Clone Information

BLAST Search Result

Clone Name	baet37c01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	150	2e-36
2	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	147	1e-35
3	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	146	3e-35
4	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	86	6e-17
5	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	81	1e-15
6	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	75	1e-13
7	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	73	3e-13
8	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	65	9e-11
9	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	65	9e-11
10	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	65	1e-10
11	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	62	6e-10
12	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	62	7e-10
13	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	59	5e-09
14	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	59	5e-09
15	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	59	5e-09
16	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	57	2e-08
17	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	57	2e-08
18	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	56	5e-08
19	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	56	5e-08
20	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	55	7e-08
21	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	55	9e-08
22	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	55	9e-08
23	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	55	9e-08
24	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	55	9e-08
25	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	55	9e-08
26	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	55	9e-08
27	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	55	1e-07
28	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	55	1e-07
29	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	55	1e-07
30	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	55	1e-07
31	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	55	1e-07
32	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	55	1e-07
33	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	54	2e-07
34	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	54	2e-07
35	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	54	2e-07
36	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	54	2e-07
37	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	54	2e-07
38	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	54	2e-07
39	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	54	2e-07
40	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	54	2e-07
41	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	54	2e-07
42	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	54	2e-07
43	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	54	2e-07
44	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	54	2e-07
45	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	54	3e-07
46	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	54	3e-07
47	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	54	3e-07
48	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	54	3e-07
49	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	54	3e-07
50	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	54	3e-07
51	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	54	3e-07
52	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	54	3e-07
53	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	54	3e-07
54	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	54	3e-07
55	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	53	3e-07
56	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	53	3e-07
57	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	53	3e-07
58	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	53	3e-07
59	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	53	3e-07
60	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	53	3e-07
61	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	53	3e-07
62	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	53	4e-07
63	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	53	4e-07
64	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	52	8e-07
65	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	52	8e-07
66	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	52	1e-06
67	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	52	1e-06
68	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	51	1e-06
69	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	50	3e-06
70	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	50	4e-06
71	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	49	5e-06
72	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	49	8e-06
73	CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 membe...	38	0.015
74	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	37	0.033
75	CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl...	36	0.043
76	CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...	36	0.043
77	CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII ty...	36	0.043
78	CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...	36	0.043
79	CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...	36	0.043
80	L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chlor...	35	0.13
81	CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII typ...	34	0.16
82	POLN_HEVMY (Q04610) Non-structural polyprotein (EC 2.7.7.48) (RN...	30	3.1
83	NU3M_BRARE (Q9MIY3) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	30	3.1
84	PNKP_HUMAN (Q96T60) Bifunctional polynucleotide phosphatase/kina...	30	4.1
85	NU3M_CYPCA (P24974) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	29	5.3
86	NU3M_CARAU (O78686) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	29	5.3
87	NU3M_ONCTS (P25707) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	29	6.9
88	NU3M_ONCNE (P20688) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	29	6.9
89	NU3M_ONCMY (P11629) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	29	6.9
90	NU3M_ONCMA (Q37108) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	29	6.9
91	NU3M_ONCKI (P20687) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	29	6.9
92	NU3M_ONCKE (Q35262) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	29	6.9
93	NU3M_ONCGO (P20686) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	29	6.9
94	AROC_TOXGO (O02607) Chorismate synthase (EC 4.2.3.5) (5-enolpyru...	29	6.9
95	RAGE_HUMAN (Q15109) Advanced glycosylation end product-specific ...	28	9.1
96	NU3M_SCYCA (O79408) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	28	9.1
97	NU3M_SALTR (O03252) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	28	9.1
98	NU3M_SALSA (Q35929) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	28	9.1
99	NU3M_CROLA (P34192) NADH-ubiquinone oxidoreductase chain 3 (EC 1...	28	9.1
100	FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein ...	28	9.1

>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score =  150 bits (378), Expect = 2e-36
 Identities = 65/76 (85%), Positives = 70/76 (92%)
 Frame = +1

Query: 244 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 423
           KKSWIPA KS    ++P WLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
Sbjct: 52  KKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 111

Query: 424 LGIFIGQAYSGVPWFE 471
           LGIF+GQA+SG+PWFE
Sbjct: 112 LGIFVGQAWSGIPWFE 127

to top

>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score =  147 bits (371), Expect = 1e-35
 Identities = 63/76 (82%), Positives = 69/76 (90%)
 Frame = +1

