| Clone Name | baet38c03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin Length = 1884 Score = 821 bits (414), Expect = 0.0 Identities = 417/418 (99%) Strand = Plus / Plus Query: 1 atctatccttactcttttccagccacttaacacttggctaggctagctctcctcctctgc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 887 atctatccttactcttttccagccacttaacacttggctaggctagctctcctcctctgc 946 Query: 61 attacgtagcaagcagccatggccgccctctcctctgcagccgtgtccgtcccttccttc 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 agtacgtagcaagcagccatggccgccctctcctctgcagccgtgtccgtcccttccttc 1006 Query: 121 gccgccgccacccccatgcgcagcagcagaagcagcaggatggttgtgcgcgcttccctg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 gccgccgccacccccatgcgcagcagcagaagcagcaggatggttgtgcgcgcttccctg 1066 Query: 181 ggcaagaaggccgccagcgcggccgtggccatggccgccggcgccatgctgctgggcggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1067 ggcaagaaggccgccagcgcggccgtggccatggccgccggcgccatgctgctgggcggg 1126 Query: 241 tccgcgatggcacaggacgtgctcctgggtgccaacggcggcgtgctggtgttcgagccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1127 tccgcgatggcacaggacgtgctcctgggtgccaacggcggcgtgctggtgttcgagccc 1186 Query: 301 aacgacttcagcgtcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1187 aacgacttcagcgtcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccg 1246 Query: 361 cacaacgtggtgttcgacgaggacgccgtgccctccggcgtcgacgtctccaagatct 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1247 cacaacgtggtgttcgacgaggacgccgtgccctccggcgtcgacgtctccaagatct 1304
>emb|Y00704.1|HVPCR Barley mRNA for plastocyanin precursor Length = 662 Score = 765 bits (386), Expect = 0.0 Identities = 389/390 (99%) Strand = Plus / Plus Query: 29 aacacttggctaggctagctctcctcctctgcattacgtagcaagcagccatggccgccc 88 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 aacacttggctaggctagctctcctcctctgcagtacgtagcaagcagccatggccgccc 60 Query: 89 tctcctctgcagccgtgtccgtcccttccttcgccgccgccacccccatgcgcagcagca 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tctcctctgcagccgtgtccgtcccttccttcgccgccgccacccccatgcgcagcagca 120 Query: 149 gaagcagcaggatggttgtgcgcgcttccctgggcaagaaggccgccagcgcggccgtgg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gaagcagcaggatggttgtgcgcgcttccctgggcaagaaggccgccagcgcggccgtgg 180 Query: 209 ccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgg 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgg 240 Query: 269 gtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgaga 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgaga 300 Query: 329 ccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccg 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccg 360 Query: 389 tgccctccggcgtcgacgtctccaagatct 418 |||||||||||||||||||||||||||||| Sbjct: 361 tgccctccggcgtcgacgtctccaagatct 390
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 194 bits (98), Expect = 2e-46 Identities = 184/212 (86%), Gaps = 3/212 (1%) Strand = Plus / Minus Query: 205 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 264 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 148996 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 148940 Query: 265 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 324 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 148939 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 148880 Query: 325 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 384 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 148879 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 148820 Query: 385 gccgtgccctccggcgtcgacgtctccaagat 416 || || || |||||||||||| |||||||| Sbjct: 148819 gcggttccgagcggcgtcgacgtgtccaagat 148788
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 194 bits (98), Expect = 2e-46 Identities = 184/212 (86%), Gaps = 3/212 (1%) Strand = Plus / Minus Query: 205 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 264 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 13892 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 13836 Query: 265 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 324 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 13835 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 13776 Query: 325 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 384 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 13775 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 13716 Query: 385 gccgtgccctccggcgtcgacgtctccaagat 416 || || || |||||||||||| |||||||| Sbjct: 13715 gcggttccgagcggcgtcgacgtgtccaagat 13684
>dbj|AK070447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C22, full insert sequence Length = 703 Score = 194 bits (98), Expect = 2e-46 Identities = 184/212 (86%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 205 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 264 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 193 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 249 Query: 265 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 324 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 250 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 309 Query: 325 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 384 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 310 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 369 Query: 385 gccgtgccctccggcgtcgacgtctccaagat 416 || || || |||||||||||| |||||||| Sbjct: 370 gcggttccgagcggcgtcgacgtgtccaagat 401
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 194 bits (98), Expect = 2e-46 Identities = 184/212 (86%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 205 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 264 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 71546 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 71602 Query: 265 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 324 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 71603 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 71662 Query: 325 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 384 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 71663 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 71722 Query: 385 gccgtgccctccggcgtcgacgtctccaagat 416 || || || |||||||||||| |||||||| Sbjct: 71723 gcggttccgagcggcgtcgacgtgtccaagat 71754
>gb|AF093636.1|AF093636 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 676 Score = 194 bits (98), Expect = 2e-46 Identities = 184/212 (86%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 205 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 264 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 175 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 231 Query: 265 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 324 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 232 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 291 Query: 325 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 384 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 292 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 351 Query: 385 gccgtgccctccggcgtcgacgtctccaagat 416 || || || |||||||||||| |||||||| Sbjct: 352 gcggttccgagcggcgtcgacgtgtccaagat 383
