| Clone Name | baet41a05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_194083.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1352 Score = 343 bits (173), Expect = 3e-91 Identities = 256/283 (90%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 184 gccaagggcggcgccccggggttcaaggtggccgtggtgggcgcggccggggggatcggc 243 |||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 169 gccaagggcggcgcgccggggttcaaggtggccgtgctgggcgcggcgggagggatcggg 228 Query: 244 cagtcgctgtcgctgctcatgaagatgaacccgctcgtctccgtgctccacctctacgac 303 ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 229 cagccgctgtcgctgctcatgaagttgaacccgctcgtctctgtgctccacctctatgat 288 Query: 304 gtcgtcaacacgcccggggtcaccgccgacgtcagccacatggacaccagcgccgtg--- 360 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 289 gtcgtcaacacgcccggtgtcaccgccgatgtcagccacatggacaccaccgccgtggtc 348 Query: 361 cgtggcttcattggccaacaacagcttgaggcagcacttacaggaatggatcttgtcatc 420 ||||| ||| |||| | | |||||||||||||||||||||||||||||||||||||| Sbjct: 349 cgtggtttccttgggcccaaccagcttgaggcagcacttacaggaatggatcttgtcatt 408 Query: 421 atccctgccggcctcccaagaaaaccaggaatgacaagggatg 463 |||||||| || |||||||| |||||||||||||||||||||| Sbjct: 409 atccctgctggtctcccaaggaaaccaggaatgacaagggatg 451 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 84 ctccccctcgcaccgcatcgcccgcgtcgccgcgcacctca 124 |||| |||| ||||||||||||||||||||||| ||||||| Sbjct: 75 ctccgcctcccaccgcatcgcccgcgtcgccgcccacctca 115
>dbj|AK104821.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B02, full insert sequence Length = 1233 Score = 343 bits (173), Expect = 3e-91 Identities = 256/283 (90%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 184 gccaagggcggcgccccggggttcaaggtggccgtggtgggcgcggccggggggatcggc 243 |||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 128 gccaagggcggcgcgccggggttcaaggtggccgtgctgggcgcggcgggagggatcggg 187 Query: 244 cagtcgctgtcgctgctcatgaagatgaacccgctcgtctccgtgctccacctctacgac 303 ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 188 cagccgctgtcgctgctcatgaagttgaacccgctcgtctctgtgctccacctctatgat 247 Query: 304 gtcgtcaacacgcccggggtcaccgccgacgtcagccacatggacaccagcgccgtg--- 360 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 248 gtcgtcaacacgcccggtgtcaccgccgatgtcagccacatggacaccaccgccgtggtc 307 Query: 361 cgtggcttcattggccaacaacagcttgaggcagcacttacaggaatggatcttgtcatc 420 ||||| ||| |||| | | |||||||||||||||||||||||||||||||||||||| Sbjct: 308 cgtggtttccttgggcccaaccagcttgaggcagcacttacaggaatggatcttgtcatt 367 Query: 421 atccctgccggcctcccaagaaaaccaggaatgacaagggatg 463 |||||||| || |||||||| |||||||||||||||||||||| Sbjct: 368 atccctgctggtctcccaaggaaaccaggaatgacaagggatg 410 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 84 ctccccctcgcaccgcatcgcccgcgtcgccgcgcacctca 124 |||| |||| ||||||||||||||||||||||| ||||||| Sbjct: 34 ctccgcctcccaccgcatcgcccgcgtcgccgcccacctca 74
>dbj|AK067105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097J20, full insert sequence Length = 1497 Score = 343 bits (173), Expect = 3e-91 Identities = 256/283 (90%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 184 gccaagggcggcgccccggggttcaaggtggccgtggtgggcgcggccggggggatcggc 243 |||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 347 gccaagggcggcgcgccggggttcaaggtggccgtgctgggcgcggcgggagggatcggg 406 Query: 244 cagtcgctgtcgctgctcatgaagatgaacccgctcgtctccgtgctccacctctacgac 303 ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 407 cagccgctgtcgctgctcatgaagttgaacccgctcgtctctgtgctccacctctatgat 466 Query: 304 gtcgtcaacacgcccggggtcaccgccgacgtcagccacatggacaccagcgccgtg--- 360 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 467 gtcgtcaacacgcccggtgtcaccgccgatgtcagccacatggacaccaccgccgtggtc 526 Query: 361 cgtggcttcattggccaacaacagcttgaggcagcacttacaggaatggatcttgtcatc 420 ||||| ||| |||| | | |||||||||||||||||||||||||||||||||||||| Sbjct: 527 cgtggtttccttgggcccaaccagcttgaggcagcacttacaggaatggatcttgtcatt 586 Query: 421 atccctgccggcctcccaagaaaaccaggaatgacaagggatg 463 |||||||| || |||||||| |||||||||||||||||||||| Sbjct: 587 atccctgctggtctcccaaggaaaccaggaatgacaagggatg 629 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 84 ctccccctcgcaccgcatcgcccgcgtcgccgcgcacctca 124 |||| |||| ||||||||||||||||||||||| ||||||| Sbjct: 253 ctccgcctcccaccgcatcgcccgcgtcgccgcccacctca 293
>dbj|AK064972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B17, full insert sequence Length = 1319 Score = 343 bits (173), Expect = 3e-91 Identities = 256/283 (90%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 184 gccaagggcggcgccccggggttcaaggtggccgtggtgggcgcggccggggggatcggc 243 |||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 154 gccaagggcggcgcgccggggttcaaggtggccgtgctgggcgcggcgggagggatcggg 213 Query: 244 cagtcgctgtcgctgctcatgaagatgaacccgctcgtctccgtgctccacctctacgac 303 ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 214 cagccgctgtcgctgctcatgaagttgaacccgctcgtctctgtgctccacctctatgat 273 Query: 304 gtcgtcaacacgcccggggtcaccgccgacgtcagccacatggacaccagcgccgtg--- 360 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 274 gtcgtcaacacgcccggtgtcaccgccgatgtcagccacatggacaccaccgccgtggtc 333 Query: 361 cgtggcttcattggccaacaacagcttgaggcagcacttacaggaatggatcttgtcatc 420 ||||| ||| |||| | | |||||||||||||||||||||||||||||||||||||| Sbjct: 334 cgtggtttccttgggcccaaccagcttgaggcagcacttacaggaatggatcttgtcatt 393 Query: 421 atccctgccggcctcccaagaaaaccaggaatgacaagggatg 463 |||||||| || |||||||| |||||||||||||||||||||| Sbjct: 394 atccctgctggtctcccaaggaaaccaggaatgacaagggatg 436 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 84 ctccccctcgcaccgcatcgcccgcgtcgccgcgcacctca 124 |||| |||| ||||||||||||||||||||||| ||||||| Sbjct: 60 ctccgcctcccaccgcatcgcccgcgtcgccgcccacctca 100
