Clone Information

BLAST Search Result

Clone Name	baet40a06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	198	5e-51
2	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	183	1e-46
3	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	181	9e-46
4	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	179	3e-45
5	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	177	1e-44
6	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	177	1e-44
7	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	176	2e-44
8	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	176	2e-44
9	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	175	5e-44
10	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	174	6e-44
11	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	174	6e-44
12	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	174	8e-44
13	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	173	2e-43
14	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	173	2e-43
15	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	171	5e-43
16	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	170	2e-42
17	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	170	2e-42
18	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	168	4e-42
19	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	167	8e-42
20	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	166	2e-41
21	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	165	4e-41
22	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	164	6e-41
23	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	164	8e-41
24	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	162	3e-40
25	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	161	5e-40
26	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	161	5e-40
27	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	161	5e-40
28	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	161	7e-40
29	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	160	9e-40
30	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	159	2e-39
31	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	159	2e-39
32	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	158	5e-39
33	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	158	5e-39
34	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	157	8e-39
35	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	157	1e-38
36	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	145	5e-35
37	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	145	5e-35
38	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	141	8e-34
39	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	140	2e-33
40	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	139	2e-33
41	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	139	3e-33
42	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	139	4e-33
43	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	138	5e-33
44	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	138	5e-33
45	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	138	6e-33
46	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	134	7e-32
47	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	134	9e-32
48	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	133	2e-31
49	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	129	2e-30
50	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	125	3e-29
51	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	125	6e-29
52	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	120	1e-27
53	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	118	5e-27
54	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	117	2e-26
55	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	115	6e-26
56	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	107	1e-23
57	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	86	4e-17
58	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	78	8e-15
59	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	72	4e-13
60	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	68	8e-12
61	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	66	3e-11
62	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	63	3e-10
63	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	59	5e-09
64	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	54	2e-07
65	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	54	2e-07
66	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	53	3e-07
67	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	52	8e-07
68	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	47	2e-05
69	CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl...	44	2e-04
70	CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...	43	4e-04
71	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	37	0.016
72	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	37	0.020
73	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	35	0.059
74	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	35	0.10
75	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	33	0.22
76	CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...	32	0.65
77	SHC1_HUMAN (P29353) SHC transforming protein 1 (SH2 domain prote...	31	1.1
78	DOCK5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)	30	2.5
79	CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...	30	2.5
80	SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inosit...	29	4.2
81	GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	5.5
82	NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Si...	29	5.5
83	MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (E...	28	7.2
84	MUC1_YEAST (P08640) Mucin-like protein 1 precursor	28	7.2
85	SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)	28	7.2
86	GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	7.2
87	TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (S...	28	9.4
88	S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (G...	28	9.4
89	FPGT_HUMAN (O14772) Fucose-1-phosphate guanylyltransferase (EC 2...	28	9.4
90	KAS2_STRGA (P16539) Tetracenomycin C polyketide putative beta-ke...	28	9.4
91	HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) ...	28	9.4
92	HISZ_SYNP7 (Q55267) ATP phosphoribosyltransferase regulatory sub...	28	9.4

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  198 bits (503), Expect = 5e-51
 Identities = 93/104 (89%), Positives = 96/104 (92%)
 Frame = +3

Query: 120 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEF 299
           GKAVK+LPSSAL G+ARV MRKTAAKAK V    PWYGSD VLYLGPLSG+PPSYLTGEF
Sbjct: 15  GKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEF 74

Query: 300 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  183 bits (465), Expect = 1e-46
 Identities = 91/105 (86%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAV ++PSS+ FGEARVTMRKTAAKAKP      PWYG D VLYLGPLSG+PPSYLTGE
Sbjct: 15  GKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGE 72

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  181 bits (458), Expect = 9e-46
 Identities = 91/105 (86%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAV ++PSS LFGEARVTMRKTAAKAKP      PWYG D VLYLGPLSG+PPSYLTGE
Sbjct: 15  GKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGE 72

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  179 bits (454), Expect = 3e-45
 Identities = 85/97 (87%), Positives = 88/97 (90%), Gaps = 1/97 (1%)
 Frame = +3

Query: 144 SSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWD 320
           SSALFGEAR+TMRKTAAK KP      PWYG+D VLYLGPLSG+PPSYLTGEFPGDYGWD
Sbjct: 21  SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80

