ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet39g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_187694.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2028 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 172 ccggcgtacctctccgacgacctcaacacggacgcgcaggcgctggaggcgctgcgcaag 231 |||| |||| ||||||||||||||||||| |||||||||||| || |||||||||| | Sbjct: 61 ccggggtacttctccgacgacctcaacaccgacgcgcaggcgttgcaggcgctgcggtcg 120 Query: 232 gcggtgggccggtccgcgctgccgtcgtggaacagcagcacgcagacgtgccagtggcag 291 |||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 121 gcggtggggaagtcggcgctgccgtcgtggaacagcagcacgccgacgtgcaattggcag 180 Query: 292 ggcgtggcctgcgagaacggccgcgtcgtcgagctccgcctccccggcgccgggctcatc 351 || ||| | ||||||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 181 ggggtgacgtgcgagagcggccgcgtcaccgagctccgcctccccggcgccggcctcatg 240 Query: 352 ggagcgctcccctcgggcgtgctcggcaacctcaccgcgctccgcacgctctccctccgc 411 || | ||||| ||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 241 ggcaccctcccgtcgaacgtgctcggcaacctctccgcgctccgcacgctctccctccgc 300 Query: 412 tggaacgcgctcacgggccccatccccgacgacgtctcccgc 453 | |||||||||||||||||||||||||||||| |||||||| Sbjct: 301 tacaacgcgctcacgggccccatccccgacgacctctcccgc 342
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 172 ccggcgtacctctccgacgacctcaacacggacgcgcaggcgctggaggcgctgcgcaag 231 |||| |||| ||||||||||||||||||| |||||||||||| || |||||||||| | Sbjct: 6403373 ccggggtacttctccgacgacctcaacaccgacgcgcaggcgttgcaggcgctgcggtcg 6403432 Query: 232 gcggtgggccggtccgcgctgccgtcgtggaacagcagcacgcagacgtgccagtggcag 291 |||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 6403433 gcggtggggaagtcggcgctgccgtcgtggaacagcagcacgccgacgtgcaattggcag 6403492 Query: 292 ggcgtggcctgcgagaacggccgcgtcgtcgagctccgcctccccggcgccgggctcatc 351 || ||| | ||||||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 6403493 ggggtgacgtgcgagagcggccgcgtcaccgagctccgcctccccggcgccggcctcatg 6403552 Query: 352 ggagcgctcccctcgggcgtgctcggcaacctcaccgcgctccgcacgctctccctccgc 411 || | ||||| ||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 6403553 ggcaccctcccgtcgaacgtgctcggcaacctctccgcgctccgcacgctctccctccgc 6403612 Query: 412 tggaacgcgctcacgggccccatccccgacgacgtctcccgc 453 | |||||||||||||||||||||||||||||| |||||||| Sbjct: 6403613 tacaacgcgctcacgggccccatccccgacgacctctcccgc 6403654 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 99 gccgccggcgatggcggcaatgccggggccggc 131 |||||||||||||||| ||||||||| |||||| Sbjct: 6403303 gccgccggcgatggcgccaatgccggcgccggc 6403335 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ctcgccgcccgccttcctcc 90 |||||||||||||||||||| Sbjct: 35322245 ctcgccgcccgccttcctcc 35322264
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 172 ccggcgtacctctccgacgacctcaacacggacgcgcaggcgctggaggcgctgcgcaag 231 |||| |||| ||||||||||||||||||| |||||||||||| || |||||||||| | Sbjct: 83499 ccggggtacttctccgacgacctcaacaccgacgcgcaggcgttgcaggcgctgcggtcg 83558 Query: 232 gcggtgggccggtccgcgctgccgtcgtggaacagcagcacgcagacgtgccagtggcag 291 |||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 83559 gcggtggggaagtcggcgctgccgtcgtggaacagcagcacgccgacgtgcaattggcag 83618 Query: 292 ggcgtggcctgcgagaacggccgcgtcgtcgagctccgcctccccggcgccgggctcatc 351 || ||| | ||||||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 83619 ggggtgacgtgcgagagcggccgcgtcaccgagctccgcctccccggcgccggcctcatg 83678 Query: 352 ggagcgctcccctcgggcgtgctcggcaacctcaccgcgctccgcacgctctccctccgc 411 || | ||||| ||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 83679 ggcaccctcccgtcgaacgtgctcggcaacctctccgcgctccgcacgctctccctccgc 83738 Query: 412 tggaacgcgctcacgggccccatccccgacgacgtctcccgc 453 | |||||||||||||||||||||||||||||| |||||||| Sbjct: 83739 tacaacgcgctcacgggccccatccccgacgacctctcccgc 83780 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 99 gccgccggcgatggcggcaatgccggggccggc 131 |||||||||||||||| ||||||||| |||||| Sbjct: 83429 gccgccggcgatggcgccaatgccggcgccggc 83461