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 248 bits (125), Expect = 1e-62 Identities = 164/177 (92%) Strand = Plus / Minus Query: 184 gccaagggcggcgccccggggttcaaggtggccgtggtgggcgcggccggggggatcggc 243 |||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 31785334 gccaagggcggcgcgccggggttcaaggtggccgtgctgggcgcggcgggagggatcggg 31785275 Query: 244 cagtcgctgtcgctgctcatgaagatgaacccgctcgtctccgtgctccacctctacgac 303 ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 31785274 cagccgctgtcgctgctcatgaagttgaacccgctcgtctctgtgctccacctctatgat 31785215 Query: 304 gtcgtcaacacgcccggggtcaccgccgacgtcagccacatggacaccagcgccgtg 360 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 31785214 gtcgtcaacacgcccggtgtcaccgccgatgtcagccacatggacaccaccgccgtg 31785158 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 382 cagcttgaggcagcacttacaggaatggatcttgtcatcatccctgccggcctcccaaga 441 |||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| Sbjct: 31784200 cagcttgaggcagcacttacaggaatggatcttgtcattatccctgctggtctcccaagg 31784141 Query: 442 aaaccaggaatgacaagggatg 463 |||||||||||||||||||||| Sbjct: 31784140 aaaccaggaatgacaagggatg 31784119 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 84 ctccccctcgcaccgcatcgcccgcgtcgccgcgcacctca 124 |||| |||| ||||||||||||||||||||||| ||||||| Sbjct: 31785509 ctccgcctcccaccgcatcgcccgcgtcgccgcccacctca 31785469 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 cgcaccgcatcgcccgcgtcgccg 115 |||||||| ||||||||||||||| Sbjct: 23354607 cgcaccgcgtcgcccgcgtcgccg 23354584
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 248 bits (125), Expect = 1e-62 Identities = 164/177 (92%) Strand = Plus / Minus Query: 184 gccaagggcggcgccccggggttcaaggtggccgtggtgggcgcggccggggggatcggc 243 |||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 110560 gccaagggcggcgcgccggggttcaaggtggccgtgctgggcgcggcgggagggatcggg 110501 Query: 244 cagtcgctgtcgctgctcatgaagatgaacccgctcgtctccgtgctccacctctacgac 303 ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 110500 cagccgctgtcgctgctcatgaagttgaacccgctcgtctctgtgctccacctctatgat 110441 Query: 304 gtcgtcaacacgcccggggtcaccgccgacgtcagccacatggacaccagcgccgtg 360 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 110440 gtcgtcaacacgcccggtgtcaccgccgatgtcagccacatggacaccaccgccgtg 110384 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 382 cagcttgaggcagcacttacaggaatggatcttgtcatcatccctgccggcctcccaaga 441 |||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| Sbjct: 109426 cagcttgaggcagcacttacaggaatggatcttgtcattatccctgctggtctcccaagg 109367 Query: 442 aaaccaggaatgacaagggatg 463 |||||||||||||||||||||| Sbjct: 109366 aaaccaggaatgacaagggatg 109345 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 84 ctccccctcgcaccgcatcgcccgcgtcgccgcgcacctca 124 |||| |||| ||||||||||||||||||||||| ||||||| Sbjct: 110735 ctccgcctcccaccgcatcgcccgcgtcgccgcccacctca 110695
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 248 bits (125), Expect = 1e-62 Identities = 164/177 (92%) Strand = Plus / Minus Query: 184 gccaagggcggcgccccggggttcaaggtggccgtggtgggcgcggccggggggatcggc 243 |||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 31875850 gccaagggcggcgcgccggggttcaaggtggccgtgctgggcgcggcgggagggatcggg 31875791 Query: 244 cagtcgctgtcgctgctcatgaagatgaacccgctcgtctccgtgctccacctctacgac 303 ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 31875790 cagccgctgtcgctgctcatgaagttgaacccgctcgtctctgtgctccacctctatgat 31875731 Query: 304 gtcgtcaacacgcccggggtcaccgccgacgtcagccacatggacaccagcgccgtg 360 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 31875730 gtcgtcaacacgcccggtgtcaccgccgatgtcagccacatggacaccaccgccgtg 31875674 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 382 cagcttgaggcagcacttacaggaatggatcttgtcatcatccctgccggcctcccaaga 441 |||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| Sbjct: 31874716 cagcttgaggcagcacttacaggaatggatcttgtcattatccctgctggtctcccaagg 31874657 Query: 442 aaaccaggaatgacaagggatg 463 |||||||||||||||||||||| Sbjct: 31874656 aaaccaggaatgacaagggatg 31874635 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 84 ctccccctcgcaccgcatcgcccgcgtcgccgcgcacctca 124 |||| |||| ||||||||||||||||||||||| ||||||| Sbjct: 31876025 ctccgcctcccaccgcatcgcccgcgtcgccgcccacctca 31875985 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 cgcaccgcatcgcccgcgtcgccg 115 |||||||| ||||||||||||||| Sbjct: 23347635 cgcaccgcgtcgcccgcgtcgccg 23347612
>gb|AY309494.1| Triticum aestivum glyoxysomal malate dehydrogenase mRNA, partial cds Length = 989 Score = 123 bits (62), Expect = 5e-25 Identities = 62/62 (100%) Strand = Plus / Plus Query: 402 aggaatggatcttgtcatcatccctgccggcctcccaagaaaaccaggaatgacaaggga 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aggaatggatcttgtcatcatccctgccggcctcccaagaaaaccaggaatgacaaggga 60 Query: 462 tg 463 || Sbjct: 61 tg 62
>gb|BT009213.1| Triticum aestivum clone wle1n.pk0057.g6:fis, full insert mRNA sequence Length = 1405 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 |||||||| || || ||||||||| ||||| |||||||||||||| | |||||||||||| Sbjct: 99 ggcgcggcgggcggcatcggccagccgctggcgctgctcatgaagctcaacccgctcgtc 158 Query: 283 tccgtgctccacctctacgacgtcgtcaacacgcccggggtcaccgccgacgtcagccac 342 ||| ||| |||||||||| ||| | ||||||||| ||| ||||||||||| |||| Sbjct: 159 tcctccctctccctctacgacatcgccgccacgcccggcgtcgccgccgacgtctcccac 218 Query: 343 atggacaccagcgcc 357 || ||||| ||||| Sbjct: 219 atcaacacccgcgcc 233
