ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet41b03 |
|---|---|
| Clone Library Name | barley_pub |
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 110 bits (274), Expect = 2e-24 Identities = 52/115 (45%), Positives = 75/115 (65%) Frame = +2 Query: 113 VPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTNGRLVTDFMSEALGL 292 +PA+ FGDS D GNN+ + T + N+ PYG DF VATGRF+NG + +D++++ +G+ Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261 Query: 293 ATSVPAYLDGSYTVDQLAGGVSFASGGTGLDTLTAKIASVISISQQLDYFKEYKE 457 VPAYLD + L GVSFASGG G + T++ A+ I + QL YF++Y E Sbjct: 262 KEIVPAYLDPKIQPNDLLTGVSFASGGAGYNPTTSEAANAIPMLDQLTYFQDYIE 316
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 104 bits (259), Expect = 1e-22 Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 6/121 (4%) Frame = +2 Query: 113 VPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTNGRLVTDFMSEALGL 292 +PA+ FGDS D GNN+ + T + N+ PYG DF GVATGRF+NGR+ +D++S+ LG+ Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182 Query: 293 ATSVPAYLD------GSYTVDQLAGGVSFASGGTGLDTLTAKIASVISISQQLDYFKEYK 454 VPAY+D L GVSFASGG G T++ V ++ QL YF++YK Sbjct: 183 KEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESWKVTTMLDQLTYFQDYK 242 Query: 455 E 457 + Sbjct: 243 K 243
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 51.2 bits (121), Expect = 1e-06 Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 1/109 (0%) Frame = +2 Query: 80 LSSGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNF-PPYGRDFDGGVATGRFTNGR 256 LS + A PAI FGDS D G + A G PP+G F G A GR+ +GR Sbjct: 17 LSPSTHAHQCHFPAIFNFGDSNSDTGGL----SAAFGQAGPPHGSSFFGSPA-GRYCDGR 71 Query: 257 LVTDFMSEALGLATSVPAYLDGSYTVDQLAGGVSFASGGTGLDTLTAKI 403 LV DF++E+LGL + A+LD + G +FA+ G+ + L + + Sbjct: 72 LVIDFIAESLGL-PYLSAFLDS--VGSNFSHGANFATAGSPIRALNSTL 117
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 45.4 bits (106), Expect = 7e-05 Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 5/121 (4%) Frame = +2 Query: 56 PLILVHLLLSSGSGATAGKV---PAIIVFGDSTVDPGNND--YIPTVARGNFPPYGRDFD 220 P+I + LL S A A + PAI FGDS D G + P PPYG F Sbjct: 10 PIITLSFLLCMLSLAYASETCDFPAIFNFGDSNSDTGGKAAAFYPLN-----PPYGETFF 64 Query: 221 GGVATGRFTNGRLVTDFMSEALGLATSVPAYLDGSYTVDQLAGGVSFASGGTGLDTLTAK 400 +TGR+++GRL+ DF++E+ L P YL S G FA+ G+ + T Sbjct: 65 HR-STGRYSDGRLIIDFIAESFNLPYLSP-YL--SSLGSNFKHGADFATAGSTIKLPTTI 120 Query: 401 I 403 I Sbjct: 121 I 121
>HA27_HUMAN (P05536) HLA class II histocompatibility antigen, DQ(W3) alpha| chain precursor Length = 254 Score = 31.6 bits (70), Expect = 0.99 Identities = 25/85 (29%), Positives = 37/85 (43%) Frame = +2 Query: 74 LLLSSGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTNG 253 L+ S S A +VP + VF S V G + + + FPP V +NG Sbjct: 98 LIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPV-------VNITWLSNG 150 Query: 254 RLVTDFMSEALGLATSVPAYLDGSY 328 VT+ +SE L+ S ++ SY Sbjct: 151 HSVTEGVSETSFLSKSDHSFFKISY 175
