ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet40g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 75 4e-14
2CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 57 1e-08
3CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 55 4e-08
4CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch... 55 6e-08
5CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch... 53 2e-07
6CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop... 53 2e-07
7CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo... 48 7e-06
8LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 45 6e-05
9CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29 45 6e-05
10CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 44 1e-04
11CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo... 44 1e-04
12CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo... 43 2e-04
13LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 41 8e-04
14CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 39 0.003
15CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 35 0.036
16CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 35 0.061
17CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 35 0.061
18CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 34 0.079
19CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 33 0.18
20CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 33 0.23
21CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 33 0.23
22CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 32 0.30
23CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 32 0.30
24CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 32 0.30
25CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 32 0.30
26CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 32 0.30
27CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 32 0.30
28CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 32 0.30
29CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 32 0.30
30CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 32 0.30
31CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 32 0.30
32CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 32 0.30
33CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 32 0.30
34CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 32 0.30
35CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 32 0.30
36CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 32 0.30
37CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 32 0.30
38CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 32 0.30
39CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 32 0.30
40CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 32 0.30
41CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 32 0.30
42CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 32 0.30
43CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 32 0.39
44CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 32 0.51
45CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 31 0.67
46CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 31 0.67
47CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 31 0.67
48CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 31 0.67
49CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 31 0.67
50CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 31 0.67
51CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 31 0.67
52CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 31 0.88
53CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 31 0.88
54CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 31 0.88
55CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 30 1.1
56CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 30 1.1
57CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 30 1.1
58CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 30 1.1
59CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 30 1.1
60CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 30 1.1
61CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 30 1.1
62CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 30 1.1
63CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 30 1.1
64CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 30 1.1
65CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 30 1.1
66CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 29 2.5
67CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 29 2.5
68CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 29 3.3
69CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 28 4.3
70MA1C1_HUMAN (Q9NR34) Mannosyl-oligosaccharide 1,2-alpha-mannosid... 28 4.3
71NU3M_ORNAN (Q36456) NADH-ubiquinone oxidoreductase chain 3 (EC 1... 28 5.7
72DOPO_HUMAN (P09172) Dopamine beta-hydroxylase precursor (EC 1.14... 28 7.4
73Y1401_HALSA (Q9HPZ6) UPF0179 protein Vng1401c 27 9.7
74NU3M_MACRO (P92666) NADH-ubiquinone oxidoreductase chain 3 (EC 1... 27 9.7
75NU3M_DIDMA (P41306) NADH-ubiquinone oxidoreductase chain 3 (EC 1... 27 9.7 
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 38/68 (55%), Positives = 42/68 (61%), Gaps = 9/68 (13%)
 Frame = +2

Query: 158 GDSGR---------VGLAKSTRRDVAVQAKGSWLPGLQSPAYLDGSLAGDNGFDPLALAE 310
           G SGR         +G +  T        KG WLPGL SP YL GSLAGDNGFDPL LAE
Sbjct: 25  GSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAE 84

Query: 311 DPEDLRWF 334
           DPE+L+WF
Sbjct: 85  DPENLKWF 92
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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 24/35 (68%), Positives = 25/35 (71%)
 Frame = +2

Query: 227 WLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDLRW 331
           W PG   P +LDGSL GD GFDPL LA DPE LRW
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW 102
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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 27/51 (52%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
 Frame = +2

Query: 197 RDVAVQAKGS------WLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDLRW 331
           R VAV A  +      W PG   P +LDGSL GD GFDPL L  DPE L+W
Sbjct: 52  RSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKW 102
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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
 Frame = +2

Query: 164 SGRVGLAKSTRRD--VAVQAKGSWLPGLQS------PAYLDGSLAGDNGFDPLALAEDPE 319
           + RVG A + +R   +A  AK SW+P ++       P +LDGSL GD GFDPL L +DP 
Sbjct: 32  AARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 320 DLRWF 334
            L+W+
Sbjct: 92  FLKWY 96
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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
 Frame = +2

Query: 206 AVQAKGSWLPGLQS------PAYLDGSLAGDNGFDPLALAEDPEDLRWF 334
           AV  K SW+P ++S      P +LDGSL GD GFDPL L +DP  L+W+
Sbjct: 48  AVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWY 96
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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
 Frame = +2

Query: 152 FLGDSGRVGLAKSTRRDVAVQA----KGSWLPGLQS------PAYLDGSLAGDNGFDPLA 301
           F+      G++ ++R+ V V A    K SW+P ++       P +LDGSL GD GFDPL 
Sbjct: 31  FVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLG 90

Query: 302 LAEDPEDLRWF 334
           L +DP  L+W+
Sbjct: 91  LGKDPAFLKWY 101
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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 21/50 (42%), Positives = 28/50 (56%)
 Frame = +2

