ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet38f11 |
|---|---|
| Clone Library Name | barley_pub |
>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC| 2.3.1.-) (DBTNBT) Length = 441 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/45 (48%), Positives = 28/45 (62%) Frame = +1 Query: 235 IREALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAE 369 IREAL K L +++PLAGR+ E G + CT DG F EA+ E Sbjct: 65 IREALSKVLVYYFPLAGRL-RSKEIGELEVECTGDGALFVEAMVE 108
>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 41.6 bits (96), Expect = 8e-04 Identities = 22/48 (45%), Positives = 29/48 (60%) Frame = +1 Query: 235 IREALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSL 378 IREAL K L ++ P AGR+ E E G + CT +G F EA+A+ L Sbjct: 66 IREALAKILVYYPPFAGRLRET-ENGDLEVECTGEGAMFLEAMADNEL 112
>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 41.6 bits (96), Expect = 8e-04 Identities = 22/48 (45%), Positives = 29/48 (60%) Frame = +1 Query: 235 IREALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSL 378 IREAL K L ++ P AGR+ E E G + CT +G F EA+A+ L Sbjct: 66 IREALAKILVYYPPFAGRLRET-ENGDLEVECTGEGAMFLEAMADNEL 112
>DBBT_TAXCU (Q9FPW3) 2-alpha-hydroxytaxane 2-O-benzoyltransferase (EC| 2.3.1.166) (TBT) (2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase) (DBBT) Length = 440 Score = 41.6 bits (96), Expect = 8e-04 Identities = 21/48 (43%), Positives = 28/48 (58%) Frame = +1 Query: 235 IREALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSL 378 IREAL K L ++ P AGR+ E G + CT +G F EA+A+ L Sbjct: 60 IREALSKVLVYYPPFAGRL-RNTENGDLEVECTGEGAVFVEAMADNDL 106
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 38.1 bits (87), Expect(2) = 0.001 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = +1 Query: 241 EALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSLED 384 EAL KAL FYP+AGR+ ++ I C A+G F EA + LED Sbjct: 69 EALSKALVPFYPMAGRLKINGDR--YEIDCNAEGALFVEAESSHVLED 114 Score = 22.3 bits (46), Expect(2) = 0.001 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVD---RYP-THRGLV 187 V+PA ETP+ +L L+ +D R P +H G V Sbjct: 11 VRPAEETPNKSLWLSNIDMILRTPYSHTGAV 41
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 37.0 bits (84), Expect(2) = 0.002 Identities = 21/48 (43%), Positives = 28/48 (58%) Frame = +1 Query: 241 EALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSLED 384 EAL KAL +YP+AGR+ ++ I C A+G F EA + LED Sbjct: 69 EALSKALVPYYPMAGRLKINGDR--YEIDCNAEGALFVEAESSHVLED 114 Score = 22.7 bits (47), Expect(2) = 0.002 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVD---RYP-THRGLV 187 V+PA ETP+ +L L+ +D R P +H G V Sbjct: 11 VRPAEETPNKSLWLSKIDMILRTPYSHTGAV 41
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 35.4 bits (80), Expect(2) = 0.005 Identities = 20/48 (41%), Positives = 27/48 (56%) Frame = +1 Query: 241 EALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSLED 384 EAL KAL +YP+AGR+ ++ I C +G F EA + LED Sbjct: 69 EALSKALVPYYPMAGRLKINGDR--YEIDCNGEGALFVEAESSHVLED 114 Score = 22.7 bits (47), Expect(2) = 0.005 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVD---RYP-THRGLV 187 V+PA ETP+ +L L+ +D R P +H G V Sbjct: 11 VRPAEETPNKSLWLSKIDMILRTPYSHTGAV 41
>GCM1_MOUSE (P70348) Chorion-specific transcription factor GCMa (Glial cells| missing homolog 1) (GCM motif protein 1) (mGCMa) (mGCM1) Length = 436 Score = 29.3 bits (64), Expect = 4.1 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = +2 Query: 5 PRPKTPTRTIANTRLKEAAMASSSFKVTRISEGAVK--PASETPDHTLPLAW 154 PRP+T A +K+ MAS+S + A K PA +LPL W Sbjct: 155 PRPETKLEAEARRAMKKVHMASASNSLRMKGRPAAKALPAEIPSQGSLPLTW 206
>NMD3B_MOUSE (Q91ZU9) Glutamate [NMDA] receptor subunit 3B precursor| (N-methyl-D-aspartate receptor subunit NR3B) (NR3B) (NMDAR3B) (NMDA receptor NR4) (Nr4) Length = 1003 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 1 RASSQDSHAHNRKHTPQRSGHGVVELQGD 87 +AS + HAH R+H+ + HGV L D Sbjct: 707 KASFPEMHAHMRRHSAPTTPHGVAMLTSD 735
>NMD3B_RAT (Q8VHN2) Glutamate [NMDA] receptor subunit 3B precursor| (N-methyl-D-aspartate receptor subtype 3B) (NR3B) (NMDAR3B) Length = 1002 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 1 RASSQDSHAHNRKHTPQRSGHGVVELQGD 87 +AS + HAH R+H+ + HGV L D Sbjct: 707 KASFPEMHAHMRRHSAPTTPHGVAMLTSD 735
>MTFA_VIBVY (Q7MN36) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 359 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = -3 Query: 222 ASAPDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGFTAPSEIRVTLKLDDAMAASLRR 43 A P +C ++ + GY +H + + G+ F A + R TLKL++A + R Sbjct: 141 AKKPVFHLCFVASGHCFAGYSYSHNNSRFFMGIPRLKFPADAPSRSTLKLEEAFHVFIPR 200
>MTFA_VIBVU (Q8DFB2) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 359 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = -3 Query: 222 ASAPDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGFTAPSEIRVTLKLDDAMAASLRR 43 A P +C ++ + GY +H + + G+ F A + R TLKL++A + R Sbjct: 141 AKKPVFHLCFVASGHCFAGYSYSHNNSRFFMGIPRLKFPADAPSRSTLKLEEAFHVFIPR 200
>AROA_AERSA (Q03321) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 28.1 bits (61), Expect = 9.2 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = +2 Query: 17 TPTRTIANTRLKEA----AMASSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHR 178 T R I N R+KE AMA+ K+ EG + + TP L A +D Y HR Sbjct: 329 TSIRNIYNWRVKETDRLHAMATDVRKLGVSEEGDLHYITVTPPTQLKHAEIDTYKHHR 386
>HID_DROME (Q24106) Cell death protein W (Protein head involution defective)| (Protein wrinkled) Length = 410 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/45 (26%), Positives = 28/45 (62%) Frame = +2 Query: 5 PRPKTPTRTIANTRLKEAAMASSSFKVTRISEGAVKPASETPDHT 139 P P + + +++++ + A+ +S+S + S+GA AS++P+ T Sbjct: 32 PLPSSASSSVSSSGVSSASASSASSSSSASSDGASSAASQSPNTT 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,719,319 Number of Sequences: 219361 Number of extensions: 560027 Number of successful extensions: 2387 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2338 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2381 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
