| Clone Name | baet37h06 |
|---|---|
| Clone Library Name | barley_pub |
>RL13A_PICMA (O65055) 60S ribosomal protein L13a| Length = 206 Score = 93.6 bits (231), Expect = 1e-19 Identities = 45/49 (91%), Positives = 48/49 (97%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 MVSGSG+CAK VVVDARHHMLGRLASI+AKELL+GQRVVVVRCEEICMS Sbjct: 1 MVSGSGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMS 49
>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1| Length = 206 Score = 93.6 bits (231), Expect = 1e-19 Identities = 43/49 (87%), Positives = 48/49 (97%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 MVSGSG+CAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEIC+S Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLS 49
>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4| Length = 206 Score = 93.2 bits (230), Expect = 2e-19 Identities = 43/49 (87%), Positives = 48/49 (97%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 MVSGSG+C+KRVVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEIC+S Sbjct: 1 MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLS 49
>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2| Length = 206 Score = 91.7 bits (226), Expect = 5e-19 Identities = 43/49 (87%), Positives = 47/49 (95%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 MVSGSG+C+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+S Sbjct: 1 MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLS 49
>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3| Length = 206 Score = 89.7 bits (221), Expect = 2e-18 Identities = 43/49 (87%), Positives = 45/49 (91%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 MVSGSG+CAKRVVVD RHHMLGRLAS AKELLNGQ VVVVRCEEIC+S Sbjct: 1 MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLS 49
>RL13A_LUPLU (O49885) 60S ribosomal protein L13a| Length = 205 Score = 88.2 bits (217), Expect = 5e-18 Identities = 43/49 (87%), Positives = 47/49 (95%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 MVSGSG+ AKRVVVDARHHMLGRLASIVAKELLNGQ+VV+VR EEIC+S Sbjct: 1 MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICIS 49
>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B| Length = 197 Score = 59.7 bits (143), Expect = 2e-09 Identities = 28/40 (70%), Positives = 36/40 (90%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +S Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNIS 45
>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A| Length = 197 Score = 59.7 bits (143), Expect = 2e-09 Identities = 28/40 (70%), Positives = 36/40 (90%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +S Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNIS 45
>RL16_NEUCR (Q9P720) 60S ribosomal protein L16| Length = 202 Score = 57.4 bits (137), Expect = 1e-08 Identities = 26/38 (68%), Positives = 34/38 (89%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 VV+D + H+LGRLASIVAK+LLNGQ++VVVRCE + +S Sbjct: 8 VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNIS 45
>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C| Length = 197 Score = 56.6 bits (135), Expect = 2e-08 Identities = 26/40 (65%), Positives = 35/40 (87%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 K V++DA+ H++GRLAS VAK+LL GQ+VVVVRCEE+ +S Sbjct: 6 KLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNIS 45
>RL13A_CYAPA (P93099) 60S ribosomal protein L13a| Length = 200 Score = 55.8 bits (133), Expect = 3e-08 Identities = 29/40 (72%), Positives = 33/40 (82%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 K VVVD R H+LGRLA+ +AKELLNGQRVV VR EEI +S Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINIS 43
>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A| Length = 205 Score = 55.5 bits (132), Expect = 4e-08 Identities = 26/45 (57%), Positives = 35/45 (77%) Frame = +1 Query: 82 SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +G+ + VV+D R H+LGRLAS+VAK LL G +V VVRCEE+ +S Sbjct: 2 TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLS 46
>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A| Length = 204 Score = 55.5 bits (132), Expect = 4e-08 Identities = 25/45 (55%), Positives = 35/45 (77%) Frame = +1 Query: 82 SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +G K +V+D R H+LGRLA+++AK LL G +VVVVRCE+I +S Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINIS 46
>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)| Length = 198 Score = 54.7 bits (130), Expect = 6e-08 Identities = 24/38 (63%), Positives = 34/38 (89%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 VV+D + H++GRLAS+VAK+LLNGQ++VVVR EE+ +S Sbjct: 6 VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNIS 43