>gb|AF009412.1|AF009412 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 745 Score = 174 bits (88), Expect = 1e-40 Identities = 159/182 (87%), Gaps = 3/182 (1%) Strand = Plus / Plus Query: 205 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 264 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 187 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 243 Query: 265 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 324 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 244 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 303 Query: 325 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 384 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||| ||||| Sbjct: 304 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacaaggac 363 Query: 385 gc 386 || Sbjct: 364 gc 365
>gb|AY104253.1| Zea mays PCO133617 mRNA sequence Length = 1001 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 279 cggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagaccatcacctt 338 ||||| ||| || |||||||||| | | |||| ||||||||||||||| |||||||| || Sbjct: 462 cggcgggctcgtcttcgagcccagccagttcaccgtcaaggccggcgacaccatcacatt 521 Query: 339 caagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgccctccgg 398 ||||||||||||||| | |||||||||||| || |||||||| |||| ||||| ||| Sbjct: 522 caagaacaacgccggcttcccgcacaacgtcgtcttcgacgaagacgaggtgccgagcgg 581 Query: 399 cgtcgacgtctccaagatct 418 |||||||| | ||||||||| Sbjct: 582 cgtcgacgccaccaagatct 601
>dbj|AB252146.1| Triticum aestivum Tamyb3 mRNA for myb-related protein, partial cds Length = 825 Score = 99.6 bits (50), Expect = 7e-18 Identities = 60/62 (96%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 67 tagcaagcagccatggccgccctctcctctgcag-ccgtgtccgtcccttccttcgccgc 125 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133 tagctagcagccatggccgccctctcctctgcagcccgtgtccgtcccttccttcgccgc 74 Query: 126 cg 127 || Sbjct: 73 cg 72 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Minus Query: 151 agcagcaggatggttgtgcgcgcttccctgg 181 |||||||||||||| |||||||| ||||||| Sbjct: 47 agcagcaggatggtggtgcgcgcgtccctgg 17
>gb|AF031545.1|AF031545 Fritillaria agrestis plastocyanin (ploc) mRNA, complete cds Length = 720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 337 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 383 ||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 320 ttcaagaacaacgccgggttcccgcacaatgtgttgttcgatgagga 366
>ref|NM_106259.2| Arabidopsis thaliana copper ion binding / electron transporter AT1G76100 mRNA, complete cds Length = 771 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 337 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 385 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 326 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 374
>gb|BT025525.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 516 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 337 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 385 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 301 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 349
>emb|Z83321.1|ATZ83321 A.thaliana 16 kb chromosome 1 DNA fragment Length = 16202 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 337 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 385 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 8687 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 8735
>gb|BT021977.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 746 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 337 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 385 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 337 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 385
>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I, complete sequence Length = 97554 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 337 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 385 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 10610 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 10562
>emb|X02965.1|SPPCYA Silene pratensis mRNA for plastocyanin precursor Length = 773 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 331 atcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 383 |||||||||||||||||||| |||| ||| ||||| || || ||||||||||| Sbjct: 350 atcaccttcaagaacaacgctgggttcccacacaatgtcgtcttcgacgagga 402
>gb|M20937.1|ATHPCG A.thaliana plastocyanin gene, complete cds Length = 1447 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 337 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 385 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 957 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 1005
>emb|X04693.1|SOPCG Spinach gene for plastocyanin Length = 1000 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Plus Query: 337 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgccctcc 396 ||||||||||| ||||| | ||| |||||||| ||||| |||||||||| | |||||| Sbjct: 542 ttcaagaacaatgccggattcccccacaacgtagtgtttgacgaggacgagattccctcc 601 Query: 397 ggcgtcgacg 406 || ||||||| Sbjct: 602 ggtgtcgacg 611
>gb|DQ226793.1| Boechera divaricarpa isolate SLW-B-C02 mRNA sequence Length = 701 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 337 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 385 ||||||||||| || |||| ||| |||||||| |||||||| ||||||| Sbjct: 343 ttcaagaacaatgctgggttcccacacaacgttgtgttcgatgaggacg 391
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 192 cgccagcgcggccgtggccatggccgcc 219 |||||||||||| ||||||||||||||| Sbjct: 3177030 cgccagcgcggcggtggccatggccgcc 3177057
>gb|J05524.1|CREAPCYN C.reinhardtii apoplastocyanin (PC6-2) mRNA, complete cds Length = 577 Score = 48.1 bits (24), Expect = 0.023 Identities = 72/88 (81%) Strand = Plus / Plus Query: 314 tcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgt 373 ||||| ||||||||||| | | |||| ||||||||| || | ||| |||||| | || | Sbjct: 227 tcaagtccggcgagaccgtgaacttcgtgaacaacgctggcttcccccacaacatcgtct 286 Query: 374 tcgacgaggacgccgtgccctccggcgt 401 |||||||||| ||| | ||||||||||| Sbjct: 287 tcgacgaggatgccatcccctccggcgt 314
>gb|DQ213132.1| Taeniopygia guttata clone 0058P0029F06 KIAA0878-like mRNA, complete sequence Length = 757 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcaggat 161 ||||||||||||||||||||||| Sbjct: 141 cgcagcagcagaagcagcaggat 119
>emb|Z50186.1|PNPCBMR P.nigra mRNA for plastocyanin b Length = 699 Score = 46.1 bits (23), Expect = 0.091 Identities = 44/51 (86%) Strand = Plus / Plus Query: 336 cttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgc 386 |||||||||||| ||||||| ||| || ||||| | |||||||||||||| Sbjct: 322 cttcaagaacaatgccgggttcccacataacgttctcttcgacgaggacgc 372
>ref|XM_510225.1| PREDICTED: Pan troglodytes similar to Tm9sf1 protein (LOC453233), mRNA Length = 1542 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1008 cagaagcagcaggatggttgtg 987
>ref|NM_001014842.1| Homo sapiens transmembrane 9 superfamily member 1 (TM9SF1), transcript variant 2, mRNA Length = 2124 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1596 cagaagcagcaggatggttgtg 1575
>ref|NM_006405.5| Homo sapiens transmembrane 9 superfamily member 1 (TM9SF1), transcript variant 1, mRNA Length = 2449 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1596 cagaagcagcaggatggttgtg 1575
>emb|CR859801.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1634 (from clone DKFZp469F1634) Length = 2227 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1370 cagaagcagcaggatggttgtg 1349
>emb|BX161390.1|CNSLT1I7O human full-length cDNA clone CS0DC007YI17 of Neuroblastoma of Homo sapiens (human) Length = 2354 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1576 cagaagcagcaggatggttgtg 1555
>gb|BC010856.2| Homo sapiens transmembrane 9 superfamily member 1, transcript variant 1, mRNA (cDNA clone MGC:9160 IMAGE:3899246), complete cds Length = 2121 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1265 cagaagcagcaggatggttgtg 1244