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 172 ccggcgtacctctccgacgacctcaacacggacgcgcaggcgctggaggcgctgcgcaag 231 |||| |||| ||||||||||||||||||| |||||||||||| || |||||||||| | Sbjct: 6402586 ccggggtacttctccgacgacctcaacaccgacgcgcaggcgttgcaggcgctgcggtcg 6402645 Query: 232 gcggtgggccggtccgcgctgccgtcgtggaacagcagcacgcagacgtgccagtggcag 291 |||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 6402646 gcggtggggaagtcggcgctgccgtcgtggaacagcagcacgccgacgtgcaattggcag 6402705 Query: 292 ggcgtggcctgcgagaacggccgcgtcgtcgagctccgcctccccggcgccgggctcatc 351 || ||| | ||||||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 6402706 ggggtgacgtgcgagagcggccgcgtcaccgagctccgcctccccggcgccggcctcatg 6402765 Query: 352 ggagcgctcccctcgggcgtgctcggcaacctcaccgcgctccgcacgctctccctccgc 411 || | ||||| ||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 6402766 ggcaccctcccgtcgaacgtgctcggcaacctctccgcgctccgcacgctctccctccgc 6402825 Query: 412 tggaacgcgctcacgggccccatccccgacgacgtctcccgc 453 | |||||||||||||||||||||||||||||| |||||||| Sbjct: 6402826 tacaacgcgctcacgggccccatccccgacgacctctcccgc 6402867 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 99 gccgccggcgatggcggcaatgccggggccggc 131 |||||||||||||||| ||||||||| |||||| Sbjct: 6402516 gccgccggcgatggcgccaatgccggcgccggc 6402548 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ctcgccgcccgccttcctcc 90 |||||||||||||||||||| Sbjct: 35412317 ctcgccgcccgccttcctcc 35412336
>dbj|AK065199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E20, full insert sequence Length = 2451 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 172 ccggcgtacctctccgacgacctcaacacggacgcgcaggcgctggaggcgctgcgcaag 231 |||| |||| ||||||||||||||||||| |||||||||||| || |||||||||| | Sbjct: 192 ccggggtacttctccgacgacctcaacaccgacgcgcaggcgttgcaggcgctgcggtcg 251 Query: 232 gcggtgggccggtccgcgctgccgtcgtggaacagcagcacgcagacgtgccagtggcag 291 |||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 252 gcggtggggaagtcggcgctgccgtcgtggaacagcagcacgccgacgtgcaattggcag 311 Query: 292 ggcgtggcctgcgagaacggccgcgtcgtcgagctccgcctccccggcgccgggctcatc 351 || ||| | ||||||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 312 ggggtgacgtgcgagagcggccgcgtcaccgagctccgcctccccggcgccggcctcatg 371 Query: 352 ggagcgctcccctcgggcgtgctcggcaacctcaccgcgctccgcacgctctccctccgc 411 || | ||||| ||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 372 ggcaccctcccgtcgaacgtgctcggcaacctctccgcgctccgcacgctctccctccgc 431 Query: 412 tggaacgcgctcacgggccccatccccgacgacgtctcccgc 453 | |||||||||||||||||||||||||||||| |||||||| Sbjct: 432 tacaacgcgctcacgggccccatccccgacgacctctcccgc 473 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 99 gccgccggcgatggcggcaatgccggggccggc 131 |||||||||||||||| ||||||||| |||||| Sbjct: 122 gccgccggcgatggcgccaatgccggcgccggc 154
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 315 cgtcgtcgagctccgcctccccggcgccgggctcatcgg 353 |||||||| ||||||||||||||||| ||| |||||||| Sbjct: 97260 cgtcgtcgcgctccgcctccccggcgtcggcctcatcgg 97298
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 315 cgtcgtcgagctccgcctccccggcgccgggctcatcgg 353 |||||||| ||||||||||||||||| ||| |||||||| Sbjct: 13429 cgtcgtcgcgctccgcctccccggcgtcggcctcatcgg 13467
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 315 cgtcgtcgagctccgcctccccggcgccgggctcatcgg 353 |||||||| ||||||||||||||||| ||| |||||||| Sbjct: 29087205 cgtcgtcgcgctccgcctccccggcgtcggcctcatcgg 29087243 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 312 ccgcgtcgtcgagctccgcctccccggcg 340 |||||||||||| ||||||| |||||||| Sbjct: 2982365 ccgcgtcgtcgatctccgccgccccggcg 2982393