>gb|DQ269456.1| Stevia rebaudiana malate dehydrogenase mRNA, partial cds Length = 605 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 376 caacaacagcttgaggcagcacttacaggaatggatcttgtcatcatccctgccggcctc 435 |||| ||| ||||| |||||||||||||| ||||||||||| ||||| || || ||| | Sbjct: 331 caaccacaacttgatgcagcacttacagggatggatcttgtgatcataccagctggcgtt 390 Query: 436 ccaagaaaaccaggaatgaca 456 ||||||||||| ||||||||| Sbjct: 391 ccaagaaaacctggaatgaca 411
>gb|BT012828.1| Lycopersicon esculentum clone 113882F, mRNA sequence Length = 1294 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 394 gcacttacaggaatggatcttgtcatcatccctgccggcctcccaagaaaaccaggaatg 453 ||||||||||||||||| ||||| ||||| ||||| || | ||||||||||| |||||| Sbjct: 403 gcacttacaggaatggaccttgtgatcatacctgctggtattccaagaaaacctggaatg 462 Query: 454 acaagggatg 463 ||||| |||| Sbjct: 463 acaagagatg 472
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 257 tgctcatgaagatgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgc 316 ||||||||||||||||||| || || || |||||||| || ||||| || |||||||| | Sbjct: 27134287 tgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaacactc 27134228 Query: 317 ccggggtcaccgccgacgtcagccacatggacac 350 |||| ||||| || ||| | ||||||||| |||| Sbjct: 27134227 ccggtgtcacagctgacattagccacatgaacac 27134194 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 397 cttacaggaatggatcttgtcatcatccctgc 428 ||||| |||||||||||||| ||||| ||||| Sbjct: 27133585 cttactggaatggatcttgtgatcattcctgc 27133554
>gb|AF218064.1|AF218064 Nucella lapillus malate dehydrogenase precursor (Mdh) mRNA, Mdh-10 allele, complete cds; nuclear gene for mitochondrial product Length = 1079 Score = 67.9 bits (34), Expect = 3e-08 Identities = 121/150 (80%) Strand = Plus / Plus Query: 208 aaggtggccgtggtgggcgcggccggggggatcggccagtcgctgtcgctgctcatgaag 267 |||||||| ||| |||| ||||| ||||| ||||||||| | ||||| ||||| ||||| Sbjct: 116 aaggtggctgtgctgggggcggcggggggcatcggccagcccctgtccctgctgctgaag 175 Query: 268 atgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgcccggggtcacc 327 || ||||||| ||||| ||| |||| |||||| ||| | ||||||||||||| || Sbjct: 176 gagatcccgctcatctcccacctcaacctgtacgacatcgcccacacgcccggggtggcc 235 Query: 328 gccgacgtcagccacatggacaccagcgcc 357 || ||| |||||||||| || ||| ||||| Sbjct: 236 gctgacctcagccacatcgagacccgcgcc 265
>dbj|AK065955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045C09, full insert sequence Length = 1469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 257 tgctcatgaagatgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgc 316 ||||||||||||||||||| || || || |||||||| || ||||| || |||||||| | Sbjct: 253 tgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaacactc 312 Query: 317 ccggggtcaccgccgacgtcagccacatggacac 350 |||| ||||| || ||| | ||||||||| |||| Sbjct: 313 ccggtgtcacagctgacattagccacatgaacac 346 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 cttacaggaatggatcttgtcatcatccctgc 428 ||||| |||||||||||||| ||||| ||||| Sbjct: 396 cttactggaatggatcttgtgatcattcctgc 427
>dbj|AK061793.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F06, full insert sequence Length = 1299 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 257 tgctcatgaagatgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgc 316 ||||||||||||||||||| || || || |||||||| || ||||| || |||||||| | Sbjct: 230 tgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaacactc 289 Query: 317 ccggggtcaccgccgacgtcagccacatggacac 350 |||| ||||| || ||| | ||||||||| |||| Sbjct: 290 ccggtgtcacagctgacattagccacatgaacac 323 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 cttacaggaatggatcttgtcatcatccctgc 428 ||||| |||||||||||||| ||||| ||||| Sbjct: 373 cttactggaatggatcttgtgatcattcctgc 404
>gb|AY725476.1| Lycopersicon esculentum glyoxisomal malate dehydrogenase (gMDH) mRNA, complete cds; nuclear gene for glyoxisomal product Length = 1074 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 394 gcacttacaggaatggatcttgtcatcatccctgccggcctcccaagaaaaccaggaatg 453 ||||||||||||||||| ||||| ||||| ||||| || | ||||||||||| |||||| Sbjct: 328 gcacttacaggaatggaccttgtgatcatacctgctggtattccaagaaaacctggaatg 387 Query: 454 acaagggatg 463 ||||| |||| Sbjct: 388 acaagagatg 397
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 257 tgctcatgaagatgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgc 316 ||||||||||||||||||| || || || |||||||| || ||||| || |||||||| | Sbjct: 27059884 tgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaacactc 27059825 Query: 317 ccggggtcaccgccgacgtcagccacatggacac 350 |||| ||||| || ||| | ||||||||| |||| Sbjct: 27059824 ccggtgtcacagctgacattagccacatgaacac 27059791 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 397 cttacaggaatggatcttgtcatcatccctgc 428 ||||| |||||||||||||| ||||| ||||| Sbjct: 27059182 cttactggaatggatcttgtgatcattcctgc 27059151
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 257 tgctcatgaagatgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgc 316 ||||||||||||||||||| || || || |||||||| || ||||| || |||||||| | Sbjct: 21950 tgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaacactc 22009 Query: 317 ccggggtcaccgccgacgtcagccacatggacac 350 |||| ||||| || ||| | ||||||||| |||| Sbjct: 22010 ccggtgtcacagctgacattagccacatgaacac 22043 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 cttacaggaatggatcttgtcatcatccctgc 428 ||||| |||||||||||||| ||||| ||||| Sbjct: 22652 cttactggaatggatcttgtgatcattcctgc 22683