Query: 182 AKSTRRDVAVQAKGSWLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDLRW 331
           A   +    +  +  W PG +SP YLDGSL GD GFDP  L +  E L++
Sbjct: 40  ASPKKAKTVISDRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQF 89
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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = +2

Query: 221 GSWLPGLQSPAYLDGSLAGDNGFDPLALAEDP 316
           G W PG Q PA+L G    D GFDPL++A DP
Sbjct: 160 GVWFPGAQPPAHLTGEYPADRGFDPLSVAADP 191
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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 24/52 (46%), Positives = 27/52 (51%)
 Frame = +2

Query: 164 SGRVGLAKSTRRDVAVQAKGSWLPGLQSPAYLDGSLAGDNGFDPLALAEDPE 319
           SG VG  K        Q    WLP    P +LDGSL GD GFDPL L++  E
Sbjct: 38  SGGVGYRK-------YQGDALWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSE 82
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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = +2

Query: 227 WLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDL 325
           W+PG   P+YLDGS  GD GFD L L E P +L
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANL 81
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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = +2

Query: 185 KSTRRDVAVQAKGSWLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDLRW 331
           KS ++ V    +  W PG  SP +LDGSL GD GFDP  L +  E L++
Sbjct: 45  KSAKKTVTTD-RPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQF 92
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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 227 WLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDLRW 331
           W PG   P +LDGS+ GD GFDP  L +  E L++
Sbjct: 59  WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQY 93
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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +2

Query: 221 GSWLPGLQSPAYLDGSLAGDNGFDPLALAEDPE 319
           G W P  + PA L G    D GFDPL LA DP+
Sbjct: 188 GLWFPNAEPPALLTGEYPADRGFDPLNLAADPD 220



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 206 AVQAKGSWLPGLQSPAYLDGSLAGDNGFDPLALAEDP 316
           A + +  W P +  P YL G   GD GFDP  LA DP
Sbjct: 367 AKEERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADP 403



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 227 WLPGLQSPAYLDGSLAGDNGFDPLALAEDPE 319
           W P   +P++L+G   GD GFDP  LA DP+
Sbjct: 5   WFPNTLAPSWLNGEYYGDRGFDPAGLAADPD 35
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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 19/31 (61%), Positives = 21/31 (67%)
 Frame = +2

Query: 227 WLPGLQSPAYLDGSLAGDNGFDPLALAEDPE 319
           W    QS +YLDG L GD GFDPL L+ DPE
Sbjct: 56  WFASKQSLSYLDGRLPGDFGFDPLGLS-DPE 85
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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
 Frame = +2

Query: 167 GRVGLAKSTRRDVAVQAKGSWLP----------GLQSPAYLDGSLAGDNGFDPLALAEDP 316
           GR+ + K+  +   VQ+   W              +SP+YL G   GD G+D   L+ DP
Sbjct: 31  GRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90

Query: 317 E 319
           E
Sbjct: 91  E 91
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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 17/73 (23%)
 Frame = +2

Query: 152 FLGDSGRVGLAKSTRRDVAVQAKGSWLPG-----------------LQSPAYLDGSLAGD 280
           FL   GR   A S  RD+A    G    G                  Q+P+YL+G   GD
Sbjct: 19  FLSGQGRAASA-SPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGD 77

Query: 281 NGFDPLALAEDPE 319
            G+D   L+ DPE
Sbjct: 78  YGWDTAGLSADPE 90
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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 248 PAYLDGSLAGDNGFDPLALAEDPED 322
           P YL+G +AGD G+DP  L + PE+
Sbjct: 82  PEYLNGEVAGDYGYDPFGLGKKPEN 106
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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 34.3 bits (77), Expect = 0.079
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           ++P+YL+G  AGD G+D   L+ DPE
Sbjct: 67  ETPSYLNGEFAGDYGWDTAGLSSDPE 92
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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           Q+P+YL+G   GD G+D   L+ DPE
Sbjct: 62  QTPSYLNGEFPGDYGWDTAGLSADPE 87
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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
 Frame = +2

Query: 164 SGRVGLAKSTRRDVAVQAKGSWLP----------GLQSPAYLDGSLAGDNGFDPLALAED 313
           +G+V + K+  +   V +   W              +SP+YL G   GD G+D   L+ D
Sbjct: 30  NGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSAD 89

Query: 314 PE 319
           PE
Sbjct: 90  PE 91
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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
 Frame = +2