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 97 acgccgccggcgatggcggcaat 119 ||||||||||||||||||||||| Sbjct: 3862301 acgccgccggcgatggcggcaat 3862323
>ref|XM_478236.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1146 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 315 cgtcgtcgagctccgcctccccggcgccgg 344 ||||||| |||||||||||| ||||||||| Sbjct: 412 cgtcgtccagctccgcctccgcggcgccgg 383
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 207 gcaggcgctggaggcgctgcgcaaggcggt 236 ||||||| |||| ||||||||||||||||| Sbjct: 5614601 gcaggcggtggaagcgctgcgcaaggcggt 5614572
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 196 aacacggacgcgcaggcgctgg 217 |||||||||||||||||||||| Sbjct: 127421 aacacggacgcgcaggcgctgg 127400 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 gggccggtccgcgctgccgtc 257 ||||||||||||||||||||| Sbjct: 113444 gggccggtccgcgctgccgtc 113424
>ref|XM_843605.1| PREDICTED: Canis familiaris similar to amyloid beta (A4) precursor protein-binding, family A, member 2, transcript variant 3 (LOC488700), mRNA Length = 2271 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 323 agctccgcctccccggcgccgggctc 348 ||||||||||||||| |||||||||| Sbjct: 107 agctccgcctccccgccgccgggctc 82
>ref|XM_545817.2| PREDICTED: Canis familiaris similar to amyloid beta (A4) precursor protein-binding, family A, member 2, transcript variant 2 (LOC488700), mRNA Length = 2235 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 323 agctccgcctccccggcgccgggctc 348 ||||||||||||||| |||||||||| Sbjct: 107 agctccgcctccccgccgccgggctc 82
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 gccgccggcgatggcggcaatgccgg 124 |||||||||||||||||| ||||||| Sbjct: 3629168 gccgccggcgatggcggctatgccgg 3629143
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 205 gcgcaggcgctggaggcgctgc 226 |||||||||||||||||||||| Sbjct: 320905 gcgcaggcgctggaggcgctgc 320884
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 255 gtcgtggaacagcagcacgcag 276 |||||||||||||||||||||| Sbjct: 99104 gtcgtggaacagcagcacgcag 99125
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 gtcgtggaacagcagcacgcag 276 |||||||||||||||||||||| Sbjct: 30768 gtcgtggaacagcagcacgcag 30747
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 cgtcgtcgagctccgcctccccggcgccgg 344 ||||||| |||||||||||| ||||||||| Sbjct: 18753803 cgtcgtccagctccgcctccgcggcgccgg 18753832
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 204 cgcgcaggcgctggaggcgctg 225 |||||||||||||||||||||| Sbjct: 4975552 cgcgcaggcgctggaggcgctg 4975531 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 cgtcgagctccgcctccccggcgc 341 |||||||| ||||||||||||||| Sbjct: 4722563 cgtcgagcaccgcctccccggcgc 4722540
>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0055I24 Length = 155872 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 cgtcgtcgagctccgcctccccggcgccgg 344 ||||||| |||||||||||| ||||||||| Sbjct: 86091 cgtcgtccagctccgcctccgcggcgccgg 86120
>gb|L25440.1|RHMFTSZ Rhizobium meliloti ftsZ gene, complete cds Length = 1517 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 aacacggacgcgcaggcgctgg 217 |||||||||||||||||||||| Sbjct: 235 aacacggacgcgcaggcgctgg 256
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 217 gaggcgctgcgcaaggcggtgggcc 241 |||||||||| |||||||||||||| Sbjct: 966229 gaggcgctgctcaaggcggtgggcc 966253
>ref|XM_482490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 374 tcggcaacctcaccgcgctccgcacgctctccctccg 410 ||||||||||||||||||| || ||||| || ||||| Sbjct: 275 tcggcaacctcaccgcgctgcggacgctgtcgctccg 311