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 257 tgctcatgaagatgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgc 316 ||||||||||||||||||| || || || |||||||| || ||||| || |||||||| | Sbjct: 73183 tgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaacactc 73124 Query: 317 ccggggtcaccgccgacgtcagccacatggacac 350 |||| ||||| || ||| | ||||||||| |||| Sbjct: 73123 ccggtgtcacagctgacattagccacatgaacac 73090 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 397 cttacaggaatggatcttgtcatcatccctgc 428 ||||| |||||||||||||| ||||| ||||| Sbjct: 72481 cttactggaatggatcttgtgatcattcctgc 72450
>dbj|D85763.1|RIC12 Oryza sativa (japonica cultivar-group) mRNA for glyoxysomal malate dehydrogenase, complete cds Length = 1332 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 257 tgctcatgaagatgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgc 316 ||||||||||||||||||| || || || |||||||| || ||||| || |||||||| | Sbjct: 243 tgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaacactc 302 Query: 317 ccggggtcaccgccgacgtcagccacatggacac 350 |||| ||||| || ||| | ||||||||| |||| Sbjct: 303 ccggtgtcacagctgacattagccacatgaacac 336 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 cttacaggaatggatcttgtcatcatccctgc 428 ||||| |||||||||||||| ||||| ||||| Sbjct: 386 cttactggaatggatcttgtgatcattcctgc 417
>gb|AY106202.1| Zea mays PCO104294 mRNA sequence Length = 1539 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 262 atgaagatgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgcccggg 321 |||||||||||||| || || || |||||||| || ||||| ||||||||| | || || Sbjct: 395 atgaagatgaaccctcttgtttcggtgctccatctatacgatgtcgtcaacgcacctggt 454 Query: 322 gtcaccgccgacgtcagccacatggacac 350 ||||| |||||| ||||||||||| |||| Sbjct: 455 gtcacagccgacatcagccacatgaacac 483
>gb|BT017838.1| Zea mays clone EL01N0509G03.c mRNA sequence Length = 1337 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 226 gcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctcc 285 ||||| ||||| ||||| ||| |||||||||||||||||||| | ||||| ||||||||| Sbjct: 129 gcggcggggggcatcgggcagccgctgtcgctgctcatgaagctcaacccactcgtctcc 188
>gb|BT016218.1| Zea mays clone Contig51 mRNA sequence Length = 1263 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 226 gcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctcc 285 ||||| ||||| ||||| ||| |||||||||||||||||||| | ||||| ||||||||| Sbjct: 63 gcggcggggggcatcgggcagccgctgtcgctgctcatgaagctcaacccactcgtctcc 122
>ref|NM_192352.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||||||||| || ||||| ||| |||| || || ||||||||| |||||||||||||| Sbjct: 100 ggcgcggccggcggcatcgggcagccgctctccctcctcatgaagctgaacccgctcgtc 159 Query: 283 tcc 285 ||| Sbjct: 160 tcc 162
>gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1257 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||||||||| || ||||| ||| |||| || || ||||||||| |||||||||||||| Sbjct: 116 ggcgcggccggcggcatcgggcagccgctctccctcctcatgaagctgaacccgctcgtc 175 Query: 283 tcc 285 ||| Sbjct: 176 tcc 178
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||||||||| || ||||| ||| |||| || || ||||||||| |||||||||||||| Sbjct: 26184691 ggcgcggccggcggcatcgggcagccgctctccctcctcatgaagctgaacccgctcgtc 26184750 Query: 283 tcc 285 ||| Sbjct: 26184751 tcc 26184753
>dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||||||||| || ||||| ||| |||| || || ||||||||| |||||||||||||| Sbjct: 90108 ggcgcggccggcggcatcgggcagccgctctccctcctcatgaagctgaacccgctcgtc 90167 Query: 283 tcc 285 ||| Sbjct: 90168 tcc 90170
>dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A07, full insert sequence Length = 1279 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||||||||| || ||||| ||| |||| || || ||||||||| |||||||||||||| Sbjct: 158 ggcgcggccggcggcatcgggcagccgctctccctcctcatgaagctgaacccgctcgtc 217 Query: 283 tcc 285 ||| Sbjct: 218 tcc 220
>dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108E15, full insert sequence Length = 1369 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||||||||| || ||||| ||| |||| || || ||||||||| |||||||||||||| Sbjct: 232 ggcgcggccggcggcatcgggcagccgctctccctcctcatgaagctgaacccgctcgtc 291 Query: 283 tcc 285 ||| Sbjct: 292 tcc 294
>dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047B08 Length = 57846 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||||||||| || ||||| ||| |||| || || ||||||||| |||||||||||||| Sbjct: 25821 ggcgcggccggcggcatcgggcagccgctctccctcctcatgaagctgaacccgctcgtc 25880 Query: 283 tcc 285 ||| Sbjct: 25881 tcc 25883
>emb|X78800.1|EGMMDH E.gunnii mRNA for mitochondrial malate dehydrogenase Length = 1375 Score = 60.0 bits (30), Expect = 7e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 208 aaggtggccgtggtgggcgcggccggggggatcggccagtcgctgtcgctgctcatgaag 267 |||||||||||| | ||||| || || |||||||||||| | || | || ||||||||| Sbjct: 166 aaggtggccgtgctcggcgccgcgggcgggatcggccagcccctcgctcttctcatgaag 225 Query: 268 atgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgcccggggtcacc 327 | ||||| ||||||||| |||| ||||||||| ||| | ||| ||||| ||| || Sbjct: 226 ctcaaccctctcgtctcccagctcgccctctacgatatcgccggcactcccggcgtcgcc 285 Query: 328 gccgacgtcagccacatggacaccag 353 ||||||||| ||||||| ||||||| Sbjct: 286 gccgacgtcggccacatcaacaccag 311
>ref|XM_475913.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 226 gcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| || |||||||||||| |||| |||| ||||||||| | |||||||||||||| Sbjct: 100 gcggcgggcgggatcggccagccgctcgcgctcctcatgaagctcaacccgctcgtctc 158
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 226 gcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| || |||||||||||| |||| |||| ||||||||| | |||||||||||||| Sbjct: 185232 gcggcgggcgggatcggccagccgctcgcgctcctcatgaagctcaacccgctcgtctc 185174