>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a| Length = 202 Score = 54.7 bits (130), Expect = 6e-08 Identities = 24/44 (54%), Positives = 36/44 (81%) Frame = +1 Query: 85 GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 G+ + +++D ++H+LGRLASIVAK+LL G +VVV+R EEI +S Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVIS 45
>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A| Length = 204 Score = 54.7 bits (130), Expect = 6e-08 Identities = 24/45 (53%), Positives = 35/45 (77%) Frame = +1 Query: 82 SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +G K +V+D R H+LGRLA+++AK LL G +VVVVRCE++ +S Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNIS 46
>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)| Length = 197 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/38 (60%), Positives = 33/38 (86%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 VV+DA+ H+LGRLAS +AK++LNGQ++VVVR E + +S Sbjct: 5 VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNIS 42
>RL13A_RAT (P35427) 60S ribosomal protein L13a| Length = 202 Score = 50.4 bits (119), Expect = 1e-06 Identities = 24/38 (63%), Positives = 33/38 (86%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +S Sbjct: 6 LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINIS 43
>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a| Length = 202 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/38 (63%), Positives = 33/38 (86%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +S Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINIS 43
>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)| (Tum-P198 antigen) Length = 202 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/38 (63%), Positives = 33/38 (86%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +S Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINIS 43
>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a| Length = 202 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/38 (63%), Positives = 33/38 (86%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +S Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINIS 43
>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)| Length = 202 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/38 (63%), Positives = 33/38 (86%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +S Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINIS 43
>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a| Length = 202 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/38 (63%), Positives = 33/38 (86%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +S Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINIS 43
>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)| Length = 137 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/38 (63%), Positives = 33/38 (86%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +S Sbjct: 3 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINIS 40
>RL13_ARCFU (O29137) 50S ribosomal protein L13P| Length = 156 Score = 44.7 bits (104), Expect = 7e-05 Identities = 20/33 (60%), Positives = 27/33 (81%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEE 204 V+DA H+LGRL+S +AK LLNG+R+VVV E+ Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEK 50
>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P| Length = 155 Score = 41.6 bits (96), Expect = 6e-04 Identities = 22/41 (53%), Positives = 29/41 (70%) Frame = +1 Query: 94 AKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 A+ +VVD ++GRLAS+VAK LL G RV VV E+I +S Sbjct: 8 AREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLS 48
>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal| protein L13P; 30S ribosomal protein S9P] Length = 282 Score = 41.2 bits (95), Expect = 7e-04 Identities = 16/38 (42%), Positives = 30/38 (78%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 ++++ H+LGRLAS+V+K+LL G+ V+V+ E+I ++ Sbjct: 4 MIINGEGHILGRLASVVSKKLLEGEEVIVLNAEKILIT 41
>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198| homolog) (Fragment) Length = 189 Score = 40.0 bits (92), Expect = 0.002 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = +1 Query: 127 MLGRLASIVAKELLNGQRVVVVRCEEICMS 216 +LGRLA+IVA E+L G +VVVVRCE I +S Sbjct: 1 LLGRLAAIVANEVLLGHKVVVVRCEGINIS 30
>RL13_METJA (P54023) 50S ribosomal protein L13P| Length = 137 Score = 37.4 bits (85), Expect = 0.011 Identities = 17/37 (45%), Positives = 26/37 (70%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 V+DA +LGRLAS VAK +L G+ +V+V E + ++ Sbjct: 3 VIDAEGAILGRLASEVAKRVLRGEEIVIVNAEMVVIT 39
>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P| Length = 145 Score = 36.6 bits (83), Expect = 0.018 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEE 204 VVVDAR ++GR+AS VA+ L G RV VV E+ Sbjct: 10 VVVDARDCIMGRVASNVAERALAGDRVAVVNAEQ 43
