ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet41h08 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 234 bits (596), Expect = 9e-62 Identities = 114/133 (85%), Positives = 114/133 (85%) Frame = +1 Query: 40 MAPLPPWRPACLLPLLSVVXXXXXXXXXXXXGGKTGQVTVFWGRNKAEGSLREACDSGMY 219 MAPL RPACLL LLSV GGKTGQVTVFWGRNKAEGSLREACDSGMY Sbjct: 1 MAPLAARRPACLLALLSVAAALFLTPTALAAGGKTGQVTVFWGRNKAEGSLREACDSGMY 60 Query: 220 TMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSNR 399 TMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQ KGVPVSLSIGGYGTGYSLPSNR Sbjct: 61 TMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQSKGVPVSLSIGGYGTGYSLPSNR 120 Query: 400 SALDLFDHLWNXY 438 SALDLFDHLWN Y Sbjct: 121 SALDLFDHLWNSY 133
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 140 bits (354), Expect = 1e-33 Identities = 68/126 (53%), Positives = 88/126 (69%) Frame = +1 Query: 61 RPACLLPLLSVVXXXXXXXXXXXXGGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSF 240 R + L+PL V+ GKTGQ+TVFWGRNK EG+L+E CD+G+YT V +SF Sbjct: 6 RRSWLVPLAMVLAVSSCLAGPAMAAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVISF 65 Query: 241 LDVFGANGKYHLDLSGHDLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFD 420 VFG +G+Y DLSGHDL +GADIKHCQ K + V LSIGG G YSLP+++SA D+ D Sbjct: 66 YSVFG-HGRYWGDLSGHDLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADVAD 124 Query: 421 HLWNXY 438 ++WN + Sbjct: 125 NIWNAH 130
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 129 bits (324), Expect = 3e-30 Identities = 59/96 (61%), Positives = 76/96 (79%) Frame = +1 Query: 151 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQ 330 + V+WGR+K EGSLREACD+G YT V ++F + FG +G+Y LD+SGH L++VGADIKHCQ Sbjct: 32 LAVYWGRHKEEGSLREACDTGRYTTVIITFYNAFG-HGRYSLDISGHPLAAVGADIKHCQ 90 Query: 331 FKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 +G+ V LSIGG G YSLP+N SA D+ D+LWN Y Sbjct: 91 SRGITVLLSIGGQGGAYSLPTNASAADVADNLWNAY 126
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 86.3 bits (212), Expect = 3e-17 Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 5/102 (4%) Frame = +1 Query: 148 QVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGH-----DLSSVGA 312 Q+ ++WG+N EGSL + C+SG Y V ++F+ FG L+L+GH + +S+ + Sbjct: 27 QIVIYWGQNGDEGSLADTCNSGNYGTVILAFVATFGNGQTPALNLAGHCDPATNCNSLSS 86 Query: 313 DIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 DIK CQ G+ V LSIGG GYSL S A D+LWN Y Sbjct: 87 DIKTCQQAGIKVLLSIGGGAGGYSLSSTDDANTFADYLWNTY 128
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 81.6 bits (200), Expect = 8e-16 Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 6/104 (5%) Frame = +1 Query: 145 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGH------DLSSV 306 G + ++WG+N EG+L + C++G Y+ V ++FL+ FG ++L+GH +SV Sbjct: 26 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTSV 85 Query: 307 GADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 I++CQ +G+ V LSIGG YSL S+ A ++ ++LWN + Sbjct: 86 STGIRNCQNRGIKVMLSIGGGAGSYSLSSSNDAQNVANYLWNNF 129
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 79.7 bits (195), Expect = 3e-15 Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 6/106 (5%) Frame = +1 Query: 139 KTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGA-- 312 K G + V+WG++ EG L + C+SG+Y +V ++FL FG L+L+GH S G Sbjct: 23 KAGDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGHCEPSSGGCQ 82 Query: 313 ----DIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 I+HCQ G+ + LSIGG Y+L S A + D+LWN + Sbjct: 83 QLTKSIRHCQSIGIKIMLSIGGGTPTYTLSSVDDARQVADYLWNNF 128