>ref|XM_464449.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2162 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 85 tcctcctactccacgccgccggcgatggc 113 ||||||| |||| |||||||||||||||| Sbjct: 92 tcctcctcctcctcgccgccggcgatggc 120
>ref|XM_506744.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.5-1 mRNA Length = 2227 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 85 tcctcctactccacgccgccggcgatggc 113 ||||||| |||| |||||||||||||||| Sbjct: 125 tcctcctcctcctcgccgccggcgatggc 153
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 413 ggaacgcgctcacgggccccatccc 437 ||||||||||||||||||| ||||| Sbjct: 60774 ggaacgcgctcacgggcccgatccc 60750
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 312 ccgcgtcgtcgagctccgcctccccggcg 340 |||||||||||| ||||||| |||||||| Sbjct: 76381 ccgcgtcgtcgatctccgccgccccggcg 76409
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 104 cggcgatggcggcaatgccggggccggcg 132 |||| |||||||||||| ||||||||||| Sbjct: 3732645 cggcaatggcggcaatggcggggccggcg 3732617 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 aggcgctgcgcaaggcggtgg 238 ||||||||||||||||||||| Sbjct: 1083726 aggcgctgcgcaaggcggtgg 1083706
>gb|AY394005.1| Bacteriophage D3112, complete genome Length = 37611 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 caggcgctggaggcgctgcgc 228 ||||||||||||||||||||| Sbjct: 27445 caggcgctggaggcgctgcgc 27465
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 aacacggacgcgcaggcgctg 216 ||||||||||||||||||||| Sbjct: 4337172 aacacggacgcgcaggcgctg 4337152
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 104 cggcgatggcggcaatgccggggccggcg 132 |||| |||||||||||| ||||||||||| Sbjct: 272829 cggcaatggcggcaatggcggggccggcg 272801
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 aggcgctgcgcaaggcggtgg 238 ||||||||||||||||||||| Sbjct: 49926 aggcgctgcgcaaggcggtgg 49906
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 104 cggcgatggcggcaatgccggggccggcg 132 |||| |||||||||||| ||||||||||| Sbjct: 250871 cggcaatggcggcaatggcggggccggcg 250843
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 aggcgctgcgcaaggcggtgg 238 ||||||||||||||||||||| Sbjct: 97152 aggcgctgcgcaaggcggtgg 97132
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 gccgtcgtggaacagcagcacgcag 276 ||||||||||||||||| ||||||| Sbjct: 1841461 gccgtcgtggaacagcaacacgcag 1841437
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 413 ggaacgcgctcacgggccccatccc 437 ||||||||||||||||||| ||||| Sbjct: 6935516 ggaacgcgctcacgggcccgatccc 6935492
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 374 tcggcaacctcaccgcgctccgcacgctctccctccg 410 ||||||||||||||||||| || ||||| || ||||| Sbjct: 20561858 tcggcaacctcaccgcgctgcggacgctgtcgctccg 20561822 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 309 cggccgcgtcgtcgagctccgcctccccggcgccgggctc 348 ||||| ||||| |||||| ||||||||||||| |||||| Sbjct: 10138108 cggccacgtcgcggagctcagcctccccggcgcagggctc 10138069
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 374 tcggcaacctcaccgcgctccgcacgctctccctccg 410 ||||||||||||||||||| || ||||| || ||||| Sbjct: 3660114 tcggcaacctcaccgcgctgcggacgctgtcgctccg 3660078 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tcggcaacctcaccgcgctc 393 |||||||||||||||||||| Sbjct: 28494141 tcggcaacctcaccgcgctc 28494122 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctccacgccgccggcgatggcggc 116 ||||||||||||||| |||||||| Sbjct: 1815242 ctccacgccgccggcaatggcggc 1815265
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 85 tcctcctactccacgccgccggcgatggc 113 ||||||| |||| |||||||||||||||| Sbjct: 5306312 tcctcctcctcctcgccgccggcgatggc 5306284 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 415 aacgcgctcacgggccccatccccgacg 442 ||||| ||||| |||||||||||||||| Sbjct: 35728726 aacgccctcaccggccccatccccgacg 35728699
