| Clone Name | baet41g11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C16, full insert sequence Length = 1533 Score = 490 bits (247), Expect = e-135 Identities = 385/431 (89%) Strand = Plus / Plus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 ||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 110 tggagaaggagccttactggccatttgagaagctgcggatctcgattacgggagctggcg 169 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| || |||||||| || | |||||||||| ||||||| ||||||||||| || | Sbjct: 170 ggttcatcgcatcccacatcgcgaggcgcctcaagagcgagggccactacatcattgctt 229 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 ||||||||||||| || || |||||| ||||||||||||||||||||||| || |||| Sbjct: 230 ctgactggaagaaaaatgagcacatgactgaggatatgttctgccatgagttccatcttg 289 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 |||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 290 ttgatttgagggtgatggacaactgcctcaaggtgaccaccggggttgaccatgttttca 349 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || |||||||||||||||||||| ||||| || ||||| || ||||| ||||||| Sbjct: 350 accttgccgctgatatgggagggatgggattcattcaatccaatcactctgttatcatgt 409 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||||||||||||||||||||| | ||| || ||||||||||| | Sbjct: 410 acaacaacaccatgatcagctttaacatgcttgaggccgctaggattaatggtgtcaaaa 469 Query: 374 ggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgtag 433 ||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 470 ggttcttttatgcttcaagtgcttgtatctaccctgaatttaagcagctggacactgtag 529 Query: 434 ttagcttgaag 444 ||||||||||| Sbjct: 530 ttagcttgaag 540
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 387 bits (195), Expect = e-104 Identities = 321/363 (88%) Strand = Plus / Minus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 ||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 133137 tggagaaggagccttactggccatttgagaagctgcggatctcgattacgggagctggcg 133078 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| || |||||||| || | |||||||||| ||||||| ||||||||||| || | Sbjct: 133077 ggttcatcgcatcccacatcgcgaggcgcctcaagagcgagggccactacatcattgctt 133018 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 ||||||||||||| || || |||||| ||||||||||||||||||||||| || |||| Sbjct: 133017 ctgactggaagaaaaatgagcacatgactgaggatatgttctgccatgagttccatcttg 132958 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 |||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 132957 ttgatttgagggtgatggacaactgcctcaaggtgaccaccggggttgaccatgttttca 132898 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || |||||||||||||||||||| ||||| || ||||| || ||||| ||||||| Sbjct: 132897 accttgccgctgatatgggagggatgggattcattcaatccaatcactctgttatcatgt 132838 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||||||||||||||||||||| | ||| || ||||||||||| | Sbjct: 132837 acaacaacaccatgatcagctttaacatgcttgaggccgctaggattaatggtgtcaaaa 132778 Query: 374 ggt 376 ||| Sbjct: 132777 ggt 132775 Score = 117 bits (59), Expect = 3e-23 Identities = 71/75 (94%) Strand = Plus / Minus Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgta 432 |||||||||||||| || |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 131613 aggttcttttatgcttcaagtgcttgtatctaccctgaatttaagcagctggacactgta 131554 Query: 433 gttagcttgaaggag 447 ||||||||||||||| Sbjct: 131553 gttagcttgaaggag 131539
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 387 bits (195), Expect = e-104 Identities = 321/363 (88%) Strand = Plus / Minus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 ||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 21609618 tggagaaggagccttactggccatttgagaagctgcggatctcgattacgggagctggcg 21609559 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| || |||||||| || | |||||||||| ||||||| ||||||||||| || | Sbjct: 21609558 ggttcatcgcatcccacatcgcgaggcgcctcaagagcgagggccactacatcattgctt 21609499 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 ||||||||||||| || || |||||| ||||||||||||||||||||||| || |||| Sbjct: 21609498 ctgactggaagaaaaatgagcacatgactgaggatatgttctgccatgagttccatcttg 21609439 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 |||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 21609438 ttgatttgagggtgatggacaactgcctcaaggtgaccaccggggttgaccatgttttca 21609379 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || |||||||||||||||||||| ||||| || ||||| || ||||| ||||||| Sbjct: 21609378 accttgccgctgatatgggagggatgggattcattcaatccaatcactctgttatcatgt 21609319 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||||||||||||||||||||| | ||| || ||||||||||| | Sbjct: 21609318 acaacaacaccatgatcagctttaacatgcttgaggccgctaggattaatggtgtcaaaa 21609259 Query: 374 ggt 376 ||| Sbjct: 21609258 ggt 21609256 Score = 117 bits (59), Expect = 3e-23 Identities = 71/75 (94%) Strand = Plus / Minus Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgta 432 |||||||||||||| || |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 21608094 aggttcttttatgcttcaagtgcttgtatctaccctgaatttaagcagctggacactgta 21608035 Query: 433 gttagcttgaaggag 447 ||||||||||||||| Sbjct: 21608034 gttagcttgaaggag 21608020
