Length = 166527 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 88969 gacacacaggcacaggcacagg 88948 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 88887 gacacacaggcacaggcacagg 88866 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcaca 54 |||||||||||||||||||| Sbjct: 88825 gacacacaggcacaggcaca 88806 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcaca 54 |||||||||||||||||||| Sbjct: 88629 gacacacaggcacaggcaca 88610
>gb|AC132431.3| Mus musculus BAC clone RP23-211M23 from 6, complete sequence Length = 207155 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 32162 gacacacaggcacaggcacagg 32183
>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete sequence Length = 210427 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 25158 gacacacaggcacaggcacagg 25179
>emb|AL844865.6| Mouse DNA sequence from clone RP23-350L23 on chromosome 2, complete sequence Length = 197785 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcacagg 56 |||||||||||||||||||||| Sbjct: 175419 gacacacaggcacaggcacagg 175398
>gb|AC107725.10| Mus musculus chromosome 5, clone RP23-477O15, complete sequence Length = 169321 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 72467 acacacaggcacaggcacagg 72487
>gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, complete sequence Length = 214765 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 193514 acacacaggcacaggcacagg 193534
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 1064278 acacacaggcacaggcacagg 1064258
>gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosome 6, complete sequence Length = 209230 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcacag 55 ||||||||||||||||||||| Sbjct: 124734 gacacacaggcacaggcacag 124714
>gb|AC099948.9| Mus musculus chromosome 10, clone RP23-19D21, complete sequence Length = 203086 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 99993 acacacaggcacaggcacagg 99973
>gb|AC127594.3| Mus musculus BAC clone RP23-44G8 from chromosome 7, complete sequence Length = 209828 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 24094 acacacaggcacaggcacagg 24074
>gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, complete sequence Length = 139884 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 105363 acacacaggcacaggcacagg 105383
>gb|AC116659.3| Mus musculus BAC clone RP24-147E15 from 7, complete sequence Length = 140476 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 19644 acacacaggcacaggcacagg 19624
>gb|AC158217.4| Mus musculus chromosome 5, clone RP24-377B20, complete sequence Length = 160008 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 20453 acacacaggcacaggcacagg 20433
>ref|XM_780739.1| PREDICTED: Strongylocentrotus purpuratus similar to ubiquitin fusion degradation 1-like (LOC580698), mRNA Length = 918 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 cacaggcacaggagccacaca 65 ||||||||||||||||||||| Sbjct: 47 cacaggcacaggagccacaca 27
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 gccgcggcggtgctggccatcgccg 148 |||||||| |||||||||||||||| Sbjct: 4600 gccgcggccgtgctggccatcgccg 4624
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 gccgcggcggtgctggccatcgccg 148 |||||||| |||||||||||||||| Sbjct: 261385 gccgcggccgtgctggccatcgccg 261409
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 gccgcggcggtgctggccatcgccg 148 |||||||| |||||||||||||||| Sbjct: 129718 gccgcggccgtgctggccatcgccg 129742
>gb|AC023715.4| Drosophila melanogaster X BAC RP98-17H6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160629 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 115501 acacacaggcacaggcacagg 115481
>gb|AC151548.3| Macropus eugenii clone ME_KBa-603H10, complete sequence Length = 111549 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 1591 acacacaggcacaggcacagg 1571
>gb|AC154811.2| Mus musculus BAC clone RP24-531D17 from chromosome 14, complete sequence Length = 167122 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 140605 acacacaggcacaggcacagg 140625
>gb|AC011510.7|AC011510 Homo sapiens chromosome 19 clone CTD-2195B23, complete sequence Length = 129402 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 59261 acacacaggcacaggcacagg 59241
>emb|AL672107.5| Zebrafish DNA sequence from clone BUSM1-84N18 in linkage group 1 Contains a novel lambda recombinase like pseudogene, a putative novel gene and two CpG islands, complete sequence Length = 106684 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 61639 acacacaggcacaggcacagg 61619
