ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet39g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 58 5e-09
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 50 2e-06
3Y1546_METJA (Q58941) UPF0219 protein MJ1546 28 4.4

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 222 FHRPTGRFCDGRLIIDFLCESLNISYLSPYLKALG 326
           FHR TGR+ DGRLIIDF+ ES N+ YLSPYL +LG
Sbjct: 64  FHRSTGRYSDGRLIIDFIAESFNLPYLSPYLSSLG 98



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = +3

Query: 222 FHRPTGRFCDGRLIIDFLCESLNISYLSPYLKALG 326
           F  P GR+CDGRL+IDF+ ESL + YLS +L ++G
Sbjct: 60  FGSPAGRYCDGRLVIDFIAESLGLPYLSAFLDSVG 94



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>Y1546_METJA (Q58941) UPF0219 protein MJ1546|
          Length = 345

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 189 GARPVVFNFGAFHRPTGRF-CDGRLIIDFLCESLNISYLSPYL 314
           G +P  +++  FH+P G+F      I+ F  E   I  L+PY+
Sbjct: 222 GTKPEDYDYCVFHQPNGKFYIRVAKILGFKEEQYKIGLLTPYI 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,775,505
Number of Sequences: 219361
Number of extensions: 252338
Number of successful extensions: 513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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