ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet41h06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_187275.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1169 Score = 65.9 bits (33), Expect = 8e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 313 ggacgagcgcgtggtgcaggtgcacagcgcggaggag 349 ||||||||| ||||||||||||||||||||||||||| Sbjct: 320 ggacgagcgggtggtgcaggtgcacagcgcggaggag 356
>emb|AM039890.1| Oryza sativa (japonica cultivar-group) cdsp32 gene for thioredoxin Length = 906 Score = 65.9 bits (33), Expect = 8e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 313 ggacgagcgcgtggtgcaggtgcacagcgcggaggag 349 ||||||||| ||||||||||||||||||||||||||| Sbjct: 210 ggacgagcgggtggtgcaggtgcacagcgcggaggag 246
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 65.9 bits (33), Expect = 8e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 313 ggacgagcgcgtggtgcaggtgcacagcgcggaggag 349 ||||||||| ||||||||||||||||||||||||||| Sbjct: 17215521 ggacgagcgggtggtgcaggtgcacagcgcggaggag 17215557
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0640E12 Length = 167353 Score = 65.9 bits (33), Expect = 8e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 313 ggacgagcgcgtggtgcaggtgcacagcgcggaggag 349 ||||||||| ||||||||||||||||||||||||||| Sbjct: 20646 ggacgagcgggtggtgcaggtgcacagcgcggaggag 20682
>dbj|AK066045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049P20, full insert sequence Length = 1169 Score = 65.9 bits (33), Expect = 8e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 313 ggacgagcgcgtggtgcaggtgcacagcgcggaggag 349 ||||||||| ||||||||||||||||||||||||||| Sbjct: 320 ggacgagcgggtggtgcaggtgcacagcgcggaggag 356
>gb|BC059268.1| Mus musculus zinc finger protein 608, mRNA (cDNA clone IMAGE:6412730) Length = 5102 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 934 tgtgagcggcggcggcagcagcaa 957
>ref|XM_993952.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 2 (Zfp608), mRNA Length = 6628 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 1014 tgtgagcggcggcggcagcagcaa 1037
>ref|XM_993937.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 1 (Zfp608), mRNA Length = 5495 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 970 tgtgagcggcggcggcagcagcaa 993
>ref|XM_993993.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 3 (Zfp608), mRNA Length = 5813 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 970 tgtgagcggcggcggcagcagcaa 993
>ref|XM_994076.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 6 (Zfp608), mRNA Length = 6112 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 1014 tgtgagcggcggcggcagcagcaa 1037
>ref|XM_994057.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 5 (Zfp608), mRNA Length = 6069 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 970 tgtgagcggcggcggcagcagcaa 993
>ref|XM_923365.2| PREDICTED: Mus musculus RIKEN cDNA D430007A19 gene, transcript variant 4 (D430007A19Rik), mRNA Length = 6602 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 1011 tgtgagcggcggcggcagcagcaa 1034
>ref|XM_923363.2| PREDICTED: Mus musculus RIKEN cDNA D430007A19 gene, transcript variant 3 (D430007A19Rik), mRNA Length = 5497 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 970 tgtgagcggcggcggcagcagcaa 993
>ref|XM_979945.1| PREDICTED: Mus musculus RIKEN cDNA D430007A19 gene, transcript variant 7 (D430007A19Rik), mRNA Length = 5814 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 970 tgtgagcggcggcggcagcagcaa 993
>ref|XM_914660.2| PREDICTED: Mus musculus RIKEN cDNA D430007A19 gene, transcript variant 1 (D430007A19Rik), mRNA Length = 6110 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 1011 tgtgagcggcggcggcagcagcaa 1034
>ref|XM_923360.2| PREDICTED: Mus musculus RIKEN cDNA D430007A19 gene, transcript variant 2 (D430007A19Rik), mRNA Length = 6070 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 970 tgtgagcggcggcggcagcagcaa 993
>ref|XM_001000830.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 2 (Zfp608), mRNA Length = 6625 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 1011 tgtgagcggcggcggcagcagcaa 1034
>ref|XM_001000817.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 1 (Zfp608), mRNA Length = 5495 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 970 tgtgagcggcggcggcagcagcaa 993
>ref|XM_001000861.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 4 (Zfp608), mRNA Length = 5813 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 970 tgtgagcggcggcggcagcagcaa 993
>ref|XM_001000847.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 3 (Zfp608), mRNA Length = 4430 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 1011 tgtgagcggcggcggcagcagcaa 1034