>gb|AE003432.5| Drosophila melanogaster chromosome X, section 16 of 74 of the complete sequence Length = 319328 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 45233 acacacaggcacaggcacagg 45213
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 cttccgcctcccacccggcccctcc 195 ||||||||||||||||| ||||||| Sbjct: 161410 cttccgcctcccacccgccccctcc 161386
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 cttccgcctcccacccggcccctcc 195 ||||||||||||||||| ||||||| Sbjct: 177589 cttccgcctcccacccgccccctcc 177565
>gb|AC146616.3| Mus musculus BAC clone RP23-9A18 from 7, complete sequence Length = 198813 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 54525 acacacaggcacaggcacagg 54545
>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence Length = 129237 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacagg 56 ||||||||||||||||||||| Sbjct: 83919 acacacaggcacaggcacagg 83899
>gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, complete sequence Length = 200566 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 acacacaggcacaggcacag 55 |||||||||||||||||||| Sbjct: 39628 acacacaggcacaggcacag 39647
>gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome 13, complete sequence Length = 155751 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cacaggcacaggcacaggag 58 |||||||||||||||||||| Sbjct: 28377 cacaggcacaggcacaggag 28358
>gb|AC162037.2| Mus musculus chromosome 8, clone RP23-35K23, complete sequence Length = 241548 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 76157 cacacaggcacaggcacagg 76176 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 76131 cacacaggcacaggcacagg 76150
>gb|AY644468.1| Saccharum officinarum mitochondrial alternative oxidase 1d mRNA, complete cds; nuclear gene for mitochondrial product Length = 1108 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ccgcggcggtgctggccatc 144 |||||||||||||||||||| Sbjct: 38 ccgcggcggtgctggccatc 19
>gb|BT015224.1| Drosophila melanogaster RE33368 full insert cDNA Length = 2540 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 caggcacaggcacaggagccacac 64 ||||||||||||||||||| |||| Sbjct: 1977 caggcacaggcacaggagcaacac 2000
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gccgcggcggtgctggccat 143 |||||||||||||||||||| Sbjct: 656945 gccgcggcggtgctggccat 656926
>gb|AY881693.1| Baboon herpesvirus 2 strain 860 ICP22 (US1), US2 (US2), protein kinase (US3), glycoprotein G (US4), glycoprotein J (US5), glycoprotein D (US6), glycoprotein I (US7), glycoprotein E (US8), US8.5 (US8.5), US9 (US9), US10 (US10), tegument protein (US11), and ICP47 (US12) genes, complete cds Length = 15072 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 acacaggcacaggcacagga 57 |||||||||||||||||||| Sbjct: 4578 acacaggcacaggcacagga 4559
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cgcggcggtgctggccatcg 145 |||||||||||||||||||| Sbjct: 3643933 cgcggcggtgctggccatcg 3643914
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 agctcgccggcaagcgcttc 174 |||||||||||||||||||| Sbjct: 1337769 agctcgccggcaagcgcttc 1337750
>gb|AC161514.4| Mus musculus chromosome 7, clone RP23-378L12, complete sequence Length = 190426 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 103719 cacacaggcacaggcacagg 103738 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 103599 cacacaggcacaggcacagg 103618
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccaagctcgccggcaagcgc 171 |||||||||||||||||||| Sbjct: 13934242 ccaagctcgccggcaagcgc 13934261 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gacgtcctcctcctggagaa 104 |||||||||||||||||||| Sbjct: 11055685 gacgtcctcctcctggagaa 11055666
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccaagctcgccggcaagcgc 171 |||||||||||||||||||| Sbjct: 77240 ccaagctcgccggcaagcgc 77221
>gb|AC126265.3| Mus musculus BAC clone RP23-383O12 from chromosome 16, complete sequence Length = 186172 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cacaggcacaggcacaggag 58 |||||||||||||||||||| Sbjct: 159892 cacaggcacaggcacaggag 159873
>gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, complete sequence Length = 184206 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 acacacaggcacaggcacag 55 |||||||||||||||||||| Sbjct: 54598 acacacaggcacaggcacag 54617
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 cgccgtagccaagctcgccg 163 |||||||||||||||||||| Sbjct: 103585 cgccgtagccaagctcgccg 103566
