>emb|Y00966.1|HVPSA2 Hordeum vulgare pot. psaE mRNA
          Length = 610

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                       
Query: 46  ctagctagcacccacaaacagcacctgctgccgtcccgatggcgagcaccaacatggcgt 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctagctagcacccacaaacagcacctgctgccgtcccgatggcgagcaccaacatggcgt 60

                                                                       
Query: 106 cggccacctccagattcatgctggcggcgggcatccccagcggcgccaacggcggcgtga 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cggccacctccagattcatgctggcggcgggcatccccagcggcgccaacggcggcgtga 120

                                                                       
Query: 166 gcagccgtgtcagcttcctcccgtccaaccggctcggcttgaagctcgtggcccgggccg 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcagccgtgtcagcttcctcccgtccaaccggctcggcttgaagctcgtggcccgggccg 180

                                                                       
Query: 226 aggagccgactgccgccgcgccggcggaaccagcaccggcggcggacgagaaaccggaag 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggagccgactgccgccgcgccggcggaaccagcaccggcggcggacgagaaaccggaag 240

                                                          
Query: 286 ccgccgtggccaccaaagagcccgccaaagccaagccgccgccgagg 332
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgccgtggccaccaaagagcccgccaaagccaagccgccgccgagg 287

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 45/52 (86%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                    
Query: 82       cgatggcgagcacca---acatggcgtcggccacctccagattcatgctggc 130
                |||||||||||||||   || |||||||||||||||| || ||| |||||||
Sbjct: 14479794 cgatggcgagcaccattaacgtggcgtcggccacctcgaggttcctgctggc 14479845

>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0673E01
          Length = 125909

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 45/52 (86%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                  
Query: 82     cgatggcgagcacca---acatggcgtcggccacctccagattcatgctggc 130
              |||||||||||||||   || |||||||||||||||| || ||| |||||||
Sbjct: 100125 cgatggcgagcaccattaacgtggcgtcggccacctcgaggttcctgctggc 100176

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 193     accggctcggcttgaagctcgtggcc 218
               ||||||||||||||||||| ||||||
Sbjct: 1007064 accggctcggcttgaagctggtggcc 1007089

>ref|XM_477796.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 450

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 43/50 (86%), Gaps = 3/50 (6%)
 Strand = Plus / Plus

                                                             
Query: 84  atggcgagcacca---acatggcgtcggccacctccagattcatgctggc 130
           |||||||||||||   || |||||||||||||||| || ||| |||||||
Sbjct: 1   atggcgagcaccattaacgtggcgtcggccacctcgaggttcctgctggc 50

>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08,
              complete sequence
          Length = 165440

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gccgtcccgatggcgagcac 94
              ||||||||||||||||||||
Sbjct: 158123 gccgtcccgatggcgagcac 158142



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gccgtcccgatggcgagcac 94
              ||||||||||||||||||||
Sbjct: 141757 gccgtcccgatggcgagcac 141776

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 99      atggcgtcggccacctccag 118
               ||||||||||||||||||||
Sbjct: 5856761 atggcgtcggccacctccag 5856742

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     gcgtgagcagccgtgtcagc 179
               ||||||||||||||||||||
Sbjct: 3667807 gcgtgagcagccgtgtcagc 3667826

>emb|AL390954.10| Human DNA sequence from clone RP11-521L15 on chromosome 13, complete
             sequence
          Length = 76587

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    agctagctagcacccacaaa 63
             ||||||||||||||||||||
Sbjct: 20042 agctagctagcacccacaaa 20061

>emb|AL627187.13| Mouse DNA sequence from clone RP23-319B15 on chromosome 11 Contains the
             3' end of the Rnf130 gene for ring finger protein 130, a
             heterogeneous nuclear ribonucleoprotein A family
             pseudogene, a novel gene, genes 2700008N14Rik and
             3010026O09Rik, the Sqstm1 gene for sequestosome 1, the
             Mgat4b gene for mannoside acetylglucosaminyltransferase 4
             isoenzyme B, the Ltc4s gene for leukotriene C4 synthase
             and four CpG islands, complete sequence
          Length = 201654