>ref|XM_001000874.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 5 (Zfp608), mRNA Length = 4914 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 1011 tgtgagcggcggcggcagcagcaa 1034
>ref|XM_001000914.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 8 (Zfp608), mRNA Length = 6109 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 1011 tgtgagcggcggcggcagcagcaa 1034
>ref|XM_001000902.1| PREDICTED: Mus musculus zinc finger protein 608, transcript variant 7 (Zfp608), mRNA Length = 6069 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 970 tgtgagcggcggcggcagcagcaa 993
>gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome 18, complete sequence Length = 232320 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 14946 tgtgagcggcggcggcagcagcaa 14969
>gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosome 18, complete sequence Length = 184836 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 141838 tgtgagcggcggcggcagcagcaa 141861
>dbj|AK047979.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130026F18 product:hypothetical Glycine-rich region containing protein, full insert sequence Length = 3337 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 972 tgtgagcggcggcggcagcagcaa 995
>gb|BC092219.1| Mus musculus zinc finger protein 608, mRNA (cDNA clone MGC:116601 IMAGE:6830664), complete cds Length = 5937 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 tgtgagcggcggcggcagcagcaa 210 |||||||||||||||||||||||| Sbjct: 744 tgtgagcggcggcggcagcagcaa 767
>gb|BC103913.1| Homo sapiens transcription elongation factor B polypeptide 3C (elongin A3), mRNA (cDNA clone MGC:119353 IMAGE:40006027), complete cds Length = 1642 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 1511 gtgagcggcggcggcagcagcaa 1533
>gb|BC103912.1| Homo sapiens transcription elongation factor B polypeptide 3C (elongin A3), mRNA (cDNA clone IMAGE:40006026), partial cds Length = 1637 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 1506 gtgagcggcggcggcagcagcaa 1528
>ref|NM_145653.2| Homo sapiens transcription elongation factor B polypeptide 3C (elongin A3) (TCEB3C), mRNA Length = 1877 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 1746 gtgagcggcggcggcagcagcaa 1768
>gb|AC162302.2| Mus musculus chromosome 15, clone RP23-463E8, complete sequence Length = 171134 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Minus Query: 31 agcagcagccagtcagcaggagtgctc 57 ||||||||||||||||||| ||||||| Sbjct: 89679 agcagcagccagtcagcagcagtgctc 89653
>ref|XM_929328.1| PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3C (LOC653420), mRNA Length = 1871 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 1740 gtgagcggcggcggcagcagcaa 1762
>ref|XM_929317.1| PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3C (LOC653415), mRNA Length = 1871 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 1740 gtgagcggcggcggcagcagcaa 1762
>gb|AC090373.11| Homo sapiens chromosome 18, clone RP11-776B3, complete sequence Length = 143456 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 7014 gtgagcggcggcggcagcagcaa 7036 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 1087 gtgagcggcggcggcagcagcaa 1109
>gb|AC012254.12| Homo sapiens chromosome 18, clone RP11-49K24, complete sequence Length = 126284 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 123779 gtgagcggcggcggcagcagcaa 123801 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 117864 gtgagcggcggcggcagcagcaa 117886
>gb|AC115763.10| Mus musculus chromosome 15, clone RP23-64J7, complete sequence Length = 243676 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Minus Query: 31 agcagcagccagtcagcaggagtgctc 57 ||||||||||||||||||| ||||||| Sbjct: 11368 agcagcagccagtcagcagcagtgctc 11342
>dbj|AB076840.1| Homo sapiens mRNA for transcription elongation factor Elongin A3, complete cds Length = 1641 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gtgagcggcggcggcagcagcaa 210 ||||||||||||||||||||||| Sbjct: 1510 gtgagcggcggcggcagcagcaa 1532
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaaggt 213 |||||||||||||||||||||| Sbjct: 43815 gcggcggcggcagcagcaaggt 43836
>gb|AC158114.7| Mus musculus chromosome 5, clone RP23-371A16, complete sequence Length = 167040 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaagg 212 |||||||||||||||||||||| Sbjct: 140769 agcggcggcggcagcagcaagg 140790
>ref|XM_977431.1| PREDICTED: Mus musculus similar to CG40351-PA.3 (LOC665515), mRNA Length = 3360 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaagg 212 |||||||||||||||||||||| Sbjct: 93 agcggcggcggcagcagcaagg 114