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 387 bits (195), Expect = e-104 Identities = 321/363 (88%) Strand = Plus / Minus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 ||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 21919817 tggagaaggagccttactggccatttgagaagctgcggatctcgattacgggagctggcg 21919758 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| || |||||||| || | |||||||||| ||||||| ||||||||||| || | Sbjct: 21919757 ggttcatcgcatcccacatcgcgaggcgcctcaagagcgagggccactacatcattgctt 21919698 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 ||||||||||||| || || |||||| ||||||||||||||||||||||| || |||| Sbjct: 21919697 ctgactggaagaaaaatgagcacatgactgaggatatgttctgccatgagttccatcttg 21919638 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 |||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 21919637 ttgatttgagggtgatggacaactgcctcaaggtgaccaccggggttgaccatgttttca 21919578 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || |||||||||||||||||||| ||||| || ||||| || ||||| ||||||| Sbjct: 21919577 accttgccgctgatatgggagggatgggattcattcaatccaatcactctgttatcatgt 21919518 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||||||||||||||||||||| | ||| || ||||||||||| | Sbjct: 21919517 acaacaacaccatgatcagctttaacatgcttgaggccgctaggattaatggtgtcaaaa 21919458 Query: 374 ggt 376 ||| Sbjct: 21919457 ggt 21919455 Score = 117 bits (59), Expect = 3e-23 Identities = 71/75 (94%) Strand = Plus / Minus Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgta 432 |||||||||||||| || |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 21918293 aggttcttttatgcttcaagtgcttgtatctaccctgaatttaagcagctggacactgta 21918234 Query: 433 gttagcttgaaggag 447 ||||||||||||||| Sbjct: 21918233 gttagcttgaaggag 21918219
>dbj|AK069385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012D14, full insert sequence Length = 1592 Score = 327 bits (165), Expect = 2e-86 Identities = 366/433 (84%) Strand = Plus / Plus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 |||||| ||||| ||| ||||| | ||||||||| |||| ||||| || |||||||| | Sbjct: 182 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 241 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| | ||||||||||| || || ||| |||||||||| ||||||||||||| Sbjct: 242 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 301 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 | |||||||||||||| || |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 302 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 361 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 ||| || |||||||||||||||||||||||||| |||| || || |||||||| |||| Sbjct: 362 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 421 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || ||||||||||| || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 422 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 481 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||| || |||||||| ||||||| | ||||||||||| |||| Sbjct: 482 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 541 Query: 374 ggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgtag 433 ||||||| |||||||| ||||| ||||| ||||||||||| |||||||| ||||||| | Sbjct: 542 ggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactgacg 601 Query: 434 ttagcttgaagga 446 ||||| ||||||| Sbjct: 602 ttagcctgaagga 614
>ref|NM_196510.1| Oryza sativa (japonica cultivar-group) putative epimerase/dehydratase (OSJNBa0061K21.15), mRNA Length = 1137 Score = 319 bits (161), Expect = 4e-84 Identities = 365/433 (84%) Strand = Plus / Plus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 |||||| ||||| ||| ||||| | ||||||||| |||| ||||| || |||||||| | Sbjct: 56 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 115 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| | ||||||||||| || || ||| |||||||||| ||||||||||||| Sbjct: 116 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 175 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 | |||||||||||||| || |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 176 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 235 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 ||| || |||||||||||||||||||||||||| |||| || || |||||||| |||| Sbjct: 236 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 295 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || ||||||||||| || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 296 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 355 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||| || |||||||| ||||||| | ||||||||||| |||| Sbjct: 356 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 415 Query: 374 ggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgtag 433 ||||||| |||||||| ||||| ||||| ||||||||||| |||||||| |||||| | Sbjct: 416 ggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaacg 475 Query: 434 ttagcttgaagga 446 ||||| ||||||| Sbjct: 476 ttagcctgaagga 488
