| Clone Name | baet40c09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119298.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E09, full insert sequence Length = 3025 Score = 406 bits (205), Expect = e-110 Identities = 375/432 (86%) Strand = Plus / Plus Query: 20 ttctactctggggagagggcaaaggccaaaattctgaagatatgtgatgcttttcgtgca 79 |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 924 ttctactctggggatagagcaaaagccaaaattctgaagatatgtgatgcgttcaacgca 983 Query: 80 aaccgttacccttttcctgaagaccttgctaaacaaacacatactgttcaggaggtagct 139 || || ||||| ||||| ||||| |||||| |||| |||| |||||||||||||| || Sbjct: 984 aatcgctacccatttccagaagatgttgctagacaattacatgctgttcaggaggtatct 1043 Query: 140 ggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtgacagtata 199 | |||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| Sbjct: 1044 gcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtgacaatata 1103 Query: 200 ctcaaaactattgcatcagagtttgagcattggaaccatctggcaaagaaggaaaaatca 259 | |||| ||| || || ||||||||| ||||||||| ||||||||| ||||||||| | Sbjct: 1104 ttgaaaaatatcgcgtctgagtttgagaattggaaccgtctggcaaataaggaaaaaata 1163 Query: 260 atttaccacactctgaacatgttgagcgttgatgtgacgaagaaatgcttagttggtgag 319 |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 1164 atttaccacactttgaacatgttgagtgttgatgtgacaaagaaatgcttagttggtgag 1223 Query: 320 ggctggagtccagttttcgcaactaatcaggttcaggatgcacttcagcgtgctactctt 379 ||||||||||||||||| ||||| | |||| | || ||||| || ||||| ||||||||| Sbjct: 1224 ggctggagtccagtttttgcaacaactcagatccaagatgcgctccagcgagctactctt 1283 Query: 380 gagagcaagtcccaagttggctcgatttttcaggttcttaacacanaagagtctcctcca 439 || ||||| ||||||||||| || |||||||| ||||| |||||| ||| ||||| || Sbjct: 1284 gatagcaaatcccaagttggttcaatttttcaagttctcaacacaacagaatctcccccg 1343 Query: 440 acatatttccag 451 |||||||||||| Sbjct: 1344 acatatttccag 1355
>dbj|AK101151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027C12, full insert sequence Length = 3018 Score = 406 bits (205), Expect = e-110 Identities = 375/432 (86%) Strand = Plus / Plus Query: 20 ttctactctggggagagggcaaaggccaaaattctgaagatatgtgatgcttttcgtgca 79 |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 917 ttctactctggggatagagcaaaagccaaaattctgaagatatgtgatgcgttcaacgca 976 Query: 80 aaccgttacccttttcctgaagaccttgctaaacaaacacatactgttcaggaggtagct 139 || || ||||| ||||| ||||| |||||| |||| |||| |||||||||||||| || Sbjct: 977 aatcgctacccatttccagaagatgttgctagacaattacatgctgttcaggaggtatct 1036 Query: 140 ggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtgacagtata 199 | |||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| Sbjct: 1037 gcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtgacaatata 1096 Query: 200 ctcaaaactattgcatcagagtttgagcattggaaccatctggcaaagaaggaaaaatca 259 | |||| ||| || || ||||||||| ||||||||| ||||||||| ||||||||| | Sbjct: 1097 ttgaaaaatatcgcgtctgagtttgagaattggaaccgtctggcaaataaggaaaaaata 1156 Query: 260 atttaccacactctgaacatgttgagcgttgatgtgacgaagaaatgcttagttggtgag 319 |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 1157 atttaccacactttgaacatgttgagtgttgatgtgacaaagaaatgcttagttggtgag 1216 Query: 320 ggctggagtccagttttcgcaactaatcaggttcaggatgcacttcagcgtgctactctt 379 ||||||||||||||||| ||||| | |||| | || ||||| || ||||| ||||||||| Sbjct: 1217 ggctggagtccagtttttgcaacaactcagatccaagatgcgctccagcgagctactctt 1276 Query: 380 gagagcaagtcccaagttggctcgatttttcaggttcttaacacanaagagtctcctcca 439 || ||||| ||||||||||| || |||||||| ||||| |||||| ||| ||||| || Sbjct: 1277 gatagcaaatcccaagttggttcaatttttcaagttctcaacacaacagaatctcccccg 1336 Query: 440 acatatttccag 451 |||||||||||| Sbjct: 1337 acatatttccag 1348