>ref|NM_079516.2| Drosophila melanogaster Another transcription unit CG1433-RA (Atu), mRNA Length = 2348 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagcaag 211 |||||||||||||||||||||| Sbjct: 2192 gagcggcggcggcagcagcaag 2213
>dbj|AK141316.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430027B02 product:hypothetical RNA-binding region RNP-1 (RNA recognition motif)/Proline-rich region profile/Eukaryotic RNA Recognition Motif (RRM) profile/Alanine-rich region profile containing protein, full insert sequence Length = 3366 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaagg 212 |||||||||||||||||||||| Sbjct: 99 agcggcggcggcagcagcaagg 120
>gb|AY075403.1| Drosophila melanogaster LD30655 full length cDNA Length = 2354 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagcaag 211 |||||||||||||||||||||| Sbjct: 2183 gagcggcggcggcagcagcaag 2204
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaaggt 213 |||||||||||||||||||||| Sbjct: 4072153 gcggcggcggcagcagcaaggt 4072174 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cggcggcggcagcagcaagg 212 |||||||||||||||||||| Sbjct: 2794751 cggcggcggcagcagcaagg 2794770
>gb|AC009538.4|AC009538 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone BACR24O24, complete sequence Length = 173927 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagcaag 211 |||||||||||||||||||||| Sbjct: 160113 gagcggcggcggcagcagcaag 160134
>gb|AC009346.5|AC009346 Drosophila melanogaster, chromosome 3R, region 83A-83B, BAC clone BACR03P13, complete sequence Length = 168448 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagcaag 211 |||||||||||||||||||||| Sbjct: 45103 gagcggcggcggcagcagcaag 45124
>gb|U75467.1|DMU75467 Drosophila melanogaster Rga and Atu genes, complete cds Length = 8741 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagcaag 211 |||||||||||||||||||||| Sbjct: 162 gagcggcggcggcagcagcaag 141
>emb|AJ893522.1| Macrotarsomys ingens partial ar gene for androgen receptor, exon 1 Length = 1386 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaaggt 213 |||||||||||||||||||||| Sbjct: 96 gcggcggcggcagcagcaaggt 117
>gb|AE003602.4| Drosophila melanogaster chromosome 3R, section 6 of 118 of the complete sequence Length = 326091 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagcaag 211 |||||||||||||||||||||| Sbjct: 205174 gagcggcggcggcagcagcaag 205195
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaaggt 213 |||||||||||||||||||||| Sbjct: 4080847 gcggcggcggcagcagcaaggt 4080868 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cggcggcggcagcagcaagg 212 |||||||||||||||||||| Sbjct: 2803782 cggcggcggcagcagcaagg 2803801
>ref|XM_515537.1| PREDICTED: Pan troglodytes similar to N-acetylglucosamine kinase (GlcNAc kinase) (LOC459309), mRNA Length = 1305 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 870 cgccggctccatcgccacagc 890
>gb|BC001029.2| Homo sapiens N-acetylglucosamine kinase, mRNA (cDNA clone MGC:912 IMAGE:3347484), complete cds Length = 1233 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 372 cgccggctccatcgccacagc 392
>ref|XM_653401.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0889.2), mRNA Length = 1668 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 agaaggagaaggccaagtcgggcga 309 ||||||||||||| ||||||||||| Sbjct: 566 agaaggagaaggcgaagtcgggcga 590
>gb|BC036843.1| Homo sapiens N-acetylglucosamine kinase, mRNA (cDNA clone IMAGE:5216991), with apparent retained intron Length = 2860 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 346 cgccggctccatcgccacagc 366
>ref|NM_017567.2| Homo sapiens N-acetylglucosamine kinase (NAGK), mRNA Length = 1535 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 691 cgccggctccatcgccacagc 711
>emb|AL009175.2|HS43C13 Human DNA sequence from clone RP6-43C13 on chromosome Xq21.1-21.3 Contains part of the CHM gene for choroideremia (Rab escort protein 1) and a CpG island, complete sequence Length = 106233 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ctcccccttctctctagcagc 36 ||||||||||||||||||||| Sbjct: 4559 ctcccccttctctctagcagc 4539
>emb|CR457271.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0313D for gene NAGK, N-acetylglucosamine kinase; complete cds, incl. stopcodon Length = 1035 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 324 cgccggctccatcgccacagc 344
>gb|BC005371.1| Homo sapiens N-acetylglucosamine kinase, mRNA (cDNA clone MGC:12486 IMAGE:3932248), complete cds Length = 1233 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 362 cgccggctccatcgccacagc 382