Query: 164 SGRVGLAKSTRRDVAVQA------KGSWLPGL--QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +GRV + K+  + VA  +      +  +L     +SP+YL G   GD G+D   L+ DPE
Sbjct: 30  NGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 67  ESPSYLTGEFPGDYGWDTAGLSADPE 92
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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           Q+P+YL G   GD G+D   L+ DPE
Sbjct: 36  QTPSYLTGEFPGDYGWDTAGLSADPE 61
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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 64  ESPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           Q+P+YL G   GD G+D   L+ DPE
Sbjct: 64  QTPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 65  ESPSYLTGEFPGDYGWDTAGLSADPE 90
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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           Q+P+YL G   GD G+D   L+ DPE
Sbjct: 64  QTPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           Q+P+YL G   GD G+D   L+ DPE
Sbjct: 64  QTPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 68  ESPSYLTGEFPGDYGWDTAGLSADPE 93
to top
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
 Frame = +2

Query: 155 LGDSGRVGLAKSTRRDVAVQAKGSW-----------LPGLQSPAYLDGSLAGDNGFDPLA 301
           +GD+ RV + K+  +   V +   W           L G + P+YL G   GD G+D   
Sbjct: 27  IGDA-RVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSG-EPPSYLTGEFPGDYGWDTAG 84

Query: 302 LAEDPE 319
           L+ DPE
Sbjct: 85  LSADPE 90
to top
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 65  ESPSYLTGEFPGDYGWDTAGLSADPE 90
to top
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 66  ESPSYLTGEFPGDYGWDTAGLSADPE 91
to top
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 66  ESPSYLTGEFPGDYGWDTAGLSADPE 91
to top
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 66  ESPSYLTGEFPGDYGWDTAGLSADPE 91
to top
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 65  ESPSYLTGEFPGDYGWDTAGLSADPE 90
to top
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 65  ESPSYLTGEFPGDYGWDTAGLSADPE 90
to top
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 27  ESPSYLTGEFPGDYGWDTAGLSADPE 52
to top
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           Q+P+YL G   GD G+D   L+ DPE
Sbjct: 62  QTPSYLTGEFPGDYGWDTAGLSADPE 87
to top
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           +SP+YL G   GD G+D   L+ DPE
Sbjct: 63  ESPSYLTGEFPGDYGWDTAGLSADPE 88
to top
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           Q+P+YL G   GD G+D   L+ DPE
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPE 88
to top
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 KGSWLP--GLQSPAYLDGSLAGDNGFDPLALAEDPEDLR 328
           +  WL      +PAYL G   GD G+D   L+ DPE  +
Sbjct: 44  RAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFK 82
to top
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           Q+P+YL G   GD G+D   L+ DPE
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPE 88
to top
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 245 SPAYLDGSLAGDNGFDPLALAEDPEDLR 328
           +PAYL G   GD G+D   L+ DPE  +
Sbjct: 53  TPAYLTGEFPGDYGWDTAGLSADPETFK 80
to top
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 11/67 (16%)
 Frame = +2

Query: 152 FLGDSGRVGLAKST-RRDVAVQAKGSWLP----------GLQSPAYLDGSLAGDNGFDPL 298
           F+   G  G A+ T RR V    +  W              Q P+YL G   GD G+D  
Sbjct: 23  FIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTA 82

Query: 299 ALAEDPE 319
            L+ DPE
Sbjct: 83  GLSADPE 89
to top
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           ++P+YL G   GD G+D   L+ DPE
Sbjct: 66  EAPSYLTGEFPGDYGWDTAGLSADPE 91
to top
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           ++P+YL G   GD G+D   L+ DPE
Sbjct: 65  EAPSYLTGEFPGDYGWDTAGLSADPE 90
to top
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           ++P+YL G   GD G+D   L+ DPE
Sbjct: 66  EAPSYLTGEFPGDYGWDTAGLSADPE 91
to top
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 11/62 (17%)
 Frame = +2

Query: 167 GRVGLAKSTRRDVAVQAKGSW-----------LPGLQSPAYLDGSLAGDNGFDPLALAED 313
           GR+ + KS  +     +   W           L G + P+YL G   GD G+D   L+ D
Sbjct: 25  GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSG-EPPSYLTGEFPGDYGWDTAGLSAD 83

Query: 314 PE 319
           PE
Sbjct: 84  PE 85
to top
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 16/68 (23%)
 Frame = +2

Query: 164 SGRVGLAKSTRRDVAVQAKGSWLPGL----------------QSPAYLDGSLAGDNGFDP 295
           S   G A+ T R  A +AK +   G                 + P+YL G   GD G+D 
Sbjct: 22  SSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81