>ref|NM_195204.1| Oryza sativa (japonica cultivar-group) putative proton pump (OSJNBa0029P16.14), mRNA Length = 2352 Score = 311 bits (157), Expect = 1e-81 Identities = 375/448 (83%) Strand = Plus / Plus Query: 4 aaatacatttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatg 63 |||| ||||||| ||||||||||||||||||| ||||| |||| ||| |||| ||||| Sbjct: 603 aaatgcatttgttatattctactctggggagagagcaaaatccaagattgtgaaaatatg 662 Query: 64 tgatgcttttcgtgcaaaccgttacccttttcctgaagaccttgctaaacaaacacatac 123 |||||||||| |||| ||||||||||| ||||| ||||| || | ||||| || || Sbjct: 663 tgatgcttttggtgccaaccgttacccatttccagaagatctaggcaaacagctgcagac 722 Query: 124 tgttcaggaggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagc 183 | ||||||||||| ||||||| ||||||||||| |||||||| ||||| || || ||||| Sbjct: 723 tattcaggaggtatctggaaaaatatcagagttgaaggcaactattgaaataggtttagc 782 Query: 184 tcatcgtgacagtatactcaaaactattgcatcagagtttgagcattggaaccatctggc 243 ||| |||||||| ||||| |||| |||| | || ||||||||||| |||||| |||| Sbjct: 783 tcaccgtgacagcatacttaaaaatatttcttccgagtttgagcaatggaacaccctggt 842 Query: 244 aaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaa 303 |||||| |||||| | ||||||||||| | ||||||||||| |||||||||| ||||| Sbjct: 843 aaagaaagaaaaagctatttaccacacattaaacatgttgagtcttgatgtgacaaagaa 902 Query: 304 atgcttagttggtgagggctggagtccagttttcgcaactaatcaggttcaggatgcact 363 |||||| |||| |||||| |||||||| || || ||||| | |||| | || |||||||| Sbjct: 903 atgcttggttgctgagggatggagtccggtgtttgcaacaagtcagatccaagatgcact 962 Query: 364 tcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggttcttaacac 423 ||||||||||||| |||| ||||| ||||||||||| || ||||| || ||||| ||||| Sbjct: 963 tcagcgtgctactgttgatagcaaatcccaagttggttcaattttccaagttctcaacac 1022 Query: 424 anaagagtctcctccaacatatttccag 451 | |||| ||||||||||||| ||||||| Sbjct: 1023 acaagaatctcctccaacatttttccag 1050
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 149 bits (75), Expect = 9e-33 Identities = 102/111 (91%) Strand = Plus / Plus Query: 241 ggcaaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaa 300 |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||| || Sbjct: 7957030 ggcaaataaggaaaaaataatttaccacactttgaacatgttgagtgttgatgtgacaaa 7957089 Query: 301 gaaatgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 351 |||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 7957090 gaaatgcttagttggtgagggctggagtccagtttttgcaacaactcaggt 7957140 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 132 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 191 ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 7956806 aggtatctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtg 7956865 Query: 192 acagtatactcaaaactattgcatcagagtttgagcattggaaccatctgg 242 ||| |||| | |||| ||| || || ||||||||| ||||||||| ||||| Sbjct: 7956866 acaatatattgaaaaatatcgcgtctgagtttgagaattggaaccgtctgg 7956916 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 20 ttctactctggggagagggcaaaggccaaaattctgaagatatgtgatgcttttcgtgca 79 |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 7956243 ttctactctggggatagagcaaaagccaaaattctgaagatatgtgatgcgttcaacgca 7956302 Query: 80 aaccgttacccttttcctgaagaccttgctaaacaaacacatactgttcaggaggt 135 || || ||||| ||||| ||||| |||||| |||| |||| ||||||||||||| Sbjct: 7956303 aatcgctacccatttccagaagatgttgctagacaattacatgctgttcaggaggt 7956358 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 356 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 415 ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||| ||| Sbjct: 7957257 gatgcgctccagcgagctactcttgatagcaaatcccaagttggttcaatttttcaagtt 7957316 Query: 416 cttaacacanaagagtctcctccaacatatttccag 451 || |||||| ||| ||||| || |||||||||||| Sbjct: 7957317 ctcaacacaacagaatctcccccgacatatttccag 7957352
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 149 bits (75), Expect = 9e-33 Identities = 102/111 (91%) Strand = Plus / Plus Query: 241 ggcaaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaa 300 |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||| || Sbjct: 7954865 ggcaaataaggaaaaaataatttaccacactttgaacatgttgagtgttgatgtgacaaa 7954924 Query: 301 gaaatgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 351 |||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 7954925 gaaatgcttagttggtgagggctggagtccagtttttgcaacaactcaggt 7954975 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 132 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 191 ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 7954641 aggtatctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtg 7954700 Query: 192 acagtatactcaaaactattgcatcagagtttgagcattggaaccatctgg 242 ||| |||| | |||| ||| || || ||||||||| ||||||||| ||||| Sbjct: 7954701 acaatatattgaaaaatatcgcgtctgagtttgagaattggaaccgtctgg 7954751 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 20 ttctactctggggagagggcaaaggccaaaattctgaagatatgtgatgcttttcgtgca 79 |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 7954078 ttctactctggggatagagcaaaagccaaaattctgaagatatgtgatgcgttcaacgca 7954137 Query: 80 aaccgttacccttttcctgaagaccttgctaaacaaacacatactgttcaggaggt 135 || || ||||| ||||| ||||| |||||| |||| |||| ||||||||||||| Sbjct: 7954138 aatcgctacccatttccagaagatgttgctagacaattacatgctgttcaggaggt 7954193 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 356 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 415 ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||| ||| Sbjct: 7955092 gatgcgctccagcgagctactcttgatagcaaatcccaagttggttcaatttttcaagtt 7955151 Query: 416 cttaacacanaagagtctcctccaacatatttccag 451 || |||||| ||| ||||| || |||||||||||| Sbjct: 7955152 ctcaacacaacagaatctcccccgacatatttccag 7955187
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 149 bits (75), Expect = 9e-33 Identities = 102/111 (91%) Strand = Plus / Plus Query: 241 ggcaaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaa 300 |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||| || Sbjct: 24393 ggcaaataaggaaaaaataatttaccacactttgaacatgttgagtgttgatgtgacaaa 24452 Query: 301 gaaatgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 351 |||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 24453 gaaatgcttagttggtgagggctggagtccagtttttgcaacaactcaggt 24503 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 132 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 191 ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 24169 aggtatctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtg 24228 Query: 192 acagtatactcaaaactattgcatcagagtttgagcattggaaccatctgg 242 ||| |||| | |||| ||| || || ||||||||| ||||||||| ||||| Sbjct: 24229 acaatatattgaaaaatatcgcgtctgagtttgagaattggaaccgtctgg 24279 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 20 ttctactctggggagagggcaaaggccaaaattctgaagatatgtgatgcttttcgtgca 79 |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 23606 ttctactctggggatagagcaaaagccaaaattctgaagatatgtgatgcgttcaacgca 23665 Query: 80 aaccgttacccttttcctgaagaccttgctaaacaaacacatactgttcaggaggt 135 || || ||||| ||||| ||||| |||||| |||| |||| ||||||||||||| Sbjct: 23666 aatcgctacccatttccagaagatgttgctagacaattacatgctgttcaggaggt 23721 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 356 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 415 ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||| ||| Sbjct: 24620 gatgcgctccagcgagctactcttgatagcaaatcccaagttggttcaatttttcaagtt 24679 Query: 416 cttaacacanaagagtctcctccaacatatttccag 451 || |||||| ||| ||||| || |||||||||||| Sbjct: 24680 ctcaacacaacagaatctcccccgacatatttccag 24715
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 149 bits (75), Expect = 9e-33 Identities = 102/111 (91%) Strand = Plus / Plus Query: 241 ggcaaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaa 300 |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||| || Sbjct: 142628 ggcaaataaggaaaaaataatttaccacactttgaacatgttgagtgttgatgtgacaaa 142687 Query: 301 gaaatgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 351 |||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 142688 gaaatgcttagttggtgagggctggagtccagtttttgcaacaactcaggt 142738 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 132 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 191 ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 142404 aggtatctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtg 142463 Query: 192 acagtatactcaaaactattgcatcagagtttgagcattggaaccatctgg 242 ||| |||| | |||| ||| || || ||||||||| ||||||||| ||||| Sbjct: 142464 acaatatattgaaaaatatcgcgtctgagtttgagaattggaaccgtctgg 142514 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 