>emb|CR857520.1| Pongo pygmaeus mRNA; cDNA DKFZp459B0222 (from clone DKFZp459B0222) Length = 2365 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 335 cgccggctccatcgccacagc 355
>emb|CR622456.1| full-length cDNA clone CS0DM004YE08 of Fetal liver of Homo sapiens (human) Length = 1133 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 352 cgccggctccatcgccacagc 372
>emb|CR622455.1| full-length cDNA clone CS0CAP007YG04 of Thymus of Homo sapiens (human) Length = 1156 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 341 cgccggctccatcgccacagc 361
>emb|CR615452.1| full-length cDNA clone CS0DE001YJ13 of Placenta of Homo sapiens (human) Length = 1164 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 352 cgccggctccatcgccacagc 372
>dbj|AK097223.1| Homo sapiens cDNA FLJ39904 fis, clone SPLEN2017318, highly similar to Homo sapiens mRNA for N-Acetylglucosamine kinase Length = 2987 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 2148 cgccggctccatcgccacagc 2168
>emb|CR609075.1| full-length cDNA clone CS0DE003YM18 of Placenta of Homo sapiens (human) Length = 1204 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 376 cgccggctccatcgccacagc 396
>emb|CR608802.1| full-length cDNA clone CS0DF032YO19 of Fetal brain of Homo sapiens (human) Length = 1833 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 361 cgccggctccatcgccacagc 381
>emb|CR591536.1| full-length cDNA clone CS0DG007YN22 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1154 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 386 cgccggctccatcgccacagc 406
>dbj|AK001812.1| Homo sapiens cDNA FLJ10950 fis, clone PLACE1000185 Length = 1201 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 359 cgccggctccatcgccacagc 379
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 agaaggccaagtcgggcgacaagga 315 ||||||||||| ||||||||||||| Sbjct: 2260713 agaaggccaaggcgggcgacaagga 2260737
>gb|BC102780.1| Bos taurus N-acetylglucosamine kinase, mRNA (cDNA clone MGC:127109 IMAGE:7943804), complete cds Length = 1271 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 374 cgccggctccatcgccacagc 394
>gb|AY335625.1| Synthetic construct Homo sapiens N-acetylglucosamine kinase (NAGK) mRNA, partial cds Length = 1035 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 324 cgccggctccatcgccacagc 344
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaag 211 ||||||||||||||||||||| Sbjct: 16082855 agcggcggcggcagcagcaag 16082875
>dbj|AK222645.1| Homo sapiens mRNA for N-Acetylglucosamine kinase variant, clone: CBL04288 Length = 1217 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 358 cgccggctccatcgccacagc 378
>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence Length = 196085 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaagg 212 ||||||||||||||||||||| Sbjct: 29417 gcggcggcggcagcagcaagg 29437
>gb|AC007881.4| Homo sapiens BAC clone RP11-467P9 from 2, complete sequence Length = 171247 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 38497 cgccggctccatcgccacagc 38517
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1328_D07 Length = 155007 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaag 211 ||||||||||||||||||||| Sbjct: 83068 agcggcggcggcagcagcaag 83088
>emb|AJ242910.1|HSA242910 Homo sapiens mRNA for N-Acetylglucosamine kinase Length = 1187 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 341 cgccggctccatcgccacagc 361
>emb|AJ893526.1| Mesocricetus auratus partial ar gene for androgen receptor, exon 1 Length = 1383 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaagg 212 ||||||||||||||||||||| Sbjct: 120 gcggcggcggcagcagcaagg 140
>emb|AL805963.23| Mouse DNA sequence from clone RP23-98K7 on chromosome X, complete sequence Length = 233546 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ccttcctcccccttctctcta 31 ||||||||||||||||||||| Sbjct: 21333 ccttcctcccccttctctcta 21353
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 291 agaaggccaagtcgggcgacaaggacgagcgcg 323 ||||||||||| | ||||||||||||| ||||| Sbjct: 4386659 agaaggccaaggccggcgacaaggacgcgcgcg 4386627
>ref|NM_001034314.1| Bos taurus N-acetylglucosamine kinase (NAGK), mRNA Length = 1271 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 374 cgccggctccatcgccacagc 394
>emb|AL832837.1|HSM804148 Homo sapiens mRNA; cDNA DKFZp667A0125 (from clone DKFZp667A0125) Length = 4420 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccggctccatcgccacagc 168 ||||||||||||||||||||| Sbjct: 2840 cgccggctccatcgccacagc 2860
>gb|AF494280.1| Homo sapiens GC-binding transcription factor Sp3 gene, partial cds Length = 9596 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcggcggcggcagcagcaagg 212 ||||||||||||||||||||| Sbjct: 582 gcggcggcggcagcagcaagg 562