>dbj|AB193582.1| Oryza sativa (japonica cultivar-group) OsGME-1 mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1212 Score = 319 bits (161), Expect = 4e-84 Identities = 365/433 (84%) Strand = Plus / Plus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 |||||| ||||| ||| ||||| | ||||||||| |||| ||||| || |||||||| | Sbjct: 92 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 151 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| | ||||||||||| || || ||| |||||||||| ||||||||||||| Sbjct: 152 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 211 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 | |||||||||||||| || |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 212 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 271 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 ||| || |||||||||||||||||||||||||| |||| || || |||||||| |||| Sbjct: 272 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 331 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || ||||||||||| || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 332 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 391 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||| || |||||||| ||||||| | ||||||||||| |||| Sbjct: 392 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 451 Query: 374 ggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgtag 433 ||||||| |||||||| ||||| ||||| ||||||||||| |||||||| |||||| | Sbjct: 452 ggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaacg 511 Query: 434 ttagcttgaagga 446 ||||| ||||||| Sbjct: 512 ttagcctgaagga 524
>dbj|AK104822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B04, full insert sequence Length = 1587 Score = 319 bits (161), Expect = 4e-84 Identities = 365/433 (84%) Strand = Plus / Plus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 |||||| ||||| ||| ||||| | ||||||||| |||| ||||| || |||||||| | Sbjct: 177 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 236 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| | ||||||||||| || || ||| |||||||||| ||||||||||||| Sbjct: 237 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 296 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 | |||||||||||||| || |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 297 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 356 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 ||| || |||||||||||||||||||||||||| |||| || || |||||||| |||| Sbjct: 357 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 416 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || ||||||||||| || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 417 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 476 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||| || |||||||| ||||||| | ||||||||||| |||| Sbjct: 477 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 536 Query: 374 ggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgtag 433 ||||||| |||||||| ||||| ||||| ||||||||||| |||||||| |||||| | Sbjct: 537 ggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaacg 596 Query: 434 ttagcttgaagga 446 ||||| ||||||| Sbjct: 597 ttagcctgaagga 609
>gb|BT016578.1| Zea mays clone Contig411 mRNA sequence Length = 1538 Score = 291 bits (147), Expect = 1e-75 Identities = 324/383 (84%) Strand = Plus / Plus Query: 40 gagaagctgcggatctcgattacaggagctggcggcttcatagcctcccacattgcaaag 99 ||||||||| |||| |||||||| || ||||| || ||||| | ||||||||||| Sbjct: 199 gagaagctgaggatttcgattactggggctggtggtttcattggatcccacattgctcgc 258 Query: 100 cgcctcaagggcgaggggcactacatcatcgcctctgactggaagaagaacgaacacatg 159 || || ||| |||||| || |||||||| ||||||||||||||||||||||| |||||| Sbjct: 259 cgtctgaagaacgagggccattacatcattgcctctgactggaagaagaacgagcacatg 318 Query: 160 gaagaggatatgttctgccatgagtttcaccttgctgatctgagggtcatggacaactgc 219 ||||| ||||||||||||||||| ||||| | |||||| ||||||||||||||||| Sbjct: 319 accgaggacatgttctgccatgagttccacctcgttgatctcagggtcatggacaactgt 378 Query: 220 ctcaaggtaaccactggggttgaccatgttttcaatctggcagctgatatgggagggatg 279 |||||||| ||| ||| || |||||||| |||||||| || || |||||||| || ||| Sbjct: 379 ctcaaggtcacccatggtgtcgaccatgtcttcaatcttgctgcagatatgggtggcatg 438 Query: 280 ggcttcatccagtccaaccattctgtcatcatgtacaacaacactatgatcagctttaac 339 || ||||||||||| || || ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 439 gggttcatccagtcaaatcactctgtgatcatgtacaacaacaccatgatcagttttaac 498 Query: 340 atgcttgaggctggtagaatcaatggtgtcaagaggttcttttatgcctcgagtgcttgc 399 ||||| ||||||| | ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 499 atgctggaggctgcacgtatcaatggtgtgaagaggttcttctatgcctcgagtgcatgc 558 Query: 400 atctaccctgaatttaagcagct 422 || |||||||| || |||||||| Sbjct: 559 atttaccctgagttcaagcagct 581
>gb|AY104279.1| Zea mays PCO103545 mRNA sequence Length = 1547 Score = 291 bits (147), Expect = 1e-75 Identities = 324/383 (84%) Strand = Plus / Plus Query: 40 gagaagctgcggatctcgattacaggagctggcggcttcatagcctcccacattgcaaag 99 ||||||||| |||| |||||||| || ||||| || ||||| | ||||||||||| Sbjct: 201 gagaagctgaggatttcgattactggggctggtggtttcattggatcccacattgctcgc 260 Query: 100 cgcctcaagggcgaggggcactacatcatcgcctctgactggaagaagaacgaacacatg 159 || || ||| |||||| || |||||||| ||||||||||||||||||||||| |||||| Sbjct: 261 cgtctgaagaacgagggccattacatcattgcctctgactggaagaagaacgagcacatg 320 Query: 160 gaagaggatatgttctgccatgagtttcaccttgctgatctgagggtcatggacaactgc 219 ||||| ||||||||||||||||| ||||| | |||||| ||||||||||||||||| Sbjct: 321 accgaggacatgttctgccatgagttccacctcgttgatctcagggtcatggacaactgt 380 Query: 220 ctcaaggtaaccactggggttgaccatgttttcaatctggcagctgatatgggagggatg 279 |||||||| ||| ||| || |||||||| |||||||| || || |||||||| || ||| Sbjct: 381 ctcaaggtcacccatggtgtcgaccatgtcttcaatcttgctgcagatatgggtggcatg 440 Query: 280 ggcttcatccagtccaaccattctgtcatcatgtacaacaacactatgatcagctttaac 339 || ||||||||||| || || ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 441 gggttcatccagtcaaatcactctgtgatcatgtacaacaacaccatgatcagttttaac 500 Query: 340 atgcttgaggctggtagaatcaatggtgtcaagaggttcttttatgcctcgagtgcttgc 399 ||||| ||||||| | ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 501 atgctggaggctgcacgtatcaatggtgtgaagaggttcttctatgcctcgagtgcatgc 560 Query: 400 atctaccctgaatttaagcagct 422 || |||||||| || |||||||| Sbjct: 561 atttaccctgagttcaagcagct 583