>gb|DQ122875.1| Chlamydomonas incerta chloroplast plastocyanin (petE) mRNA, complete cds; nuclear gene for chloroplast product Length = 620 Score = 44.1 bits (22), Expect = 0.36 Identities = 73/90 (81%) Strand = Plus / Plus Query: 312 cgtcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggt 371 ||||||| ||||||||||||| | |||| ||||||||| || | ||| |||||| | || Sbjct: 246 cgtcaagtccggcgagaccattaacttcgtgaacaacgctggcttcccccacaacatcgt 305 Query: 372 gttcgacgaggacgccgtgccctccggcgt 401 ||||| ||||| ||| | ||||| ||||| Sbjct: 306 cttcgatgaggatgccatcccctcgggcgt 335
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 gccggcgccatgctgctgggcg 238 |||||||||||||||||||||| Sbjct: 4921238 gccggcgccatgctgctgggcg 4921217
>gb|AC119572.26| Ustilago hordei strain 4875-4 clone uhobac-5d9, complete sequence Length = 152059 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 ccggcgagaccatcaccttcaa 341 |||||||||||||||||||||| Sbjct: 108213 ccggcgagaccatcaccttcaa 108234
>emb|CR621520.1| full-length cDNA clone CS0DI012YJ08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1903 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1386 cagaagcagcaggatggttgtg 1365
>emb|CR618221.1| full-length cDNA clone CS0DC014YA08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2107 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1311 cagaagcagcaggatggttgtg 1290
>emb|CR614922.1| full-length cDNA clone CS0DI016YC09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1806 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1021 cagaagcagcaggatggttgtg 1000
>emb|CR606704.1| full-length cDNA clone CS0DI067YH19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2167 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1367 cagaagcagcaggatggttgtg 1346
>emb|CR604869.1| full-length cDNA clone CS0DA001YH23 of Neuroblastoma of Homo sapiens (human) Length = 2136 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1310 cagaagcagcaggatggttgtg 1289
>gb|AE012090.1| Xanthomonas axonopodis pv. citri str. 306, section 468 of 469 of the complete genome Length = 10947 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 gccggcgccatgctgctgggcg 238 |||||||||||||||||||||| Sbjct: 5924 gccggcgccatgctgctgggcg 5903
>gb|DQ207951.1| Comamonas sp. CNB-1 putative regulatory protein (cnbR), putative ferredoxin (orf1), 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit (cnbCa), 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit (cnbCb), 2-amino-5-chloromuconic semialdehyde dehydrogenase (cnbD), putative 2-keto-4-pentenoate hydratase (cnbE), putative 4-oxalocrotonate decarboxylase (cnbF), 4-oxalocrotonate tautomerase (cnbG), 2-amino-5-chloromuconate deaminase (cnbH), and putative 2-keto-4-pentenoate hydratase (cnbI) genes, complete cds Length = 10644 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 cgtggccatggccgccggcgcc 225 |||||||||||||||||||||| Sbjct: 7634 cgtggccatggccgccggcgcc 7655
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 266 tgggtgccaacggcggcgtgct 287 |||||||||||||||||||||| Sbjct: 1090565 tgggtgccaacggcggcgtgct 1090586
>dbj|AK179003.1| Mus musculus cDNA, clone:Y0G0108L13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000034311, based on BLAT search Length = 67 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcagga 160 |||||||||||||||||||||| Sbjct: 1 cgcagcagcagaagcagcagga 22
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 cgtcccttccttcgccgccgcc 129 |||||||||||||||||||||| Sbjct: 1160557 cgtcccttccttcgccgccgcc 1160578
>emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-468E2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194815 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 19476 cagaagcagcaggatggttgtg 19455
>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364 Length = 526707 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 ccggcgagaccatcaccttcaa 341 |||||||||||||||||||||| Sbjct: 478061 ccggcgagaccatcaccttcaa 478082
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 gccggcgccatgctgctgggcg 238 |||||||||||||||||||||| Sbjct: 4922474 gccggcgccatgctgctgggcg 4922453
>emb|BX161494.1|CNSLT1I7P human full-length cDNA clone CS0DJ012YD11 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 2002 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1538 cagaagcagcaggatggttgtg 1517
>gb|U94831.1|HSU94831 Homo sapiens multispanning membrane protein mRNA, complete cds Length = 2114 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgtg 168 |||||||||||||||||||||| Sbjct: 1263 cagaagcagcaggatggttgtg 1242
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 cgcggccgtggccatggccgc 218 ||||||||||||||||||||| Sbjct: 1916416 cgcggccgtggccatggccgc 1916436 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cggcggcgtgctggtgttcg 295 |||||||||||||||||||| Sbjct: 1997585 cggcggcgtgctggtgttcg 1997604
>gb|AC150492.2| Bos taurus BAC CH240-454H24 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 185197 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatggt 164 |||||||||| |||||||||||||| Sbjct: 127287 gcagcagcagcagcagcaggatggt 127263
>ref|XM_367503.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07414.4) partial mRNA Length = 2712 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggccgtggccatggccgcc 219 ||||||||||||||||||||| Sbjct: 2525 gcggccgtggccatggccgcc 2505
>ref|XM_588051.2| PREDICTED: Bos taurus similar to NPC1 (Niemann-Pick disease, type C1, gene)-like 1 (LOC539550), mRNA Length = 4002 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 3828 gcagcagcagaagcagcagga 3848
>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence Length = 178774 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 116498 gcagcagcagaagcagcagga 116478
>gb|AY190956.1| Drosophila virilis clone DVIF01_06_H02 (D1438) genomic sequence Length = 46427 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 2437 gcagcagcagaagcagcagga 2417
>ref|XR_002749.1| PREDICTED: Mus musculus similar to THO complex subunit 4 (Tho4) (RNA and export factor binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) (LOC670007), mRNA Length = 2938 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 2398 gcagcagcagaagcagcagga 2418 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 2155 gcagcagcagaagcagcagga 2175
>gb|AC074257.5| Homo sapiens BAC clone RP11-796I2 from 7, complete sequence Length = 186047 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 aggctagctctcctcctctgc 60 ||||||||||||||||||||| Sbjct: 148698 aggctagctctcctcctctgc 148678
>gb|AC122384.3| Mus musculus BAC clone RP24-63P8 from chromosome 17, complete sequence Length = 190880 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 10295 gcagcagcagaagcagcagga 10275
>emb|CR722792.2|CNS0GKNI Tetraodon nigroviridis full-length cDNA Length = 1143 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 741 gcagcagcagaagcagcagga 761
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 agaccatcaccttcaagaaca 346 ||||||||||||||||||||| Sbjct: 1887121 agaccatcaccttcaagaaca 1887141 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 gaaggccgccagcgcggccg 205 |||||||||||||||||||| Sbjct: 4793247 gaaggccgccagcgcggccg 4793228
>emb|AL158210.12| Human DNA sequence from clone RP11-554I8 on chromosome 10 Contains two novel genes, complete sequence Length = 134826 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 116585 gcagcagcagaagcagcagga 116605
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 321 cggcgagaccatcaccttcaagaac 345 |||| |||||||||||||||||||| Sbjct: 246840 cggcaagaccatcaccttcaagaac 246816