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 226 gcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| || |||||||||||| |||| |||| ||||||||| | |||||||||||||| Sbjct: 35914 gcggcgggcgggatcggccagccgctcgcgctcctcatgaagctcaacccgctcgtctc 35856
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 226 gcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| || |||||||||||| |||| |||| ||||||||| | |||||||||||||| Sbjct: 28400990 gcggcgggcgggatcggccagccgctcgcgctcctcatgaagctcaacccgctcgtctc 28400932
>dbj|AK073698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I02, full insert sequence Length = 1303 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 226 gcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| || |||||||||||| |||| |||| ||||||||| | |||||||||||||| Sbjct: 157 gcggcgggcgggatcggccagccgctcgcgctcctcatgaagctcaacccgctcgtctc 215
>emb|AJ242712.1|BNA242712 Brassica napus mdh1 gene for malate dehydrogenase 1 Length = 4773 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 262 atgaagatgaacccgctcgtctccgtgctccacctctacgacgtcgtcaacacgcccggg 321 |||||||||||||| |||||||| | || || |||||||| |||||||| | || || Sbjct: 2850 atgaagatgaaccctctcgtctctttacttcatctctacgatgtcgtcaatgctcctgga 2909 Query: 322 gtcaccgccgacgtcagccacatggacac 350 ||||| || ||||| ||||| |||||||| Sbjct: 2910 gtcactgctgacgttagccatatggacac 2938
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 143 tggaggagggcggcgcggcgctg 165 ||||||||||||||||||||||| Sbjct: 56353 tggaggagggcggcgcggcgctg 56375
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 143 tggaggagggcggcgcggcgctg 165 ||||||||||||||||||||||| Sbjct: 11269995 tggaggagggcggcgcggcgctg 11270017
>gb|L31900.1|CUSMDHG Cucumis sativus glyoxysomal malate dehydrogenase (mdhG) mRNA, complete cds Length = 1285 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 397 cttacaggaatggatcttgtcatcatccctgccggcctcccaagaaaaccaggaatgaca 456 ||||| || ||||||||||| | |||||||| ||| | || | ||||||||||||||| Sbjct: 375 cttactggcatggatcttgttgtaatccctgcgggcgttcctcggaaaccaggaatgaca 434 Query: 457 agggatg 463 ||||||| Sbjct: 435 agggatg 441
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 143 tggaggagggcggcgcggcgctg 165 ||||||||||||||||||||||| Sbjct: 11349184 tggaggagggcggcgcggcgctg 11349206
>gb|BT016719.1| Zea mays clone Contig552 mRNA sequence Length = 1581 Score = 44.1 bits (22), Expect = 0.40 Identities = 64/78 (82%) Strand = Plus / Plus Query: 208 aaggtggccgtggtgggcgcggccggggggatcggccagtcgctgtcgctgctcatgaag 267 ||||||||| | ||||||| || || || ||||| ||| |||| || || ||||||||| Sbjct: 251 aaggtggccatcctgggcgctgcgggcggcatcgggcagccgctctccctcctcatgaag 310 Query: 268 atgaacccgctcgtctcc 285 | ||||||||||||||| Sbjct: 311 ctcaacccgctcgtctcc 328
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cggccagtcgctgtcgctgctcatga 265 |||||||||||||||||||| ||||| Sbjct: 3653476 cggccagtcgctgtcgctgcccatga 3653501
>ref|XM_846012.1| PREDICTED: Canis familiaris similar to malate dehydrogenase, mitochondrial (LOC608877), mRNA Length = 1303 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 434 tcccaagaaaaccaggaatgacaagggatg 463 |||||||||||||||| |||||| |||||| Sbjct: 398 tcccaagaaaaccaggcatgacacgggatg 427
>ref|XM_539718.2| PREDICTED: Canis familiaris similar to malate dehydrogenase 2, NAD (mitochondrial) (LOC482601), mRNA Length = 1175 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 434 tcccaagaaaaccaggaatgacaagggatg 463 |||||||||||||||| |||||| |||||| Sbjct: 275 tcccaagaaaaccaggcatgacacgggatg 304
>ref|XM_844851.1| PREDICTED: Canis familiaris similar to malate dehydrogenase, mitochondrial (LOC482945), mRNA Length = 1299 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 434 tcccaagaaaaccaggaatgacaagggatg 463 |||||||||||||||| |||||| |||||| Sbjct: 407 tcccaagaaaaccaggcatgacacgggatg 436
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cggccagtcgctgtcgctgctcatga 265 |||||||||||||||||||| ||||| Sbjct: 190913 cggccagtcgctgtcgctgcccatga 190938
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cggccagtcgctgtcgctgctcatga 265 |||||||||||||||||||| ||||| Sbjct: 170164 cggccagtcgctgtcgctgcccatga 170189
>gb|AY103861.1| Zea mays PCO062153 mRNA sequence Length = 1633 Score = 44.1 bits (22), Expect = 0.40 Identities = 64/78 (82%) Strand = Plus / Plus Query: 208 aaggtggccgtggtgggcgcggccggggggatcggccagtcgctgtcgctgctcatgaag 267 ||||||||| | ||||||| || || || ||||| ||| |||| || || ||||||||| Sbjct: 250 aaggtggccatcctgggcgctgcgggcggcatcgggcagccgctctccctcctcatgaag 309 Query: 268 atgaacccgctcgtctcc 285 | ||||||||||||||| Sbjct: 310 ctcaacccgctcgtctcc 327
>ref|XM_507398.1| PREDICTED Oryza sativa (japonica cultivar-group), P0011H09.138 mRNA Length = 1480 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 451 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 510 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 511 tcggcgctgcacctgtacgac 531
>ref|XM_507397.1| PREDICTED Oryza sativa (japonica cultivar-group), P0011H09.138 mRNA Length = 1834 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 805 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 864 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 865 tcggcgctgcacctgtacgac 885
>ref|NM_193082.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1331 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 302 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 361 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 362 tcggcgctgcacctgtacgac 382
>ref|XM_506491.2| PREDICTED Oryza sativa (japonica cultivar-group), P0011H09.138 mRNA Length = 1611 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 338 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 397 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 398 tcggcgctgcacctgtacgac 418