20 ttctactctggggagagggcaaaggccaaaattctgaagatatgtgatgcttttcgtgca 79 |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 141841 ttctactctggggatagagcaaaagccaaaattctgaagatatgtgatgcgttcaacgca 141900 Query: 80 aaccgttacccttttcctgaagaccttgctaaacaaacacatactgttcaggaggt 135 || || ||||| ||||| ||||| |||||| |||| |||| ||||||||||||| Sbjct: 141901 aatcgctacccatttccagaagatgttgctagacaattacatgctgttcaggaggt 141956 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 356 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 415 ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||| ||| Sbjct: 142855 gatgcgctccagcgagctactcttgatagcaaatcccaagttggttcaatttttcaagtt 142914 Query: 416 cttaacacanaagagtctcctccaacatatttccag 451 || |||||| ||| ||||| || |||||||||||| Sbjct: 142915 ctcaacacaacagaatctcccccgacatatttccag 142950
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 105 bits (53), Expect = 1e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 356 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 415 ||||||||||||||||||||| |||| ||||| ||||||||||| || ||||| || ||| Sbjct: 107302 gatgcacttcagcgtgctactgttgatagcaaatcccaagttggttcaattttccaagtt 107243 Query: 416 cttaacacanaagagtctcctccaacatatttccag 451 || |||||| |||| ||||||||||||| ||||||| Sbjct: 107242 ctcaacacacaagaatctcctccaacatttttccag 107207 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 4 aaatacatttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatg 63 |||| ||||||| ||||||||||||||||||| ||||| |||| ||| |||| ||||| Sbjct: 108274 aaatgcatttgttatattctactctggggagagagcaaaatccaagattgtgaaaatatg 108215 Query: 64 tgatgcttttcgtgcaaaccgttacccttttcctgaaga 102 |||||||||| |||| ||||||||||| ||||| ||||| Sbjct: 108214 tgatgcttttggtgccaaccgttacccatttccagaaga 108176 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 132 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 191 ||||| ||||||| ||||||||||| |||||||| ||||| || || |||||||| |||| Sbjct: 107771 aggtatctggaaaaatatcagagttgaaggcaactattgaaataggtttagctcaccgtg 107712 Query: 192 acagtatactcaaaactattgcatcagagtttgagcattggaac 235 |||| ||||| |||| |||| | || ||||||||||| |||||| Sbjct: 107711 acagcatacttaaaaatatttcttccgagtttgagcaatggaac 107668 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 244 aaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaa 303 |||||| |||||| | ||||||||||| | ||||||||||| |||||||||| ||||| Sbjct: 107515 aaagaaagaaaaagctatttaccacacattaaacatgttgagtcttgatgtgacaaagaa 107456 Query: 304 atgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 351 |||||| |||| |||||| |||||||| || || ||||| | |||||| Sbjct: 107455 atgcttggttgctgagggatggagtccggtgtttgcaacaagtcaggt 107408
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 105 bits (53), Expect = 1e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 356 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 415 ||||||||||||||||||||| |||| ||||| ||||||||||| || ||||| || ||| Sbjct: 5436346 gatgcacttcagcgtgctactgttgatagcaaatcccaagttggttcaattttccaagtt 5436405 Query: 416 cttaacacanaagagtctcctccaacatatttccag 451 || |||||| |||| ||||||||||||| ||||||| Sbjct: 5436406 ctcaacacacaagaatctcctccaacatttttccag 5436441 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 4 aaatacatttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatg 63 |||| ||||||| ||||||||||||||||||| ||||| |||| ||| |||| ||||| Sbjct: 5435374 aaatgcatttgttatattctactctggggagagagcaaaatccaagattgtgaaaatatg 5435433 Query: 64 tgatgcttttcgtgcaaaccgttacccttttcctgaaga 102 |||||||||| |||| ||||||||||| ||||| ||||| Sbjct: 5435434 tgatgcttttggtgccaaccgttacccatttccagaaga 5435472 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 132 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 191 ||||| ||||||| ||||||||||| |||||||| ||||| || || |||||||| |||| Sbjct: 5435877 aggtatctggaaaaatatcagagttgaaggcaactattgaaataggtttagctcaccgtg 5435936 Query: 192 acagtatactcaaaactattgcatcagagtttgagcattggaac 235 |||| ||||| |||| |||| | || ||||||||||| |||||| Sbjct: 5435937 acagcatacttaaaaatatttcttccgagtttgagcaatggaac 5435980 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 244 aaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaa 303 |||||| |||||| | ||||||||||| | ||||||||||| |||||||||| ||||| Sbjct: 5436133 aaagaaagaaaaagctatttaccacacattaaacatgttgagtcttgatgtgacaaagaa 5436192 Query: 304 atgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 351 |||||| |||| |||||| |||||||| || || ||||| | |||||| Sbjct: 5436193 atgcttggttgctgagggatggagtccggtgtttgcaacaagtcaggt 5436240