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 374 tcggcaacctcaccgcgctccgcacgctctccctccg 410 ||||||||||||||||||| || ||||| || ||||| Sbjct: 54342 tcggcaacctcaccgcgctgcggacgctgtcgctccg 54306
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 gagaacggccgcgtcgtcgag 324 ||||||||||||||||||||| Sbjct: 2321599 gagaacggccgcgtcgtcgag 2321619
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 85 tcctcctactccacgccgccggcgatggc 113 ||||||| |||| |||||||||||||||| Sbjct: 32615 tcctcctcctcctcgccgccggcgatggc 32587
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 374 tcggcaacctcaccgcgctccgcacgctctccctccg 410 ||||||||||||||||||| || ||||| || ||||| Sbjct: 65819 tcggcaacctcaccgcgctgcggacgctgtcgctccg 65783
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 374 tcggcaacctcaccgcgctccgcacgctctccctccg 410 ||||||||||||||||||| || ||||| || ||||| Sbjct: 36230 tcggcaacctcaccgcgctgcggacgctgtcgctccg 36194
>dbj|AK121281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108L07, full insert sequence Length = 2162 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 85 tcctcctactccacgccgccggcgatggc 113 ||||||| |||| |||||||||||||||| Sbjct: 92 tcctcctcctcctcgccgccggcgatggc 120
>dbj|AK120869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026A17, full insert sequence Length = 2226 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 85 tcctcctactccacgccgccggcgatggc 113 ||||||| |||| |||||||||||||||| Sbjct: 125 tcctcctcctcctcgccgccggcgatggc 153
>dbj|AK111558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054D24, full insert sequence Length = 3492 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 413 ggaacgcgctcacgggccccatccc 437 ||||||||||||||||||| ||||| Sbjct: 1893 ggaacgcgctcacgggcccgatccc 1917
>dbj|AK105669.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A03, full insert sequence Length = 2627 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 413 ggaacgcgctcacgggccccatccc 437 ||||||||||||||||||| ||||| Sbjct: 947 ggaacgcgctcacgggcccgatccc 971
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 203 acgcgcaggcgctggaggcgctgcgcaag 231 |||||||||| | |||||||||||||||| Sbjct: 584419 acgcgcaggcacaggaggcgctgcgcaag 584391
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 cgcgcaggcgctggaggcgctgcgc 228 ||||||| ||||||||||||||||| Sbjct: 1468108 cgcgcagtcgctggaggcgctgcgc 1468132
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 gcgctggaggcgctgcgcaaggcgg 235 |||||||||||| |||||||||||| Sbjct: 4236237 gcgctggaggcggtgcgcaaggcgg 4236261
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 413 ggaacgcgctcacgggccccatccc 437 ||||||||||||||||||| ||||| Sbjct: 7001983 ggaacgcgctcacgggcccgatccc 7001959
>gb|AC116683.7| Mus musculus chromosome 7, clone RP24-472H13, complete sequence Length = 126085 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tgtgtttttcttctcctccat 31 ||||||||||||||||||||| Sbjct: 17656 tgtgtttttcttctcctccat 17676
>ref|NM_113488.1| Arabidopsis thaliana unknown protein AT3G25855 mRNA, complete cds Length = 554 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcttctcctccatggccat 37 |||||||||||||||||||| Sbjct: 283 ttcttctcctccatggccat 264
>ref|XM_481134.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2307 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 309 cggccgcgtcgtcgagctccgcctccccggcgccgggctc 348 ||||| ||||| |||||| ||||||||||||| |||||| Sbjct: 249 cggccacgtcgcggagctcagcctccccggcgcagggctc 288