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 260 bits (131), Expect = 3e-66 Identities = 305/363 (84%) Strand = Plus / Plus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 |||||| ||||| ||| ||||| | ||||||||| |||| ||||| || |||||||| | Sbjct: 66893 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 66952 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| | ||||||||||| || || ||| |||||||||| ||||||||||||| Sbjct: 66953 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 67012 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 | |||||||||||||| || |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 67013 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 67072 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 ||| || |||||||||||||||||||||||||| |||| || || |||||||| |||| Sbjct: 67073 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 67132 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || ||||||||||| || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 67133 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 67192 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||| || |||||||| ||||||| | ||||||||||| |||| Sbjct: 67193 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 67252 Query: 374 ggt 376 ||| Sbjct: 67253 ggt 67255 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgta 432 |||||||| |||||||| ||||| ||||| ||||||||||| |||||||| |||||| Sbjct: 67359 aggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaac 67418 Query: 433 gttagcttgaagga 446 |||||| ||||||| Sbjct: 67419 gttagcctgaagga 67432
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 260 bits (131), Expect = 3e-66 Identities = 305/363 (84%) Strand = Plus / Plus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 |||||| ||||| ||| ||||| | ||||||||| |||| ||||| || |||||||| | Sbjct: 14127255 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 14127314 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| | ||||||||||| || || ||| |||||||||| ||||||||||||| Sbjct: 14127315 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 14127374 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 | |||||||||||||| || |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 14127375 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 14127434 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 ||| || |||||||||||||||||||||||||| |||| || || |||||||| |||| Sbjct: 14127435 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 14127494 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || ||||||||||| || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 14127495 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 14127554 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||| || |||||||| ||||||| | ||||||||||| |||| Sbjct: 14127555 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 14127614 Query: 374 ggt 376 ||| Sbjct: 14127615 ggt 14127617 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgta 432 |||||||| |||||||| ||||| ||||| ||||||||||| |||||||| |||||| Sbjct: 14127721 aggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaac 14127780 Query: 433 gttagcttgaagga 446 |||||| ||||||| Sbjct: 14127781 gttagcctgaagga 14127794
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 260 bits (131), Expect = 3e-66 Identities = 305/363 (84%) Strand = Plus / Plus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 |||||| ||||| ||| ||||| | ||||||||| |||| ||||| || |||||||| | Sbjct: 143384 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 143443 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| | ||||||||||| || || ||| |||||||||| ||||||||||||| Sbjct: 143444 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 143503 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 | |||||||||||||| || |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 143504 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 143563 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 ||| || |||||||||||||||||||||||||| |||| || || |||||||| |||| Sbjct: 143564 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 143623 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || ||||||||||| || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 143624 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 143683 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||| || |||||||| ||||||| | ||||||||||| |||| Sbjct: 143684 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 143743 Query: 374 ggt 376 ||| Sbjct: 143744 ggt 143746 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgta 432 |||||||| |||||||| ||||| ||||| ||||||||||| |||||||| |||||| Sbjct: 143850 aggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaac 143909 Query: 433 gttagcttgaagga 446 |||||| ||||||| Sbjct: 143910 gttagcctgaagga 143923