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 105 bits (53), Expect = 1e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 356 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 415 ||||||||||||||||||||| |||| ||||| ||||||||||| || ||||| || ||| Sbjct: 5437133 gatgcacttcagcgtgctactgttgatagcaaatcccaagttggttcaattttccaagtt 5437192 Query: 416 cttaacacanaagagtctcctccaacatatttccag 451 || |||||| |||| ||||||||||||| ||||||| Sbjct: 5437193 ctcaacacacaagaatctcctccaacatttttccag 5437228 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 4 aaatacatttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatg 63 |||| ||||||| ||||||||||||||||||| ||||| |||| ||| |||| ||||| Sbjct: 5436161 aaatgcatttgttatattctactctggggagagagcaaaatccaagattgtgaaaatatg 5436220 Query: 64 tgatgcttttcgtgcaaaccgttacccttttcctgaaga 102 |||||||||| |||| ||||||||||| ||||| ||||| Sbjct: 5436221 tgatgcttttggtgccaaccgttacccatttccagaaga 5436259 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 132 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 191 ||||| ||||||| ||||||||||| |||||||| ||||| || || |||||||| |||| Sbjct: 5436664 aggtatctggaaaaatatcagagttgaaggcaactattgaaataggtttagctcaccgtg 5436723 Query: 192 acagtatactcaaaactattgcatcagagtttgagcattggaac 235 |||| ||||| |||| |||| | || ||||||||||| |||||| Sbjct: 5436724 acagcatacttaaaaatatttcttccgagtttgagcaatggaac 5436767 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 244 aaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaa 303 |||||| |||||| | ||||||||||| | ||||||||||| |||||||||| ||||| Sbjct: 5436920 aaagaaagaaaaagctatttaccacacattaaacatgttgagtcttgatgtgacaaagaa 5436979 Query: 304 atgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 351 |||||| |||| |||||| |||||||| || || ||||| | |||||| Sbjct: 5436980 atgcttggttgctgagggatggagtccggtgtttgcaacaagtcaggt 5437027
>emb|AJ438978.1|MCR438978 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase subunit 100 kDa subunit (vpha-a gene) Length = 2783 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 219 agtttgagcattggaaccatctggcaaagaaggaaaaatcaatttaccacactctgaaca 278 |||||||||| ||||||| ||||| |||||| ||||||||||| ||||||||||||| Sbjct: 996 agtttgagcagtggaaccttctggtgcggaaggagaaatcaatttatcacactctgaaca 1055 Query: 279 tg 280 || Sbjct: 1056 tg 1057 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 18 tattctactctggggagagggcaaaggccaaaattctgaagatatgtga 66 ||||||| ||||| || ||||||||| ||||||||||||||| ||||| Sbjct: 795 tattctattctggagatagggcaaagaacaaaattctgaagatttgtga 843
>ref|NM_127713.3| Arabidopsis thaliana ATPase AT2G21410 mRNA, complete cds Length = 2860 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 10 atttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatgtgatgc 69 ||||||||| ||||| |||||||| || ||||| ||||||||| ||||||||||| || Sbjct: 812 atttgtcgtcttctattctggggaaagagcaaaaagcaaaattcttaagatatgtgaagc 871 Query: 70 tttt 73 |||| Sbjct: 872 tttt 875
>gb|AY124855.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2466 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 10 atttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatgtgatgc 69 ||||||||| ||||| |||||||| || ||||| ||||||||| ||||||||||| || Sbjct: 729 atttgtcgtcttctattctggggaaagagcaaaaagcaaaattcttaagatatgtgaagc 788 Query: 70 tttt 73 |||| Sbjct: 789 tttt 792
>gb|AY099690.1| Arabidopsis thaliana putative vacuolar proton-ATPase subunit (At2g21410) mRNA, complete cds Length = 2667 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 10 atttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatgtgatgc 69 ||||||||| ||||| |||||||| || ||||| ||||||||| ||||||||||| || Sbjct: 808 atttgtcgtcttctattctggggaaagagcaaaaagcaaaattcttaagatatgtgaagc 867 Query: 70 tttt 73 |||| Sbjct: 868 tttt 871