>ref|XM_468538.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1865 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 415 aacgcgctcacgggccccatccccgacg 442 ||||| ||||| |||||||||||||||| Sbjct: 568 aacgccctcaccggccccatccccgacg 595
>ref|NM_185204.1| Oryza sativa (japonica cultivar-group), mRNA Length = 504 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ctcgccgcccgccttcctcc 90 |||||||||||||||||||| Sbjct: 60 ctcgccgcccgccttcctcc 79
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctccacgccgccggcgatggcggc 116 ||||||||||||||| |||||||| Sbjct: 135534 ctccacgccgccggcaatggcggc 135557
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gctggcccttgcggtgctggcgct 158 ||||||||||||||||| |||||| Sbjct: 1057451 gctggcccttgcggtgcaggcgct 1057428
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 acggccgcgtcgtcgagctc 327 |||||||||||||||||||| Sbjct: 1307675 acggccgcgtcgtcgagctc 1307656
>gb|AC116507.9| Mus musculus chromosome 19, clone RP24-309C17, complete sequence Length = 168364 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cgccttcctcctactccacg 99 |||||||||||||||||||| Sbjct: 130873 cgccttcctcctactccacg 130892
>ref|XM_425255.1| PREDICTED: Gallus gallus similar to transmembrane protein 6-like (LOC427681), mRNA Length = 2901 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 gccagtggcagggcgtggcctgcg 304 |||||||||||||||||| ||||| Sbjct: 2206 gccagtggcagggcgtgggctgcg 2183
>gb|DQ193344.1| Homo sapiens 217-4 HIV-1 integration site genomic sequence Length = 545 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccgcccgccttcctccta 92 |||||||||||||||||||| Sbjct: 434 cgccgcccgccttcctccta 415
>ref|XM_581492.2| PREDICTED: Bos taurus similar to TFIIH basal transcription factor complex helicase subunit (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D complementing protein) (CXPD) (DNA excision repair protein ERCC-2) (LOC505237), mRNA Length = 2798 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggcctgcgagaacggccgcg 316 |||||||||||||||||||| Sbjct: 1789 ggcctgcgagaacggccgcg 1808
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 acggccgcgtcgtcgagctc 327 |||||||||||||||||||| Sbjct: 2152324 acggccgcgtcgtcgagctc 2152343
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gctggaggcgctgcgcaagg 232 |||||||||||||||||||| Sbjct: 1055258 gctggaggcgctgcgcaagg 1055277
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cggacgcgcaggcgctggag 219 |||||||||||||||||||| Sbjct: 67368 cggacgcgcaggcgctggag 67387
>ref|XM_842814.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0885) partial mRNA Length = 1935 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gctggaggcgctgcgcaagg 232 |||||||||||||||||||| Sbjct: 1311 gctggaggcgctgcgcaagg 1330
>gb|BC100156.1| Rattus norvegicus WD repeat domain 5, mRNA (cDNA clone MGC:114572 IMAGE:7462311), complete cds Length = 3140 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 tttcttctcctccatggccatggc 40 ||||||||||||| |||||||||| Sbjct: 385 tttcttctcctccgtggccatggc 362
>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete sequence Length = 129844 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gtgtgtgtttttcttctcct 27 |||||||||||||||||||| Sbjct: 120252 gtgtgtgtttttcttctcct 120233
>gb|CP000317.1| Polaromonas sp. JS666 plasmid 1, complete sequence Length = 360405 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 gaggcgctgcgcaaggcggtgggc 240 |||||| ||||||||||||||||| Sbjct: 232928 gaggcggtgcgcaaggcggtgggc 232951
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 cgccgccggcgatggcggca 117 |||||||||||||||||||| Sbjct: 2719605 cgccgccggcgatggcggca 2719586
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 312 ccgcgtcgtcgagctccgcctccccggc 339 ||||||||||||||||||| ||| |||| Sbjct: 239397 ccgcgtcgtcgagctccgcgtccacggc 239424