>ref|NM_188507.1| Oryza sativa (japonica cultivar-group), Ozsa8176 predicted mRNA Length = 717 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 201 gagcggcggcggcagcagca 182
>ref|XM_465582.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2019 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 215 gagcggcggcggcagcagca 234
>ref|XM_506802.1| PREDICTED Oryza sativa (japonica cultivar-group), P0403C01.30 mRNA Length = 2156 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 318 gagcggcggcggcagcagca 337
>ref|NM_021599.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 2 (ADAMTS2), transcript variant 2, mRNA Length = 1701 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 81 gagcggcggcggcagcagca 62
>ref|NM_014244.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 2 (ADAMTS2), transcript variant 1, mRNA Length = 3636 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 81 gagcggcggcggcagcagca 62
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tgagcggcggcggcagcagc 208 |||||||||||||||||||| Sbjct: 1158263 tgagcggcggcggcagcagc 1158282
>gb|AY376477.1| Pan paniscus mitochondrial DNA polymerase (POLG) gene, POLG-L allele, partial cds Length = 90 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 14 agcggcggcggcagcagcaa 33
>gb|AY376476.1| Pan paniscus mitochondrial DNA polymerase (POLG) gene, POLG-K allele, partial cds Length = 99 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 14 agcggcggcggcagcagcaa 33
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cggcggcggcagcagcaagg 212 |||||||||||||||||||| Sbjct: 74558 cggcggcggcagcagcaagg 74577
>gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete sequence Length = 160827 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 97481 agcggcggcggcagcagcaa 97462
>ref|XM_581038.2| PREDICTED: Bos taurus similar to Afadin (Af-6 protein) (LOC504856), mRNA Length = 5241 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 4615 gagcggcggcggcagcagca 4634
>ref|XM_369539.1| Magnaporthe grisea 70-15 chromosome III predicted protein (MG05925.4) partial mRNA Length = 576 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 400 agcggcggcggcagcagcaa 419
>ref|XM_960375.1| Neurospora crassa OR74A hypothetical protein (NCU02695.1) partial mRNA Length = 975 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tgagcggcggcggcagcagc 208 |||||||||||||||||||| Sbjct: 962 tgagcggcggcggcagcagc 943
>ref|XM_600204.2| PREDICTED: Bos taurus similar to potassium channel, subfamily K, member 12 (LOC521931), mRNA Length = 2867 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 tgtgagcggcggcggcagcagcaa 210 ||||||||||||| |||||||||| Sbjct: 1532 tgtgagcggcggcagcagcagcaa 1509
>ref|XM_331893.1| Neurospora crassa OR74A hypothetical protein (NCU02695.1) partial mRNA Length = 975 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tgagcggcggcggcagcagc 208 |||||||||||||||||||| Sbjct: 962 tgagcggcggcggcagcagc 943
>gb|AC166993.4| Mus musculus BAC clone RP23-467D18 from chromosome 17, complete sequence Length = 199776 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ccttcctcccccttctctct 30 |||||||||||||||||||| Sbjct: 38254 ccttcctcccccttctctct 38235
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaag 211 |||||||||||||||||||| Sbjct: 9571367 gcggcggcggcagcagcaag 9571386 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 tgagcggcggcggcagcagcaagg 212 |||||||||||||||| ||||||| Sbjct: 7942058 tgagcggcggcggcagtagcaagg 7942035 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tggtgcaggtgcacagcgcg 343 |||||||||||||||||||| Sbjct: 7786442 tggtgcaggtgcacagcgcg 7786461 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 6966591 agcggcggcggcagcagcaa 6966572
>ref|XM_544986.2| PREDICTED: Canis familiaris similar to Atonal protein homolog 1 (Helix-loop-helix protein hATH-1) (LOC487864), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaag 211 |||||||||||||||||||| Sbjct: 338 gcggcggcggcagcagcaag 357
>ref|XM_755047.1| Ustilago maydis 521 hypothetical protein (UM03993.1) partial mRNA Length = 3675 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 1861 gagcggcggcggcagcagca 1880
>ref|XM_572918.1| Cryptococcus neoformans var. neoformans JEC21 40S ribosomal protein S0 (CNI04340) partial mRNA Length = 1619 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tgagcggcggcggcagcagc 208 |||||||||||||||||||| Sbjct: 790 tgagcggcggcggcagcagc 771