Query: 244 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 423
           KKSWIPA K    F++P WLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAM AV
Sbjct: 57  KKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAV 116

Query: 424 LGIFIGQAYSGVPWFE 471
           LGIF+GQA++G+PWFE
Sbjct: 117 LGIFVGQAWTGIPWFE 132

to top

>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score =  146 bits (368), Expect = 3e-35
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = +1

Query: 244 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 423
           KKSWIPA +     ++P WLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
Sbjct: 52  KKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 111

Query: 424 LGIFIGQAYSGVPWFE 471
           LGIF+GQA+SG+PWFE
Sbjct: 112 LGIFVGQAWSGIPWFE 127

to top

>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 85.5 bits (210), Expect = 6e-17
 Identities = 39/66 (59%), Positives = 42/66 (63%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  W P          P WLDGSLPGDFGFDPLGLG DP  LKW  +AEL+H RWAM  
Sbjct: 64  DRPLWFPGSTP------PEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLG 117

Query: 421 VLGIFI 438
             GIFI
Sbjct: 118 AAGIFI 123



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGK-DPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLG G   PA +K  R  E+ +GR AM AV+G +    Y+G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244

to top

>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 37/66 (56%), Positives = 42/66 (63%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  W P          P WLDGSLPGDFGFDPLGL  DP  L+W ++AEL+H RWAM  
Sbjct: 64  DRPLWFPGSTP------PPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLG 117

Query: 421 VLGIFI 438
             GIFI
Sbjct: 118 AAGIFI 123



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGK-DPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLG G   PA +K  R  E+ +GR AM AV+G +    Y+G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244

to top

>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPW 465
           PS+LDGS PGDFGFD LGLG+ PA L+ Y+E+ELIH RWAM AV GI + +A     W
Sbjct: 56  PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNW 113



 Score = 36.6 bits (83), Expect = 0.033
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 331 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ-AYSG 456
           FDPLG  KDPA  +  +  E+ +GR A+ A++G  + Q AY G
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLG 215

to top

>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 33/72 (45%), Positives = 46/72 (63%)
 Frame = +1

Query: 244 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 423
           K  W+P   S      P +L GSL GD GFDPLGL +DP  LKW+ +AEL++GRWAM  V
Sbjct: 54  KGEWLPGLAS------PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV 107

Query: 424 LGIFIGQAYSGV 459
            G+ + + ++ +
Sbjct: 108 AGMLLPEVFTKI 119

to top

>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  W+  F ++     P++L G  PGD+G+D  GL  DP   K YRE E+IH RWA+  
Sbjct: 43  DRAKWLGPFSTNT----PAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98

Query: 421 VLGIFIGQ---AYSGVPWFE 471
            LGI   +    Y+GV + E
Sbjct: 99  ALGILTPELLSTYAGVKFGE 118



 Score = 35.8 bits (81), Expect = 0.057
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG+  FDPLGL  DP      +  E+ +GR AM +  G F+    +G
Sbjct: 176 LDPLYPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTG 226

to top

>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 39/105 (37%), Positives = 43/105 (40%), Gaps = 45/105 (42%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAF----------------------------------- 366
           P WLDGSLPGD GFDPLGL K   F                                   
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 367 ----------LKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 471
                     L  +RE ELIHGRWAM A LG  + +A +GV W E
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVE 163

to top

>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 40/132 (30%), Positives = 51/132 (38%), Gaps = 43/132 (32%)
 Frame = +1

Query: 199 KPVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW- 375
           K   ++        D+  W P        I+P WLDGSL GD+GFDP GLGK   +L++ 
Sbjct: 40  KAAPKKSAKKTVTTDRPLWYPGA------ISPDWLDGSLVGDYGFDPFGLGKPAEYLQFD 93

Query: 376 ------------------------------------------YREAELIHGRWAMAAVLG 429
                                                     +RE ELIHGRWAM A LG
Sbjct: 94  IDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLG 153

Query: 430 IFIGQAYSGVPW 465
               +  +GV W
Sbjct: 154 ALSVEWLTGVTW 165



 Score = 38.5 bits (88), Expect = 0.009
 Identities = 21/47 (44%), Positives = 25/47 (53%)
 Frame = +1