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 260 bits (131), Expect = 3e-66 Identities = 305/363 (84%) Strand = Plus / Plus Query: 14 tggagaaggagccgtattggccattcgagaagctgcggatctcgattacaggagctggcg 73 |||||| ||||| ||| ||||| | ||||||||| |||| ||||| || |||||||| | Sbjct: 14135497 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 14135556 Query: 74 gcttcatagcctcccacattgcaaagcgcctcaagggcgaggggcactacatcatcgcct 133 | ||||| | ||||||||||| || || ||| |||||||||| ||||||||||||| Sbjct: 14135557 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 14135616 Query: 134 ctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcaccttg 193 | |||||||||||||| || |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 14135617 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 14135676 Query: 194 ctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttca 253 ||| || |||||||||||||||||||||||||| |||| || || |||||||| |||| Sbjct: 14135677 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 14135736 Query: 254 atctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatgt 313 | || || ||||||||||| || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 14135737 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 14135796 Query: 314 acaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaaga 373 |||||||||| |||||||| || |||||||| ||||||| | ||||||||||| |||| Sbjct: 14135797 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 14135856 Query: 374 ggt 376 ||| Sbjct: 14135857 ggt 14135859 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctggaaactgta 432 |||||||| |||||||| ||||| ||||| ||||||||||| |||||||| |||||| Sbjct: 14135963 aggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaac 14136022 Query: 433 gttagcttgaagga 446 |||||| ||||||| Sbjct: 14136023 gttagcctgaagga 14136036
>gb|BT013590.1| Lycopersicon esculentum clone 132353F, mRNA sequence Length = 1880 Score = 242 bits (122), Expect = 8e-61 Identities = 323/390 (82%) Strand = Plus / Plus Query: 40 gagaagctgcggatctcgattacaggagctggcggcttcatagcctcccacattgcaaag 99 |||||||| ||| |||| |||||||| ||||| || || || ||||| |||||||| | | Sbjct: 265 gagaagcttcgggtctctattacaggtgctggtggatttattgcctcacacattgcgagg 324 Query: 100 cgcctcaagggcgaggggcactacatcatcgcctctgactggaagaagaacgaacacatg 159 || || ||| |||||||| ||||| || || || |||||||||||||| || |||||| Sbjct: 325 cgtctgaagactgaggggcattacattattgcttccgactggaagaagaatgagcacatg 384 Query: 160 gaagaggatatgttctgccatgagtttcaccttgctgatctgagggtcatggacaactgc 219 ||||| ||||| || |||||||| || |||| |||||| ||||| ||||| ||||| Sbjct: 385 tctgaggacatgttttgtcatgagttccatcttgttgatctcagggtgatggataactgt 444 Query: 220 ctcaaggtaaccactggggttgaccatgttttcaatctggcagctgatatgggagggatg 279 | || || || | || ||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 445 ttgaaagtcacaaaaggagttgatcatgtgttcaatctcgctgctgatatgggaggtatg 504 Query: 280 ggcttcatccagtccaaccattctgtcatcatgtacaacaacactatgatcagctttaac 339 |||||||| ||||| ||||| || || |||||||| |||||||||||||||||||||||| Sbjct: 505 ggcttcattcagtcgaaccactcggtgatcatgtataacaacactatgatcagctttaac 564 Query: 340 atgcttgaggctggtagaatcaatggtgtcaagaggttcttttatgcctcgagtgcttgc 399 ||| | |||||| ||||| ||| |||| ||||||||||||||||| || ||||||||| Sbjct: 565 atgatggaggcttcaagaataaatagtgttaagaggttcttttatgcatccagtgcttgc 624 Query: 400 atctaccctgaatttaagcagctggaaact 429 |||||||||||||||||||| |||||||| Sbjct: 625 atctaccctgaatttaagcaattggaaact 654
>gb|DQ268848.1| Solanum tuberosum clone 155B09 NAD-dependent epimerase/dehydratase family protein-like protein mRNA, complete cds Length = 1521 Score = 194 bits (98), Expect = 2e-46 Identities = 248/298 (83%) Strand = Plus / Plus Query: 110 gcgaggggcactacatcatcgcctctgactggaagaagaacgaacacatggaagaggata 169 ||||||| |||||||| || ||||| || ||||||||||| || |||||| |||||||| Sbjct: 170 gcgagggccactacataattgcctccgattggaagaagaatgagcacatgacagaggata 229 Query: 170 tgttctgccatgagtttcaccttgctgatctgagggtcatggacaactgcctcaaggtaa 229 ||||||| ||||||||||| ||||| ||||| ||||| ||||| || ||| | ||||||| Sbjct: 230 tgttctgtcatgagtttcatcttgcggatcttagggttatggataattgcttgaaggtaa 289 Query: 230 ccactggggttgaccatgttttcaatctggcagctgatatgggagggatgggcttcatcc 289 | | || ||||||||||| |||||||| || ||||||||||| || ||||| ||||| | Sbjct: 290 caaaaggtgttgaccatgtcttcaatctcgctgctgatatgggtggcatgggtttcattc 349 Query: 290 agtccaaccattctgtcatcatgtacaacaacactatgatcagctttaacatgcttgagg 349 |||||||||| || || ||| | || |||||||||||||||||||| || ||| | || | Sbjct: 350 agtccaaccactcggttatcttctataacaacactatgatcagcttcaatatgatggaag 409 Query: 350 ctggtagaatcaatggtgtcaagaggttcttttatgcctcgagtgcttgcatctaccc 407 ||| ||| || || ||||||| |||||||| ||||| || ||||||||||| ||||| Sbjct: 410 ctgctaggattaacagtgtcaaaaggttcttctatgcatctagtgcttgcatataccc 467