>ref|XM_538574.2| PREDICTED: Canis familiaris similar to ADAMTS-2 precursor (A disintegrin and metalloproteinase with thrombospondin motifs 2) (ADAM-TS 2) (ADAM-TS2) (Procollagen I/II amino-propeptide processing enzyme) (Procollagen I N-proteinase) (PC I-NP) (Procollagen N-endopeptidase) (pNPI..., transcript variant 2 (LOC481453), mRNA Length = 3282 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 75 gagcggcggcggcagcagca 56
>ref|XM_843844.1| PREDICTED: Canis familiaris similar to ADAMTS-2 precursor (A disintegrin and metalloproteinase with thrombospondin motifs 2) (ADAM-TS 2) (ADAM-TS2) (Procollagen I/II amino-propeptide processing enzyme) (Procollagen I N-proteinase) (PC I-NP) (Procollagen N-endopeptidase) (pNPI..., transcript variant 3 (LOC481453), mRNA Length = 3645 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 75 gagcggcggcggcagcagca 56
>gb|AC125279.1| Mus musculus BAC clone RP23-433F5 from 8, complete sequence Length = 201197 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 84686 gagcggcggcggcagcagca 84705
>gb|AC119805.6| Mus musculus chromosome 16, clone RP23-144H22, complete sequence Length = 215566 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cttcaagccttcctccccct 23 |||||||||||||||||||| Sbjct: 171184 cttcaagccttcctccccct 171165
>gb|AC165082.2| Mus musculus BAC clone RP23-412H17 from chromosome 17, complete sequence Length = 196132 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ccttcctcccccttctctct 30 |||||||||||||||||||| Sbjct: 67968 ccttcctcccccttctctct 67987
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 296142 agcggcggcggcagcagcaa 296161
>gb|AC109479.3| Homo sapiens chromosome 5 clone RP11-443C10, complete sequence Length = 183734 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 72751 gagcggcggcggcagcagca 72732
>gb|BC002138.1| Mus musculus abhydrolase domain containing 12, mRNA (cDNA clone IMAGE:3484538), partial cds Length = 1955 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 179 gtgacgcctgtgagcggcggcggcagcagcaaggtc 214 |||||| ||||||||||||||| | ||||| ||||| Sbjct: 59 gtgacggctgtgagcggcggcgactgcagcgaggtc 94
>emb|AL354676.10| Human DNA sequence from clone RP11-48L13 on chromosome 9 Conatins a pseudogene similar to part of non-metastatic cells 4, protein expressed in (NME4), complete sequence Length = 72040 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ccttcctcccccttctctct 30 |||||||||||||||||||| Sbjct: 11989 ccttcctcccccttctctct 12008
>emb|AL161913.11| Human DNA sequence from clone RP11-64P11 on chromosome 9, complete sequence Length = 137897 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ccttcctcccccttctctct 30 |||||||||||||||||||| Sbjct: 106191 ccttcctcccccttctctct 106172
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgagcgcgtggtgcaggtgc 335 |||||||||||||||||||| Sbjct: 3023592 cgagcgcgtggtgcaggtgc 3023573
>emb|BX842635.1| Neurospora crassa DNA linkage group I BAC contig B12J7 Length = 94169 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tgagcggcggcggcagcagc 208 |||||||||||||||||||| Sbjct: 67508 tgagcggcggcggcagcagc 67489
>emb|AJ003125.1|HSAJ3125 Homo sapiens mRNA for procollagen I-N proteinase Length = 3636 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 81 gagcggcggcggcagcagca 62
>emb|AL683883.26| Mouse DNA sequence from clone RP23-361B8 on chromosome X, complete sequence Length = 190863 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ccttcctcccccttctctct 30 |||||||||||||||||||| Sbjct: 37163 ccttcctcccccttctctct 37144
>emb|AL808125.11| Mouse DNA sequence from clone RP23-193L22 on chromosome 2, complete sequence Length = 236619 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 gtgacgcctgtgagcggcggcggcagcagcaaggtc 214 |||||| ||||||||||||||| | ||||| ||||| Sbjct: 71508 gtgacggctgtgagcggcggcgactgcagcgaggtc 71473
>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160440 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 70871 agcggcggcggcagcagcaa 70852
>gb|AY119139.1| Drosophila melanogaster RE41430 full insert cDNA Length = 3772 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 1048 agcggcggcggcagcagcaa 1029
>gb|AC104625.2| Drosophila melanogaster X BAC RP98-48G8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172105 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 58949 agcggcggcggcagcagcaa 58930
>gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153733 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 101443 agcggcggcggcagcagcaa 101424
>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187921 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 6065 agcggcggcggcagcagcaa 6046
>gb|DQ378280.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 43O10, complete sequence Length = 40809 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 8213 agcggcggcggcagcagcaa 8232
