ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet42g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 1e-46
2dbj|AK065358.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 1e-46
3dbj|AK059056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 1e-46
4ref|NM_191551.1| Oryza sativa (japonica cultivar-group), predic... 192 6e-46
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
6dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
7dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
8emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chr... 44 0.32
9gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co... 42 1.3
10gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome... 42 1.3
11gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, co... 42 1.3
12gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence 42 1.3
13emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 42 1.3
14gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence 42 1.3
15gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, com... 42 1.3
16dbj|AK022038.1| Homo sapiens cDNA FLJ11976 fis, clone HEMBB1001253 42 1.3
17gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com... 42 1.3
18gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.3
19gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome ... 40 5.0
20emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on ch... 40 5.0
21emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 5.0
22gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Canc... 40 5.0
23gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Can... 40 5.0
24gb|AC124944.8| Homo sapiens 3 BAC RP11-352G9 (Roswell Park Cance... 40 5.0
25gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy... 40 5.0
26gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11... 40 5.0
27gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complet... 40 5.0
28gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complet... 40 5.0 
>dbj|AK106043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E03, full
           insert sequence
          Length = 1617

 Score =  194 bits (98), Expect = 1e-46
 Identities = 232/276 (84%), Gaps = 3/276 (1%)
 Strand = Plus / Plus

                                                                       
Query: 100 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 159
           |||||||||||||||| ||||   | || | |||| ||||||  ||||||| || |||||
Sbjct: 71  ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 127

                                                                       
Query: 160 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 219
           ||||||||| |||||  |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 128 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 187

                                                                       
Query: 220 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 279
            || ||||| |||||||| || |||  |||   || ||||||||||||||||||||||||
Sbjct: 188 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 247

                                                                       
Query: 280 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 339
           |  |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 248 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 307

                                               
Query: 340 gggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
            |||||||||||||||||||| ||||||||||||||
Sbjct: 308 aggcaagggtggcgtcggcgtgaacgtgaagcctgg 343



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
           ||||| |||||||||||||||||||||||
Sbjct: 588 aagggcggcgtcggcgtcaacgtgaagcc 616
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>dbj|AK065358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013011A15, full
           insert sequence
          Length = 1618

 Score =  194 bits (98), Expect = 1e-46
 Identities = 232/276 (84%), Gaps = 3/276 (1%)
 Strand = Plus / Plus

                                                                       
Query: 100 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 159
           |||||||||||||||| ||||   | || | |||| ||||||  ||||||| || |||||
Sbjct: 72  ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 128

                                                                       
Query: 160 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 219
           ||||||||| |||||  |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 129 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 188

                                                                       
Query: 220 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 279
            || ||||| |||||||| || |||  |||   || ||||||||||||||||||||||||
Sbjct: 189 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 248

                                                                       
Query: 280 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 339
           |  |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 249 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 308

                                               
Query: 340 gggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
            |||||||||||||||||||| ||||||||||||||
Sbjct: 309 aggcaagggtggcgtcggcgtgaacgtgaagcctgg 344



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
           ||||| |||||||||||||||||||||||
Sbjct: 589 aagggcggcgtcggcgtcaacgtgaagcc 617
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>dbj|AK059056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F04, full
           insert sequence
          Length = 1616

 Score =  194 bits (98), Expect = 1e-46
 Identities = 232/276 (84%), Gaps = 3/276 (1%)
 Strand = Plus / Plus

                                                                       
Query: 100 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 159
           |||||||||||||||| ||||   | || | |||| ||||||  ||||||| || |||||
Sbjct: 63  ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 119

                                                                       
Query: 160 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 219
           ||||||||| |||||  |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 120 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 179

                                                                       
Query: 220 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 279
            || ||||| |||||||| || |||  |||   || ||||||||||||||||||||||||
Sbjct: 180 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 239

                                                                       
Query: 280 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 339
           |  |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 240 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 299

                                               
Query: 340 gggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
            |||||||||||||||||||| ||||||||||||||
Sbjct: 300 aggcaagggtggcgtcggcgtgaacgtgaagcctgg 335



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
           ||||| |||||||||||||||||||||||
Sbjct: 580 aagggcggcgtcggcgtcaacgtgaagcc 608
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>ref|NM_191551.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1290

 Score =  192 bits (97), Expect = 6e-46
 Identities = 208/245 (84%)
 Strand = Plus / Plus