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 79.7 bits (195), Expect = 3e-15 Identities = 51/142 (35%), Positives = 71/142 (50%), Gaps = 6/142 (4%) Frame = +1 Query: 31 KPKMAPLPPWRPACLLPLLSVVXXXXXXXXXXXXGGKTGQVTVFWGRNKAEGSLREACDS 210 KP MA L A LLPLL + G ++V+WG+N EGSL +AC++ Sbjct: 2 KPNMACLKQVS-ALLLPLLFI---------SFFKPSHAGGISVYWGQNGNEGSLADACNT 51 Query: 211 GMYTMVTMSFLDVFGANGKYHLDLSGHDLSSV------GADIKHCQFKGVPVSLSIGGYG 372 G Y V ++FL FG L+L+GH S+ IK CQ K + V LS+GG Sbjct: 52 GNYKYVNIAFLFTFGGGQTPQLNLAGHCNPSINNCNVFSDQIKECQSKDIKVLLSLGGAS 111 Query: 373 TGYSLPSNRSALDLFDHLWNXY 438 YSL S A + +++WN + Sbjct: 112 GSYSLTSADDATQVANYIWNNF 133
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 78.2 bits (191), Expect = 8e-15 Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 6/102 (5%) Frame = +1 Query: 151 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGH-DLSSVGA----- 312 + V+WG+N EGSL++AC++ Y V ++FL FG ++L+GH D S+ G Sbjct: 26 IAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGHCDPSTNGCTKFSP 85 Query: 313 DIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 +I+ CQ KG+ V LS+GG YSL S A L ++LWN + Sbjct: 86 EIQACQAKGIKVLLSLGGGAGSYSLNSAEEATTLANYLWNNF 127
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 77.4 bits (189), Expect = 1e-14 Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 6/106 (5%) Frame = +1 Query: 139 KTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGA-- 312 + G + ++WG+N EGSL + C + Y +V ++FL VFG L+L+GH + GA Sbjct: 21 EAGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACT 80 Query: 313 ----DIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 DI+ CQ +G+ V LS+GG Y L S A ++ ++LWN Y Sbjct: 81 GLSNDIRACQNQGIKVMLSLGGGAGSYFLSSADDARNVANYLWNNY 126
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 74.7 bits (182), Expect = 9e-14 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 6/104 (5%) Frame = +1 Query: 145 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGH------DLSSV 306 G + ++WG+N EG+L C +G Y V ++FL FG L+L+GH + Sbjct: 30 GGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHF 89 Query: 307 GADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 G+ +K CQ +G+ V LS+GG YS+ S A + D+LWN + Sbjct: 90 GSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNF 133
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 73.2 bits (178), Expect = 3e-13 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 6/104 (5%) Frame = +1 Query: 145 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGA---- 312 G + ++WG+N EG+L + C + Y+ V ++FL+ FG ++L+GH + G Sbjct: 27 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 86 Query: 313 --DIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 I+ CQ +G+ V LS+GG Y+L S A ++ D+LWN + Sbjct: 87 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNF 130
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 68.2 bits (165), Expect = 9e-12 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 6/102 (5%) Frame = +1 Query: 151 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGH------DLSSVGA 312 + ++WG+N EGSL C +G Y V ++FL FG+ L+L+GH + + Sbjct: 28 IAIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGSGQAPVLNLAGHCNPDNNGCAFLSD 87 Query: 313 DIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 +I C+ + V V LSIGG YSL S A + + +WN Y Sbjct: 88 EINSCKSQNVKVLLSIGGGAGSYSLSSADDAKQVANFIWNSY 129
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 64.3 bits (155), Expect = 1e-10 Identities = 40/113 (35%), Positives = 52/113 (46%), Gaps = 17/113 (15%) Frame = +1 Query: 151 VTVFWGRNKAEGSLREA-----CDSGMYTMVTMSFLDVFGANGKYHLDLSGH-------- 291 V +WG+N A GS +A C+SG V +SFL VF G ++LS Sbjct: 31 VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGTPEINLSSACAGTYFPN 90 Query: 292 ----DLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 +VGADIK CQ KGV V LS+GG Y S+ +WN + Sbjct: 91 TQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLF 143