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 tggtgttcgacgaggacgccg 388 ||||||||||||||||||||| Sbjct: 9760 tggtgttcgacgaggacgccg 9780
>gb|AC164627.4| Mus musculus 10 BAC RP23-382A18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192275 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 13606 gcagcagcagaagcagcagga 13626 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 13363 gcagcagcagaagcagcagga 13383
>dbj|AK074734.1| Homo sapiens cDNA FLJ90253 fis, clone NT2RM4000284, highly similar to Human IgG Fc receptor hFcRn mRNA Length = 2674 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcaggatgg 163 ||||||||||| ||||||||||||| Sbjct: 1854 cgcagcagcagcagcagcaggatgg 1830
>dbj|AB223673.1| Aspergillus oryzae cDNA, contig sequence: AoEST0513 Length = 679 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 ccaacgacttcagcgtcaaggccgg 323 |||||||||||| |||||||||||| Sbjct: 209 ccaacgacttcaccgtcaaggccgg 233
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ccaacgacttcagcgtcaaggccgg 323 |||||||||||| |||||||||||| Sbjct: 1916264 ccaacgacttcaccgtcaaggccgg 1916240
>gb|AC010626.6| Homo sapiens chromosome 5 clone CTD-2138K21, complete sequence Length = 160312 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 cagcagcagaagcagcaggat 161 ||||||||||||||||||||| Sbjct: 5651 cagcagcagaagcagcaggat 5671
>gb|AC091990.2| Homo sapiens chromosome 5 clone RP11-82D20, complete sequence Length = 177470 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 cagcagcagaagcagcaggat 161 ||||||||||||||||||||| Sbjct: 47516 cagcagcagaagcagcaggat 47496
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 cgtcaaggccggcgagaccat 332 ||||||||||||||||||||| Sbjct: 1713828 cgtcaaggccggcgagaccat 1713808
>gb|AC012629.9| Homo sapiens chromosome 5 clone CTD-2154B17, complete sequence Length = 171603 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 cagcagcagaagcagcaggat 161 ||||||||||||||||||||| Sbjct: 12898 cagcagcagaagcagcaggat 12878
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 206 tggccatggccgccggcgccatgctgctgggcg 238 ||||| ||||||||| |||| |||||||||||| Sbjct: 1408585 tggccctggccgccgacgccgtgctgctgggcg 1408617
>gb|AC008349.2|AC008349 Drosophila melanogaster, chromosome 2R, region 58E-58E, BAC clone BACR01E01, complete sequence Length = 173373 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 56194 gcagcagcagaagcagcagga 56174
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 201 ggccgtggccatggccgccggcgcc 225 |||||||||||||||||||| |||| Sbjct: 41984392 ggccgtggccatggccgccgccgcc 41984416
>gb|AY235187.1| Meleagris gallopavo clone MNT-222 microsatellite sequence Length = 741 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcaggatggt 164 |||||||||| |||||||||||||| Sbjct: 524 gcagcagcagcagcagcaggatggt 548
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 201 ggccgtggccatggccgccggcgcc 225 |||||||||||||||||||| |||| Sbjct: 86469 ggccgtggccatggccgccgccgcc 86493
>ref|XM_574076.1| PREDICTED: Rattus norvegicus similar to urocortin III (LOC498791), mRNA Length = 720 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 265 gcagcagcagaagcagcagga 245
>ref|XM_573777.1| PREDICTED: Rattus norvegicus transmembrane 9 superfamily member 1 (predicted) (Tm9sf1_predicted), mRNA Length = 2465 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgt 167 ||||||||||||||||||||| Sbjct: 1618 cagaagcagcaggatggttgt 1598
>gb|AF260581.1|AF260581 Amycolatopsis mediterranei plasmid pHGF8002 tripeptidyl aminopeptidase gene, partial cds; 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase gene, complete cds; and 2,5 dichloro-2,5 cyclohexadiene-1,4 diol dehydrogenase gene, partial cds Length = 2049 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 gacgccgtgccctccggcgtcgacg 406 |||||||||||| |||||||||||| Sbjct: 182 gacgccgtgcccgccggcgtcgacg 158
>ref|XM_308922.2| Anopheles gambiae str. PEST ENSANGP00000012810 (ENSANGG00000010321), partial mRNA Length = 2103 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 1152 gcagcagcagaagcagcagga 1172
>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the complete sequence Length = 307324 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 214138 gcagcagcagaagcagcagga 214118
>gb|BC081891.1| Rattus norvegicus transmembrane 9 superfamily member 1, mRNA (cDNA clone MGC:93788 IMAGE:7109579), complete cds Length = 2441 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgt 167 ||||||||||||||||||||| Sbjct: 1618 cagaagcagcaggatggttgt 1598
>ref|NM_001012155.1| Rattus norvegicus transmembrane 9 superfamily member 1 (Tm9sf1), mRNA Length = 2441 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 cagaagcagcaggatggttgt 167 ||||||||||||||||||||| Sbjct: 1618 cagaagcagcaggatggttgt 1598
>emb|CT010565.14| Mouse DNA sequence from clone RP23-263E11 on chromosome 16, complete sequence Length = 200242 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 53788 gcagcagcagaagcagcagga 53768
>dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:LjT35I07, TM0121b, complete sequence Length = 56086 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 331 atcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 383 ||||| ||||||||||| || || | ||| |||||||| || ||||||||||| Sbjct: 47310 atcacgttcaagaacaatgctggtttccctcacaacgttgtcttcgacgagga 47362
>gb|AC164629.14| Mus musculus 10 BAC RP23-16N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221874 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 85822 gcagcagcagaagcagcagga 85802 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagga 160 ||||||||||||||||||||| Sbjct: 85579 gcagcagcagaagcagcagga 85559
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 catgcgcagcagcagaagcagcag 158 ||||||||||||||| |||||||| Sbjct: 70230 catgcgcagcagcagcagcagcag 70253
>ref|XM_512289.1| PREDICTED: Pan troglodytes similar to semaphorin 6B isoform 1 precursor; semaphorin Z; semaphorin VIB (LOC455607), mRNA Length = 2444 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 586 gcagcagcagaagcagcagg 567
>ref|XM_483748.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1139 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggccatggccgccggcgcca 226 |||||||||||||||||||| Sbjct: 118 ggccatggccgccggcgcca 99
>ref|XM_467761.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tccgtcccttccttcgccgccgcc 129 |||| ||||||||||||||||||| Sbjct: 167 tccgccccttccttcgccgccgcc 144
>ref|XM_469441.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2195 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 281 gcagcagcagaagcagcagg 300
>ref|XM_479160.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1666 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 166 gcagcagcagaagcagcagg 185
>ref|NM_032108.2| Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (SEMA6B), transcript variant SEMA6B.3, mRNA Length = 3805 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 93 gcagcagcagaagcagcagg 74
>ref|NM_020241.2| Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (SEMA6B), transcript variant SEMA6B.1, mRNA Length = 2005 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 93 gcagcagcagaagcagcagg 74
>ref|NM_133327.1| Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (SEMA6B), transcript variant SEMA6B.2, mRNA Length = 2500 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 93 gcagcagcagaagcagcagg 74
>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence Length = 197906 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 30296 cgcagcagcagaagcagcag 30315