Query: 316 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           PG   FDPLGL  DP      + AE+ H R AM A LG  +  A +G
Sbjct: 218 PGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATG 264

to top

>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 28/63 (44%), Positives = 37/63 (58%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           ++  W+  +  +A    P++L G  PGD+G+D  GL  DP   K YRE ELIH RWAM  
Sbjct: 40  NRAKWLGPYSENA---TPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLG 96

Query: 421 VLG 429
            LG
Sbjct: 97  ALG 99



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG+  FDPLGL  DP      +  E+ +GR A  ++ G F+    +G
Sbjct: 173 LDPLYPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTG 223

to top

>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 43/118 (36%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW--------------- 375
           D+  W P  KS      P +LDGSL GD+GFDP GLGK   +L++               
Sbjct: 51  DRPLWFPGAKS------PEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYG 104

Query: 376 ----------------------------YREAELIHGRWAMAAVLGIFIGQAYSGVPW 465
                                       +RE ELIHGRWAM A LG    +  +GV W
Sbjct: 105 EVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTW 162



 Score = 37.4 bits (85), Expect = 0.019
 Identities = 20/47 (42%), Positives = 24/47 (51%)
 Frame = +1

Query: 316 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           PG   FDPLGL  DP      + AE+ H R AM   LG  +  A +G
Sbjct: 215 PGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATG 261

to top

>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ---AYSGVP 462
           P +L G  PGD+G+D  GL  DP     YRE ELIH RWA+   LGI   +    Y+GV 
Sbjct: 51  PEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQ 110

Query: 463 WFE 471
           + E
Sbjct: 111 FGE 113



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG   FDPLGL  DP      +  E+ +GR AM + LG F+    +G
Sbjct: 173 LDTLYPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTG 223

to top

>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 29/69 (42%), Positives = 40/69 (57%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D++ ++P    D   I P +L+G + GD+G+DP GLGK P     Y+  ELIH RWAM  
Sbjct: 66  DRRIFLPDGLLDRSEI-PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLG 124

Query: 421 VLGIFIGQA 447
             G  I +A
Sbjct: 125 AAGFIIPEA 133



 Score = 38.5 bits (88), Expect = 0.009
 Identities = 22/40 (55%), Positives = 26/40 (65%)
 Frame = +1

Query: 331 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAY 450
           FDPLGL KDP      +  E+ +GR AM A+LG FI QAY
Sbjct: 206 FDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFI-QAY 244

to top

>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 37/131 (28%), Positives = 48/131 (36%), Gaps = 43/131 (32%)
 Frame = +1

Query: 202 PVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW-- 375
           P  ++        D+  W P          P WLDGS+ GD GFDP GLGK   +L++  
Sbjct: 42  PPPKKSRQVQDDGDRLVWFPGANP------PEWLDGSMIGDRGFDPFGLGKPAEYLQYDF 95

Query: 376 -----------------------------------------YREAELIHGRWAMAAVLGI 432
                                                    +RE ELIHGRWAM   LG 
Sbjct: 96  DGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGA 155

Query: 433 FIGQAYSGVPW 465
              +A +G+ W
Sbjct: 156 IAVEALTGIAW 166



 Score = 37.4 bits (85), Expect = 0.019
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = +1

Query: 316 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           PG + FDPLGL  DP  L   + AE+ H R AM A L   +  A++G
Sbjct: 219 PGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTG 264

to top

>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 28/60 (46%), Positives = 34/60 (56%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 471
           PSWL+G   GD GFDP GL  DP   +  R AE+ HGR AM AV+G  +        W+E
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGKGIWYE 71



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 25/60 (41%), Positives = 30/60 (50%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 471
           P+ L G  P D GFDPL L  DP      R AE+ HGR AM   +G  + +      WFE
Sbjct: 197 PALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGKGAWFE 256



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 24/77 (31%), Positives = 38/77 (49%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           +++ W P        + P +L G   GD GFDP GL  DP   +  + AE+ H R +M A
Sbjct: 370 ERELWFP------NIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLA 423

Query: 421 VLGIFIGQAYSGVPWFE 471
           ++G  + +      WF+
Sbjct: 424 LVGCLVPELLGNGAWFQ 440



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +1

Query: 328 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           GFDPL L  D     + +EAE+ +GR A+ A+LG
Sbjct: 111 GFDPLNLTTD-----YTKEAEIKNGRLALTALLG 139

to top

>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 25/47 (53%), Positives = 30/47 (63%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IHGRWAM   LG
Sbjct: 64  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALG 110