Query: 321 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 81  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  177 bits (449), Expect = 1e-44
 Identities = 85/105 (80%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  PSS+ + G  +VTMRKTA+KAKPV    PWYG D V YLGP SG+ PSYLTGE
Sbjct: 14  GKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 74  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  177 bits (448), Expect = 1e-44
 Identities = 85/105 (80%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  PSS+ + G  RVTMRKTA KAKP     PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  176 bits (446), Expect = 2e-44
 Identities = 85/105 (80%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  PSS+ + G  +VTMRKTA KAKPV    PWYG D V YLGP SG+ PSYLTGE
Sbjct: 14  GKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 74  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118



 Score = 28.5 bits (62), Expect = 7.2
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG   +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 190 YPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 227

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  176 bits (446), Expect = 2e-44
 Identities = 84/105 (80%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  PSS+ + G  +VTMRKTA+KAKPV    PWYG + V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGE 74

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119



 Score = 28.5 bits (62), Expect = 7.2
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG   +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 191 YPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  175 bits (443), Expect = 5e-44
 Identities = 79/96 (82%), Positives = 86/96 (89%)
 Frame = +3

Query: 144 SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDT 323
           ++ +FGE R+TMRK+AAK KP     PWYG+D VLYLGPLSG+PPSYLTGEFPGDYGWDT
Sbjct: 18  AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 77

Query: 324 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           AGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 78  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 113

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  174 bits (442), Expect = 6e-44
 Identities = 83/105 (79%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  PSS+ + G  +VTMRKT  KAKP+    PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  174 bits (442), Expect = 6e-44
 Identities = 84/105 (80%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  PSS+ + G  +VTMRKTA+KAK V    PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  174 bits (441), Expect = 8e-44
 Identities = 83/105 (79%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GK VK  PSS+ + G  + TMRKTA KAKPV    PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  173 bits (438), Expect = 2e-43
 Identities = 81/104 (77%), Positives = 84/104 (80%)
 Frame = +3

Query: 120 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEF 299
           GKAV    SS + G  + TMRKT  KAKPV    PWYG D V YLGP SG+ PSYLTGEF
Sbjct: 15  GKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74

Query: 300 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  173 bits (438), Expect = 2e-43
 Identities = 83/105 (79%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  P+ S + GE R+TMRKTA K K V    PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  171 bits (434), Expect = 5e-43
 Identities = 82/105 (78%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  PSS+ + G  + TMRKT  KAKPV    PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  FPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  170 bits (430), Expect = 2e-42
 Identities = 81/105 (77%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           G AVK  PSS+ + G  +  MRKT  KAKPV    PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119



 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 261 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           ++G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 178 VAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  170 bits (430), Expect = 2e-42
 Identities = 81/105 (77%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVK-DLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK    SS + G  +VTMRKT  KAKP     PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 75  FPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  168 bits (426), Expect = 4e-42
 Identities = 76/93 (81%), Positives = 80/93 (86%)
 Frame = +3

Query: 153 LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGL 332
           +FGE R+TMRKTAAK KP     PWYG+D VLYLGPLSG PPSYLTGEFPGDYGWDT GL
Sbjct: 24  VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83

Query: 333 SADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           SADPETFAKNRELEVIHCRWA+   LGCVFPEL
Sbjct: 84  SADPETFAKNRELEVIHCRWAIAVGLGCVFPEL 116

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  167 bits (424), Expect = 8e-42
 Identities = 82/105 (78%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLP-SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  P +S +FG  RVTMRKT     P     PWYGSD V YLGP SG+PPSYLTGE
Sbjct: 15  GKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLTGE 72

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPEL
Sbjct: 73  FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEL 117

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  166 bits (420), Expect = 2e-41
 Identities = 78/104 (75%), Positives = 82/104 (78%)
 Frame = +3

Query: 120 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEF 299
           GKAV    SS +    +VTMRKT  KAKPV    PWYG D V YLGP SG+ PSYLTGEF
Sbjct: 15  GKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74

Query: 300 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL
Sbjct: 75  PGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPEL 118

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  165 bits (418), Expect = 4e-41
 Identities = 81/105 (77%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           G+AVK  PS+  + G  RV+MRKT AK  PV    PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSAPEITGNGRVSMRKTVAK--PVASSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  164 bits (416), Expect = 6e-41
 Identities = 75/92 (81%), Positives = 77/92 (83%)
 Frame = +3

Query: 156 FGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           FGE R+TMRKT  K K      PWYG D V YLGP SG+PPSYLTGEFPGDYGWDTAGLS
Sbjct: 23  FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82

Query: 336 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           ADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 83  ADPETFAKNRELEVIHSRWAMLGALGCVFPEL 114