>ref|XM_847710.1| PREDICTED: Canis familiaris similar to Malate dehydrogenase, mitochondrial precursor (LOC610258), mRNA Length = 738 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 435 cccaagaaaaccaggaatgacaagggatg 463 ||||||||||||||| |||||| |||||| Sbjct: 180 cccaagaaaaccaggcatgacacgggatg 208
>gb|AY326794.1| Chlamydomonas reinhardtii putative phosphate/phosphoenolpyruvate translocator precursor (PPT2) mRNA, complete cds; nuclear gene for plastid product Length = 2235 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 141 gatggaggagggcggcgcggcgctg 165 ||||| ||||||||||||||||||| Sbjct: 927 gatggtggagggcggcgcggcgctg 951
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 158 cggcgctgaggcccgcggcgtgccgcgcc 186 |||||| ||||||||||||| |||||||| Sbjct: 2861592 cggcgccgaggcccgcggcgagccgcgcc 2861620
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Minus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 26101518 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 26101459 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 26101458 tcggcgctgcacctgtacgac 26101438
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Minus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 135080 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 135021 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 135020 tcggcgctgcacctgtacgac 135000
>dbj|AK106083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A10, full insert sequence Length = 1331 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 302 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 361 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 362 tcggcgctgcacctgtacgac 382
>dbj|AK071297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084J02, full insert sequence Length = 1611 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 337 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 396 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 397 tcggcgctgcacctgtacgac 417
>dbj|AK068064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130E16, full insert sequence Length = 1834 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 805 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 864 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 865 tcggcgctgcacctgtacgac 885
>dbj|AK059570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A01, full insert sequence Length = 1480 Score = 42.1 bits (21), Expect = 1.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 223 ggcgcggccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtc 282 ||||| ||||| |||||||| ||| |||| ||||| ||| | |||||| ||||||||| Sbjct: 451 ggcgccgccggtgggatcgggcagccgctctcgctcctcgtcaagatgtcgccgctcgtc 510 Query: 283 tccgtgctccacctctacgac 303 || | ||| ||||| |||||| Sbjct: 511 tcggcgctgcacctgtacgac 531
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 ctgctcatgaagatgaacccg 276 ||||||||||||||||||||| Sbjct: 93442 ctgctcatgaagatgaacccg 93422
>ref|NM_112364.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT3G15020 mRNA, complete cds Length = 1396 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 229 gccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| |||||||||||| | || || || ||||||||| | ||||| |||||||| Sbjct: 175 gccggtgggatcggccagccactttctcttctcatgaagcttaaccctctcgtctc 230
>ref|XM_463196.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1872 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgcaccgcatcgcccgcgtcgccg 115 |||||||| ||||||||||||||| Sbjct: 419 cgcaccgcgtcgcccgcgtcgccg 442
>ref|XM_516329.1| PREDICTED: Pan troglodytes similar to nuclear receptor subfamily 1, group D, member 2; Rev-erb-beta (LOC460229), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gggcggcgcggcgctgaggc 169 |||||||||||||||||||| Sbjct: 253 gggcggcgcggcgctgaggc 272
>gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete sequence Length = 199043 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atcggccagtcgctgtcgctgctc 261 ||||||||| |||||||||||||| Sbjct: 45711 atcggccagccgctgtcgctgctc 45734
>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence Length = 151609 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atcggccagtcgctgtcgctgctc 261 ||||||||| |||||||||||||| Sbjct: 125781 atcggccagccgctgtcgctgctc 125804
>ref|XM_366841.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02917.4) partial mRNA Length = 3225 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 gccggcctcccaagaaaacc 446 |||||||||||||||||||| Sbjct: 2208 gccggcctcccaagaaaacc 2189
>ref|XM_676322.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8145.2), mRNA Length = 513 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gcgcggcgctgaggcccgcg 174 |||||||||||||||||||| Sbjct: 31 gcgcggcgctgaggcccgcg 12
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 cgcatcgcccgcgtcgccgc 116 |||||||||||||||||||| Sbjct: 3386393 cgcatcgcccgcgtcgccgc 3386412
>gb|AC009119.10| Homo sapiens chromosome 16 clone RP11-483P21, complete sequence Length = 181020 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gcgccccggggttcaaggtggccg 217 ||||||||||| |||||||||||| Sbjct: 37788 gcgccccgggggtcaaggtggccg 37765
>gb|AC129492.6| Homo sapiens chromosome 17, clone RP11-599B13, complete sequence Length = 196037 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tggtgggcgcggccgggggg 237 |||||||||||||||||||| Sbjct: 146307 tggtgggcgcggccgggggg 146326