 Score = 32.3 bits (72), Expect = 0.63
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL  D       +  E+ +GR AM ++ G F+    +G
Sbjct: 182 EVVDPLYPGGS------FDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234

to top

>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 27/63 (42%), Positives = 35/63 (55%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  ++  F  +A    PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM  
Sbjct: 52  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 107

Query: 421 VLG 429
            LG
Sbjct: 108 ALG 110



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  EL +GR AM ++ G F+    +G
Sbjct: 182 EIVDPLYPGGS------FDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTG 234

to top

>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGI--------FIGQA 447
           PS+L+G  PGD+G+D  GL  DP      R  E+IHGRWAM   LG         ++G  
Sbjct: 67  PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVE 126

Query: 448 YSGVPWFE 471
           +    WF+
Sbjct: 127 FKEPVWFK 134



 Score = 36.6 bits (83), Expect = 0.033
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +1

Query: 316 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 192 PGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238

to top

>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 29/77 (37%), Positives = 39/77 (50%)
 Frame = +1

Query: 199 KPVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           KP T +        D+  ++  F  ++    PS+L G  PGD+G+D  GL  DP      
Sbjct: 41  KPKTVQSSSPWYGPDRVKYLGPFSGES----PSYLTGEFPGDYGWDTAGLSADPETFAKN 96

Query: 379 REAELIHGRWAMAAVLG 429
           RE E+IH RWAM   LG
Sbjct: 97  RELEVIHCRWAMLGALG 113



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L+G  PGD+G+D  GL  DP      R  E+IHGRWAM   LG
Sbjct: 64  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALG 109



 Score = 36.6 bits (83), Expect = 0.033
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +1

Query: 316 PGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 189 PGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 69  SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALG 115



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 187 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 239

to top

>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 27/71 (38%), Positives = 38/71 (53%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  ++  F  +A    PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM  
Sbjct: 54  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 109

Query: 421 VLGIFIGQAYS 453
            LG    + ++
Sbjct: 110 ALGCVFPELFA 120



 Score = 35.8 bits (81), Expect = 0.057
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E I+P +  GS      FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 184 EVIDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236

to top

>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 27/71 (38%), Positives = 38/71 (53%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  ++  F  +A    PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM  
Sbjct: 55  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 110

Query: 421 VLGIFIGQAYS 453
            LG    + ++
Sbjct: 111 ALGCVFPELFA 121



 Score = 34.7 bits (78), Expect = 0.13
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           +D   PG   FDPLGL +DP      +  E  +GR AM ++ G FI    +G
Sbjct: 187 VDPLYPGG-SFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTG 237

to top

>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 27/65 (41%), Positives = 32/65 (49%)
 Frame = +1

Query: 259 PAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI 438
           P F        PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG   
Sbjct: 54  PKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 113

Query: 439 GQAYS 453
            +  S
Sbjct: 114 PELLS 118



 Score = 35.8 bits (81), Expect = 0.057
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 184 LDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234

to top

>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALG 114



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 186 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 238

to top

>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111



 Score = 35.0 bits (79), Expect = 0.097
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 186 DPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 450
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG          G  +
Sbjct: 46  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 105

Query: 451 SGVPWFE 471
               WF+
Sbjct: 106 GEASWFK 112



 Score = 32.0 bits (71), Expect = 0.82
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPL L  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 166 DPIYPGG-SFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 215

to top

>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 27/63 (42%), Positives = 35/63 (55%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  ++  F  +A    PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM  
Sbjct: 55  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 110

Query: 421 VLG 429
            LG
Sbjct: 111 ALG 113



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 188 DPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALG 112



 Score = 34.7 bits (78), Expect = 0.13
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 331 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 28  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 74



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL + P      +  EL +GR AM ++ G F+    +G
Sbjct: 146 EVVDPLYPGGS------FDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTG 198

to top

>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALG 112



 Score = 34.7 bits (78), Expect = 0.13
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 331 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 62  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 107



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 179 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 231

to top

>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111



 Score = 34.7 bits (78), Expect = 0.13
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  G+      FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 183 EVVDPLYPGGT------FDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALG 111



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG   FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 185 LDPLYPGG-AFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111