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  164 bits (415), Expect = 8e-41
 Identities = 80/105 (76%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           G+AVK  PS S + G  R+TMRK  AK+ P     PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKSAP--SSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  162 bits (410), Expect = 3e-40
 Identities = 82/105 (78%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK+L SS+ + G+ARV+MRKTAA  K      PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKNLSSSSEVQGDARVSMRKTAATKK---VGSPWYGPDRVKYLGPFSGESPSYLTGE 71

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEL 116

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  161 bits (408), Expect = 5e-40
 Identities = 81/105 (77%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  PSS+ LFG  RV+MRKT    K      PWYG D V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGE 71

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 116

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  161 bits (408), Expect = 5e-40
 Identities = 76/96 (79%), Positives = 79/96 (82%), Gaps = 1/96 (1%)
 Frame = +3

Query: 147 SALFGEARVTMRK-TAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDT 323
           + + GEARVTMRK T  K        PWYG D VLYLGP SG+PPSYLTGEFPGDYGWDT
Sbjct: 31  AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90

Query: 324 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           AGLSADPE FAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 91  AGLSADPENFAKNRELEVIHCRWAMLGALGCVFPEL 126



 Score = 29.3 bits (64), Expect = 4.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 261 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           ++G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 185 IAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 235

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  161 bits (408), Expect = 5e-40
 Identities = 81/105 (77%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAVK  P+ S + G  RVTMRKT AK K      PWYGSD V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGS-PWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEL
Sbjct: 74  FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 118

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  161 bits (407), Expect = 7e-40
 Identities = 77/104 (74%), Positives = 81/104 (77%)
 Frame = +3

Query: 120 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEF 299
           GK +K  PSS   G AR TMRK+A   K      PWYG D V YLGP SG+ PSYLTGEF
Sbjct: 18  GKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 77

Query: 300 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL
Sbjct: 78  PGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 121

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  160 bits (406), Expect = 9e-40
 Identities = 79/105 (75%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           G+AVK  P++  + G A+ TMRKTA+K+  V    PWYG D V YLGP SG+PPSYLTGE
Sbjct: 5   GQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 63  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 107



 Score = 28.1 bits (61), Expect = 9.4
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 261 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           ++G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 166 IAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 216

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  159 bits (403), Expect = 2e-39
 Identities = 80/105 (76%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGE 296
           GKAV   P+ S + G  RVTMRKT AK K      PWYGSD V YLGP SG+ PSYLTGE
Sbjct: 15  GKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGS-PWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEL
Sbjct: 74  FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 118

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  159 bits (403), Expect = 2e-39
 Identities = 76/97 (78%), Positives = 80/97 (82%)
 Frame = +3

Query: 141 PSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWD 320
           PS+   G  RV+MRKTA+K   V    PWYG D V YLGP SG+PPSYLTGEFPGDYGWD
Sbjct: 3   PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60

Query: 321 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 61  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 97

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  158 bits (400), Expect = 5e-39
 Identities = 75/92 (81%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
 Frame = +3

Query: 159 GEARVTMRK-TAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           GEAR+TMRK T  K+       PWYG D VLYLGP SG+PPSYLTGEFPGDYGWDTAGLS
Sbjct: 39  GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98

Query: 336 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           ADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 99  ADPETFAKNRELEVIHSRWAMLGALGCVFPEL 130

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  158 bits (400), Expect = 5e-39
 Identities = 80/104 (76%), Positives = 83/104 (79%)
 Frame = +3

Query: 120 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEF 299
           GKAVK  PS+   G  RV+MRKT  K   V    PWYG D V YLGP SG+PPSYLTGEF
Sbjct: 16  GKAVKLGPSAPEVG--RVSMRKTVTKQ--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71

Query: 300 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 72  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 115



 Score = 28.1 bits (61), Expect = 9.4
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 261 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           ++G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 174 IAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 224

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  157 bits (398), Expect = 8e-39
 Identities = 74/92 (80%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
 Frame = +3

Query: 159 GEARVTMRK-TAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           GEAR+TMRK T  K+       PWYG D V+YLGP SG+PPSYLTGEFPGDYGWDTAGLS
Sbjct: 39  GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98

Query: 336 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           ADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 99  ADPETFAKNRELEVIHSRWAMLGALGCVFPEL 130

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  157 bits (397), Expect = 1e-38
 Identities = 74/97 (76%), Positives = 77/97 (79%)
 Frame = +3

Query: 141 PSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWD 320
           PSS   G AR TMRK+A   K      PWYG D V YLGP SG+ PSYLTGEFPGDYGWD
Sbjct: 24  PSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 83