Query: 296 LALAEDPE 319
             L+ DPE
Sbjct: 82  AGLSADPE 89
to top
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           Q P+YL G   GD G+D   L+ DPE
Sbjct: 64  QIPSYLTGEFPGDYGWDTAGLSADPE 89
to top
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           ++P+YL G   GD G+D   L+ DPE
Sbjct: 63  EAPSYLTGEFPGDYGWDTAGLSADPE 88
to top
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           ++P+YL G   GD G+D   L+ DPE
Sbjct: 66  EAPSYLTGEFPGDYGWDTAELSADPE 91
to top
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 245 SPAYLDGSLAGDNGFDPLALAEDPE 319
           +P+YL G   GD G+D  A++ DPE
Sbjct: 66  TPSYLTGEFPGDYGWDTAAVSADPE 90
to top
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPED 322
           + P+YL G   GD G+D   L+ DPE+
Sbjct: 73  EPPSYLTGEFPGDYGWDTAGLSADPEN 99
to top
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 64  EPPSYLTGEFPGDYGWDTAGLSADPE 89
to top
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 248 PAYLDGSLAGDNGFDPLALAEDPE 319
           P+YL G   GD G+D   L+ DPE
Sbjct: 66  PSYLSGEFPGDYGWDTAGLSADPE 89
to top
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 64  EPPSYLTGEFPGDYGWDTAGLSADPE 89
to top
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 64  EPPSYLTGEFPGDYGWDTAGLSADPE 89
to top
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 54  EPPSYLTGEFPGDYGWDTAGLSADPE 79
to top
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 77  EPPSYLTGEFPGDYGWDTAGLSADPE 102
to top
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 77  EPPSYLTGEFPGDYGWDTAGLSADPE 102
to top
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 61  EPPSYLTGEFPGDYGWDTAGLSADPE 86
to top
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 62  EPPSYLTGEFPGDYGWDTAGLSADPE 87
to top
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 44  EPPSYLTGEFPGDYGWDTAGLSADPE 69



 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 221 GSWLPGLQSPAYLDGSLAGDNGFDPLALAEDPE 319
           G  L  +  P Y  GS      FDPLALA+DPE
Sbjct: 158 GGPLGEVTDPIYPGGS------FDPLALADDPE 184
to top
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           + P+YL G   GD G+D   L+ DPE
Sbjct: 5   EPPSYLTGEFPGDYGWDTAGLSADPE 30
to top
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDP 316
           ++P+YL G   GD G+D   L+ DP
Sbjct: 65  EAPSYLTGEFPGDYGWDTAGLSADP 89
to top
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 248 PAYLDGSLAGDNGFDPLALAEDPE 319
           P+YL G   GD G+D   L+ DPE
Sbjct: 65  PSYLTGEFPGDYGWDTEGLSADPE 88
to top
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 242 QSPAYLDGSLAGDNGFDPLALAEDPE 319
           ++P+YL G    D G+D   L+ DPE
Sbjct: 66  EAPSYLTGEFPSDYGWDTAGLSADPE 91
to top
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 245 SPAYLDGSLAGDNGFDPLALAEDPE 319
           +P YL G   GD G+D   L+ DP+
Sbjct: 50  TPEYLTGEFPGDYGWDTAGLSADPQ 74
to top
>MA1C1_HUMAN (Q9NR34) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC (EC|
           3.2.1.113) (Processing alpha-1,2-mannosidase IC)
           (Alpha-1,2-mannosidase IC) (Mannosidase alpha class 1C
           member 1) (HMIC)
          Length = 630

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 237 PGSQDPLAWTATSRRVDLASPTRPESPR 154
           PG  DP +W +  RR      TRP  PR
Sbjct: 91  PGEDDPSSWASPRRRKGGLRRTRPTGPR 118
to top
>NU3M_ORNAN (Q36456) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 115

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 227 WLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDLRWF 334
           WLP L +  YL+ S   + GFDPL  A  P  +++F
Sbjct: 23  WLPQLYT--YLEKSSPYECGFDPLGSARLPFSMKFF 56
to top
>DOPO_HUMAN (P09172) Dopamine beta-hydroxylase precursor (EC 1.14.17.1)|
           (Dopamine beta-monooxygenase)
          Length = 603

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 79  EDVVGQCPRSRGRSPAG 129
           E+   QCP S+GRSPAG
Sbjct: 576 EEPTPQCPTSQGRSPAG 592
to top
>Y1401_HALSA (Q9HPZ6) UPF0179 protein Vng1401c|
          Length = 148

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +2

Query: 8   GEPPHTHA---RTLTLLPYAPSSQ 70
           GEPPH H    R LTL+ +AP+ +
Sbjct: 125 GEPPHDHCALDRDLTLVEFAPAER 148
to top
>NU3M_MACRO (P92666) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 227 WLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDLRWF 334
           WLP L    YL+ S   + GFDPL  A  P  +++F
Sbjct: 24  WLPQLY--LYLEKSSPYECGFDPLGSARLPFSMKFF 57
to top
>NU3M_DIDMA (P41306) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 227 WLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDLRWF 334
           WLP L    YL+ S   + GFDPL  A  P  +++F
Sbjct: 24  WLPQLY--LYLEKSSPYECGFDPLGSARLPFSMKFF 57


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,910,334
Number of Sequences: 219361
Number of extensions: 459373
Number of successful extensions: 1696
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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