| Clone Name | baet40b05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 311 bits (157), Expect = 5e-82 Identities = 185/193 (95%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 30 tcccgcgtaccaagcccaccgaccaacatggcagcgtctctccaagccgcggccacgctg 89 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 2 tcccgcgtaccaagcc-accgaccaacatggcagcgtctctccaagccgcggccaccgtg 60 Query: 90 atgccggccaagatcggcggccgggcctcctccgtgcggccgtcgtcgcacgtcgcccgg 149 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 61 atgccggccaagatcggcggccgggcctcctccgcgcgaccgtcgtcgcacgtcgcccgg 120 Query: 150 gcgttcggcgtcgacgctgccgccaggatcacgtgctccctgcaatccgacatcagggag 209 ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||| Sbjct: 121 gcgttcggcgtcgacgctggcgccaggatcacctgctccctgcagtccgacatcagggag 180 Query: 210 gtcgcaagcaagt 222 ||||||||||||| Sbjct: 181 gtcgcaagcaagt 193
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 88 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 147 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 148 tgctccctgcagtccgacatccgggaggtcgc 179 Score = 79.8 bits (40), Expect = 3e-12 Identities = 63/70 (90%), Gaps = 3/70 (4%) Strand = Plus / Plus Query: 57 atggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggccgg 113 |||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||||| Sbjct: 1 atggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggccgg 60 Query: 114 gcctcctccg 123 |||||||||| Sbjct: 61 gcctcctccg 70
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 17345607 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 17345666 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 17345667 tgctccctgcagtccgacatccgggaggtcgc 17345698 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 17345518 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 17345577 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 17345578 gggcctcctccg 17345589 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 41597608 gccgtcgtcgcacgtcgccc 41597627
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 111868 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 111927 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 111928 tgctccctgcagtccgacatccgggaggtcgc 111959 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 111779 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 111838 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 111839 gggcctcctccg 111850
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 153 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 212 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 213 tgctccctgcagtccgacatccgggaggtcgc 244 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 64 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 123 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 124 gggcctcctccg 135
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 160 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 219 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 220 tgctccctgcagtccgacatccgggaggtcgc 251 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 71 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 130 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 131 gggcctcctccg 142
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 161 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 220 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 221 tgctccctgcagtccgacatccgggaggtcgc 252 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 72 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 131 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 132 gggcctcctccg 143
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 157 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 216 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 217 tgctccctgcagtccgacatccgggaggtcgc 248 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 68 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 127 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 128 gggcctcctccg 139
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 137 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 196 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 197 tgctccctgcagtccgacatccgggaggtcgc 228 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 48 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 107 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 108 gggcctcctccg 119
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 157 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 216 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 217 tgctccctgcagtccgacatccgggaggtcgc 248 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 68 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 127 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 128 gggcctcctccg 139
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 140 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 199 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 200 tgctccctgcagtccgacatccgggaggtcgc 231 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 51 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 110 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 111 gggcctcctccg 122