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gtggccgtggtgggcgcggc 230 |||||||||||||||||||| Sbjct: 1547964 gtggccgtggtgggcgcggc 1547945
>gb|AC124914.3| Homo sapiens chromosome 3 clone RP11-146K16, complete sequence Length = 187803 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gggcggcgcggcgctgaggc 169 |||||||||||||||||||| Sbjct: 90672 gggcggcgcggcgctgaggc 90691
>emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 on chromosome 20p11.22-12.1 Contains STSs and GSSs, complete sequence Length = 143712 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 cctcccaagaaaaccaggaa 451 |||||||||||||||||||| Sbjct: 117255 cctcccaagaaaaccaggaa 117236
>gb|BC045613.1| Homo sapiens nuclear receptor subfamily 1, group D, member 2, mRNA (cDNA clone MGC:33914 IMAGE:5274113), complete cds Length = 4349 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gggcggcgcggcgctgaggc 169 |||||||||||||||||||| Sbjct: 184 gggcggcgcggcgctgaggc 203
>gb|BC070035.1| Homo sapiens nuclear receptor subfamily 1, group D, member 2, mRNA (cDNA clone MGC:87005 IMAGE:4373827), complete cds Length = 4387 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gggcggcgcggcgctgaggc 169 |||||||||||||||||||| Sbjct: 123 gggcggcgcggcgctgaggc 142
>gb|AC104762.7| Homo sapiens chromosome 17, clone RP11-769H22, complete sequence Length = 162678 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tggtgggcgcggccgggggg 237 |||||||||||||||||||| Sbjct: 146307 tggtgggcgcggccgggggg 146326
>dbj|AB030817.1| Homo sapiens hper1 gene for period1, complete cds Length = 16682 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tggtgggcgcggccgggggg 237 |||||||||||||||||||| Sbjct: 5846 tggtgggcgcggccgggggg 5827
>dbj|AB161423.1| Flavobacterium frigidimaris gene for malate dehydrogenase, complete cds Length = 936 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ccaagaaaaccaggaatgac 455 |||||||||||||||||||| Sbjct: 241 ccaagaaaaccaggaatgac 260
>gb|AY119152.1| Drosophila melanogaster RE60471 full insert cDNA Length = 1328 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atcggccagtcgctgtcgctgctc 261 ||||||||| |||||||||||||| Sbjct: 208 atcggccagccgctgtcgctgctc 231
>gb|AC098838.3| Genomic sequence for Mus musculus, clone RP23-27N1, from chromosome 17, complete sequence Length = 254336 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ccgtggtgggcgcggccggg 234 |||||||||||||||||||| Sbjct: 54080 ccgtggtgggcgcggccggg 54061
>emb|CR602304.1| full-length cDNA clone CS0DD005YN11 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 2076 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gggcggcgcggcgctgaggc 169 |||||||||||||||||||| Sbjct: 166 gggcggcgcggcgctgaggc 185
>ref|NM_142439.1| Drosophila melanogaster CG7998-RA (CG7998), mRNA Length = 1328 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atcggccagtcgctgtcgctgctc 261 ||||||||| |||||||||||||| Sbjct: 216 atcggccagccgctgtcgctgctc 239
>gb|AY093788.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds Length = 1026 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 229 gccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| |||||||||||| | || || || ||||||||| | ||||| |||||||| Sbjct: 112 gccggtgggatcggccagccactttctcttctcatgaagcttaaccctctcgtctc 167
>ref|NM_005126.2| Homo sapiens nuclear receptor subfamily 1, group D, member 2 (NR1D2), mRNA Length = 4349 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gggcggcgcggcgctgaggc 169 |||||||||||||||||||| Sbjct: 184 gggcggcgcggcgctgaggc 203
>gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, complete sequence Length = 193790 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gcgccccggggttcaaggtggccg 217 ||||||||||| |||||||||||| Sbjct: 100948 gcgccccgggggtcaaggtggccg 100925
>gb|AY045592.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds Length = 1396 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 229 gccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| |||||||||||| | || || || ||||||||| | ||||| |||||||| Sbjct: 175 gccggtgggatcggccagccactttctcttctcatgaagcttaaccctctcgtctc 230
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tcgcccgcgtcgccgcgcacctca 124 ||||| |||||||||||||||||| Sbjct: 1190276 tcgccggcgtcgccgcgcacctca 1190299
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggagggcggcgcggcgc 163 |||||||||||||||||||| Sbjct: 16104511 ggaggagggcggcgcggcgc 16104492
>gb|AC009257.3|AC009257 Drosophila melanogaster, chromosome 2R, region 59D-59E, BAC clone BACR25I01, complete sequence Length = 218565 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cctccccctcgcaccgcatc 102 |||||||||||||||||||| Sbjct: 205617 cctccccctcgcaccgcatc 205598
>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone BACR48M01, complete sequence Length = 188272 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cctccccctcgcaccgcatc 102 |||||||||||||||||||| Sbjct: 60923 cctccccctcgcaccgcatc 60904
>gb|AC087549.2|AC087549 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0039C14, complete sequence Length = 135098 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggagggcggcgcggcgc 163 |||||||||||||||||||| Sbjct: 119616 ggaggagggcggcgcggcgc 119597
>gb|AC012320.6|AC012320 Homo sapiens chromosome 16 clone RP11-280N16, complete sequence Length = 189840 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gcgccccggggttcaaggtggccg 217 ||||||||||| |||||||||||| Sbjct: 159290 gcgccccgggggtcaaggtggccg 159267