Query: 321 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL
Sbjct: 84  TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  145 bits (365), Expect = 5e-35
 Identities = 68/92 (73%), Positives = 72/92 (78%)
 Frame = +3

Query: 156 FGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           FGE R+TMR+T   A        WYG D   YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FGEGRITMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85

Query: 336 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           ADPETFA+NRELEVIHCRWAMLGALGCVFPE+
Sbjct: 86  ADPETFARNRELEVIHCRWAMLGALGCVFPEI 117

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  145 bits (365), Expect = 5e-35
 Identities = 73/103 (70%), Positives = 76/103 (73%)
 Frame = +3

Query: 123 KAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFP 302
           K V +L      GEARV M    +KA        WYGSD  LYLGP SG PPSYL+GEFP
Sbjct: 18  KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74

Query: 303 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL
Sbjct: 75  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 117

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  141 bits (355), Expect = 8e-34
 Identities = 67/92 (72%), Positives = 70/92 (76%)
 Frame = +3

Query: 156 FGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           FG  R TMR+T   A        WYG D   YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FGGGRATMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85

Query: 336 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           ADPETFA+NRELEVIHCRWAMLGALGCVFPE+
Sbjct: 86  ADPETFARNRELEVIHCRWAMLGALGCVFPEI 117

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  140 bits (352), Expect = 2e-33
 Identities = 68/91 (74%), Positives = 72/91 (79%)
 Frame = +3

Query: 159 GEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSA 338
           G  RV+MR+T  K+ P      WYG D   YLGP S   PSYLTGEFPGDYGWDTAGLSA
Sbjct: 31  GGGRVSMRRTV-KSAPTSI---WYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86

Query: 339 DPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           DPETFAKNRELEVIHCRWAMLGALGCVFPE+
Sbjct: 87  DPETFAKNRELEVIHCRWAMLGALGCVFPEI 117

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  139 bits (351), Expect = 2e-33
 Identities = 67/92 (72%), Positives = 70/92 (76%)
 Frame = +3

Query: 156 FGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           F   RVTMR+T   A        WYG D   YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 2   FEGGRVTMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57

Query: 336 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           ADPETFA+NRELEVIHCRWAMLGALGCVFPE+
Sbjct: 58  ADPETFARNRELEVIHCRWAMLGALGCVFPEI 89

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  139 bits (350), Expect = 3e-33
 Identities = 63/77 (81%), Positives = 65/77 (84%)
 Frame = +3

Query: 201 KPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 380
           K      PW+G D V YLGP SG+ PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Sbjct: 4   KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63

Query: 381 HCRWAMLGALGCVFPEL 431
           H RWAMLGALGCVFPEL
Sbjct: 64  HSRWAMLGALGCVFPEL 80

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  139 bits (349), Expect = 4e-33
 Identities = 66/92 (71%), Positives = 69/92 (75%)
 Frame = +3

Query: 156 FGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           F   R TMR+T   A        WYG D   YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FNGGRATMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85

Query: 336 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           ADPETFA+NRELEVIHCRWAMLGALGCVFPE+
Sbjct: 86  ADPETFARNRELEVIHCRWAMLGALGCVFPEI 117

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  138 bits (348), Expect = 5e-33
 Identities = 66/90 (73%), Positives = 70/90 (77%)
 Frame = +3

Query: 162 EARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 341
           +AR+TMR+T   A        WYG D   YLGP S   PSYLTGEFPGDYGWDTA +SAD
Sbjct: 33  QARITMRRTVRSAPESI----WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88

Query: 342 PETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 89  PETFAKNRELEVIHCRWAMLGALGCVFPEL 118

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  138 bits (348), Expect = 5e-33
 Identities = 67/88 (76%), Positives = 69/88 (78%)
 Frame = +3

Query: 168 RVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE 347
           RV+MR+T   A        WYG D   YLGP S   PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 33  RVSMRRTIKSAPESI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88

Query: 348 TFAKNRELEVIHCRWAMLGALGCVFPEL 431
           TFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 89  TFAKNRELEVIHCRWAMLGALGCVFPEL 116

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  138 bits (347), Expect = 6e-33
 Identities = 67/92 (72%), Positives = 70/92 (76%)
 Frame = +3

Query: 156 FGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           FG+AR TMR+T   A        WYG D   YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FGQARFTMRRTVKSAPESI----WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85

Query: 336 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           ADPETFA+NRELEVIH RWAMLGALGC FPEL
Sbjct: 86  ADPETFARNRELEVIHSRWAMLGALGCTFPEL 117