                                                                       
Query: 131 cttgccttcctactgatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatac 190
           |||| ||||||  ||||||| || |||||||||||||| |||||  |||||| |||||||
Sbjct: 25  cttggcttcctgttgatcgcttcagtaggaagccatgccgctcggactccggagcaatac 84

                                                                       
Query: 191 tgggagtctgctcttcccaacactcccatgccaagctccctctctcaactcctcgacacg 250
           ||| | || |||||||||||| ||||||| || ||||| |||||||| || |||  ||| 
Sbjct: 85  tggaaatcagctcttcccaactctcccatcccgagctcgctctctcagcttctcagcact 144

                                                                       
Query: 251 caagccggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccat 310
             || |||||||||||||||||||||||||  |||||||||||||||||||||||| || 
Sbjct: 145 gcaggcggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcac 204

                                                                       
Query: 311 gggatgcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaag 370
           || | ||| || ||||| || || ||||| |||||||||||||||||||| |||||||||
Sbjct: 205 ggcaagcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaag 264

                
Query: 371 cctgg 375
           |||||
Sbjct: 265 cctgg 269



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
           ||||| |||||||||||||||||||||||
Sbjct: 514 aagggcggcgtcggcgtcaacgtgaagcc 542
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  135 bits (68), Expect = 1e-28
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                            
Query: 256      cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 315
                |||||||||||||||||||||||||  |||||||||||||||||||||||| || || | 
Sbjct: 30584378 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 30584437

                                                                            
Query: 316      gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
                ||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 30584438 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 30584497



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                            
Query: 145      gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 204
                |||||| || |||||||||||||| |||||  |||||| |||||||||| | || |||||
Sbjct: 30583798 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 30583857

                                                 
Query: 205      tcccaacactcccatgccaagctccctctctca 237
                ||||||| ||||||| || ||||| ||||||||
Sbjct: 30583858 tcccaactctcccatcccgagctcgctctctca 30583890



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 344      aagggtggcgtcggcgtcaacgtgaagcc 372
                ||||| |||||||||||||||||||||||
Sbjct: 30584742 aagggcggcgtcggcgtcaacgtgaagcc 30584770
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>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0036G09
          Length = 124118

 Score =  135 bits (68), Expect = 1e-28
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                         
Query: 256   cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 315
             |||||||||||||||||||||||||  |||||||||||||||||||||||| || || | 
Sbjct: 66982 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 67041

                                                                         
Query: 316   gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
             ||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 67042 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 67101



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                         
Query: 145   gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 204
             |||||| || |||||||||||||| |||||  |||||| |||||||||| | || |||||
Sbjct: 66402 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 66461

                                              
Query: 205   tcccaacactcccatgccaagctccctctctca 237
             ||||||| ||||||| || ||||| ||||||||
Sbjct: 66462 tcccaactctcccatcccgagctcgctctctca 66494



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 344   aagggtggcgtcggcgtcaacgtgaagcc 372
             ||||| |||||||||||||||||||||||
Sbjct: 67346 aagggcggcgtcggcgtcaacgtgaagcc 67374
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>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1060H01
          Length = 157987

 Score =  135 bits (68), Expect = 1e-28
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                         
Query: 256   cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 315
             |||||||||||||||||||||||||  |||||||||||||||||||||||| || || | 
Sbjct: 26655 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 26714

                                                                         
Query: 316   gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
             ||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 26715 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 26774



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                         
Query: 145   gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 204
             |||||| || |||||||||||||| |||||  |||||| |||||||||| | || |||||
Sbjct: 26075 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 26134

                                              
Query: 205   tcccaacactcccatgccaagctccctctctca 237
             ||||||| ||||||| || ||||| ||||||||
Sbjct: 26135 tcccaactctcccatcccgagctcgctctctca 26167



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 344   aagggtggcgtcggcgtcaacgtgaagcc 372
             ||||| |||||||||||||||||||||||
Sbjct: 27019 aagggcggcgtcggcgtcaacgtgaagcc 27047
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>emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chromosome X, complete
             sequence
          Length = 121936

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 82    gctgccctctgccctgccctcc 103
             ||||||||||||||||||||||
Sbjct: 19015 gctgccctctgccctgccctcc 19036
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>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence
          Length = 198984

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    cctctgccctgccctccatgg 107
             |||||||||||||||||||||
Sbjct: 89203 cctctgccctgccctccatgg 89223
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>gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome 8, complete sequence
          Length = 201483