>ref|XM_848159.1| PREDICTED: Canis familiaris similar to transmembrane protein 24 (LOC610622), mRNA Length = 2991 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ggccctgctgggcctcttcgccgc 128 ||||||||||| |||||||||||| Sbjct: 39 ggccctgctggtcctcttcgccgc 62
>ref|XM_500654.1| Yarrowia lipolytica CLIB122, YALI0B08778g predicted mRNA Length = 3024 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgcggcggtgctggccatcg 145 |||||||||||||||||||| Sbjct: 51 cgcggcggtgctggccatcg 70
>gb|AC063952.15| Homo sapiens 3 BAC RP11-174O3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152024 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 39949 cacacaggcacaggcacagg 39930
>emb|AL049695.20|HSJ236J16 Human DNA sequence from clone RP1-236J16 on chromosome 6q21-22.1 Contains a cytokine inducible SH2-containing protein 6 (CISH6) pseudogene, complete sequence Length = 106348 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacag 55 |||||||||||||||||||| Sbjct: 32837 acacacaggcacaggcacag 32818
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gacgtcctcctcctggagaa 104 |||||||||||||||||||| Sbjct: 77437 gacgtcctcctcctggagaa 77456
>emb|BX070349.1|CNS09QG1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC7BF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 829 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 gccaagctcgccggcaagcgcttccgcc 178 |||||| ||||||||||| ||||||||| Sbjct: 489 gccaagttcgccggcaagagcttccgcc 462
>emb|BX042901.1|CNS0959L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC15AF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 922 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 gccaagctcgccggcaagcgcttccgcc 178 |||||| ||||||||||| ||||||||| Sbjct: 464 gccaagttcgccggcaagagcttccgcc 437
>emb|BX036938.1|CNS090NY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA9AG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 299 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 gccaagctcgccggcaagcgcttccgcc 178 |||||| ||||||||||| ||||||||| Sbjct: 256 gccaagttcgccggcaagagcttccgcc 229
>emb|BX036809.1|CNS090KD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA9AA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 984 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 gccaagctcgccggcaagcgcttccgcc 178 |||||| ||||||||||| ||||||||| Sbjct: 480 gccaagttcgccggcaagagcttccgcc 453
>emb|BX027684.1|CNS08TIW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41BF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1024 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 gccaagctcgccggcaagcgcttccgcc 178 |||||| ||||||||||| ||||||||| Sbjct: 502 gccaagttcgccggcaagagcttccgcc 475
>emb|BX013968.1|CNS08IXW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA20DH10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 962 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 gccaagctcgccggcaagcgcttccgcc 178 |||||| ||||||||||| ||||||||| Sbjct: 475 gccaagttcgccggcaagagcttccgcc 448
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gccgcggcggtgctggccat 143 |||||||||||||||||||| Sbjct: 313586 gccgcggcggtgctggccat 313567
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 agctcgccggcaagcgcttc 174 |||||||||||||||||||| Sbjct: 2655242 agctcgccggcaagcgcttc 2655223
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gccgcggcggtgctggccat 143 |||||||||||||||||||| Sbjct: 313736 gccgcggcggtgctggccat 313717
>emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on chromosome 11 Contains the P4ha2 gene for procollagen-proline 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase) alpha II polypeptide, a novel pseudogene, two novel genes, a diazepam binding inhibitor (Dbi) pseudogene, the Csf2 gene for colony stimulating factor 2 (granulocyte-macrophage), the Il3 gene for interleukin 3 and a CpG island, complete sequence Length = 199500 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 141915 cacacaggcacaggcacagg 141896
>emb|AL954256.1| Pan troglodytes chromosome 22 clone PTB-129I16 map 22q22.3, complete sequence Length = 180777 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gacacacaggcacaggcaca 54 |||||||||||||||||||| Sbjct: 146480 gacacacaggcacaggcaca 146499
>gb|AC154796.2| Mus musculus BAC clone RP24-490B17 from chromosome 17, complete sequence Length = 161075 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcaca 54 |||||||||||||||||||| Sbjct: 25967 gacacacaggcacaggcaca 25948