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  134 bits (338), Expect = 7e-32
 Identities = 67/104 (64%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
 Frame = +3

Query: 123 KAVKDLPSSALFG-EARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEF 299
           K V +L    L   EARVTMR+T +K+        WYG+D   +LGP SG+ PSYL GEF
Sbjct: 19  KPVNELSRKVLGNVEARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEF 76

Query: 300 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
            GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PEL
Sbjct: 77  AGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120



 Score = 29.3 bits (64), Expect = 4.2
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 261 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           ++G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 179 VAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 229

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  134 bits (337), Expect = 9e-32
 Identities = 64/88 (72%), Positives = 68/88 (77%)
 Frame = +3

Query: 168 RVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE 347
           R+TMR+T   A        WYG D   YLGP S   PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 32  RITMRRTVKSAPQSI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87

Query: 348 TFAKNRELEVIHCRWAMLGALGCVFPEL 431
           TFA+NRELEVIH RWAMLGALGCVFPE+
Sbjct: 88  TFARNRELEVIHSRWAMLGALGCVFPEI 115



 Score = 28.1 bits (61), Expect = 9.4
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFG 224

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  133 bits (335), Expect = 2e-31
 Identities = 65/90 (72%), Positives = 71/90 (78%)
 Frame = +3

Query: 162 EARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 341
           + R +MR+T  KA P      WYG+D   +LGP S   PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31  DGRFSMRRTV-KAVPQSI---WYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 86

Query: 342 PETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PETFAKNRELEVIH RWAMLGALGC+FPEL
Sbjct: 87  PETFAKNRELEVIHSRWAMLGALGCIFPEL 116

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  129 bits (325), Expect = 2e-30
 Identities = 69/104 (66%), Positives = 74/104 (71%)
 Frame = +3

Query: 120 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEF 299
           G+A+K  PS+   G  RV+MRKTA K   V    PWYG D V YLGP SG+ PSYLTGEF
Sbjct: 15  GQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 72

Query: 300 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
            G        LSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 73  HG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 108

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  125 bits (315), Expect = 3e-29
 Identities = 56/69 (81%), Positives = 58/69 (84%)
 Frame = +3

Query: 225 WYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 404
           WYG D V YLGP S   PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 47  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106

Query: 405 ALGCVFPEL 431
           ALGC+FPE+
Sbjct: 107 ALGCIFPEV 115



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  125 bits (313), Expect = 6e-29
 Identities = 56/69 (81%), Positives = 58/69 (84%)
 Frame = +3

Query: 225 WYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 404
           WYG D V YLGP S   PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 50  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109

Query: 405 ALGCVFPEL 431
           ALGCVFPE+
Sbjct: 110 ALGCVFPEV 118



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 229

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  120 bits (302), Expect = 1e-27
 Identities = 54/58 (93%), Positives = 55/58 (94%)
 Frame = +3

Query: 258 PLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           P SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH  WAMLGALGCVFPEL
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEL 58



 Score = 28.1 bits (61), Expect = 9.4
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 261 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           ++G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 117 IAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 167

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  118 bits (296), Expect = 5e-27
 Identities = 66/99 (66%), Positives = 69/99 (69%), Gaps = 3/99 (3%)
 Frame = +3

Query: 144 SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDC---VLYLGPLSGDPPSYLTGEFPGDYG 314
           SS L   A  TM K AAK+K          S C   V YLGP SG+ PSYLTGEFPGDYG
Sbjct: 30  SSTLIVTAGFTMLKHAAKSKVSS-------STCDRRVKYLGPFSGEWPSYLTGEFPGDYG 82

Query: 315 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           WDTAGLSA PETFAKNRELEVIH R AM  ALGC+FPEL
Sbjct: 83  WDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPEL 121

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  117 bits (292), Expect = 2e-26
 Identities = 58/90 (64%), Positives = 65/90 (72%)
 Frame = +3

Query: 162 EARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 341
           +A  T +  AA AK       WYG D   +LGP S + P+YLTGEFPGDYGWDTAGLSAD
Sbjct: 20  KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77

Query: 342 PETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PETF K RELEVIH RWA+LGALG + PEL
Sbjct: 78  PETFKKYRELEVIHARWALLGALGILTPEL 107



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFG 217

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  115 bits (287), Expect = 6e-26
 Identities = 60/96 (62%), Positives = 69/96 (71%), Gaps = 2/96 (2%)
 Frame = +3