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 catgcgcagcagcagaagcagcag 158 ||||||||||||||| |||||||| Sbjct: 1722322 catgcgcagcagcagcagcagcag 1722345
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 caacggcggcgtgctggtgt 292 |||||||||||||||||||| Sbjct: 1000597 caacggcggcgtgctggtgt 1000616
>gb|AY548484.1| Frog virus 3, complete genome Length = 105903 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccatggccgccctctcctc 95 |||||||||||||||||||| Sbjct: 48564 gccatggccgccctctcctc 48545
>gb|AC007893.8| Drosophila melanogaster clone BACR02E15, complete sequence Length = 182430 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 atgcgcagcagcagaagcagcagg 159 ||||||| |||||||||||||||| Sbjct: 100614 atgcgcaacagcagaagcagcagg 100637
>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence Length = 170718 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 112470 cgcagcagcagaagcagcag 112451
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 gttcgacgaggacgccgtgccctc 395 |||| ||||||||||||||||||| Sbjct: 4219622 gttcaacgaggacgccgtgccctc 4219645 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gccgtggccatggccgccgg 221 |||||||||||||||||||| Sbjct: 638240 gccgtggccatggccgccgg 638221
>ref|XM_414139.1| PREDICTED: Gallus gallus similar to MGC64570 protein (LOC415777), partial mRNA Length = 3916 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 1371 gcagcagcagaagcagcagg 1390
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 cgcggccgtggccatggccgccggcgcc 225 |||||||| |||||||||||||| |||| Sbjct: 67609 cgcggccgcggccatggccgccgccgcc 67582
>gb|BC059162.1| Rattus norvegicus Unknown (protein for MGC:72996), mRNA (cDNA clone MGC:72996 IMAGE:6888425), complete cds Length = 1290 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 679 gcagcagcagaagcagcagg 660
>gb|BC019547.1| Mus musculus RIKEN cDNA 2010004O20 gene, mRNA (cDNA clone MGC:28484 IMAGE:4164765), complete cds Length = 1276 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 698 gcagcagcagaagcagcagg 679
>gb|AY050669.2| Drosophila melanogaster PKC-potentiated PP1 inhibitory protein mRNA, complete cds Length = 2344 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 228 cgcagcagcagaagcagcag 247
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 27971244 gcagcagcagaagcagcagg 27971225 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcaggatgg 163 ||||||||||||||||||| |||| Sbjct: 19055556 gcagcagcagaagcagcagaatgg 19055579
>gb|BC026747.1| Mus musculus LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), mRNA (cDNA clone MGC:25600 IMAGE:4024321), complete cds Length = 943 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 482 cgcagcagcagaagcagcag 501
>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete sequence Length = 171437 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatgg 163 ||||||||||||||||||| |||| Sbjct: 102021 gcagcagcagaagcagcagaatgg 101998
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 53782 gcagcagcagaagcagcagg 53801
>ref|XM_980131.1| PREDICTED: Mus musculus hypothetical protein LOC670239 (LOC670239), mRNA Length = 789 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 472 gcagcagcagaagcagcagg 453 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 442 gcagcagcagaagcagcagg 423 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 283 gcagcagcagaagcagcagg 264
>ref|XM_990592.1| PREDICTED: Mus musculus hypothetical protein LOC676508 (LOC676508), mRNA Length = 789 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 472 gcagcagcagaagcagcagg 453 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 442 gcagcagcagaagcagcagg 423 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 283 gcagcagcagaagcagcagg 264
>ref|XM_001002299.1| PREDICTED: Mus musculus hypothetical protein LOC668564 (LOC668564), mRNA Length = 780 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 463 gcagcagcagaagcagcagg 444 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 433 gcagcagcagaagcagcagg 414 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 274 gcagcagcagaagcagcagg 255
>gb|AY491539.1| Nicotiana tabacum voucher Et4-10 ERT10 (ERT10) mRNA, partial cds Length = 457 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 337 ttcaagaacaacgccgggtacccgcacaacgt 368 ||||||||||| ||||||| ||| |||||||| Sbjct: 246 ttcaagaacaatgccgggttcccccacaacgt 277
>ref|XM_838442.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1359) partial mRNA Length = 2451 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 catgcgcagcagcagaagcagcag 158 ||||||||||||||| |||||||| Sbjct: 100 catgcgcagcagcagcagcagcag 123
>ref|XM_855865.1| PREDICTED: Canis familiaris hypothetical protein LOC608180 (LOC608180), mRNA Length = 1041 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccttccttcgccgccgccac 131 |||||||||||||||||||| Sbjct: 662 ccttccttcgccgccgccac 681
>ref|XM_572256.1| Cryptococcus neoformans var. neoformans JEC21 Rab guanyl-nucleotide exchange factor (CNH00630) partial mRNA Length = 3246 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 caacggcggcgtgctggtgt 292 |||||||||||||||||||| Sbjct: 111 caacggcggcgtgctggtgt 130
>ref|XM_807410.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510283.80) partial mRNA Length = 1101 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 969 gcagcagcagaagcagcagg 988
>gb|BC020421.1| Homo sapiens Fc fragment of IgG, receptor, transporter, alpha, mRNA (cDNA clone IMAGE:2900361) Length = 1852 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 1659 gcagcagcagcagcagcaggatgg 1636
>ref|XM_810126.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503823.50) partial mRNA Length = 1098 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 966 gcagcagcagaagcagcagg 985
>gb|AC015909.14| Homo sapiens chromosome 17, clone RP11-893F2, complete sequence Length = 217746 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 4597 gcagcagcagcagcagcaggatgg 4620
>gb|AY150217.1| Ambystoma tigrinum stebbensi virus, complete genome Length = 106332 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccatggccgccctctcctc 95 |||||||||||||||||||| Sbjct: 79984 gccatggccgccctctcctc 79965
>gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, complete sequence Length = 199993 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 catgcgcagcagcagaagcagcag 158 |||| ||||||||||||||||||| Sbjct: 2563 catgagcagcagcagaagcagcag 2540
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 257910 cgcagcagcagaagcagcag 257929
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cctgggcaagaaggccgcca 196 |||||||||||||||||||| Sbjct: 4712080 cctgggcaagaaggccgcca 4712099
>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a novel gene and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 197634 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 agcagcagaagcagcaggat 161 |||||||||||||||||||| Sbjct: 110035 agcagcagaagcagcaggat 110016
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 caaggccggcgagaccatca 334 |||||||||||||||||||| Sbjct: 2396512 caaggccggcgagaccatca 2396531
>ref|XM_961473.1| PREDICTED: Tribolium castaneum similar to nuclear oncoprotein skia (LOC655004), mRNA Length = 1455 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tcccttccttcgccgccgcc 129 |||||||||||||||||||| Sbjct: 1337 tcccttccttcgccgccgcc 1356
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 catcaccttcaagaacaacgccgg 353 |||||||||||| ||||||||||| Sbjct: 1002222 catcaccttcaacaacaacgccgg 1002199
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 gttcgacgaggacgccgtgccctc 395 |||| ||||||||||||||||||| Sbjct: 60577 gttcaacgaggacgccgtgccctc 60600