>gb|AE005954.1| Caulobacter crescentus CB15 section 280 of 359 of the complete genome Length = 10098 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cgcggcggtgctggccatcg 145 |||||||||||||||||||| Sbjct: 2128 cgcggcggtgctggccatcg 2109
>gb|AC084429.5| Mus Musculus Chromosome 2 Clone RP23-291P1, complete sequence Length = 181684 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 1503 cacacaggcacaggcacagg 1484
>ref|NM_170166.2| Drosophila melanogaster CG13627-RB, transcript variant B (CG13627), mRNA Length = 2403 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 caggcacaggcacaggagccacac 64 ||||||||||||||||||| |||| Sbjct: 1863 caggcacaggcacaggagcaacac 1886
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ggcggtgctggccatcgccg 148 |||||||||||||||||||| Sbjct: 233375 ggcggtgctggccatcgccg 233356
>ref|NM_143022.2| Drosophila melanogaster CG13627-RA, transcript variant A (CG13627), mRNA Length = 2517 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 caggcacaggcacaggagccacac 64 ||||||||||||||||||| |||| Sbjct: 1977 caggcacaggcacaggagcaacac 2000
>gb|AE009815.1|AE009815 Pyrobaculum aerophilum strain IM2 section 70 of 201 of the complete genome Length = 14701 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ccctgctgggcctcttcgcc 126 |||||||||||||||||||| Sbjct: 4915 ccctgctgggcctcttcgcc 4896
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 cgccgcggcggtgctggcca 142 |||||||||||||||||||| Sbjct: 4183588 cgccgcggcggtgctggcca 4183607
>dbj|AB179173.1| Macaca fascicularis testis cDNA clone: QtsA-14113, similar to human lymphocyte cytosolic protein 1 (L-plastin) (LCP1), mRNA, RefSeq: NM_002298.2 Length = 3322 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 ccgcctcccacccggcccctccgg 197 ||||||||||||||||||| |||| Sbjct: 1646 ccgcctcccacccggccccaccgg 1623
>emb|AJ586737.2| Drosophila virilis partial mod(mdg4) gene Length = 24391 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 acaggcacaggagccacaca 65 |||||||||||||||||||| Sbjct: 22825 acaggcacaggagccacaca 22844
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 tggccatcgccgtagccaagctcg 160 |||||||||||| ||||||||||| Sbjct: 786289 tggccatcgccgcagccaagctcg 786266
>gb|AC092221.1|AC092221 Drosophila melanogaster, chromosome 2L, region 22A-22C, BAC clone BACR16D07, complete sequence Length = 170868 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 141267 cacacaggcacaggcacagg 141286
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 agctcgccggcaagcgcttc 174 |||||||||||||||||||| Sbjct: 105102 agctcgccggcaagcgcttc 105121
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 cgccgtagccaagctcgccg 163 |||||||||||||||||||| Sbjct: 21453835 cgccgtagccaagctcgccg 21453816
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccaagctcgccggcaagcgc 171 |||||||||||||||||||| Sbjct: 13929217 ccaagctcgccggcaagcgc 13929236 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gacgtcctcctcctggagaa 104 |||||||||||||||||||| Sbjct: 11052448 gacgtcctcctcctggagaa 11052429
>gb|AC010708.10|AC010708 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR10E05, complete sequence Length = 188766 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 65679 cacacaggcacaggcacagg 65660
>gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, region 17E-18A, BAC clone BACR32F24, complete sequence Length = 162307 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 159033 cacacaggcacaggcacagg 159014
>gb|AC008205.7|AC008205 Drosophila melanogaster, chromosome 3R, region 96A-96B, BAC clone BACR33F18, complete sequence Length = 215711 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 caggcacaggcacaggagccacac 64 ||||||||||||||||||| |||| Sbjct: 3071 caggcacaggcacaggagcaacac 3094
>gb|AC104650.2| Homo sapiens BAC clone RP11-117J13 from 4, complete sequence Length = 163948 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 acacacaggcacaggcacag 55 |||||||||||||||||||| Sbjct: 140404 acacacaggcacaggcacag 140423
>gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR35N03, complete sequence Length = 169271 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 caggcacaggcacaggagccacac 64 ||||||||||||||||||| |||| Sbjct: 26225 caggcacaggcacaggagcaacac 26202
>gb|AC093110.4| Homo sapiens BAC clone RP11-564H16 from 2, complete sequence Length = 168550 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gcggcgacacacaggcacag 49 |||||||||||||||||||| Sbjct: 162976 gcggcgacacacaggcacag 162957