Query: 150 ALFGEARVTMRKTAAKAK-PVXXXXPWYGSDCVLYLGPLSGDP-PSYLTGEFPGDYGWDT 323
           AL    + T +KTAAKA  P      +YG +   +LGP S +  P+YLTGEFPGDYGWDT
Sbjct: 10  ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69

Query: 324 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           AGLSADPETF + RELE+IH RWAMLGALGC  PEL
Sbjct: 70  AGLSADPETFKRYRELELIHARWAMLGALGCQTPEL 105

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  107 bits (267), Expect = 1e-23
 Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
 Frame = +3

Query: 225 WYGSDCVLYLGPLS-GDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 401
           +YG D   +LGP S  D P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92

Query: 402 GALGCVFPEL 431
           GALG + PEL
Sbjct: 93  GALGILTPEL 102



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLG 214

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 46/86 (53%), Positives = 52/86 (60%)
 Frame = +3

Query: 174 TMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETF 353
           T +   A +K       +YG D       L    P   TGEFPGDYGWDTAGLSADPETF
Sbjct: 40  TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98

Query: 354 AKNRELEVIHCRWAMLGALGCVFPEL 431
            + RELE+IH R  +LGALG V PEL
Sbjct: 99  KRYRELELIHARCGLLGALGMVTPEL 124



 Score = 32.0 bits (71), Expect = 0.65
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
 Frame = +3

Query: 150 ALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYL--GPLS-GDPPSYLTGEFPGDYGWD 320
           ALF + +    K+ A ++       WYG D  ++L  G L   + P YL GE  GDYG+D
Sbjct: 37  ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96

Query: 321 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 428
             GL   PE FAK +  E+IH RWAMLGA G + PE
Sbjct: 97  PFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPE 132

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 29/53 (54%), Positives = 39/53 (73%)
 Frame = +3

Query: 273 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PP +L G  PGD+G+D  GL++DPE+   N++ E++HCRWAMLGA G   PEL
Sbjct: 74  PPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEL 126

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 68.2 bits (165), Expect = 8e-12
 Identities = 31/53 (58%), Positives = 38/53 (71%)
 Frame = +3

Query: 273 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PP YLTGE  GD G+D AGL+ADP TF + +  EV HCR +ML  +GC+ PEL
Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPEL 432



 Score = 64.7 bits (156), Expect = 9e-11
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = +3

Query: 264 SGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           + +PP+ LTGE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+ PEL
Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPEL 248



 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = +3

Query: 276 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 428
           PS+L GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G + P+
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPD 62

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = +3

Query: 273 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 428
           PP +L G  PGD+G+D  GL +DPE+   N + E++H RWAMLGA G   PE
Sbjct: 74  PPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPE 125

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +3

Query: 192 AKAKPVXXXXPWYGSDCVLYLGPLSGDP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRE 368
           A A PV      + S   +    + G P PSYL G  PGD+G+D+ GL   P    + +E
Sbjct: 27  AAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKE 86

Query: 369 LEVIHCRWAMLGALGCVFPE 428
            E+IHCRWAML   G + PE
Sbjct: 87  SELIHCRWAMLAVPGIIVPE 106

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 58.9 bits (141), Expect = 5e-09
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +3

Query: 273 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           PP++LTGE+P D G+D   ++ADP  +A+ R  EV H R +ML  +G + PEL
Sbjct: 168 PPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPEL 220



 Score = 32.0 bits (71), Expect = 0.65
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 342 PETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           P  + + R  EV + R AML  +GCV+PEL
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPEL 30

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = +3

Query: 276 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 431
           P YLTG   GD G+D  GL+ DPE      + E+++ RWAMLG  G + PE+
Sbjct: 64  PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEV 115

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +3

Query: 276 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAML  LG
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 27/46 (58%)
 Frame = +3

Query: 276 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +3

Query: 276 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
 Frame = +3

Query: 279 SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPEL 431
           SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+AMLGA G + PE+
Sbjct: 64  SYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 119

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>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPW 227
           GKAVK  PSS+ + G  R+TMRKTAAK KP     PW
Sbjct: 15  GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51

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>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPW 227
           GK VK  PSS+ + G  R+TMRKTAAK KP     PW
Sbjct: 15  GKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 40/149 (26%), Positives = 50/149 (33%), Gaps = 47/149 (31%)
 Frame = +3

Query: 123 KAVKDLPSSALFGEARV---TMRKTAAKAKPVXXXXP-WYGSDCVLYLGPLSGDPPSYLT 290
           + V D+ S++    AR    T + +  KAK V    P W+               P YL 
Sbjct: 17  RVVSDISSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPG----------AKSPEYLD 66