>ref|NM_122767.2| Arabidopsis thaliana GDP-mannose 3,5-epimerase/ catalytic AT5G28840 mRNA, complete cds Length = 1611 Score = 105 bits (53), Expect = 1e-19 Identities = 233/293 (79%) Strand = Plus / Plus Query: 133 tctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcacctt 192 ||||||||||| ||||| ||||||||| || || |||||||| ||||||| || ||| Sbjct: 347 tctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagttccatctt 406 Query: 193 gctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttc 252 | |||||| ||||| ||||| || || ||||| || || || ||||| |||||||| Sbjct: 407 gttgatcttagggttatggagaattgtctcaaagttactgaaggagttgatcatgttttt 466 Query: 253 aatctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatg 312 || | || ||||||||||| || ||||| || |||||| || || ||||| || ||| Sbjct: 467 aacttagctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatg 526 Query: 313 tacaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaag 372 || || || |||||||| || || || ||| ||||||||| ||| |||||||| | ||| Sbjct: 527 tataataatactatgattagtttcaatatgattgaggctgctaggatcaatgggattaag 586 Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctgga 425 |||||||||||||| ||||||||||| ||||| || || ||||||||| |||| Sbjct: 587 aggttcttttatgcttcgagtgcttgtatctatccagagtttaagcagttgga 639
>gb|AY116953.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1134 Score = 105 bits (53), Expect = 1e-19 Identities = 233/293 (79%) Strand = Plus / Plus Query: 133 tctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcacctt 192 ||||||||||| ||||| ||||||||| || || |||||||| ||||||| || ||| Sbjct: 169 tctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagttccatctt 228 Query: 193 gctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttc 252 | |||||| ||||| ||||| || || ||||| || || || ||||| |||||||| Sbjct: 229 gttgatcttagggttatggagaattgtctcaaagttactgaaggagttgatcatgttttt 288 Query: 253 aatctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatg 312 || | || ||||||||||| || ||||| || |||||| || || ||||| || ||| Sbjct: 289 aacttagctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatg 348 Query: 313 tacaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaag 372 || || || |||||||| || || || ||| ||||||||| ||| |||||||| | ||| Sbjct: 349 tataataatactatgattagtttcaatatgattgaggctgctaggatcaatgggattaag 408 Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctgga 425 |||||||||||||| ||||||||||| ||||| || || ||||||||| |||| Sbjct: 409 aggttcttttatgcttcgagtgcttgtatctatccagagtttaagcagttgga 461
>gb|AY057694.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1404 Score = 105 bits (53), Expect = 1e-19 Identities = 233/293 (79%) Strand = Plus / Plus Query: 133 tctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcacctt 192 ||||||||||| ||||| ||||||||| || || |||||||| ||||||| || ||| Sbjct: 232 tctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagttccatctt 291 Query: 193 gctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttc 252 | |||||| ||||| ||||| || || ||||| || || || ||||| |||||||| Sbjct: 292 gttgatcttagggttatggagaattgtctcaaagttactgaaggagttgatcatgttttt 351 Query: 253 aatctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatg 312 || | || ||||||||||| || ||||| || |||||| || || ||||| || ||| Sbjct: 352 aacttagctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatg 411 Query: 313 tacaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaag 372 || || || |||||||| || || || ||| ||||||||| ||| |||||||| | ||| Sbjct: 412 tataataatactatgattagtttcaatatgattgaggctgctaggatcaatgggattaag 471 Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctgga 425 |||||||||||||| ||||||||||| ||||| || || ||||||||| |||| Sbjct: 472 aggttcttttatgcttcgagtgcttgtatctatccagagtttaagcagttgga 524
>gb|AY057660.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1452 Score = 105 bits (53), Expect = 1e-19 Identities = 233/293 (79%) Strand = Plus / Plus Query: 133 tctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcacctt 192 ||||||||||| ||||| ||||||||| || || |||||||| ||||||| || ||| Sbjct: 232 tctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagttccatctt 291 Query: 193 gctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttc 252 | |||||| ||||| ||||| || || ||||| || || || ||||| |||||||| Sbjct: 292 gttgatcttagggttatggagaattgtctcaaagttactgaaggagttgatcatgttttt 351 Query: 253 aatctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatg 312 || | || ||||||||||| || ||||| || |||||| || || ||||| || ||| Sbjct: 352 aacttagctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatg 411 Query: 313 tacaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatggtgtcaag 372 || || || |||||||| || || || ||| ||||||||| ||| |||||||| | ||| Sbjct: 412 tataataatactatgattagtttcaatatgattgaggctgctaggatcaatgggattaag 471 Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctgga 425 |||||||||||||| ||||||||||| ||||| || || ||||||||| |||| Sbjct: 472 aggttcttttatgcttcgagtgcttgtatctatccagagtttaagcagttgga 524
>dbj|AB235855.1| Oryza sativa (japonica cultivar-group) OsGME mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1053 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 265 gatatgggagggatgggcttcatccagtccaaccattctgtcatcatgtacaacaacact 324 |||||||| || ||||| || || || |||||||| ||||| ||| |||||||||| | | Sbjct: 238 gatatgggcggtatgggttttattcaatccaaccactctgttatcttgtacaacaatatt 297 Query: 325 atgatcagctttaacatgcttgaggctg 352 ||||||||||| |||||| | ||||||| Sbjct: 298 atgatcagcttcaacatggtggaggctg 325
>dbj|AK109046.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-D11, full insert sequence Length = 1134 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 265 gatatgggagggatgggcttcatccagtccaaccattctgtcatcatgtacaacaacact 324 |||||||| || ||||| || || || |||||||| ||||| ||| |||||||||| | | Sbjct: 258 gatatgggcggtatgggttttattcaatccaaccactctgttatcttgtacaacaatatt 317 Query: 325 atgatcagctttaacatgcttgaggctg 352 ||||||||||| |||||| | ||||||| Sbjct: 318 atgatcagcttcaacatggtggaggctg 345