>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)| Length = 145 Score = 35.8 bits (81), Expect = 0.031 Identities = 17/33 (51%), Positives = 25/33 (75%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCE 201 V+VDAR ++GR+AS VA++ L+G+ V VV E Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAE 42
>RL13_SULAC (P39473) 50S ribosomal protein L13P| Length = 148 Score = 35.0 bits (79), Expect = 0.053 Identities = 16/38 (42%), Positives = 28/38 (73%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMS 216 V+VDA + +LGR+++ +AK L +G++V VV E+ +S Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIIS 45
>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P| Length = 142 Score = 35.0 bits (79), Expect = 0.053 Identities = 17/33 (51%), Positives = 24/33 (72%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEE 204 +++A +LGRLAS VAK LL G+ VV+V E+ Sbjct: 3 IINAEGLILGRLASRVAKMLLEGEEVVIVNAEK 35
>RL13_PYRHO (O59300) 50S ribosomal protein L13P| Length = 142 Score = 34.3 bits (77), Expect = 0.090 Identities = 17/33 (51%), Positives = 24/33 (72%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEE 204 +++A +LGRLAS VAK LL G+ VV+V E+ Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEK 35
>NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 protein) (Fusion| 2 protein) Length = 314 Score = 30.4 bits (67), Expect = 1.3 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +3 Query: 3 IPPPPPELQTLVAAPPP 53 +PPPPP Q+L A+PPP Sbjct: 269 LPPPPPLPQSLTASPPP 285
>CAPU_DROME (Q24120) Protein cappuccino| Length = 1059 Score = 30.0 bits (66), Expect = 1.7 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 6 PPPPPELQTLVAAPPP 53 PPPPP L VA PPP Sbjct: 488 PPPPPPLHAFVAPPPP 503
>VPAP_HCMVA (P16790) DNA polymerase processivity factor (Polymerase accessory| protein) (PAP) (ICP36 protein) Length = 433 Score = 29.3 bits (64), Expect = 2.9 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = -2 Query: 52 GGGAATRVWSSGGGGG 5 GGG+ TR SSGGGGG Sbjct: 345 GGGSGTRKMSSGGGGG 360
>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 367 Score = 29.3 bits (64), Expect = 2.9 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 6 PPPPPELQTLVAAPPP 53 PPPPP L AAPPP Sbjct: 52 PPPPPPLPLAAAAPPP 67
>RL13A_SPIOL (P82454) 60S ribosomal protein L13a (Fragment)| Length = 15 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = +1 Query: 73 VSGSGVCAKRVVVDA 117 VSGSG+ AKRVVVDA Sbjct: 1 VSGSGIMAKRVVVDA 15
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 28.5 bits (62), Expect = 5.0 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = +3 Query: 3 IPPPPPELQTLVAAPPP 53 IPPPPP L V PPP Sbjct: 683 IPPPPPPLPGSVGVPPP 699
>COQ6_CAEEL (O01884) Probable ubiquinone biosynthesis monooxgenase coq-6 (EC| 1.14.13.-) Length = 451 Score = 28.1 bits (61), Expect = 6.5 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 161 SLATIDARRPSMWWRASTTTRLAHTPEPDTISPLTW 54 ++ T + + + W R +T +A P DT+S LTW Sbjct: 215 NIETANGKNETAWQRFTTLGPVALLPLSDTVSGLTW 250
>LATS1_HUMAN (O95835) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large| tumor suppressor homolog 1) (WARTS protein kinase) (h-warts) Length = 1130 Score = 27.7 bits (60), Expect = 8.4 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +3 Query: 6 PPPPPELQTLVAAPPP 53 PPPPP+++++ PPP Sbjct: 236 PPPPPQVRSVTPPPPP 251
>LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large| tumor suppressor homolog 1) (WARTS protein kinase) Length = 1129 Score = 27.7 bits (60), Expect = 8.4 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +3 Query: 6 PPPPPELQTLVAAPPP 53 PPPPP+++++ PPP Sbjct: 236 PPPPPQVRSVTPPPPP 251
>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor| Length = 217 Score = 27.7 bits (60), Expect = 8.4 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 7/52 (13%) Frame = -1 Query: 218 PDMQISSQRTTTTR-------CPLSSSLATIDARRPSMWWRASTTTRLAHTP 84 P + +S TTTTR C +S+ T P+ + STTT H P Sbjct: 71 PTCKSTSTTTTTTRAPPTKPTCKSTSTTTTTTRAPPTTTCKTSTTTTTTHKP 122
>DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-related formin-2)| (DRF2) Length = 1101 Score = 27.7 bits (60), Expect = 8.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 3 IPPPPPELQTLVAAPPP 53 +PPPPP L ++ PPP Sbjct: 577 LPPPPPPLPGMMGIPPP 593 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,915,477 Number of Sequences: 219361 Number of extensions: 319935 Number of successful extensions: 3015 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 1854 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2886 length of database: 80,573,946 effective HSP length: 48 effective length of database: 70,044,618 effective search space used: 1681070832 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)