Query: 291 GEFPGDYGWDTAGLSADPE-----------TFAKN------------------------- 362
           G   GDYG+D  GL    E             AKN                         
Sbjct: 67  GSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSE 126

Query: 363 -------RELEVIHCRWAMLGALGCVFPE 428
                  RE E+IH RWAML  LG +  E
Sbjct: 127 VFGLQRFRECELIHGRWAMLATLGAITVE 155



 Score = 32.7 bits (73), Expect = 0.38
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG   +D  GL++DP   A+ +  E+ H R AM+G LG
Sbjct: 214 YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +3

Query: 252 LGPLSGDPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 425
           + P +G   S L  G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G +  
Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191

Query: 426 E 428
           E
Sbjct: 192 E 192

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 37/134 (27%), Positives = 47/134 (35%), Gaps = 43/134 (32%)
 Frame = +3

Query: 156 FGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           FG+ +   +K+A K   V    P +      Y G +S   P +L G   GDYG+D  GL 
Sbjct: 36  FGKKKAAPKKSAKKT--VTTDRPLW------YPGAIS---PDWLDGSLVGDYGFDPFGLG 84

Query: 336 ADPE-----------TFAKN--------------------------------RELEVIHC 386
              E             AKN                                RE E+IH 
Sbjct: 85  KPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHG 144

Query: 387 RWAMLGALGCVFPE 428
           RWAML  LG +  E
Sbjct: 145 RWAMLATLGALSVE 158



 Score = 34.7 bits (78), Expect = 0.10
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 413
           +PG   +D  GL+ADPE  A+ +  E+ H R AM+  LG
Sbjct: 217 YPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 43/96 (44%)
 Frame = +3

Query: 270 DPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------ 362
           +PP +L G   GD G+D  GL    E             AKN                  
Sbjct: 64  NPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPT 123

Query: 363 --------------RELEVIHCRWAMLGALGCVFPE 428
                         RE E+IH RWAMLG LG +  E
Sbjct: 124 PFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVE 159



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 297 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 410
           +PG Y +D  GL+ADPE     +  E+ H R AM+  L
Sbjct: 218 YPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 28/96 (29%), Positives = 32/96 (33%), Gaps = 45/96 (46%)
 Frame = +3

Query: 276 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 362
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 363 --------------RELEVIHCRWAMLGALGCVFPE 428
                         RE E+IH RWAML  LG +  E
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE 154

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>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPW 227
           G+AVK  PS S + G  R+TMRK  AK+ P     PW
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKSAP--SSSPW 49

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>SHC1_HUMAN (P29353) SHC transforming protein 1 (SH2 domain protein C1) (Src|
           homology 2 domain-containing transforming protein C1)
          Length = 583

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 226 GTAPTACSTSARSPATPR---AT*PVSFPVTTDGTLRGSLPTPRPLP 357
           G AP A   +A +  TP    AT PV  PV  D  +R  +P P P P
Sbjct: 371 GAAPGAARPTAPNAQTPSHLGATLPVGQPVGGDPEVRKQMPPPPPCP 417

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>DOCK5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)|
          Length = 804

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +1

Query: 226 GTAPTACSTSARSPATPRAT*PVSFP-VTTDGTLRGSLPTPRP---LPRTGSWR*ST 384
           G++P   +  +  P TP+AT  +S P + TDG     +P P P    P  GS R ST
Sbjct: 713 GSSPPQSTPLSPPPLTPKATRTLSSPSLQTDGIAATPVPPPPPPKSKPYEGSQRNST 769

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>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPW 227
           G+AVK  PS S   G  R+TMRK  AK+ P     PW
Sbjct: 15  GQAVKLSPSASENSGNGRITMRKAVAKSAP--SSSPW 49

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>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
 Frame = -3

Query: 421  KTQPSAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGNSPVK*LGG----SPES-G 257
            + + SAP+  H Q + S+S+ L  ++ S+ SP+   P +P   P   LG     SPE+ G
Sbjct: 1343 RRKKSAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLLYPQMALGTSSAISPETDG 1402

Query: 256  PR 251
            PR
Sbjct: 1403 PR 1404

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>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
 Frame = +3

Query: 159 GEARVTMRKTAAKAKP-VXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 335
           G A   +R T  +    V    PW+G +    L    G P  + +  FPG  G    G+ 
Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166

Query: 336 ADPETFAKNRELEVIHCR 389
           AD    A  R++   H R
Sbjct: 167 ADR---AYGRDIVEAHYR 181

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>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator|
            of retinoic acid and thyroid hormone receptor) (SMRT)
            (SMRTe) (Thyroid-, retinoic-acid-receptor-associated
            corepressor) (T3 receptor-associating factor) (TRAC)
          Length = 2472