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 58.0 bits (29), Expect = 3e-05 Identities = 182/233 (78%) Strand = Plus / Minus Query: 133 tctgactggaagaagaacgaacacatggaagaggatatgttctgccatgagtttcacctt 192 ||||||||||| ||||| ||||||||| || || |||||||| ||||||| || ||| Sbjct: 20042 tctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagttccatctt 19983 Query: 193 gctgatctgagggtcatggacaactgcctcaaggtaaccactggggttgaccatgttttc 252 | |||||| ||||| ||||| || || ||||| || || || ||||| |||||||| Sbjct: 19982 gttgatcttagggttatggagaattgtctcaaagttactgaaggagttgatcatgttttt 19923 Query: 253 aatctggcagctgatatgggagggatgggcttcatccagtccaaccattctgtcatcatg 312 || | || ||||||||||| || ||||| || |||||| || || ||||| || ||| Sbjct: 19922 aacttagctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatg 19863 Query: 313 tacaacaacactatgatcagctttaacatgcttgaggctggtagaatcaatgg 365 || || || |||||||| || || || ||| ||||||||| ||| |||||||| Sbjct: 19862 tataataatactatgattagtttcaatatgattgaggctgctaggatcaatgg 19810 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 373 aggttcttttatgcctcgagtgcttgcatctaccctgaatttaagcagctgga 425 |||||||||||||| ||||||||||| ||||| || || ||||||||| |||| Sbjct: 19716 aggttcttttatgcttcgagtgcttgtatctatccagagtttaagcagttgga 19664
>dbj|AK160359.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930017N04 product:unclassifiable, full insert sequence Length = 1507 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 318 caacactatgatcagctttaac 339 |||||||||||||||||||||| Sbjct: 1186 caacactatgatcagctttaac 1165
>dbj|AK017697.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730472G04 product:RIKEN cDNA 5730472G04 gene, full insert sequence Length = 1635 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 318 caacactatgatcagctttaac 339 |||||||||||||||||||||| Sbjct: 1535 caacactatgatcagctttaac 1514
>emb|AL627204.7| Mouse DNA sequence from clone RP23-118E21 on chromosome 4, complete sequence Length = 142447 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 318 caacactatgatcagctttaac 339 |||||||||||||||||||||| Sbjct: 21024 caacactatgatcagctttaac 21003
>gb|AF235096.5| Homo sapiens chromosome 8 clone RP11-562D1 map q24.13, complete sequence Length = 199966 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ggggttgaccatgttttcaat 255 ||||||||||||||||||||| Sbjct: 37676 ggggttgaccatgttttcaat 37656
>gb|AC095029.3| Homo sapiens chromosome 3 clone RP11-208J17, complete sequence Length = 151787 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 ctgaatttaagcagctggaaa 427 ||||||||||||||||||||| Sbjct: 88061 ctgaatttaagcagctggaaa 88081
>gb|AC135166.8| Homo sapiens chromosome 8, clone CTD-2552K11, complete sequence Length = 120301 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ggggttgaccatgttttcaat 255 ||||||||||||||||||||| Sbjct: 52690 ggggttgaccatgttttcaat 52670
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 agaatcaatggtgtcaagag 374 |||||||||||||||||||| Sbjct: 76989 agaatcaatggtgtcaagag 76970
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gcctcaagggcgaggggcac 120 |||||||||||||||||||| Sbjct: 1478931 gcctcaagggcgaggggcac 1478950
>gb|AY216843.1| Dendroica angelae specimen-voucher LSUMNS B11459 cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 390 aggatatgttctgccatgag 409
>gb|AF417923.1| Tringa glareola cytochrome b gene, complete cds; mitochondrial gene for mitochondrial product Length = 1143 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 390 aggatatgttctgccatgag 409
>gb|AY329468.1| Passer melanurus cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 998 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 252 aggatatgttctgccatgag 271
>gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome 8, complete sequence Length = 167913 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 agaatcaatggtgtcaagag 374 |||||||||||||||||||| Sbjct: 140864 agaatcaatggtgtcaagag 140845
>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12 Length = 299350 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 aagcgcctcaagggcgaggggcac 120 ||||| |||||||||||||||||| Sbjct: 105003 aagcggctcaagggcgaggggcac 105026
>gb|AY894228.1| Tringa glareola cytochrome b (cytb) gene, partial cds; mitochondrial Length = 870 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 207 aggatatgttctgccatgag 226
>gb|AY065718.1| Chamaeza meruloides cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 999 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 246 aggatatgttctgccatgag 265
>gb|AF230910.1| Passer melanurus 84 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 924 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 291 aggatatgttctgccatgag 310