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 63.5 bits (153), Expect = 2e-10 Identities = 40/113 (35%), Positives = 52/113 (46%), Gaps = 17/113 (15%) Frame = +1 Query: 151 VTVFWGRNKAEGSLREA-----CDSGMYTMVTMSFLDVFGANGKYHLDLSGH-------- 291 V +WG+N A GS +A C+SG V +SFL VF G ++LS Sbjct: 31 VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGIPEINLSSACAGTYFPN 90 Query: 292 ----DLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 +VGADIK CQ KGV V LS+GG Y S+ +WN + Sbjct: 91 TQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLF 143
>CHI1_RHINI (P29025) Chitinase 1 precursor (EC 3.2.1.14)| Length = 493 Score = 58.9 bits (141), Expect = 5e-09 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 17/113 (15%) Frame = +1 Query: 151 VTVFWGRNKA-----EGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGH-------- 291 V +WG+N A +GSL C SG ++ +SFL+ F G ++L+ Sbjct: 29 VMYYWGQNSAGGSNTQGSLVSYCQSGQVDVIILSFLNKFNMGGLPEINLASACEQTFFPN 88 Query: 292 ----DLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 +VG+DIK CQ GV V LS+GG Y S+ + +WN + Sbjct: 89 TNLLHCPTVGSDIKTCQSNGVKVLLSLGGAAGSYGFSSDSEGQTFAETIWNLF 141
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 57.0 bits (136), Expect = 2e-08 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 8/101 (7%) Frame = +1 Query: 148 QVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAN-GKYHLDLSGHDLSSVG----- 309 ++ V+WG+ + +G LR+ C + Y +V +SFLD FG K L+L G SVG Sbjct: 31 EIAVYWGQRE-DGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSF 89 Query: 310 --ADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHL 426 + IK CQ GV V L++GG YS S A DL ++L Sbjct: 90 LESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYL 130
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 52.4 bits (124), Expect = 5e-07 Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 10/109 (9%) Frame = +1 Query: 142 TGQVTVFWGRNKAEGSLREA--CDSGMYTMVTMSFLDVFG-------ANGKYHLDLSGH- 291 + QV ++WG+N A G R A C +V +SFL++F AN + SG Sbjct: 22 SNQVALYWGQNGAGGQERLAQYCQETDVDIVLLSFLNLFPDPLNVNFANQCGNTFESGLL 81 Query: 292 DLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 S +GADIK CQ G V LS+GG Y SA D LWN + Sbjct: 82 HCSQIGADIKTCQSLGKTVLLSLGGGVGDYGFSDVASATKFADTLWNKF 130
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 52.0 bits (123), Expect = 6e-07 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 11/107 (10%) Frame = +1 Query: 151 VTVFWGRNKA--EGSLREACDSGMYTMVTMSFLDVFG---------ANGKYHLDLSGHDL 297 + +WG+N + +L + C S +++ +SFLD F +G + L+ Sbjct: 20 IAAYWGQNAGGDQQTLGDYCSSSPASIIILSFLDGFPNLSLNFANQCSGTFSSGLA--HC 77 Query: 298 SSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 S +G+DIK CQ +G + LS+GG Y S+ A+ LWN + Sbjct: 78 SQIGSDIKSCQQQGKTILLSLGGATGNYGFSSDSEAVQFAGTLWNKF 124
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 45.4 bits (106), Expect = 6e-05 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 12/108 (11%) Frame = +1 Query: 151 VTVFWGRNKAEGSLREA--CDSGMYTMVTMSFLDVF----------GANGKYHLDLSGHD 294 V V+WG+N R + CDS +V +SF+ F G Y + Sbjct: 25 VAVYWGQNSGGSQQRLSYYCDSDAVDIVILSFMHQFPSPIQLNFANACEGTYTAN-GILQ 83 Query: 295 LSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 ++ DIK+CQ KG + LS+GG Y + +A LW+ + Sbjct: 84 CQTIAEDIKYCQNKGKTILLSLGGAAGSYGFSDDATAKQFAHTLWDLF 131
>CHLY_PARTH (P23473) Bifunctional chitinase/lysozyme [Includes: Chitinase (EC| 3.2.1.14); Lysozyme (EC 3.2.1.17)] (Fragment) Length = 47 Score = 43.5 bits (101), Expect = 2e-04 Identities = 17/41 (41%), Positives = 30/41 (73%) Frame = +1 Query: 145 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGK 267 G + ++WG+N EG+L + C++G Y+ V ++FL+ FG NG+ Sbjct: 1 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFG-NGQ 40