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     tcctcattgctgccctctgcc 94
              |||||||||||||||||||||
Sbjct: 104523 tcctcattgctgccctctgcc 104503
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>gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, complete sequence
          Length = 154751

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 216   ccatgccaagctccctctctc 236
             |||||||||||||||||||||
Sbjct: 77707 ccatgccaagctccctctctc 77727
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>gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence
          Length = 146259

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 216   ccatgccaagctccctctctc 236
             |||||||||||||||||||||
Sbjct: 10116 ccatgccaagctccctctctc 10136
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 287    ggcgtccatgtcgacgcgggccatg 311
              ||||||||||||| |||||||||||
Sbjct: 275597 ggcgtccatgtcggcgcgggccatg 275621
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>gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence
          Length = 165072

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    tgccctctgccctgccctcca 104
             |||||||||||||||||||||
Sbjct: 52191 tgccctctgccctgccctcca 52171
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>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence
          Length = 152722

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    tgccctctgccctgccctcca 104
             |||||||||||||||||||||
Sbjct: 22839 tgccctctgccctgccctcca 22859
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>dbj|AK022038.1| Homo sapiens cDNA FLJ11976 fis, clone HEMBB1001253
          Length = 3174

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 81  tgctgccctctgccctgccct 101
           |||||||||||||||||||||
Sbjct: 187 tgctgccctctgccctgccct 167
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>gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, complete sequence
          Length = 194165

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 87    cctctgccctgccctccatgg 107
             |||||||||||||||||||||
Sbjct: 97329 cctctgccctgccctccatgg 97309
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 348    gtggcgtcggcgtcaacgtga 368
              |||||||||||||||||||||
Sbjct: 150874 gtggcgtcggcgtcaacgtga 150854
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>gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome 8, complete sequence
          Length = 252334

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    ggggcaatactgggagtctg 200
              ||||||||||||||||||||
Sbjct: 156303 ggggcaatactgggagtctg 156322
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>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3
              Contains the GTF3C5 gene for general transcription factor
              IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester
              lipase (bile salt-stimulated lipase), the CELP gene for
              carboxyl ester lipase pseudogene, the RALGDS gene for ral
              guanine nucleotide dissociation stimulator, the gene for
              Forssman glycolipid synthetase (FS), three novel genes and
              six CpG islands, complete sequence
          Length = 152863

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     tgctgccctctgccctgccc 100
              ||||||||||||||||||||
Sbjct: 119706 tgctgccctctgccctgccc 119725
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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 82     gctgccctctgccctgccctccat 105
              ||||||||| ||||||||||||||
Sbjct: 328111 gctgccctcggccctgccctccat 328088
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>gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164595

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     ctgccctctgccctgccctc 102
              ||||||||||||||||||||
Sbjct: 124562 ctgccctctgccctgccctc 124543
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>gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157198

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ctgccctctgccctgccctc 102
             ||||||||||||||||||||
Sbjct: 60287 ctgccctctgccctgccctc 60306



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  ctgccctctgccctgccctc 102
           ||||||||||||||||||||
Sbjct: 771 ctgccctctgccctgccctc 790
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>gb|AC124944.8| Homo sapiens 3 BAC RP11-352G9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 121914

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   ctgccctctgccctgccctc 102
            ||||||||||||||||||||
Sbjct: 1275 ctgccctctgccctgccctc 1256
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>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster,
             complete sequence
          Length = 59816

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   ggtgaacgtcggctcgggcg 287
             ||||||||||||||||||||
Sbjct: 42394 ggtgaacgtcggctcgggcg 42413
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>gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11, complete sequence
          Length = 46305

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    tgctgccctctgccctgccc 100
             ||||||||||||||||||||
Sbjct: 44281 tgctgccctctgccctgccc 44262
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>gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complete sequence
          Length = 198162

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    ggggcaatactgggagtctg 200
              ||||||||||||||||||||
Sbjct: 160771 ggggcaatactgggagtctg 160752
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>gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complete sequence
          Length = 40203

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    tgctgccctctgccctgccc 100
             ||||||||||||||||||||
Sbjct: 20582 tgctgccctctgccctgccc 20601


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,537,922
Number of Sequences: 3902068
Number of extensions: 2537922
Number of successful extensions: 56983
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56865
Number of HSP's gapped (non-prelim): 111
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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