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 162 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 221 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 222 tgctccctgcagtccgacatccgggaggtcgc 253 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 73 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 132 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 133 gggcctcctccg 144
>dbj|AK062941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-B10, full insert sequence Length = 620 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 152 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 211 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 212 tgctccctgcagtccgacatccgggaggtcgc 243 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 63 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 122 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 123 gggcctcctccg 134
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 89.7 bits (45), Expect = 3e-15 Identities = 80/92 (86%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 157 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 216 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 217 tgctccctgcagtccgacatccgggaggtcgc 248 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 68 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 127 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 128 gggcctcctccg 139
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 83.8 bits (42), Expect = 2e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 55 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 111 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 48 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 107 Query: 112 gggcctcctccg 123 |||||||||||| Sbjct: 108 gggcctcctccg 119 Score = 81.8 bits (41), Expect = 8e-13 Identities = 79/92 (85%), Gaps = 6/92 (6%) Strand = Plus / Plus Query: 129 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 182 ||||| |||||||||||| |||| |||||||||||| || |||| |||||||||| Sbjct: 137 ccgtcttcgcacgtcgccagggcattcggcgtcgacaccggtgccgccggcaggatcacg 196 Query: 183 tgctccctgcaatccgacatcagggaggtcgc 214 ||||||||||| ||||||||| |||||||||| Sbjct: 197 tgctccctgcagtccgacatccgggaggtcgc 228
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 63.9 bits (32), Expect = 2e-07 Identities = 55/62 (88%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 57 atggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggccgg 113 |||||||| || ||||||||||||| ||| ||||||| |||||||||||||||||||| Sbjct: 335 atggcagcctcgctccaagccgcgggcaccctgatgcagccggccaagatcggcggccgg 394 Query: 114 gc 115 || Sbjct: 395 gc 396 Score = 54.0 bits (27), Expect = 2e-04 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 148 gggcgttcggcgtcgacgctg---ccgccaggatcacgtgctccctgca 193 |||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 444 gggcgttcggggtcgacgccggcgccgccaggatcacgtgctccctgca 492
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 42.1 bits (21), Expect = 0.72 Identities = 27/29 (93%) Strand = Plus / Plus Query: 54 aacatggcagcgtctctccaagccgcggc 82 ||||||| |||||||||||||||||||| Sbjct: 69559 aacatggacgcgtctctccaagccgcggc 69587
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 42.1 bits (21), Expect = 0.72 Identities = 27/29 (93%) Strand = Plus / Plus Query: 54 aacatggcagcgtctctccaagccgcggc 82 ||||||| |||||||||||||||||||| Sbjct: 69753 aacatggacgcgtctctccaagccgcggc 69781
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.72 Identities = 27/29 (93%) Strand = Plus / Plus Query: 54 aacatggcagcgtctctccaagccgcggc 82 ||||||| |||||||||||||||||||| Sbjct: 33638499 aacatggacgcgtctctccaagccgcggc 33638527
>dbj|AK111108.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A04, full insert sequence Length = 826 Score = 42.1 bits (21), Expect = 0.72 Identities = 27/29 (93%) Strand = Plus / Minus Query: 54 aacatggcagcgtctctccaagccgcggc 82 ||||||| |||||||||||||||||||| Sbjct: 496 aacatggacgcgtctctccaagccgcggc 468
>ref|XM_519676.1| PREDICTED: Pan troglodytes similar to epoxide hydrolase 2, cytoplasmic (LOC464074), mRNA Length = 2517 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>ref|XM_463700.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 297 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 30 gccgtcgtcgcacgtcgccc 11
>gb|BC007708.2| Homo sapiens epoxide hydrolase 2, cytoplasmic, mRNA (cDNA clone MGC:11288 IMAGE:3946158), complete cds Length = 2118 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 122 gggcctcctccgtgcggccg 103
>ref|NM_001979.4| Homo sapiens epoxide hydrolase 2, cytoplasmic (EPHX2), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 169 gggcctcctccgtgcggccg 150
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcggcgtcgacgctgccgcc 173 |||||||||||||||||||| Sbjct: 866365 tcggcgtcgacgctgccgcc 866346