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 10 atttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatgtgatgc 69 ||||||||| ||||| |||||||| || ||||| ||||||||| ||||||||||| || Sbjct: 61455 atttgtcgtcttctattctggggaaagagcaaaaagcaaaattcttaagatatgtgaagc 61514 Query: 70 tttt 73 |||| Sbjct: 61515 tttt 61518
>gb|AF424556.1|AF424556 Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2631 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 10 atttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatgtgatgc 69 ||||||||| ||||| |||||||| || ||||| ||||||||| ||||||||||| || Sbjct: 765 atttgtcgtcttctattctggggaaagagcaaaaagcaaaattcttaagatatgtgaagc 824 Query: 70 tttt 73 |||| Sbjct: 825 tttt 828
>gb|AY053417.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2852 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 10 atttgtcgtattctactctggggagagggcaaaggccaaaattctgaagatatgtgatgc 69 ||||||||| ||||| |||||||| || ||||| ||||||||| ||||||||||| || Sbjct: 804 atttgtcgtcttctattctggggaaagagcaaaaagcaaaattcttaagatatgtgaagc 863 Query: 70 tttt 73 |||| Sbjct: 864 tttt 867
>gb|BT013720.1| Lycopersicon esculentum clone 132568R, mRNA sequence Length = 3001 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 254 aaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaaatgcttagtt 313 ||||||||||| |||||||| |||||| | ||| |||||||||| || ||||| | || Sbjct: 1019 aaatcaatttatcacactctcaacatgcttagcattgatgtgaccaaaaaatgtctggtg 1078 Query: 314 ggtgagggctggagtccagttttcgcaactaatcaggttcaggatg 359 | ||| || |||||||| ||||| ||||| || ||| | ||||||| Sbjct: 1079 gctgaaggttggagtcctgtttttgcaaccaaacagatccaggatg 1124
>dbj|AP006110.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39G11, TM0195b, complete sequence Length = 52245 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Plus Query: 47 aaaattctgaagatatgtgatgcttttcgtgcaaaccgttacccttt 93 ||||||| |||||||||||||||||| | ||||| ||||| ||||| Sbjct: 18342 aaaattcaaaagatatgtgatgcttttggagcaaatcgttatccttt 18388 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 245 aagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaaa 304 |||||||||||||| |||||| ||||||| || ||| | ||| || |||| |||| |||| Sbjct: 19210 aagaaggaaaaatccatttactacactctaaatatgctaagcattaatgtcacgaggaaa 19269 Query: 305 tg 306 || Sbjct: 19270 tg 19271
>gb|AC152400.9| Mus musculus chromosome 3, clone RP23-277L18, complete sequence Length = 190913 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 113 caaacacatactgttcaggagg 134 |||||||||||||||||||||| Sbjct: 86156 caaacacatactgttcaggagg 86177
>emb|AL391724.7| Human DNA sequence from clone RP11-350A18 on chromosome 13 Contains a novel gene, complete sequence Length = 141628 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ctaaacaaacacatactgttca 129 |||||||||||||||||||||| Sbjct: 44972 ctaaacaaacacatactgttca 44993
>emb|AJ580823.1|LCO580823 Lotus corniculatus var. japonicus ORF1, ORF2, ORF3 and genes for vacuolar proton-ATPase subunit-like protein, papain-like cysteine proteinase-like protein 1 and papain-like cysteine proteinase-like protein 2 Length = 46563 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 50 attctgaagatatgtgatgcttttcgtgcaaaccgttacccttttcctga 99 |||||||| || |||||||||||| |||| || || ||||||||| |||| Sbjct: 16356 attctgaaaatctgtgatgcttttagtgctaatcgctacccttttgctga 16405
>dbj|AK036206.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630045K08 product:unclassifiable, full insert sequence Length = 3365 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 113 caaacacatactgttcaggagg 134 |||||||||||||||||||||| Sbjct: 352 caaacacatactgttcaggagg 331
>dbj|AP005666.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258b, complete sequence Length = 46491 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 50 attctgaagatatgtgatgcttttcgtgcaaaccgttacccttttcctga 99 |||||||| || |||||||||||| |||| || || ||||||||| |||| Sbjct: 16422 attctgaaaatctgtgatgcttttagtgctaatcgctacccttttgctga 16471