 Score = 34.7 bits (78), Expect = 0.13
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           +D   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 VDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 56  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 101



 Score = 35.0 bits (79), Expect = 0.097
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 176 DPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 225

to top

>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 63  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 108



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 180 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 232

to top

>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 79  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 199 DPIYPGG-NFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTG 248

to top

>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 79  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 199 DPIYPGG-NFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 248

to top

>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 64  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 109



 Score = 35.0 bits (79), Expect = 0.097
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 184 DPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 233

to top

>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 64  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALG 109



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG   FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 183 LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTG 233

to top

>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = +1

Query: 259 PAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI 438
           P F        PS+L+G   GD+G+D  GL  DP      RE E+IH RWAM   LG   
Sbjct: 58  PKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLT 117

Query: 439 GQ--AYSGVPWFE 471
            +  A SGV + E
Sbjct: 118 PELLAKSGVKFGE 130



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 189 DPIYPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238

to top

>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 26/71 (36%), Positives = 38/71 (53%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  ++  F  +A    PS+L G  PGD+G+D  GL  DPA     R+ E+IH RW M  
Sbjct: 54  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLG 109

Query: 421 VLGIFIGQAYS 453
            LG    + ++
Sbjct: 110 ALGCVFPELFA 120



 Score = 35.0 bits (79), Expect = 0.097
 Identities = 21/59 (35%), Positives = 29/59 (49%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E I+P +  GS      FDPLGL  DP         E+ +GR AM ++ G F+    +G
Sbjct: 184 EVIDPLYPGGS------FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTG 236

to top

>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 65  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 183 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 450
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG          G  +
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTF 125

Query: 451 SGVPWFE 471
               WF+
Sbjct: 126 GEAVWFK 132



 Score = 35.8 bits (81), Expect = 0.057
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 LDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 65  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 183 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 112



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 184 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTG 236

to top

>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAY 450
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG          G  +
Sbjct: 38  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTF 97

Query: 451 SGVPWFE 471
               WF+
Sbjct: 98  GEAVWFK 104



 Score = 35.8 bits (81), Expect = 0.057
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 157 LDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 207

to top

>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 112



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 184 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236

to top

>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 67  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 67  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +   + +GR AM ++ G F+    +G
Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 67  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 289 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           +PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 67  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALG 111



 Score = 35.8 bits (81), Expect = 0.057
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 LDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALG 111



 Score = 35.8 bits (81), Expect = 0.057
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 LDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 21/59 (35%), Positives = 29/59 (49%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL  DP      +  EL  GR AM ++ G F+    +G
Sbjct: 183 EVVDPLYPGGS------FDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTG 235

to top

>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 LDPIYPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 67  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 112



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL + P      +  E+ +GR AM ++ G F+    +G
Sbjct: 184 EIVDPLYPGGS------FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236

to top

>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALG 111



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 331 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 195 FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236

to top

>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 65  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110

to top

>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 75  PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALG 120



 Score = 35.0 bits (79), Expect = 0.097
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 195 DPIYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 244

to top

>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 26/71 (36%), Positives = 37/71 (52%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  ++  F  +A    PS+L G  P D+G+D  GL  DP      RE E+IH RWAM  
Sbjct: 55  DRVKYLGPFSGEA----PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 110

Query: 421 VLGIFIGQAYS 453
            LG    + ++
Sbjct: 111 ALGCVFPELFA 121



 Score = 36.6 bits (83), Expect = 0.033
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E I+P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 EVIDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIF-------IGQAY 450
           PS+L G  PGD+G+D  GL   P      RE E+IH R AM+A LG         +GQ +
Sbjct: 70  PSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGF 129

Query: 451 SGVPWFE 471
               WF+
Sbjct: 130 GEAVWFK 136



 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFI 438
           D   PG F  D LGL +D       +  EL +GR AM ++ G F+
Sbjct: 190 DPLYPGSF--DSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFV 232

to top

>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH  WAM   LG
Sbjct: 7   PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALG 52



 Score = 35.0 bits (79), Expect = 0.097
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL  DP      +  EL +GR AM ++ G F+    +G
Sbjct: 127 DPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 176

to top

>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 26/63 (41%), Positives = 34/63 (53%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  ++  F  +A    PS+L G  PGD+G+D   L  DP      RE E+IH RWAM  
Sbjct: 55  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLG 110