>HA23_HUMAN (P01909) HLA class II histocompatibility antigen, DQ(3) alpha chain| precursor (DC-alpha) (HLA-DCA) (HLA-DQA1*05011) (HLA-DQA1*0502) Length = 254 Score = 31.6 bits (70), Expect = 0.99 Identities = 25/85 (29%), Positives = 37/85 (43%) Frame = +2 Query: 74 LLLSSGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTNG 253 L+ S S A +VP + VF S V G + + + FPP V +NG Sbjct: 98 LIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPV-------VNITWLSNG 150 Query: 254 RLVTDFMSEALGLATSVPAYLDGSY 328 VT+ +SE L+ S ++ SY Sbjct: 151 HSVTEGVSETSFLSKSDHSFFKISY 175
>HA22_HUMAN (P04226) HLA class II histocompatibility antigen, DQ(2) alpha chain| precursor Length = 254 Score = 31.2 bits (69), Expect = 1.3 Identities = 25/85 (29%), Positives = 37/85 (43%) Frame = +2 Query: 74 LLLSSGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTNG 253 L+ S S A +VP + VF S V G + + + FPP V +NG Sbjct: 98 LIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPV-------VNITWLSNG 150 Query: 254 RLVTDFMSEALGLATSVPAYLDGSY 328 VT+ +SE L+ S ++ SY Sbjct: 151 HSVTEGVSETSFLSKSDHSFFKISY 175
>3BP1_MOUSE (P55194) SH3 domain-binding protein 1 (3BP-1)| Length = 601 Score = 30.8 bits (68), Expect = 1.7 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 10/87 (11%) Frame = -2 Query: 303 TEVAKPSASDMKSVTRRPLVNRPVATPP----SKSRPYGGKLPLATVGM*SLLPGSTVES 136 TE A SA DM T+RP RP PP ++S P LP +V PG+ Sbjct: 464 TETAA-SAEDMTRKTKRPAPARPTMPPPQPSSTRSSPPAPSLPPGSVS-----PGTPQAL 517 Query: 135 PNTMIAGTF------PAVAPLPDDSKR 73 P ++ + P + P+P R Sbjct: 518 PRRLVGTSLRAPTMPPPLPPVPPQPAR 544
>PRP46_ASHGO (Q75BY3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 425 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +2 Query: 227 VATGRFTNGRLVTDFMSEALGLATSVPAYLDGSYTVDQLAGGVSFASGGTG 379 + + + +G+L+T+F SEALG+ ++ D GV FA G TG Sbjct: 305 IRSWKLVDGQLLTNFNSEALGIVNTLACNQD----------GVLFAGGDTG 345
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 30.0 bits (66), Expect = 2.9 Identities = 28/100 (28%), Positives = 41/100 (41%) Frame = +2 Query: 74 LLLSSGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTNG 253 L LS + + A + VFGDS D GNN GR G+ T Sbjct: 12 LALSISAISNAHAYNNLYVFGDSLSDGGNN--------------GRYTVDGI---NGTES 54 Query: 254 RLVTDFMSEALGLATSVPAYLDGSYTVDQLAGGVSFASGG 373 +L DF+++ LG+ V+ GG ++A+GG Sbjct: 55 KLYNDFIAQQLGIE-----------LVNSKKGGTNYAAGG 83
>HA24_HUMAN (P04225) HLA class II histocompatibility antigen, DQ(4) alpha chain| precursor (DQ-DRW9 alpha chain) (Fragment) Length = 232 Score = 30.0 bits (66), Expect = 2.9 Identities = 24/81 (29%), Positives = 35/81 (43%) Frame = +2 Query: 86 SGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTNGRLVT 265 S S A +VP + VF S V G + + + FPP V +NG VT Sbjct: 80 SNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPV-------VNITWLSNGHSVT 132 Query: 266 DFMSEALGLATSVPAYLDGSY 328 + +SE L+ S ++ SY Sbjct: 133 EGVSETSFLSKSDHSFFKISY 153