>dbj|AB092808.1| Lotus japonicus gene for hypothetical proteins, complete and partial cds, clone:BAC259.12D-1 Length = 32644 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 50 attctgaagatatgtgatgcttttcgtgcaaaccgttacccttttcctga 99 |||||||| || |||||||||||| |||| || || ||||||||| |||| Sbjct: 3532 attctgaaaatctgtgatgcttttagtgctaatcgctacccttttgctga 3581
>emb|X95096.1|RNMACSTIM R.norvegicus mRNA for macrophage stimulating protein Length = 2222 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cacatactgttcaggaggtag 137 ||||||||||||||||||||| Sbjct: 1812 cacatactgttcaggaggtag 1792
>gb|BC089796.1| Rattus norvegicus Macrophage stimulating 1 (hepatocyte growth factor-like), mRNA (cDNA clone MGC:108677 IMAGE:7322260), complete cds Length = 2280 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cacatactgttcaggaggtag 137 ||||||||||||||||||||| Sbjct: 1816 cacatactgttcaggaggtag 1796
>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22, complete sequence Length = 209223 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cttgctaaacaaacacatact 124 ||||||||||||||||||||| Sbjct: 85488 cttgctaaacaaacacatact 85468
>ref|NM_024352.1| Rattus norvegicus Macrophage stimulating 1 (hepatocyte growth factor-like) (Mst1), mRNA Length = 2222 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cacatactgttcaggaggtag 137 ||||||||||||||||||||| Sbjct: 1812 cacatactgttcaggaggtag 1792
>ref|NM_120068.3| Arabidopsis thaliana ATPase AT4G39080 mRNA, complete cds Length = 4147 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 caaaattctgaagatatgtgatgctttt 73 |||||||||||| |||||||| |||||| Sbjct: 846 caaaattctgaaaatatgtgaagctttt 873
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 tctcctccaacatatttcca 450 |||||||||||||||||||| Sbjct: 86233 tctcctccaacatatttcca 86252
>ref|NM_001009982.1| Danio rerio solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 like (slc17a6l), mRNA Length = 2608 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tgaacatgttgagcgttgatgtga 296 ||||||||||||| |||||||||| Sbjct: 812 tgaacatgttgagggttgatgtga 789
>gb|AC123810.4| Mus musculus BAC clone RP24-178B17 from chromosome 8, complete sequence Length = 161521 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aaagatatcagagttaaagg 161 |||||||||||||||||||| Sbjct: 62254 aaagatatcagagttaaagg 62273
>gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosome 2, complete sequence Length = 221128 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aaacaaacacatactgttca 129 |||||||||||||||||||| Sbjct: 93757 aaacaaacacatactgttca 93738
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 40.1 bits (20), Expect = 6.1 Identities = 77/96 (80%) Strand = Plus / Plus Query: 247 gaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaaatg 306 |||||||||||| ||| |||| || || |||||| | ||| | ||||| ||||| ||||| Sbjct: 58235 gaaggaaaaatccattcaccatacccttaacatgctaagcctggatgtaacgaaaaaatg 58294 Query: 307 cttagttggtgagggctggagtccagttttcgcaac 342 | || | |||||| |||||||| ||||| ||||| Sbjct: 58295 tcttgtggctgaggggtggagtcctgtttttgcaac 58330
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 caaaattctgaagatatgtgatgctttt 73 |||||||||||| |||||||| |||||| Sbjct: 125668 caaaattctgaaaatatgtgaagctttt 125695
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 caaaattctgaagatatgtgatgctttt 73 |||||||||||| |||||||| |||||| Sbjct: 87658 caaaattctgaaaatatgtgaagctttt 87685
>gb|AC139882.29| Medicago truncatula clone mth2-32f21, complete sequence Length = 115770 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 agtaaatacatttgtcgtattcta 24 |||||||| ||||||||||||||| Sbjct: 110784 agtaaataaatttgtcgtattcta 110761
>gb|AY060557.1| Arabidopsis thaliana AT4g39080/F19H22_180 mRNA, complete cds Length = 2819 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 caaaattctgaagatatgtgatgctttt 73 |||||||||||| |||||||| |||||| Sbjct: 837 caaaattctgaaaatatgtgaagctttt 864
>emb|BX284619.11| Zebrafish DNA sequence from clone DKEY-251E24 in linkage group 1, complete sequence Length = 196931 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 taaacaaacacatactgttc 128 |||||||||||||||||||| Sbjct: 25916 taaacaaacacatactgttc 25897