Query: 421 VLG 429
            LG
Sbjct: 111 ALG 113



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 EVVDPLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D  GL  DP      RE E+IH RWA+A  LG
Sbjct: 65  PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLG 110



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +L GS      FDPLGLG DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 182 EVVDPLYLGGS------FDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234

to top

>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLG-KDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPW 465
           +G  PGD GFDPLGL   DP   +  +E EL HGR AM A  G    +A SG  W
Sbjct: 145 EGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSGDTW 199



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 331 FDPLGL--GKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAY 450
           FDP G   GKD   +   REAE  HGR AM A LG  + + +
Sbjct: 46  FDPAGFLKGKDKLEVYRLREAETTHGRVAMLASLGFVVQEKF 87

to top

>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
 Frame = +1

Query: 295 SWLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLG 429
           S+LDG LPGDFGFDPLGL  DP     F+  KW    E+I+GR+AM    G
Sbjct: 64  SYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAG 113



 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGV 459
           D + PG   F+PLG GKD   +K  +  E+ +GR AM A+LG FI    +GV
Sbjct: 197 DPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGV 248

to top

>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 22/46 (47%), Positives = 27/46 (58%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 429
           PS+L G  PGD+G+D   +  DP      RE E+IH RWAM   LG
Sbjct: 67  PSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALG 112



 Score = 37.4 bits (85), Expect = 0.019
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD  LPG   FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 186 LDPLLPGG-AFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236

to top

>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 23/53 (43%), Positives = 29/53 (54%)
 Frame = +1

Query: 274 DAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGI 432
           D +  +P    G  PGD+G+D  GL  DP   K YRE ELIH R  +   LG+
Sbjct: 67  DLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGM 119



 Score = 38.5 bits (88), Expect = 0.009
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PG+  FDPLGL  DP      +  E+ +GR AM A LG F+    +G
Sbjct: 194 LDPLYPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTG 244

to top

>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +1

Query: 292 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 471
           P+ L G  P D GFDPL +  DP      R +E+ H R +M A++G  + +      WFE
Sbjct: 169 PAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGKGAWFE 228

to top

>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2|
           (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP)
           (Fragment)
          Length = 150

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           LD   PGD  FDPLGL  DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 70  LDPLYPGD-AFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTG 120

to top

>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 21/51 (41%), Positives = 27/51 (52%)
 Frame = +1

Query: 304 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           D   PG   FDPLGL  DP  L   +  EL +GR AM ++ G F+    +G
Sbjct: 177 DPIYPGG-SFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTG 226



 Score = 35.0 bits (79), Expect = 0.097
 Identities = 22/63 (34%), Positives = 28/63 (44%)
 Frame = +1

Query: 241 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 420
           D+  ++  F  +A    PS+L G   G        L  DP      RE E+IH RWAM  
Sbjct: 52  DRVKYLGPFSGEA----PSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLG 99

Query: 421 VLG 429
            LG
Sbjct: 100 ALG 102

to top

>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 185 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

to top

>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)|
           (LHCP) (Fragment)
          Length = 116

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 34  EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 86

to top

>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 183 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 280 EFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           E ++P +  GS      FDPLGL +DP      +  E+ +GR AM ++ G F+    +G
Sbjct: 183 EVVDPLYPGGS------FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235

to top

>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast|
           precursor
          Length = 270

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +1

Query: 331 FDPLGLGKDPAF--LKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWF 468
           +DPL L        ++ +RE+E+ HGR AM A LG  +G+     P F
Sbjct: 74  WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQLEDFPAF 121



 Score = 33.1 bits (74), Expect = 0.37
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +1

Query: 319 GDFGFDPLGLG-KDPAFLKWYREAELIHGRWAMAAVLGIFIGQ-AYSGVPWFE 471
           G+  FDPLGL  +DP  L+  +  EL +GR AM A+ G  + + A  GV  F+
Sbjct: 181 GNLYFDPLGLKPEDPEELRELQTKELNNGRLAMIAIAGFVLQEVAEPGVEIFQ 233

to top

>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 127

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
 Frame = +1

Query: 316 PGDFG-----------FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 456
           PG FG           FDPLGL  DP      +  E+ +GR AM+ +LG +     +G
Sbjct: 35  PGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTG 92

to top

>POLN_HEVMY (Q04610) Non-structural polyprotein (EC 2.7.7.48) (RNA-directed RNA|
            polymerase/Helicase)
          Length = 1693