>gb|AF311103.5| Homo sapiens chromosome 8 clone SCb-212E3 map p21-p11, complete sequence Length = 234429 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 101179 gggcctcctccgtgcggccg 101160
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gcccgggcgttcggcgtcga 163 |||||||||||||||||||| Sbjct: 43043 gcccgggcgttcggcgtcga 43062
>gb|BT007592.1| Synthetic construct Homo sapiens epoxide hydrolase 2, cytoplasmic mRNA, partial cds Length = 1668 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|BT006885.1| Homo sapiens epoxide hydrolase 2, cytoplasmic mRNA, complete cds Length = 1668 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>dbj|AK096089.1| Homo sapiens cDNA FLJ38770 fis, clone KIDNE2016000, highly similar to SOLUBLE EPOXIDE HYDROLASE (EC 3.3.2.3) Length = 2041 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 146 gggcctcctccgtgcggccg 127
>dbj|AK096770.1| Homo sapiens cDNA FLJ39451 fis, clone PROST2009273, highly similar to SOLUBLE EPOXIDE HYDROLASE (SEH) (EC 3.3.2.3) Length = 2067 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 131 gggcctcctccgtgcggccg 112
>emb|CR590835.1| full-length cDNA clone CS0DM012YJ10 of Fetal liver of Homo sapiens (human) Length = 2067 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 117 gggcctcctccgtgcggccg 98
>emb|CR590101.1| full-length cDNA clone CS0DI033YF09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1959 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 105 gggcctcctccgtgcggccg 86
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 2358486 gccgtcgtcgcacgtcgccc 2358467
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 5951096 gccgtcgtcgcacgtcgccc 5951077
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 29388984 gccgtcgtcgcacgtcgccc 29388965
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466H10 Length = 176530 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 13210 gccgtcgtcgcacgtcgccc 13229
>gb|AF233336.1|AF233336 Homo sapiens clone 129-13 soluble epoxide hydrolase (EPHX2) mRNA, complete cds Length = 1786 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 122 gggcctcctccgtgcggccg 103
>gb|AF233335.1|AF233335 Homo sapiens clone 118-2 soluble epoxide hydrolase (EPHX2) mRNA, complete cds Length = 1783 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 122 gggcctcctccgtgcggccg 103
>gb|AF233334.1|AF233334 Homo sapiens clone 129-8 soluble epoxide hydrolase (EPHX2) mRNA, complete cds Length = 1783 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 122 gggcctcctccgtgcggccg 103
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 99865 gccgtcgtcgcacgtcgccc 99846
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 6266 gccgtcgtcgcacgtcgccc 6247
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 93544 gccgtcgtcgcacgtcgccc 93525
>gb|AY892830.1| Synthetic construct Homo sapiens clone FLH024624.01L epoxide hydrolase 2 cytoplasmic (EPHX2) mRNA, partial cds Length = 1668 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|AY892829.1| Synthetic construct Homo sapiens clone FLH024623.01L epoxide hydrolase 2 cytoplasmic (EPHX2) mRNA, partial cds Length = 1668 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|AY890363.1| Synthetic construct Homo sapiens clone FLH024628.01X epoxide hydrolase 2 cytoplasmic (EPHX2) mRNA, complete cds Length = 1668 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|AY890362.1| Synthetic construct Homo sapiens clone FLH024627.01X epoxide hydrolase 2 cytoplasmic (EPHX2) mRNA, complete cds Length = 1668 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|BC011628.2| Homo sapiens epoxide hydrolase 2, cytoplasmic, mRNA (cDNA clone MGC:10543 IMAGE:4053931), complete cds Length = 2156 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 153 gggcctcctccgtgcggccg 134
>emb|X97024.1|HSEPHX21 H.sapiens EPHX2 gene, exon 1 (and joined CDS) Length = 396 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 98 gggcctcctccgtgcggccg 79
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 2358430 gccgtcgtcgcacgtcgccc 2358411
>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgtcgtcgcacgtcgccc 147 |||||||||||||||||||| Sbjct: 83677 gccgtcgtcgcacgtcgccc 83658
>gb|BC013874.2| Homo sapiens epoxide hydrolase 2, cytoplasmic, mRNA (cDNA clone MGC:10466 IMAGE:3938557), complete cds Length = 2129 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 116 gggcctcctccgtgcggccg 97
>gb|L05779.1|HUMCYTEPOX Human cytosolic epoxide hydrolase mRNA, complete cds Length = 2100 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcctcctccgtgcggccg 131 |||||||||||||||||||| Sbjct: 129 gggcctcctccgtgcggccg 110 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,165,145 Number of Sequences: 3902068 Number of extensions: 1165145 Number of successful extensions: 75189 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74702 Number of HSP's gapped (non-prelim): 471 length of query: 222 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 200 effective length of database: 17,147,199,772 effective search space: 3429439954400 effective search space used: 3429439954400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)