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gccgtggccatggccgccgg 221 |||||||||||||||||||| Sbjct: 294881 gccgtggccatggccgccgg 294862
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gcggccgtggccatggccgc 218 |||||||||||||||||||| Sbjct: 382 gcggccgtggccatggccgc 363
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 agaaggccgccagcgcggcc 204 |||||||||||||||||||| Sbjct: 233726 agaaggccgccagcgcggcc 233707
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gcggccgtggccatggccgc 218 |||||||||||||||||||| Sbjct: 293652 gcggccgtggccatggccgc 293633 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 agaaggccgccagcgcggcc 204 |||||||||||||||||||| Sbjct: 177814 agaaggccgccagcgcggcc 177795
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 agaaggccgccagcgcggcc 204 |||||||||||||||||||| Sbjct: 236086 agaaggccgccagcgcggcc 236105
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggccgtggccatggccgc 218 |||||||||||||||||||| Sbjct: 76379 gcggccgtggccatggccgc 76398
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 gttcgacgaggacgccgtgccctc 395 |||| ||||||||||||||||||| Sbjct: 96604 gttcaacgaggacgccgtgccctc 96627
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gccgtggccatggccgccgg 221 |||||||||||||||||||| Sbjct: 295032 gccgtggccatggccgccgg 295013
>emb|AJ010302.1|RSP010302 Rhodobacter sphaeroides photosynthetic gene cluster Length = 40707 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cggcggcgtgctggtgttcg 295 |||||||||||||||||||| Sbjct: 23564 cggcggcgtgctggtgttcg 23545
>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete sequence Length = 160298 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 accatcaccttcaagaacaa 347 |||||||||||||||||||| Sbjct: 5651 accatcaccttcaagaacaa 5632
>gb|AC151908.8| Mus musculus BAC clone RP23-109A22 from chromosome 8, complete sequence Length = 233606 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 100912 gcagcagcagaagcagcagg 100931
>ref|NM_198781.1| Rattus norvegicus Unknown (protein for MGC:72996) (MGC72996), mRNA Length = 1290 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 679 gcagcagcagaagcagcagg 660
>gb|AY603379.1| Mus musculus hepatocyte odd protein shuttling protein (Hops) mRNA, complete cds Length = 1110 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 673 gcagcagcagaagcagcagg 654
>gb|AY603378.1| Rattus norvegicus hepatocyte odd protein shuttling protein (Hops) mRNA, complete cds Length = 1381 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 791 gcagcagcagaagcagcagg 772
>gb|DQ450368.1| Uncultured bacterium clone X16 16S ribosomal RNA gene, partial sequence Length = 361 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggtgttcgacgaggacgccg 388 |||||||||||||||||||| Sbjct: 67 ggtgttcgacgaggacgccg 86
>gb|DQ167730.1| Drosophila simulans putative Cyp28c1 protein (Cyp28c1) gene, exons 1 through 5 and partial cds Length = 1580 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 ggccgccagcgcggccgtggccatggcc 216 ||||||||| |||||| ||||||||||| Sbjct: 1562 ggccgccagtgcggccttggccatggcc 1535
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 gaaggccgccagcgcggccg 205 |||||||||||||||||||| Sbjct: 5339692 gaaggccgccagcgcggccg 5339673 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cggcgagaccatcaccttcaagaa 344 |||| ||||||||||||||||||| Sbjct: 1631008 cggcaagaccatcaccttcaagaa 1631031
>emb|CR614236.1| full-length cDNA clone CL0BB004ZB08 of Neuroblastoma of Homo sapiens (human) Length = 1888 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 1693 gcagcagcagcagcagcaggatgg 1670
>dbj|AK075510.1| Homo sapiens cDNA PSEC0208 fis, clone HEMBA1003252, highly similar to IGG RECEPTOR FCRN LARGE SUBUNIT P51 PRECURSOR Length = 1730 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 1033 gcagcagcagcagcagcaggatgg 1010
>tpg|BK003116.1| TPA: TPA_inf: Drosophila melanogaster HDC18498 (HDC18498) gene, partial cds Length = 1319 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 catgcgcagcagcagaagcagcag 158 ||||||||||||||| |||||||| Sbjct: 599 catgcgcagcagcagcagcagcag 622
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 112239 gcagcagcagcagcagcaggatgg 112216
>dbj|AK055164.1| Homo sapiens cDNA FLJ30602 fis, clone BRAWH2009558 Length = 2268 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 265 gcagcagcagcagcagcaggatgg 288
>ref|NM_164942.1| Drosophila melanogaster CG17124-RB, transcript variant B (CG17124), mRNA Length = 2282 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 227 cgcagcagcagaagcagcag 246
>ref|NM_144114.3| Drosophila melanogaster CG14494-RA (CG14494), mRNA Length = 516 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 443 cgcagcagcagaagcagcag 462
>ref|NM_143485.2| Drosophila melanogaster CG7814-RA (CG7814), mRNA Length = 3085 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 atgcgcagcagcagaagcagcagg 159 ||||||| |||||||||||||||| Sbjct: 56 atgcgcaacagcagaagcagcagg 79
>ref|NM_135606.2| Drosophila melanogaster CG17124-RA, transcript variant A (CG17124), mRNA Length = 1242 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 227 cgcagcagcagaagcagcag 246
>gb|AY095067.1| Drosophila melanogaster RE14405 full insert cDNA Length = 1258 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 227 cgcagcagcagaagcagcag 246
>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence Length = 66280 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cggcggcgtgctggtgttcg 295 |||||||||||||||||||| Sbjct: 48670 cggcggcgtgctggtgttcg 48651
>dbj|AK143470.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched library, clone:E860006K03 product:LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), full insert sequence Length = 759 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 323 cgcagcagcagaagcagcag 342
>dbj|AK167784.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730024C18 product:LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), full insert sequence Length = 799 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 363 cgcagcagcagaagcagcag 382
>gb|AC134763.4| Rattus norvegicus BAC CH230-221M14 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 222524 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 63796 gcagcagcagaagcagcagg 63815
>gb|AC099023.1| Drosophila melanogaster, chromosome 2R, region 56X-57A, BAC clone BACR48L22, complete sequence Length = 180814 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 155911 gcagcagcagaagcagcagg 155892
>gb|AC099012.1| Drosophila melanogaster, chromosome 2R, region 56F-57X, BAC clone BACR23F24, complete sequence Length = 183592 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 110180 gcagcagcagaagcagcagg 110199
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gcgccatgctgctgggcggg 240 |||||||||||||||||||| Sbjct: 3039756 gcgccatgctgctgggcggg 3039775
>gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, complete sequence Length = 273403 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 190056 gcagcagcagaagcagcagg 190075
>dbj|AK003847.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110020C01 product:U6 snRNA-associated SM-like protein 4, full insert sequence Length = 773 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 335 cgcagcagcagaagcagcag 354
>dbj|AK010910.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510005B08 product:U6 snRNA-associated SM-like protein 4, full insert sequence Length = 774 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 335 cgcagcagcagaagcagcag 354