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    gaaggagcgagctagctagc 54
             ||||||||||||||||||||
Sbjct: 45698 gaaggagcgagctagctagc 45679

>emb|AL645639.17| Mouse DNA sequence from clone RP23-370G8 on chromosome 11 Contains a
             novel gene (LOC327917), the 5' end of the Adamts2 gene for
             a disintegrin-like and metalloprotease (reprolysin type)
             with thrombospondin type 1 motif 2, two novel genes
             (4930579K21) and a CpG island, complete sequence
          Length = 188520

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    gaaggagcgagctagctagc 54
             ||||||||||||||||||||
Sbjct: 55912 gaaggagcgagctagctagc 55893

>dbj|AK220529.1| Mus musculus mRNA for mKIAA4183 protein
          Length = 4345

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   gaaggagcgagctagctagc 54
            ||||||||||||||||||||
Sbjct: 3504 gaaggagcgagctagctagc 3485

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     atgctggcggcgggcatccc 142
               ||||||||||||||||||||
Sbjct: 1423373 atgctggcggcgggcatccc 1423392

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 154     acggcggcgtgagcagccgtgtca 177
               |||||||||||||||||| |||||
Sbjct: 1612589 acggcggcgtgagcagccttgtca 1612566

>gb|DQ067503.1| Otolemur garnettii msh homeobox 1-like protein (MSX1) gene, exon 1
           and partial cds
          Length = 870

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 gactgccgccgcgccggcgg 252
           ||||||||||||||||||||
Sbjct: 108 gactgccgccgcgccggcgg 89

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 75       gccgtcccgatggcgagcac 94
                ||||||||||||||||||||
Sbjct: 18578808 gccgtcccgatggcgagcac 18578827



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 75       gccgtcccgatggcgagcac 94
                ||||||||||||||||||||
Sbjct: 18562442 gccgtcccgatggcgagcac 18562461

>gb|DQ317418.1| Panicum miliaceum KNOTTED1 homeodomain protein (KN1) mRNA, partial
           cds
          Length = 1002

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 143 cagcggcgccaacggcggcg 162
           ||||||||||||||||||||
Sbjct: 156 cagcggcgccaacggcggcg 175

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     gccgactgccgccgcgccgg 249
               ||||||||||||||||||||
Sbjct: 1673129 gccgactgccgccgcgccgg 1673148

>dbj|AK072871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143F18, full
           insert sequence
          Length = 2402

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 139 tccccagcggcgccaacggcggcg 162
           ||||||||||||||| ||||||||
Sbjct: 226 tccccagcggcgccagcggcggcg 249

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     atgctggcggcgggcatccc 142
               ||||||||||||||||||||
Sbjct: 1447867 atgctggcggcgggcatccc 1447886

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 75       gccgtcccgatggcgagcac 94
                ||||||||||||||||||||
Sbjct: 18738209 gccgtcccgatggcgagcac 18738228



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 75       gccgtcccgatggcgagcac 94
                ||||||||||||||||||||
Sbjct: 18721843 gccgtcccgatggcgagcac 18721862

>dbj|AB020341.1| Desulfovibrio vulgaris genes for Catalase and hypothetical
            transmembrane protein, partial and complete cds
          Length = 3274

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 129  gcggcgggcatccccagcgg 148
            ||||||||||||||||||||
Sbjct: 2894 gcggcgggcatccccagcgg 2913


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,309,326
Number of Sequences: 3902068
Number of extensions: 2309326
Number of successful extensions: 50144
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 49454
Number of HSP's gapped (non-prelim): 691
length of query: 332
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 310
effective length of database: 17,147,199,772
effective search space: 5315631929320
effective search space used: 5315631929320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)