>emb|BX824867.1|CNS0A5NF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1302 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 229 gccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| |||||||||||| | || || || ||||||||| | ||||| |||||||| Sbjct: 153 gccggtgggatcggccagccactttctcttctcatgaagcttaaccctctcgtctc 208
>emb|BX824034.1|CNS0A5H3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1232 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 229 gccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| |||||||||||| | || || || ||||||||| | ||||| |||||||| Sbjct: 160 gccggtgggatcggccagccactttctcttctcatgaagcttaaccctctcgtctc 215
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 cgcaccgcatcgcccgcgtcgccg 115 |||||||| ||||||||||||||| Sbjct: 37263 cgcaccgcgtcgcccgcgtcgccg 37240
>gb|AY089112.1| Arabidopsis thaliana clone 34499 mRNA, complete sequence Length = 1302 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 229 gccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| |||||||||||| | || || || ||||||||| | ||||| |||||||| Sbjct: 175 gccggtgggatcggccagccactttctcttctcatgaagcttaaccctctcgtctc 230
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 cacgcccggggtcaccgccgacgt 335 |||| ||||||||||||||||||| Sbjct: 3317346 cacggccggggtcaccgccgacgt 3317323 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tggaggagggcggcgcggcg 162 |||||||||||||||||||| Sbjct: 974689 tggaggagggcggcgcggcg 974708
>gb|AC130329.8| Homo sapiens chromosome 17, clone RP13-348C17, complete sequence Length = 74378 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tggtgggcgcggccgggggg 237 |||||||||||||||||||| Sbjct: 31993 tggtgggcgcggccgggggg 31974
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 catcgcccgcgtcgccgcgcacct 122 ||||| |||||||||||||||||| Sbjct: 2511523 catcgaccgcgtcgccgcgcacct 2511546
>emb|AL672015.7| Mouse DNA sequence from clone RP23-154O12 on chromosome X, complete sequence Length = 194287 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 gatcttgtcatcatccctgc 428 |||||||||||||||||||| Sbjct: 179036 gatcttgtcatcatccctgc 179055
>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2 Length = 79279 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 229 gccggggggatcggccagtcgctgtcgctgctcatgaagatgaacccgctcgtctc 284 ||||| |||||||||||| | || || || ||||||||| | ||||| |||||||| Sbjct: 52282 gccggtgggatcggccagccactttctcttctcatgaagcttaaccctctcgtctc 52337
>emb|AJ326124.1|HSA326124 Homo sapiens genomic sequence surrounding NotI site, clone NL1-BH17C Length = 665 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gcgccccggggttcaaggtggccg 217 ||||||||||| |||||||||||| Sbjct: 84 gcgccccgggggtcaaggtggccg 61
>emb|AJ332077.1|HSA332077 Homo sapiens genomic sequence surrounding NotI site, clone NR5-H4RS Length = 745 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gcgccccggggttcaaggtggccg 217 ||||||||||| |||||||||||| Sbjct: 84 gcgccccgggggtcaaggtggccg 61
>dbj|AK071474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097B21, full insert sequence Length = 2066 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgcaccgcatcgcccgcgtcgccg 115 |||||||| ||||||||||||||| Sbjct: 488 cgcaccgcgtcgcccgcgtcgccg 511
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete sequence Length = 224889 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atcggccagtcgctgtcgctgctc 261 ||||||||| |||||||||||||| Sbjct: 66205 atcggccagccgctgtcgctgctc 66228
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cctccccctcgcaccgcatc 102 |||||||||||||||||||| Sbjct: 94463 cctccccctcgcaccgcatc 94444
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 ccgcatcgcccgcgtcgccgcgca 119 ||||||||||||||||| |||||| Sbjct: 1827489 ccgcatcgcccgcgtcgtcgcgca 1827512 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tggaggagggcggcgcggcg 162 |||||||||||||||||||| Sbjct: 1461235 tggaggagggcggcgcggcg 1461254
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 accgcatcgcccgcgtcgccgcgc 118 ||||||||||||||| |||||||| Sbjct: 3449764 accgcatcgcccgcgacgccgcgc 3449787
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 caacacgcccggggtcaccg 328 |||||||||||||||||||| Sbjct: 4583101 caacacgcccggggtcaccg 4583120
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggagggcggcgcggcgc 163 |||||||||||||||||||| Sbjct: 16112752 ggaggagggcggcgcggcgc 16112733
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 caaggtggccgtggtgggcg 226 |||||||||||||||||||| Sbjct: 1457305 caaggtggccgtggtgggcg 1457286
>emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete sequence Length = 213391 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 caagaaaaccaggaatgaca 456 |||||||||||||||||||| Sbjct: 131758 caagaaaaccaggaatgaca 131739
>gb|M33148.1|CNAGMDHA C.vulgaris glyoxysomal malate dehydrogenase mRNA, complete cds Length = 1334 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 gaaaaccaggaatgacaagggatg 463 |||||||||||||||| ||||||| Sbjct: 440 gaaaaccaggaatgacgagggatg 463
>gb|M18278.1|PSEACYII Pseudomonas sp. cephalosporin acylase (acyII) gene, complete cds Length = 3141 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cgcggcgctgaggcccgcgg 175 |||||||||||||||||||| Sbjct: 1203 cgcggcgctgaggcccgcgg 1222
>dbj|D16815.1| Homo sapiens mRNA for EAR-1r, complete cds Length = 2147 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gggcggcgcggcgctgaggc 169 |||||||||||||||||||| Sbjct: 220 gggcggcgcggcgctgaggc 239 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,317,950 Number of Sequences: 3902068 Number of extensions: 3317950 Number of successful extensions: 65393 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 63263 Number of HSP's gapped (non-prelim): 2132 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)