>gb|AY051546.1| Drosophila melanogaster GH19431 full length cDNA Length = 3095 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 atgcgcagcagcagaagcagcagg 159 ||||||| |||||||||||||||| Sbjct: 56 atgcgcaacagcagaagcagcagg 79
>dbj|AK089028.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430036L24 product:U6 snRNA-associated SM-like protein 4, full insert sequence Length = 786 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 352 cgcagcagcagaagcagcag 371
>gb|AC092221.1|AC092221 Drosophila melanogaster, chromosome 2L, region 22A-22C, BAC clone BACR16D07, complete sequence Length = 170868 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 141406 cgcagcagcagaagcagcag 141425
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agaccatcaccttcaagaac 345 |||||||||||||||||||| Sbjct: 4353267 agaccatcaccttcaagaac 4353248
>dbj|AK008109.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010004O20 product:hypothetical Ubiquitin domain containing protein, full insert sequence Length = 1252 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 676 gcagcagcagaagcagcagg 657
>gb|AY029323.1| Regina ranavirus clone PstI-4.9A orf2-like protein gene, complete cds Length = 4911 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccatggccgccctctcctc 95 |||||||||||||||||||| Sbjct: 2423 gccatggccgccctctcctc 2404
>gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR13N02, complete sequence Length = 172479 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 35800 cgcagcagcagaagcagcag 35781
>gb|AC008184.4|AC008184 Drosophila melanogaster, chromosome 2L, region 36E5-36F2, BAC clone BACR04D05, complete sequence Length = 154730 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 113321 cgcagcagcagaagcagcag 113302
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 cgcggccgtggccatggccgccggcgcc 225 |||||||| |||||||||||||| |||| Sbjct: 21862175 cgcggccgcggccatggccgccgccgcc 21862148
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggccatggccgccggcgcca 226 |||||||||||||||||||| Sbjct: 27885679 ggccatggccgccggcgcca 27885698
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 25304425 gcagcagcagaagcagcagg 25304444 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 10496218 cgcagcagcagaagcagcag 10496199
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 28062568 gcagcagcagaagcagcagg 28062549 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcaggatgg 163 ||||||||||||||||||| |||| Sbjct: 19049597 gcagcagcagaagcagcagaatgg 19049620
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 tccgtcccttccttcgccgccgcc 129 |||| ||||||||||||||||||| Sbjct: 31274287 tccgccccttccttcgccgccgcc 31274310 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 208 gccatggccgccggcgccatgctgctgg 235 |||||||||| ||||||||||| ||||| Sbjct: 4826408 gccatggccggcggcgccatgccgctgg 4826435
>gb|AC007147.8|AC007147 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR19N18, complete sequence Length = 196248 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 161594 cgcagcagcagaagcagcag 161613
>gb|AC009534.9|AC009534 Drosophila melanogaster, chromosome 2L, region 27F-27F, BAC clone BACR01E19, complete sequence Length = 161009 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 113235 cgcagcagcagaagcagcag 113254
>gb|L32871.1|DUNCBR02 Dunaliella bardawil carotenoid binding protein (cbr) gene, exons 2, 3 and complete cds Length = 1325 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 213 gcagcagcagcagcagcaggatgg 236
>gb|AC151984.3| Mus musculus BAC clone RP23-388K15 from chromosome 10, complete sequence Length = 201867 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 catggccgccctctcctctg 97 |||||||||||||||||||| Sbjct: 13275 catggccgccctctcctctg 13256
>gb|AF200220.1|AF200219S2 Homo sapiens FcRn alpha chain (FCGRT) gene, exons 5, 6, 7, and complete cds Length = 4863 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 3458 gcagcagcagcagcagcaggatgg 3435
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tggtgttcgagcccaacgac 306 |||||||||||||||||||| Sbjct: 454459 tggtgttcgagcccaacgac 454478
>ref|NM_205242.1| Gallus gallus low density lipoprotein-related protein 1 (LRP1), mRNA Length = 15598 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 14572 gcagcagcagcagcagcaggatgg 14549
>gb|AE004936.1| Pseudomonas aeruginosa PAO1, section 497 of 529 of the complete genome Length = 14803 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 gccgtggccatggccgccggcgcc 225 |||||||||| ||||||||||||| Sbjct: 1239 gccgtggccaaggccgccggcgcc 1262
>ref|NM_022418.1| Mus musculus RIKEN cDNA 2010004O20 gene (2010004O20Rik), mRNA Length = 1306 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 704 gcagcagcagaagcagcagg 685
>ref|XM_213845.3| PREDICTED: Rattus norvegicus similar to podocan protein (predicted) (LOC288907), mRNA Length = 1905 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cagcagcagaagcagcagga 160 |||||||||||||||||||| Sbjct: 261 cagcagcagaagcagcagga 242
>ref|XM_214318.3| PREDICTED: Rattus norvegicus LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) (predicted) (Lsm4_predicted), mRNA Length = 791 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 349 cgcagcagcagaagcagcag 368
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ggtgttcgacgaggacgccg 388 |||||||||||||||||||| Sbjct: 55231 ggtgttcgacgaggacgccg 55212
>gb|AF220542.1|AF220542 Homo sapiens FcRN protein gene, complete cds Length = 15405 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 14135 gcagcagcagcagcagcaggatgg 14112
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 tccgtcccttccttcgccgccgcc 129 |||| ||||||||||||||||||| Sbjct: 154130 tccgccccttccttcgccgccgcc 154153
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 208 gccatggccgccggcgccatgctgctgg 235 |||||||||| ||||||||||| ||||| Sbjct: 106998 gccatggccggcggcgccatgccgctgg 107025
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 208 gccatggccgccggcgccatgctgctgg 235 |||||||||| ||||||||||| ||||| Sbjct: 68567 gccatggccggcggcgccatgccgctgg 68594
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1118_G04 Length = 134464 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 tccgtcccttccttcgccgccgcc 129 |||| ||||||||||||||||||| Sbjct: 44155 tccgccccttccttcgccgccgcc 44178
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 121096 gcagcagcagaagcagcagg 121115
>dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0042E08 Length = 166257 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 47547 cgcagcagcagaagcagcag 47528
>emb|X74904.1|GGLRPA2MR G.gallus mRNA for LRP/alpha-2-macroglobulin receptor Length = 15598 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 14572 gcagcagcagcagcagcaggatgg 14549
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggccatggccgccggcgcca 226 |||||||||||||||||||| Sbjct: 93757 ggccatggccgccggcgcca 93776
>dbj|AK119233.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E11, full insert sequence Length = 1665 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 165 gcagcagcagaagcagcagg 184
>emb|Z50185.1|PNPCAMR P.nigra mRNA for plastocyanin a Length = 721 Score = 40.1 bits (20), Expect = 5.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 336 cttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 383 |||||||||||| ||||| | ||| |||||| | || ||||||||||| Sbjct: 334 cttcaagaacaatgccggattcccacacaacattgtcttcgacgagga 381
>dbj|AK110495.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-C11, full insert sequence Length = 3143 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 716 gcagcagcagaagcagcagg 735
