>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator|
            of retinoic acid and thyroid hormone receptor) (SMRT)
            (SMRTe) (Thyroid-, retinoic-acid-receptor-associated
            corepressor) (T3 receptor-associating factor) (TRAC) (CTG
            repeat p
          Length = 2517

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 187  GALQLQPQHPRRVLQAGEASRPAHQGPDHRLLHDP 291
            G L+L+P H   V    EA R  H+ P   L H P
Sbjct: 1403 GPLKLKPAHEGLVATVKEAGRSIHEIPREELRHTP 1437

>T4S1_MESAU (P49111) Transmembrane 4 L6 family member 1 (Tumor-associated|
           antigen L6 homolog) (MM3)
          Length = 202

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 290 LEGDDCCSCW 319
           LEG+DCC CW
Sbjct: 70  LEGEDCCGCW 79

>HMC6_DESVH (P33393) Protein DVU0531 (HMC operon ORF 6)|
          Length = 461

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 215 LDEFFKQEKPLVQRTKDQITDYCTTLEGDDCCSCWDAYFELNK 343
           + +F KQ    +Q  +DQI      L    C +CWDA  +L +
Sbjct: 389 IGKFRKQRNKALQTKRDQILATGAKLVVAPCHNCWDAIRDLEE 431

>BUR1_DEBHA (Q6BV06) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC|
           2.7.11.23)
          Length = 608

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +2

Query: 179 PKREPFSSSRSILDEFFKQEKPLVQRTKDQITDY 280
           PK  P SSSR++ D+F K++    ++ +  +TD+
Sbjct: 535 PKPNPQSSSRNVSDQFKKRKLLPDEQNESDLTDF 568

>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 19/77 (24%)
 Frame = +2

Query: 131 GRRSVAVRALRDYGSIPKREPFSSSRSIL-----------DEFFKQEKPLVQRTKD---- 265
           G R+   R    YG  P+REP  S R +            D +  ++ P  + T+D    
Sbjct: 175 GGRTPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYTPP 234

Query: 266 ----QITDYCTTLEGDD 304
                  DYC +   DD
Sbjct: 235 PRDYTYRDYCHSSSRDD 251


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,519,291
Number of Sequences: 219361
Number of extensions: 323603
Number of successful extensions: 1268
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)