>gb|AF382866.1|AF382866 Glossophaga soricina specimen-voucher TK43208 cytochrome b gene, complete cds; mitochondrial gene for mitochondrial product Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|AF382865.1|AF382865 Glossophaga soricina specimen-voucher TK43138 cytochrome b gene, complete cds; mitochondrial gene for mitochondrial product Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|AF382860.1|AF382860 Glossophaga soricina specimen-voucher TK4728 cytochrome b gene, complete cds; mitochondrial gene for mitochondrial product Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|AF382859.1|AF382859 Glossophaga soricina specimen-voucher TK34707 cytochrome b gene, complete cds; mitochondrial gene for mitochondrial product Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|L77905.1|RPAMTCYTBI Passer melanurus cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 924 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 291 aggatatgttctgccatgag 310
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 caaccattctgtcatcatgt 313 |||||||||||||||||||| Sbjct: 2905972 caaccattctgtcatcatgt 2905953
>gb|AY828994.1| Lepomis punctatus voucher UAIC 12291.01 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|AY828980.1| Lepomis microlophus voucher UAIC 12601.05 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 caaccattctgtcatcatgt 313 |||||||||||||||||||| Sbjct: 66118 caaccattctgtcatcatgt 66099
>dbj|AK110688.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-A01, full insert sequence Length = 1543 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 caaccattctgtcatcatgt 313 |||||||||||||||||||| Sbjct: 1221 caaccattctgtcatcatgt 1202
>emb|CR391989.15| Zebrafish DNA sequence from clone DKEY-263H23 in linkage group 19, complete sequence Length = 154561 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 tttaagcagctggaaactgt 431 |||||||||||||||||||| Sbjct: 65853 tttaagcagctggaaactgt 65834
>gb|U37299.1|FCU37299 Fratercula corniculata cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1045 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 292 aggatatgttctgccatgag 311
>gb|U37298.1|FCU37298 Fratercula cirrhata cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1045 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 292 aggatatgttctgccatgag 311
>gb|AC138112.4| Mus musculus BAC clone RP24-291E8 from 3, complete sequence Length = 173988 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atcagctttaacatgcttga 347 |||||||||||||||||||| Sbjct: 111444 atcagctttaacatgcttga 111425
>gb|U10177.1|SAU10177 Sciurus aberti B9 mitochondrion cytochrome b gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10176.1|SAU10176 Sciurus aberti c58 mitochondrion cytochrome b gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10175.1|SAU10175 Sciurus aberti d1 mitochondrion cytochrome b gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10174.1|SAU10174 Sciurus aberti f106 mitochondrion cytochrome b gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10173.1|SAU10173 Sciurus aberti f108 mitochondrion cytochrome b gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10172.1|SAU10172 Sciurus aberti f60 mitochondrion cytochrome b gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10171.1|SAU10171 Sciurus aberti f61 mitochondrion cytochrome b gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10170.1|SAU10170 Sciurus aberti f91 mitochondrion cytochrome b gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10183.1|SAU10183 Sciurus aberti K124 mitochondrion cytochrome b gene, complete cds Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|U10182.1|SAU10182 Sciurus aberti K125 mitochondrion cytochrome b gene, complete cds Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|U10181.1|SAU10181 Sciurus aberti K129 mitochondrion cytochrome b gene, complete cds Length = 1140 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|U10179.1|SAU10179 Sciurus aberti f98 mitochondrion cytochrome b gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|U10178.1|SAU10178 Sciurus aberti B10 mitochondrion cytochrome b gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 387 aggatatgttctgccatgag 406
>gb|U10169.1|SAU10169 Sciurus aberti A93 mitochondrion cytochrome b gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10168.1|SAU10168 Sciurus aberti A79 mitochondrion cytochrome b gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10167.1|SAU10167 Sciurus aberti A156 mitochondrion cytochrome b gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10166.1|SAU10166 Sciurus aberti A115 mitochondrion cytochrome b gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10165.1|SAU10165 Sciurus aberti A111 mitochondrion cytochrome b gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10164.1|SAU10164 Sciurus aberti A110 mitochondrion cytochrome b gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U10163.1|SAU10163 Sciurus aberti A107 mitochondrion cytochrome b gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 384 aggatatgttctgccatgag 403
>gb|U60441.1|SSU60441 Sciurus sp. cytochrome b gene, mitochondrial gene encoding mitochondrial protein, complete cds Length = 1161 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aggatatgttctgccatgag 183 |||||||||||||||||||| Sbjct: 408 aggatatgttctgccatgag 427 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,745,002 Number of Sequences: 3902068 Number of extensions: 3745002 Number of successful extensions: 92788 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92565 Number of HSP's gapped (non-prelim): 210 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)