>dbj|AK103536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132B05, full insert sequence Length = 1666 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 166 gcagcagcagaagcagcagg 185
>gb|AC122236.5| Mus musculus BAC clone RP23-141I22 from 8, complete sequence Length = 214447 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 187140 gcagcagcagaagcagcagg 187121
>dbj|AK060067.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H07, full insert sequence Length = 1139 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggccatggccgccggcgcca 226 |||||||||||||||||||| Sbjct: 118 ggccatggccgccggcgcca 99
>gb|AC007639.5|AC007639 Homo sapiens chromosome 17, clone hRPK.57_A_1, complete sequence Length = 94205 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 31400 gcagcagcagaagcagcagg 31381
>gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68 of 83 of the complete sequence Length = 260027 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 52712 cgcagcagcagaagcagcag 52693
>gb|AE003629.2| Drosophila melanogaster chromosome 2L, section 38 of 83 of the complete sequence Length = 261176 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 249163 cgcagcagcagaagcagcag 249144
>gb|AE003617.3| Drosophila melanogaster chromosome 2L, section 26 of 83 of the complete sequence Length = 257317 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 69597 cgcagcagcagaagcagcag 69616
>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the complete sequence Length = 254899 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 189592 cgcagcagcagaagcagcag 189573
>gb|AE003793.3| Drosophila melanogaster chromosome 2R, section 57 of 73 of the complete sequence Length = 271902 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 204441 gcagcagcagaagcagcagg 204460
>gb|AE003771.3| Drosophila melanogaster chromosome 3R, section 109 of 118 of the complete sequence Length = 242528 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 atgcgcagcagcagaagcagcagg 159 ||||||| |||||||||||||||| Sbjct: 137546 atgcgcaacagcagaagcagcagg 137569
>gb|AE003586.3| Drosophila melanogaster chromosome 2L, section 5 of 83 of the complete sequence Length = 306696 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 214277 cgcagcagcagaagcagcag 214296
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 catgcgcagcagcagaagcagcag 158 ||||||||||||||| |||||||| Sbjct: 69933 catgcgcagcagcagcagcagcag 69956
>emb|AL844516.17| Mouse DNA sequence from clone RP23-367O15 on chromosome 2, complete sequence Length = 142037 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 tgcgcagcagcagaagcagcagga 160 ||||||||||||| |||||||||| Sbjct: 53516 tgcgcagcagcagcagcagcagga 53539
>emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chromosome 14, complete sequence Length = 194408 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 110686 gcagcagcagcagcagcaggatgg 110709
>gb|AC120353.9| Mus musculus chromosome 5, clone RP24-239E2, complete sequence Length = 182659 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 92000 gcagcagcagaagcagcagg 91981
>gb|AC005298.1|AC005298 Drosophila melanogaster DNA sequence (P1s DS04841 (D188) and DS08189 (D218)), complete sequence Length = 95272 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 88692 cgcagcagcagaagcagcag 88673
>gb|AC005286.1|AC005286 Drosophila melanogaster DNA sequence (P1s DS01995 (D179), DS03499 (D217), and DS08132 (D174)), complete sequence Length = 173970 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 116554 gcagcagcagaagcagcagg 116573
>gb|AC004707.1|AC004707 Homo sapiens chromosome 17, clone hRPC.117_B_12, complete sequence Length = 123585 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcaggatgg 163 |||||||||| ||||||||||||| Sbjct: 76722 gcagcagcagcagcagcaggatgg 76745
>emb|CT033773.8| Mouse DNA sequence from clone RP23-176M23 on chromosome 14, complete sequence Length = 133931 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 catgcgcagcagcagaagcagcag 158 |||| ||||||||||||||||||| Sbjct: 987 catgagcagcagcagaagcagcag 1010
>gb|AC004440.1|AC004440 Drosophila melanogaster (P1 DS04892 (D66)) DNA sequence, complete sequence Length = 62400 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcagcagcagaagcagcag 158 |||||||||||||||||||| Sbjct: 59728 cgcagcagcagaagcagcag 59709
>gb|AF017642.1|AF017642 Rhodobacter sphaeroides magnesium chelatase subunits BchI (bchI) and BchD (bchD) genes, complete cds; and BchO (bchO) gene, partial cds Length = 3154 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cggcggcgtgctggtgttcg 295 |||||||||||||||||||| Sbjct: 87 cggcggcgtgctggtgttcg 106
>gb|AC132465.3| Mus musculus BAC clone RP23-58D1 from 10, complete sequence Length = 218313 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 catggccgccctctcctctg 97 |||||||||||||||||||| Sbjct: 127934 catggccgccctctcctctg 127915
>gb|AF389451.1| Tiger frog virus, complete genome Length = 105057 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccatggccgccctctcctc 95 |||||||||||||||||||| Sbjct: 47143 gccatggccgccctctcctc 47124
>dbj|AB209278.1| Homo sapiens mRNA for semaphorin 6B isoform 3 precursor variant protein Length = 3634 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 79 gcagcagcagaagcagcagg 60
>gb|AD000004.1|MSGY224 Mycobacterium tuberculosis sequence from clone y224 Length = 40051 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gccgtggccatggccgccgg 221 |||||||||||||||||||| Sbjct: 22730 gccgtggccatggccgccgg 22711
>gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from clone y126 Length = 37164 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 gttcgacgaggacgccgtgccctc 395 |||| ||||||||||||||||||| Sbjct: 13958 gttcaacgaggacgccgtgccctc 13981
>gb|U36920.1|SGU36920 Schistocerca gregaria ion transport-like protein mRNA, complete cds Length = 514 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 21 gcagcagcagaagcagcagg 40
>gb|U36919.1|SGU36919 Schistocerca gregaria ion transport protein mRNA, complete cds Length = 393 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 21 gcagcagcagaagcagcagg 40
>gb|U23471.1|RLU23471 Rhizobium leguminosarum biovar phaseoli ABC-type permease homolog and sigma-54 factor (rpoN) genes, complete cds and probable sigma-54 modulation protein, partial cds Length = 4558 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 atgcgcagcagcagaagcag 155 |||||||||||||||||||| Sbjct: 140 atgcgcagcagcagaagcag 159
>emb|AL606742.11| Mouse DNA sequence from clone RP23-70A7 on chromosome 3, complete sequence Length = 186559 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 145248 gcagcagcagaagcagcagg 145229 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 145218 gcagcagcagaagcagcagg 145199 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 145059 gcagcagcagaagcagcagg 145040
>dbj|AB030183.1| Mus musculus mRNA, complete cds, clone:1-2 Length = 1306 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 704 gcagcagcagaagcagcagg 685
>dbj|AB022433.1| Homo sapiens semaZ mRNA for semaphorin Z, complete cds Length = 3524 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcagcagaagcagcagg 159 |||||||||||||||||||| Sbjct: 93 gcagcagcagaagcagcagg 74 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,637,204 Number of Sequences: 3902068 Number of extensions: 3637204 Number of successful extensions: 107827 Number of sequences better than 10.0: 236 Number of HSP's better than 10.0 without gapping: 241 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103225 Number of HSP's gapped (non-prelim): 4601 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)