>gb|AC119271.11| Mus musculus chromosome 7, clone RP24-373F15, complete sequence Length = 178814 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 129390 cacacaggcacaggcacagg 129409 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 129270 cacacaggcacaggcacagg 129289
>gb|AC012456.10| Homo sapiens BAC clone RP11-484O9 from 2, complete sequence Length = 174157 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcaca 54 |||||||||||||||||||| Sbjct: 66768 gacacacaggcacaggcaca 66749
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ttcgccgcggcggtgctggc 140 |||||||||||||||||||| Sbjct: 6998642 ttcgccgcggcggtgctggc 6998623 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ggacgtcctcctcctggagaaggc 107 |||||||||||| ||||||||||| Sbjct: 5901519 ggacgtcctcctgctggagaaggc 5901496
>gb|AC008738.7| Homo sapiens chromosome 19 clone CTD-2540B15, complete sequence Length = 219821 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gcctcccacccggcccctcc 195 |||||||||||||||||||| Sbjct: 129793 gcctcccacccggcccctcc 129812
>ref|XM_576398.1| PREDICTED: Rattus norvegicus transmembrane protein 24 (predicted) (Tmem24_predicted), mRNA Length = 3341 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ggccctgctgggcctcttcgccgc 128 ||||||||||| |||||||||||| Sbjct: 396 ggccctgctggtcctcttcgccgc 419
>gb|AF286647.1|AF286647 Gossypium arboreum cinnamate-4-hydroxylase (LP89) mRNA, complete cds Length = 1706 Score = 40.1 bits (20), Expect = 2.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 89 tcctcctcctggagaaggccctgctgggcctcttcg 124 ||||| || ||||||||||||| |||||||| |||| Sbjct: 38 tcctcttcttggagaaggccctcctgggccttttcg 73
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cgccggcaagcgcttccgcc 178 |||||||||||||||||||| Sbjct: 648079 cgccggcaagcgcttccgcc 648060
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cgtcctcctcctggagaaggccct 110 |||||||||||||||| ||||||| Sbjct: 1470242 cgtcctcctcctggaggaggccct 1470265
>gb|AC153382.1| Mus musculus 10 BAC RP23-9F3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206125 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacag 55 |||||||||||||||||||| Sbjct: 159262 acacacaggcacaggcacag 159243
>dbj|AK120364.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068O19, full insert sequence Length = 2942 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccaagctcgccggcaagcgc 171 |||||||||||||||||||| Sbjct: 1325 ccaagctcgccggcaagcgc 1344
>dbj|AK109731.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-C01, full insert sequence Length = 1516 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gacgtcctcctcctggagaa 104 |||||||||||||||||||| Sbjct: 626 gacgtcctcctcctggagaa 645
>emb|AJ334473.1|HSA334473 Homo sapiens genomic sequence surrounding NotI site, clone NL1-HG20C Length = 848 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gcggcgacacacaggcacag 49 |||||||||||||||||||| Sbjct: 93 gcggcgacacacaggcacag 74
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 acacaggcacaggcacagga 57 |||||||||||||||||||| Sbjct: 138684 acacaggcacaggcacagga 138665
>gb|AC120162.6| Mus musculus chromosome 8, clone RP24-456M18, complete sequence Length = 190755 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 120642 cacacaggcacaggcacagg 120661 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 120616 cacacaggcacaggcacagg 120635
>gb|AE003749.3| Drosophila melanogaster chromosome 3R, section 87 of 118 of the complete sequence Length = 228433 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 caggcacaggcacaggagccacac 64 ||||||||||||||||||| |||| Sbjct: 6641 caggcacaggcacaggagcaacac 6664
>gb|AE003586.3| Drosophila melanogaster chromosome 2L, section 5 of 83 of the complete sequence Length = 306696 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 214138 cacacaggcacaggcacagg 214157
>gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 of 74 of the complete sequence Length = 290619 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 195627 cacacaggcacaggcacagg 195608
>dbj|AP006247.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-269O13, complete sequence Length = 165203 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caggcacaggcacaggagcc 60 |||||||||||||||||||| Sbjct: 137242 caggcacaggcacaggagcc 137261
>dbj|AP006245.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-139F9, complete sequence Length = 155586 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caggcacaggcacaggagcc 60 |||||||||||||||||||| Sbjct: 29129 caggcacaggcacaggagcc 29148