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cgcaggcgctggaggcgctg 225 |||||||||||||||||||| Sbjct: 260496 cgcaggcgctggaggcgctg 260477
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 acggccgcgtcgtcgagctc 327 |||||||||||||||||||| Sbjct: 2222365 acggccgcgtcgtcgagctc 2222346
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggcgctggaggcgctgcgc 228 |||||||||||||||||||| Sbjct: 43655 aggcgctggaggcgctgcgc 43636
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gaggcgctgcgcaaggcggt 236 |||||||||||||||||||| Sbjct: 161093 gaggcgctgcgcaaggcggt 161112
>gb|AC008733.9| Homo sapiens chromosome 19 clone CTD-2525J15, complete sequence Length = 189486 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccgcccgccttcctccta 92 |||||||||||||||||||| Sbjct: 31014 cgccgcccgccttcctccta 30995
>ref|NM_001037686.1| Danio rerio netrin 4 (ntn4), mRNA Length = 2191 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gtgtgtgtttttcttctcct 27 |||||||||||||||||||| Sbjct: 344 gtgtgtgtttttcttctcct 363
>gb|AC009194.9| Homo sapiens, clone RP11-44B13, complete sequence Length = 179203 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cgccgcccgccttcctccta 92 |||||||||||||||||||| Sbjct: 177558 cgccgcccgccttcctccta 177577
>gb|BT024674.1| Arabidopsis thaliana unknown protein (At3g25855) mRNA, complete cds Length = 339 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcttctcctccatggccat 37 |||||||||||||||||||| Sbjct: 255 ttcttctcctccatggccat 236
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ccgcgtcgtcgagctccgcc 331 |||||||||||||||||||| Sbjct: 4554687 ccgcgtcgtcgagctccgcc 4554668
>gb|AF413081.1|AF413081 Oryza sativa 5-enolpyruvylshikimate 3-phosphate synthase gene, complete cds Length = 3661 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctccacgccgccggcgatggcggc 116 ||||||||||||||| |||||||| Sbjct: 342 ctccacgccgccggcaatggcggc 365
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 cgtcgtcgagctccgcctccccgg 338 |||||||| ||||||||||||||| Sbjct: 639915 cgtcgtcgtgctccgcctccccgg 639938
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 tcggcaacctcaccgcgctc 393 |||||||||||||||||||| Sbjct: 18321636 tcggcaacctcaccgcgctc 18321655 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cgcgtcggtgctcccggcgtacct 182 |||| ||||||||||||||||||| Sbjct: 16567837 cgcggcggtgctcccggcgtacct 16567860
>emb|BX825826.1|CNS0A6GK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZD04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 511 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcttctcctccatggccat 37 |||||||||||||||||||| Sbjct: 245 ttcttctcctccatggccat 226
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ctcgccgcccgccttcctcc 90 |||||||||||||||||||| Sbjct: 46209 ctcgccgcccgccttcctcc 46190
>gb|AY087131.1| Arabidopsis thaliana clone 32066 mRNA, complete sequence Length = 554 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcttctcctccatggccat 37 |||||||||||||||||||| Sbjct: 283 ttcttctcctccatggccat 264
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 tcggcaacctcaccgcgctc 393 |||||||||||||||||||| Sbjct: 36372 tcggcaacctcaccgcgctc 36391
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctccacgccgccggcgatggcggc 116 ||||||||||||||| |||||||| Sbjct: 15720 ctccacgccgccggcaatggcggc 15743
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctccacgccgccggcgatggcggc 116 ||||||||||||||| |||||||| Sbjct: 140391 ctccacgccgccggcaatggcggc 140414
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tcggcaacctcaccgcgctc 393 |||||||||||||||||||| Sbjct: 101174 tcggcaacctcaccgcgctc 101155