>PRIA_LENED (Q01200) Protein priA precursor| Length = 258 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Frame = -2 Query: 381 SPVPPDAKLTPPASW-----STV*LPSR*AGTEVAKPSASDMKSVTRRPLVNRPVATPP 220 +P PP K PP W T LP T PS++ S P + P +TPP Sbjct: 69 TPTPPSGKSCPPNGWYWNDEKTCCLPKWPTSTPTPTPSSAHHTSTHTSP-SSTPTSTPP 126
>PGCB_MOUSE (Q61361) Brevican core protein precursor| Length = 883 Score = 30.0 bits (66), Expect = 2.9 Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 3/101 (2%) Frame = -2 Query: 372 PPDAKLTPPASWSTV*LP--SR*AGTEVAKPSASDMKSVTRRPLVNRPVATPPSKSRPYG 199 PP L PP WS P +R G E P S + P + + + P Sbjct: 517 PPAETLLPPREWSATSTPGGAREVGGETGSPELSGV------PRESEEAGSSSLEDGPSL 570 Query: 198 GKLPLATVGM*SLLPGSTVESPNTMIAGTFPAVAP-LPDDS 79 A VG L S +S T++AGT P LP DS Sbjct: 571 LPATWAPVGPRELETPSEEKSGRTVLAGTSVQAQPVLPTDS 611
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 30.0 bits (66), Expect = 2.9 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -2 Query: 264 VTRRPLVNRPVATPPSKSRPYG 199 V+RRP +PVATP + +RP G Sbjct: 2880 VSRRPTTRQPVATPTTSARPRG 2901
>EFS_MOUSE (Q64355) Embryonal Fyn-associated substrate (SRC-interacting| protein) (Signal-integrating protein) Length = 560 Score = 30.0 bits (66), Expect = 2.9 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Frame = -2 Query: 417 DITDAIFAVKVSSPVPPDAKLTPPASWST-----V*LPSR*AGTEVAKPSASDMKSVTRR 253 D + I+ V + P PP + P AS ST LP+R + +P +S++RR Sbjct: 247 DADEGIYDVPLLGPEPPSPE-PPVASSSTDLDTVAQLPTR-SSPPQHRPRLPSTESLSRR 304 Query: 252 PLVNRPVATPPSKS 211 PL PV+ P+ S Sbjct: 305 PLPALPVSEAPAPS 318
>HA21_HUMAN (P01908) HLA class II histocompatibility antigen, DQ(1) alpha chain| precursor (DC-4 alpha chain) Length = 255 Score = 30.0 bits (66), Expect = 2.9 Identities = 24/81 (29%), Positives = 35/81 (43%) Frame = +2 Query: 86 SGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTNGRLVT 265 S S A +VP + VF S V G + + + FPP V +NG VT Sbjct: 103 SNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPV-------VNITWLSNGHSVT 155 Query: 266 DFMSEALGLATSVPAYLDGSY 328 + +SE L+ S ++ SY Sbjct: 156 EGVSETSFLSKSDHSFFKISY 176
>MNB_DROME (P49657) Serine/threonine-protein kinase minibrain (EC 2.7.12.1)| Length = 908 Score = 30.0 bits (66), Expect = 2.9 Identities = 28/104 (26%), Positives = 40/104 (38%) Frame = +2 Query: 71 HLLLSSGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTN 250 HL+++ S +A G +PG N P+ A FP G A G ++ Sbjct: 759 HLMMTDSSVISASAAGG----GQGGGNPGQNPVTPSAAAFLFPSQPAGTLYGTALGSLSD 814 Query: 251 GRLVTDFMSEALGLATSVPAYLDGSYTVDQLAGGVSFASGGTGL 382 L + L SVP L S + +G S SGG G+ Sbjct: 815 LPL-------PMPLPMSVPLQLPPSSSSSVSSGSASVGSGGVGV 851
>CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel alpha-1E subunit| (Voltage-gated calcium channel alpha subunit Cav2.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Brain calcium channel II) (BII) Length = 2259 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 97 GDGREGPRDHRVRGLHGGSRQQRLHPHRR 183 G EG RDH RG HGG ++ +H R Sbjct: 942 GASTEGERDHEARGSHGG-KEPTIHEEER 969
>SRBP1_RAT (P56720) Sterol regulatory element-binding protein 1 (SREBP-1)| (Sterol regulatory element-binding transcription factor 1) (Adipocyte determination- and differentiation-dependent factor 1) (ADD1) (Fragment) Length = 1024 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 7/53 (13%) Frame = -2 Query: 225 PPSKSRPYGGKLPLATVGM*SL-------LPGSTVESPNTMIAGTFPAVAPLP 88 PPS P P +G SL LPG+T ++P+++ G+ P ++P P Sbjct: 121 PPSFPPPPVQLSPAPVLGYSSLPSGFSGTLPGNTQQTPSSLPLGSTPGISPTP 173
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 29.3 bits (64), Expect = 4.9 Identities = 28/99 (28%), Positives = 38/99 (38%) Frame = -2 Query: 378 PVPPDAKLTPPASWSTV*LPSR*AGTEVAKPSASDMKSVTRRPLVNRPVATPPSKSRPYG 199 PV TP S STV PS GT + + T +P+ +ATP S ++ G Sbjct: 3830 PVWISTTTTPTTSGSTV-TPSSIPGTT----HTPTVLTTTTQPVATGSMATPSSSTQTSG 3884 Query: 198 GKLPLATVGM*SLLPGSTVESPNTMIAGTFPAVAPLPDD 82 L T GST +T P P+P + Sbjct: 3885 TPPSLITTATTITATGSTTNPSST------PGTTPIPPE 3917
>IF2C_EUGGR (Q9XEK9) Translation initiation factor IF-2, chloroplast (Fragment)| Length = 822 Score = 29.3 bits (64), Expect = 4.9 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Frame = -2 Query: 384 SSPVPPDAKLTPPASWSTV*LP---SR*AGT-----EVAKPSASDMKSVTRRPLVNRPVA 229 S+P PP+A +P A +P S AG EV KP+ + P++ RPV Sbjct: 20 STPTPPEAPTSPSARQPVTQVPQANSVPAGAVASQAEVKKPADPQPPATPSAPVLRRPVR 79 Query: 228 TPPSKSRP 205 T S P Sbjct: 80 TAMPASPP 87
>ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protein-associated| with nuclear matrix of 75 kDa) Length = 580 Score = 29.3 bits (64), Expect = 4.9 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +2 Query: 161 NDYIPTVARGNFPPY-GRDFDGGVATGRFTNGRLVTDFMSEALGLATSVPAYLDGSYTVD 337 +DY+ + RG + + G D D G + G L D+ + G S+ +YL+ SY +D Sbjct: 5 DDYVHSTCRGAYQDFNGMDRDYGPGS----YGGLDRDYGHGSYGGQRSMDSYLNQSYGMD 60 Query: 338 QLAGG 352 +GG Sbjct: 61 NHSGG 65
>Y187_THEVO (Q97CB5) UPF0290 protein TV0187| Length = 183 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +2 Query: 35 SQVVRYWPLILVHLLLSS-GSGATAGKVPAIIVFGDSTVD 151 S V+ YW H +L + GS A + ++PA++ FG T D Sbjct: 65 SGVIIYWISYATHFILGNYGSIALSIEIPAVMAFGSLTGD 104
>HA26_HUMAN (P01906) HLA class II histocompatibility antigen, DQ(6) alpha chain| precursor (DX alpha chain) (HLA-DQA1) Length = 255 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/88 (27%), Positives = 37/88 (42%) Frame = +2 Query: 65 LVHLLLSSGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRF 244 L ++ S S A +VP + VF V G + + + FPP V Sbjct: 96 LEFMMRQSNSTAATNEVPEVTVFSKFPVTLGQPNTLICLVDNIFPPV-------VNITWL 148 Query: 245 TNGRLVTDFMSEALGLATSVPAYLDGSY 328 +NG VT+ +SE L+ S ++ SY Sbjct: 149 SNGHSVTEGVSETSFLSKSDHSFFKISY 176