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 aactattgcatcagagtttg 224 |||||||||||||||||||| Sbjct: 23752271 aactattgcatcagagtttg 23752252
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 tctcctccaacatatttcca 450 |||||||||||||||||||| Sbjct: 27373776 tctcctccaacatatttcca 27373795
>gb|DQ004562.1| Streptococcus mitis strain SK609 IgA1 protease (iga) gene, complete cds Length = 7553 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tgaagaccttgctaaacaaa 116 |||||||||||||||||||| Sbjct: 6068 tgaagaccttgctaaacaaa 6087
>gb|BT002615.1| Arabidopsis thaliana At4g39080/F19H22_180 mRNA, complete cds Length = 2466 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 caaaattctgaagatatgtgatgctttt 73 |||||||||||| |||||||| |||||| Sbjct: 762 caaaattctgaaaatatgtgaagctttt 789
>gb|AC098691.2| Homo sapiens chromosome 1 clone RP11-509K22, complete sequence Length = 166885 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 atctggcaaagaaggaaaaatcaa 260 ||||| |||||||||||||||||| Sbjct: 69472 atctgacaaagaaggaaaaatcaa 69495
>dbj|AB183387.1| Danio rerio VGLUT2.2 mRNA for vesicular glutamate transporter 2.2, complete cds Length = 2608 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tgaacatgttgagcgttgatgtga 296 ||||||||||||| |||||||||| Sbjct: 812 tgaacatgttgagggttgatgtga 789
>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06 Length = 156500 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 aactattgcatcagagtttg 224 |||||||||||||||||||| Sbjct: 100347 aactattgcatcagagtttg 100328
>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete sequence Length = 190808 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aaacaaacacatactgttca 129 |||||||||||||||||||| Sbjct: 150468 aaacaaacacatactgttca 150449
>gb|AF173553.1|AF173553 Manduca sexta V-ATPase 110 kDa integral membrane subunit mRNA, complete cds Length = 5541 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 taccacactctgaacatgtt 282 |||||||||||||||||||| Sbjct: 1021 taccacactctgaacatgtt 1040
>gb|AC147872.3| Monodelphis domestica clone VMRC6-555H19, complete sequence Length = 139145 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctaatcaggttcaggatgca 361 |||||||||||||||||||| Sbjct: 69058 ctaatcaggttcaggatgca 69077
>gb|AC007786.1|AC007786 Homo sapiens chromosome 19, BAC 41855 (CIT-B-32o4), complete sequence Length = 229061 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tagttggtgagggctggagtccag 332 |||||||||||||||||| ||||| Sbjct: 39903 tagttggtgagggctggactccag 39880
>emb|CT030177.6| M.truncatula DNA sequence from clone MTH2-154J16 on chromosome 3, complete sequence Length = 126881 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 agtaaatacatttgtcgtattcta 24 |||||||| ||||||||||||||| Sbjct: 42441 agtaaataaatttgtcgtattcta 42464
>emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in linkage group 1, complete sequence Length = 272535 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 taaacaaacacatactgttc 128 |||||||||||||||||||| Sbjct: 43717 taaacaaacacatactgttc 43698
>gb|AC149051.4| Mus musculus BAC clone RP24-325F10 from 8, complete sequence Length = 184939 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aaagatatcagagttaaagg 161 |||||||||||||||||||| Sbjct: 25628 aaagatatcagagttaaagg 25647
>gb|AC151476.1| Mus musculus BAC clone RP23-287H13 from 8, complete sequence Length = 155220 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aaagatatcagagttaaagg 161 |||||||||||||||||||| Sbjct: 98588 aaagatatcagagttaaagg 98607
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctaatcaggttcaggatgca 361 |||||||||||||||||||| Sbjct: 1705385 ctaatcaggttcaggatgca 1705404 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,419,225 Number of Sequences: 3902068 Number of extensions: 4419225 Number of successful extensions: 83297 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83033 Number of HSP's gapped (non-prelim): 258 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)