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 115774 agcggcggcggcagcagcaa 115793
>ref|NM_167335.1| Drosophila melanogaster Smrter CG4013-RC, transcript variant C (Smr), mRNA Length = 13475 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 4850 agcggcggcggcagcagcaa 4869
>ref|NM_167334.1| Drosophila melanogaster Smrter CG4013-RB, transcript variant B (Smr), mRNA Length = 12702 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 4077 agcggcggcggcagcagcaa 4096
>dbj|AP003603.1| Nostoc sp. PCC 7120 plasmid pCC7120gamma DNA, complete sequence Length = 101965 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tctctctagcagcagccagt 43 |||||||||||||||||||| Sbjct: 67189 tctctctagcagcagccagt 67208
>ref|NM_132581.1| Drosophila melanogaster CG11138-RC, transcript variant C (CG11138), mRNA Length = 3756 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 1049 agcggcggcggcagcagcaa 1030
>gb|AC008544.7| Homo sapiens chromosome 5 clone CTC-500G13, complete sequence Length = 168008 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 6274 gagcggcggcggcagcagca 6255
>ref|NM_080536.2| Drosophila melanogaster Smrter CG4013-RA, transcript variant A (Smr), mRNA Length = 12622 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 3997 agcggcggcggcagcagcaa 4016
>dbj|AK160126.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500011G07 product:hypothetical Esterase/lipase/thioesterase containing protein, full insert sequence Length = 1971 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 179 gtgacgcctgtgagcggcggcggcagcagcaaggtc 214 |||||| ||||||||||||||| | ||||| ||||| Sbjct: 91 gtgacggctgtgagcggcggcgactgcagcgaggtc 126
>dbj|AK158885.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430357H14 product:cerebellin 1 precursor protein, full insert sequence Length = 2344 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 61 gagcggcggcggcagcagca 80
>dbj|AK158818.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430334L12 product:cerebellin 1 precursor protein, full insert sequence Length = 2328 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 44 gagcggcggcggcagcagca 63
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 5426537 gagcggcggcggcagcagca 5426518
>dbj|AK018261.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330583M11 product:hypothetical Esterase/lipase/thioesterase family active site containing protein, full insert sequence Length = 1337 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 179 gtgacgcctgtgagcggcggcggcagcagcaaggtc 214 |||||| ||||||||||||||| | ||||| ||||| Sbjct: 23 gtgacggctgtgagcggcggcgactgcagcgaggtc 58
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 331900 agcggcggcggcagcagcaa 331881
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaag 211 |||||||||||||||||||| Sbjct: 9569488 gcggcggcggcagcagcaag 9569507 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 tgagcggcggcggcagcagcaagg 212 |||||||||||||||| ||||||| Sbjct: 7939893 tgagcggcggcggcagtagcaagg 7939870 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tggtgcaggtgcacagcgcg 343 |||||||||||||||||||| Sbjct: 7784277 tggtgcaggtgcacagcgcg 7784296 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 6964486 agcggcggcggcagcagcaa 6964467
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 16113749 gagcggcggcggcagcagca 16113730
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 6652409 gagcggcggcggcagcagca 6652390
>gb|AC079340.8| Homo sapiens BAC clone RP11-18H21 from 4, complete sequence Length = 186836 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ccttcctcccccttctctct 30 |||||||||||||||||||| Sbjct: 29025 ccttcctcccccttctctct 29006
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 tgagcggcggcggcagcagcaagg 212 |||||||||||||||| ||||||| Sbjct: 9421 tgagcggcggcggcagtagcaagg 9398
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 tgagcggcggcggcagcagcaagg 212 |||||||||||||||| ||||||| Sbjct: 127656 tgagcggcggcggcagtagcaagg 127633
>ref|XM_213548.3| PREDICTED: Rattus norvegicus similar to A disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 2 (LOC287899), mRNA Length = 3737 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gcggcggcggcagcagcaag 211 |||||||||||||||||||| Sbjct: 179 gcggcggcggcagcagcaag 160
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence Length = 131709 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gcggcggcggcagcagcaag 211 |||||||||||||||||||| Sbjct: 41319 gcggcggcggcagcagcaag 41300