>gb|BC085925.1| Rattus norvegicus transmembrane protein 24, mRNA (cDNA clone MGC:94851 IMAGE:7109537), complete cds Length = 3367 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ggccctgctgggcctcttcgccgc 128 ||||||||||| |||||||||||| Sbjct: 396 ggccctgctggtcctcttcgccgc 419
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 agctcgccggcaagcgcttc 174 |||||||||||||||||||| Sbjct: 490306 agctcgccggcaagcgcttc 490325
>gb|BT001611.1| Drosophila melanogaster RE32656 full insert cDNA Length = 2422 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 caggcacaggcacaggagccacac 64 ||||||||||||||||||| |||| Sbjct: 1863 caggcacaggcacaggagcaacac 1886
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gacgtcctcctcctggagaa 104 |||||||||||||||||||| Sbjct: 99170 gacgtcctcctcctggagaa 99151
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cggcccctccggcgccccca 205 |||||||||||||||||||| Sbjct: 608338 cggcccctccggcgccccca 608319
>gb|AC137947.12| Mus musculus chromosome 5, clone RP23-362I3, complete sequence Length = 214295 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 acacacaggcacaggcacag 55 |||||||||||||||||||| Sbjct: 101117 acacacaggcacaggcacag 101098
>ref|NM_001011996.1| Rattus norvegicus transmembrane protein 24 (Tmem24), mRNA Length = 3367 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ggccctgctgggcctcttcgccgc 128 ||||||||||| |||||||||||| Sbjct: 396 ggccctgctggtcctcttcgccgc 419
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cgtcctcctcctggagaaggccct 110 |||||||||||||||| ||||||| Sbjct: 1144938 cgtcctcctcctggaggaggccct 1144961 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 cctcctggagaaggccctgc 112 |||||||||||||||||||| Sbjct: 263455 cctcctggagaaggccctgc 263436
>gb|AC004440.1|AC004440 Drosophila melanogaster (P1 DS04892 (D66)) DNA sequence, complete sequence Length = 62400 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 59867 cacacaggcacaggcacagg 59848
>gb|AC146603.3| Mus musculus BAC clone RP23-304P17 from 8, complete sequence Length = 167842 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 159683 cacacaggcacaggcacagg 159702 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 159565 cacacaggcacaggcacagg 159584 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 159513 cacacaggcacaggcacagg 159532 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 159449 cacacaggcacaggcacagg 159468 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 159391 cacacaggcacaggcacagg 159410 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 159321 cacacaggcacaggcacagg 159340
>emb|AL772324.5| Mouse DNA sequence from clone RP23-440O7 on chromosome 4, complete sequence Length = 135401 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gacacacaggcacaggcaca 54 |||||||||||||||||||| Sbjct: 20798 gacacacaggcacaggcaca 20779
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cgcggcggtgctggccatcg 145 |||||||||||||||||||| Sbjct: 1207927 cgcggcggtgctggccatcg 1207908
>gb|AC087556.30| Mus musculus strain C57BL/6J chromosome 16 clone rp23-123l9, complete sequence Length = 219730 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cacaggcacaggcacaggag 58 |||||||||||||||||||| Sbjct: 197153 cacaggcacaggcacaggag 197172
>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete sequence Length = 232587 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 acaggcacaggcacaggagc 59 |||||||||||||||||||| Sbjct: 50579 acaggcacaggcacaggagc 50560
>dbj|AP000080.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 16/19, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 caggcacaggcacaggagcc 60 |||||||||||||||||||| Sbjct: 26176 caggcacaggcacaggagcc 26157
>emb|AL645466.12| Mouse DNA sequence from clone RP23-162P18 on chromosome X, complete sequence Length = 141324 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cacacaggcacaggcacagg 56 |||||||||||||||||||| Sbjct: 76026 cacacaggcacaggcacagg 76045 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,765,861 Number of Sequences: 3902068 Number of extensions: 1765861 Number of successful extensions: 155762 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151538 Number of HSP's gapped (non-prelim): 4224 length of query: 226 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 204 effective length of database: 17,147,199,772 effective search space: 3498028753488 effective search space used: 3498028753488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