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 9/105 (8%) Frame = +1 Query: 151 VTVFWGRNKA--EGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSS------- 303 + V+WG+N A + SL C+S + +SFL+ F G + S Sbjct: 29 IAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQFPTLGLNFANACSDTFSDGLLHCTQ 88 Query: 304 VGADIKHCQFKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNXY 438 + DI+ CQ G V LS+GG Y + A LW+ + Sbjct: 89 IAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTF 133
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 39.7 bits (91), Expect = 0.003 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Frame = +1 Query: 151 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANG---------------KYHLDLS 285 + V+WG+ + L C+ + ++ + F++VF G Y+ + Sbjct: 31 LAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPAGWPGSNFGNQCADSYYYTKN 90 Query: 286 GHDLS------SVGADIKHCQFKGVPVSLSIGGYGTG--YSLPSNRSALDLFDHLWNXY 438 G + D+ C+ G + LS+GG Y + S SAL+ D LW + Sbjct: 91 GTKTKLLDGCYQIKEDLPKCKALGKTILLSLGGGAVHDFYEVKSEESALNFADFLWGAF 149
>RDRP_AHNNV (Q9DIC5) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) (Protein A) Length = 981 Score = 30.0 bits (66), Expect = 2.6 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 5/84 (5%) Frame = -2 Query: 308 PTEDRSWPERSRWYLPLAPKTSRKDMVTMVYMPESQASRRD--PSALFRPQNTVTWPVFP 135 PT DRS P R+R LP +R + E A+ RD P P +V+ V P Sbjct: 896 PTGDRSAPRRARTALPGVDGHTRCTRRSDRGPGERDANVRDKRPRRSMPPSRSVS-SVPP 954 Query: 134 PAAKAGGV---RNKAATTERRGRR 72 P++ GG R + A RR RR Sbjct: 955 PSSSGGGADGDRVEGAARPRRQRR 978
>TGT_THET8 (Q5SLI7) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 385 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -2 Query: 218 YMPESQASRRDPSALFRPQNTVTWPVFPPAAKAGGVR 108 + E++A R LF P V P+F P AG V+ Sbjct: 6 FQVEARAGRARVGRLFTPHGAVETPLFMPVGTAGSVK 42
>TGT_THET2 (Q72H19) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 385 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -2 Query: 218 YMPESQASRRDPSALFRPQNTVTWPVFPPAAKAGGVR 108 + E++A R LF P V P+F P AG V+ Sbjct: 6 FQVEARAGRARVGRLFTPHGAVETPLFMPVGTAGSVK 42
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -2 Query: 146 PVFPPAAKAGGVRNKAATTERRGRRHAGLQGGSG 45 P PPA +G + TER G+ AG GG G Sbjct: 646 PGVPPATMSGSMMGSDMRTERFGQGGAGPVGGQG 679
>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = -2 Query: 188 DPSALFRPQNTVTWPVFPPAAKAGG--VRNKAATTERRGRRHAGLQ 57 D S P TVT PPA+ GG + TER RH+GLQ Sbjct: 365 DNSPQQAPTPTVTTTGNPPASNTGGTDASPRLNWTERGETRHSGLQ 410
>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = -2 Query: 188 DPSALFRPQNTVTWPVFPPAAKAGG--VRNKAATTERRGRRHAGLQ 57 D S P TVT PPA+ GG + TER RH+GLQ Sbjct: 365 DNSPQQAPTPTVTTTGNPPASNTGGTDASPRLNWTERGETRHSGLQ 410
>GLI1_XENLA (Q91690) Zinc finger protein GLI1 (GLI-1) (Fragment)| Length = 1360 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +1 Query: 259 NGKYHLDLSGHDLSSVGADIKHCQFKGVPVSLS 357 N HL G + + +KHCQ K P+S++ Sbjct: 163 NSHEHLSSRGMSMLQPRSSVKHCQLKSEPLSIT 195
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -2 Query: 146 PVFPPAAKAGGVRNKAATTERRGRRHAGLQGGSG 45 P PPA +G + TER G+ AG GG G Sbjct: 638 PGVPPATMSGSMMGSDMRTERFGQGGAGPVGGQG 671
>E1BL_ADECT (P14266) E1B protein, large T-antigen (Early E1B 55 kDa protein)| Length = 444 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 Query: 310 ADIKHCQFKGVPVSLSIGGYGT 375 A I HC FK S+ +GG GT Sbjct: 265 ASISHCMFKDCTCSIMLGGQGT 286 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,906,083 Number of Sequences: 219361 Number of extensions: 794796 Number of successful extensions: 3364 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3197 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3343 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