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cgcgtcggtgctcccggcgtacct 182 |||| ||||||||||||||||||| Sbjct: 100062 cgcggcggtgctcccggcgtacct 100085
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 415 aacgcgctcacgggccccatccccgacg 442 ||||| ||||| |||||||||||||||| Sbjct: 89340 aacgccctcaccggccccatccccgacg 89313
>dbj|AB023041.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPE11 Length = 83650 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ttcttctcctccatggccat 37 |||||||||||||||||||| Sbjct: 621 ttcttctcctccatggccat 640
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 309 cggccgcgtcgtcgagctccgcctccccggcgccgggctc 348 ||||| ||||| |||||| ||||||||||||| |||||| Sbjct: 97454 cggccacgtcgcggagctcagcctccccggcgcagggctc 97415
>dbj|AK110348.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-G12, full insert sequence Length = 929 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 tcggcaacctcaccgcgctc 393 |||||||||||||||||||| Sbjct: 592 tcggcaacctcaccgcgctc 611
>dbj|AK101172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028O18, full insert sequence Length = 1857 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 415 aacgcgctcacgggccccatccccgacg 442 ||||| ||||| |||||||||||||||| Sbjct: 560 aacgccctcaccggccccatccccgacg 587
>dbj|AK073859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073L16, full insert sequence Length = 3094 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ctcgccgcccgccttcctcc 90 |||||||||||||||||||| Sbjct: 492 ctcgccgcccgccttcctcc 511
>ref|NM_208917.1| Eremothecium gossypii ACR162Cp (ACR162C), mRNA Length = 2583 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 cgtcgtcgagctccgcctccccgg 338 |||||||| ||||||||||||||| Sbjct: 310 cgtcgtcgtgctccgcctccccgg 287
>ref|NM_001039034.1| Rattus norvegicus WD repeat domain 5 (Wdr5), mRNA Length = 3140 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 tttcttctcctccatggccatggc 40 ||||||||||||| |||||||||| Sbjct: 385 tttcttctcctccgtggccatggc 362
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 gccgcgtcgtcgagctccgc 330 |||||||||||||||||||| Sbjct: 2989125 gccgcgtcgtcgagctccgc 2989144
>gb|AY048670.1| Streptomyces globisporus enediyne antitumor antibiotic C-1027 biosynthetic gene cluster, complete sequence Length = 85163 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgctggaggcgctgcgcaag 231 |||||||||||||||||||| Sbjct: 61737 cgctggaggcgctgcgcaag 61756
>gb|AY928519.1| Danio rerio netrin 4 precursor, mRNA, complete cds Length = 2191 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gtgtgtgtttttcttctcct 27 |||||||||||||||||||| Sbjct: 344 gtgtgtgtttttcttctcct 363
>dbj|AB022764.1| Hordeum vulgare mRNA for D-protein, complete cds Length = 1292 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 cgtcgtcgagctccgcctccccgg 338 |||||||||||||||| ||||||| Sbjct: 665 cgtcgtcgagctccgcgtccccgg 642
>dbj|AB052962.1| Oryza sativa EPSPs, rps20 genes for 3-phosphoshikimate 1-carboxyvinyltransferase, 40S ribosomal protein S20, complete cds Length = 10601 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctccacgccgccggcgatggcggc 116 ||||||||||||||| |||||||| Sbjct: 3341 ctccacgccgccggcaatggcggc 3364 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,572,844 Number of Sequences: 3902068 Number of extensions: 3572844 Number of successful extensions: 94012 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88610 Number of HSP's gapped (non-prelim): 5402 length of query: 453 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 431 effective length of database: 17,147,199,772 effective search space: 7390443101732 effective search space used: 7390443101732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