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +1

Query: 241  ACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPT---PRPLPRTGS 369
            A STS  SP  P AT P +      GTL G  PT   P  LP+  S
Sbjct: 1856 ARSTSTSSPVRPAATFPPATHCPLGGTLEGVYPTLMEPVLLPKETS 1901

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>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 7)
            (ATP-energized glutathione S-conjugate pump 7)
          Length = 1493

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 391  HRQWITSSSRFLAKVSGSAESPAVSH 314
            +RQ+  S++R LA++SG + SP V H
Sbjct: 1076 YRQYYISAARELARLSGISRSPLVQH 1101

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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 229 TAPTACST--SARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRT 363
           +AP   ST  S+ +P T   T   S PVT+  T   S P P P   T
Sbjct: 419 SAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSST 465

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>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)|
          Length = 586

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = +1

Query: 226 GTAPTACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRTGS 369
           GTA  + +TSA SP   R   P   P           P P P P  GS
Sbjct: 41  GTATASAATSAASPGPERRPPPAQAPAPQPA------PQPAPTPSVGS 82

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>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase)
          Length = 392

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 165 ARVTMRKTAAKA-KPVXXXXPWYGSDCVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 341
           A   +R T  K  + V    PW+G +    L  ++G P  +    FPG  G    G+ AD
Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168

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>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich|
           protein 1)
          Length = 254

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 21/93 (22%), Positives = 33/93 (35%)
 Frame = -3

Query: 430 SSGKTQPSAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGNSPVK*LGGSPESGPR 251
           +S    PS+ +        SSS      + S+ S A S   +P +S  K    +P S   
Sbjct: 113 ASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAPSSSEAKSSSAAPSSSEA 172

Query: 250 *STQSEPYHXXXXXXXXXXXXXLRMVTRASPKS 152
            S+ + P                  +T A+P S
Sbjct: 173 KSSSAAPSSSEAKSSSAAPSSTEAKITSAAPSS 205

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>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington|
           disease gene regulatory region-binding protein 1)
           (HDBP-1)
          Length = 387

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
 Frame = +3

Query: 126 AVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDCVLYLGP----LSGDPPSYLTG 293
           A +  P  A   E       T+    P+    P         L P    L   P SY + 
Sbjct: 92  AQRATPGKARLDEVMAAAALTSLSTSPLLLGAPVAAFSPEPGLEPWKEALVRPPGSYSSS 151

Query: 294 EFPGDYGWDTAGLSADPET 350
              GD+GWD A   + P T
Sbjct: 152 SNSGDWGWDLASDQSSPST 170

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>FPGT_HUMAN (O14772) Fucose-1-phosphate guanylyltransferase (EC 2.7.7.30)|
           (GDP-L-fucose pyrophosphorylase) (GDP-L-fucose
           diphosphorylase)
          Length = 594

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 311 RMGHCGALCRPRDLCQEPGAGGD 379
           +M    A+CRP + CQ+  AGGD
Sbjct: 235 KMYQFNAVCRPGNFCQQDFAGGD 257

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>KAS2_STRGA (P16539) Tetracenomycin C polyketide putative beta-ketoacyl|
           synthase 2 (EC 2.3.1.-)
          Length = 409

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -2

Query: 395 GPPAVDHLQLPVLGKGLGVGREPRSVPSVVTGKL-TGQVARGVA 267
           G PA+D  +   L +  G G  P + P  +TG+L  G  A  VA
Sbjct: 305 GVPALDRAEAEALAEVFGPGAVPVTAPKTMTGRLYAGGAALDVA 348

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>HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 304

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = -2

Query: 431 QLGEDAAERAEHGPPAVDHLQLPVLGKGLGVGREPRSVP 315
           +L E AAER  HG PA  H    V G G G  R   +VP
Sbjct: 82  ELEEQAAERRRHGLPAAYH---AVRGVGFGQCRLMLAVP 117

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>HISZ_SYNP7 (Q55267) ATP phosphoribosyltransferase regulatory subunit|
          Length = 420

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 416 AAERAEHGPPAVDHLQLPVLGKGLG 342
           AA R  H PPA+D L +PV  +  G
Sbjct: 330 AANRLPHRPPAIDQLVIPVDSEAYG 354


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,412,804
Number of Sequences: 219361
Number of extensions: 936816
Number of successful extensions: 3662
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 3350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3632
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result