>ref|XM_345190.2| PREDICTED: Rattus norvegicus basic helix-loop-helix domain containing, class B5 (predicted) (Bhlhb5_predicted), mRNA Length = 2997 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaag 211 |||||||||||||||||||| Sbjct: 867 gcggcggcggcagcagcaag 886
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 133188 agcggcggcggcagcagcaa 133169
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 4561 gagcggcggcggcagcagca 4542
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 132580 gagcggcggcggcagcagca 132561
>dbj|AP005065.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0046H03 Length = 137020 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 6078 gagcggcggcggcagcagca 6059
>dbj|AP004787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0403C01 Length = 145635 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 111983 gagcggcggcggcagcagca 111964
>dbj|AK120927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P10, full insert sequence Length = 2155 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 317 gagcggcggcggcagcagca 336
>dbj|AK120615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151P21, full insert sequence Length = 2019 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 215 gagcggcggcggcagcagca 234
>dbj|AK110597.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G01, full insert sequence Length = 1311 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaag 211 |||||||||||||||||||| Sbjct: 18 gcggcggcggcagcagcaag 37
>dbj|AK106306.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C10, full insert sequence Length = 2510 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 188 agcggcggcggcagcagcaa 207
>gb|AF175223.1|AF175223 Drosophila melanogaster SANT domain protein SMRTER (Smrter) mRNA, complete cds Length = 11296 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 3369 agcggcggcggcagcagcaa 3388
>dbj|AK067601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108O03, full insert sequence Length = 1009 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaag 211 |||||||||||||||||||| Sbjct: 295 gcggcggcggcagcagcaag 314
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgagcgcgtggtgcaggtgc 335 |||||||||||||||||||| Sbjct: 2673948 cgagcgcgtggtgcaggtgc 2673929
>dbj|AK063996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E12, full insert sequence Length = 2143 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagcggcggcggcagcagca 209 |||||||||||||||||||| Sbjct: 262 gagcggcggcggcagcagca 243
>dbj|AK060074.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B05, full insert sequence Length = 992 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggcggcggcagcagcaag 211 |||||||||||||||||||| Sbjct: 274 gcggcggcggcagcagcaag 293
>gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42 of 73 of the complete sequence Length = 260367 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 123736 agcggcggcggcagcagcaa 123717
>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete sequence Length = 302665 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 87992 agcggcggcggcagcagcaa 87973
>gb|AE003489.2| Drosophila melanogaster chromosome X, section 41 of 74 of the complete sequence Length = 291799 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 249918 agcggcggcggcagcagcaa 249937
>gb|AY610103.1| Sus scrofa clone Clu_7114.scr.msk.p1.Contig2, mRNA sequence Length = 1184 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gccggctccatcgccacagc 168 |||||||||||||||||||| Sbjct: 344 gccggctccatcgccacagc 363
>gb|AC004248.1|AC004248 Drosophila melanogaster (P1 DS03910 (D165)) DNA sequence, complete sequence Length = 77409 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 65029 agcggcggcggcagcagcaa 65048
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 tggtgcaggtgcacagcgcg 343 |||||||||||||||||||| Sbjct: 67690 tggtgcaggtgcacagcgcg 67671
>emb|AJ418842.1|DVI418842 Drosophila virilis Ubx promoter Length = 611 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcggcggcggcagcagcaa 210 |||||||||||||||||||| Sbjct: 421 agcggcggcggcagcagcaa 402 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,690,304 Number of Sequences: 3902068 Number of extensions: 2690304 Number of successful extensions: 77771 Number of sequences better than 10.0: 166 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76808 Number of HSP's gapped (non-prelim): 961 length of query: 350 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 328 effective length of database: 17,147,199,772 effective search space: 5624281525216 effective search space used: 5624281525216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