>HA25_HUMAN (P01907) HLA class II histocompatibility antigen, DQ(5) alpha chain| precursor (DC-1 alpha chain) Length = 255 Score = 28.9 bits (63), Expect = 6.4 Identities = 23/79 (29%), Positives = 35/79 (44%) Frame = +2 Query: 92 SGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRFTNGRLVTDF 271 S A +VP + VF S V G + + + FPP V +NG+ VT+ Sbjct: 105 STAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPV-------VNITWLSNGQSVTEG 157 Query: 272 MSEALGLATSVPAYLDGSY 328 +SE L+ S ++ SY Sbjct: 158 VSETSFLSKSDHSFFKISY 176
>EF2_CHLKE (P28996) Elongation factor 2 (EF-2)| Length = 845 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 170 IPTVARGNFPPYGRDFDGGVATGR 241 IP +G F +GR F G +ATGR Sbjct: 386 IPAADKGRFYAFGRVFSGRIATGR 409
>DXS_DEIRA (Q9RUB5) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 629 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/76 (25%), Positives = 32/76 (42%) Frame = +2 Query: 65 LVHLLLSSGSGATAGKVPAIIVFGDSTVDPGNNDYIPTVARGNFPPYGRDFDGGVATGRF 244 ++H++ + G G + + I G + DP +Y+P+ A +G T Sbjct: 282 ILHIVTTKGKGLSYAEADPIYWHGPAKFDPATGEYVPSSAYSWSAAFGEAVTEWAKTDPR 341 Query: 245 TNGRLVTDFMSEALGL 292 T +VT M E GL Sbjct: 342 T--FVVTPAMREGSGL 355
>PITX3_MOUSE (O35160) Pituitary homeobox 3 (Homeobox protein PITX3)| Length = 302 Score = 28.9 bits (63), Expect = 6.4 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Frame = -2 Query: 399 FAVKVSSPVPPDAKLTPPASWSTV*LPSR*AGTEVAKPSASDMKSVTRRPLVNRPVATPP 220 FA + VPP ++ P S+ P A AK SV PL ++PV +PP Sbjct: 133 FAAPLGGLVPPYEEVYPGYSYGNW-PPKALAPPLAAKTFPFAFNSVNVGPLASQPVFSPP 191 Query: 219 SKSRPYGGKLPLATVGM*SLLPGSTVESPNTM--IAGTFPAVAP 94 S + + V + PG TV P + + G P +AP Sbjct: 192 S-------SIAASMVPSAAAAPG-TVPGPGALQGLGGAPPGLAP 227
>EF2_CRYPV (Q23716) Elongation factor 2 (EF-2)| Length = 832 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 170 IPTVARGNFPPYGRDFDGGVATGR 241 +PT +G F +GR F G VATG+ Sbjct: 376 VPTSDKGRFYAFGRVFSGTVATGQ 399
>FLAA_AQUPY (P46210) Flagellin| Length = 501 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/61 (24%), Positives = 27/61 (44%) Frame = +2 Query: 248 NGRLVTDFMSEALGLATSVPAYLDGSYTVDQLAGGVSFASGGTGLDTLTAKIASVISISQ 427 NGRLV + E +G+ S ++++DQ+ GV+ T K+ + I Sbjct: 313 NGRLVIETSGETVGVEVSKSGTGGTTFSLDQIISGVNKTVNNTNTQASAIKVGDLRIIDD 372 Query: 428 Q 430 + Sbjct: 373 E 373
>CLPA_RHOBL (P05444) ClpA homolog protein| Length = 793 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 10 LRPSVEDVLTSRAVLATDLGAPLAVVRQRGDGRE 111 ++ V +VL+ + + D+GA LA R RGD E Sbjct: 262 IKKEVPEVLSGATIFSLDMGALLAGTRYRGDFEE 295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,240,990 Number of Sequences: 219361 Number of extensions: 1114448 Number of successful extensions: 4423 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4417 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