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 429  AQHRGHRPAPVDQLGLPVPLEERRVLAKPQGVEA 328
            A+  GHRP PV  +  P P  E+ +L  PQG+ A
Sbjct: 1246 AEELGHRPVPVAAVLPPCPELEQGLLYLPQGLTA 1279

to top

>NU3M_BRARE (Q9MIY3) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 393
           W+P   SD E ++P         + GFDPLG  + P  L+++  A L
Sbjct: 24  WLPQMNSDTEKLSPY--------ECGFDPLGSARLPFSLRFFLVAVL 62

to top

>PNKP_HUMAN (Q96T60) Bifunctional polynucleotide phosphatase/kinase|
           (Polynucleotide kinase-3'-phosphatase) (DNA
           5'-kinase/3'-phosphatase) [Includes: Polynucleotide
           3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase);
           Polynucleotide 5'-hydroxyl-kinase (
          Length = 521

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -1

Query: 393 QLGLPVPLEERRVLAKPQGVEAEVTGERAIEPGRVDELGIAFERGDPRLLVGG 235
           Q+ L    E R V  K  GV    TG + ++PG    LG+    GD   LV G
Sbjct: 50  QVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGV----GDTLYLVNG 98

to top

>NU3M_CYPCA (P24974) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 393
           W+P    DAE ++P         + GFDPLG  + P  L+++  A L
Sbjct: 24  WLPQMNPDAEKLSPY--------ECGFDPLGSARLPFSLRFFLVAIL 62

to top

>NU3M_CARAU (O78686) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 393
           W+P    DAE ++P         + GFDPLG  + P  L+++  A L
Sbjct: 24  WLPQMNPDAEKLSPY--------ECGFDPLGSARLPFSLRFFLVAIL 62

to top

>NU3M_ONCTS (P25707) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P    DAE ++P         + GFDPLG  + P  L+++
Sbjct: 24  WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57

to top

>NU3M_ONCNE (P20688) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P    DAE ++P         + GFDPLG  + P  L+++
Sbjct: 24  WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57

to top

>NU3M_ONCMY (P11629) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P    DAE ++P         + GFDPLG  + P  L+++
Sbjct: 24  WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57

to top

>NU3M_ONCMA (Q37108) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P    DAE ++P         + GFDPLG  + P  L+++
Sbjct: 24  WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57

to top

>NU3M_ONCKI (P20687) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P    DAE ++P         + GFDPLG  + P  L+++
Sbjct: 24  WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57

to top

>NU3M_ONCKE (Q35262) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P    DAE ++P         + GFDPLG  + P  L+++
Sbjct: 24  WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57

to top

>NU3M_ONCGO (P20686) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P    DAE ++P         + GFDPLG  + P  L+++
Sbjct: 24  WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57

to top

>AROC_TOXGO (O02607) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 536

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +1

Query: 301 LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGV 459
           + G + G     PLGLG +P F K   EAEL     ++ A  G  IGQ ++ V
Sbjct: 263 IGGCISGAIVRPPLGLG-EPCFDKV--EAELAKAMMSLPATKGFEIGQGFASV 312

to top

>RAGE_HUMAN (Q15109) Advanced glycosylation end product-specific receptor|
           precursor (Receptor for advanced glycosylation end
           products)
          Length = 404

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 426 QHRGHRPAPVD-QLGLPVPLEERRVLAKPQG 337
           +HR  R AP+  ++  PVPLEE +++ +P+G
Sbjct: 216 RHRALRTAPIQPRVWEPVPLEEVQLVVEPEG 246

to top

>NU3M_SCYCA (O79408) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P+ K D E ++P         + GFDPLG  + P  ++++
Sbjct: 24  WLPSLKPDNEKLSPY--------ECGFDPLGSARLPFSMRFF 57

to top

>NU3M_SALTR (O03252) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P    DAE ++P         + GFDPLG  + P  L+++
Sbjct: 24  WLPQITPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57

to top

>NU3M_SALSA (Q35929) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 378
           W+P    DAE ++P         + GFDPLG  + P  L+++
Sbjct: 24  WLPQMTPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57

to top

>NU3M_CROLA (P34192) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 3)
          Length = 116

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 253 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 393
           W+P    DAE ++P         + GFDPLG  + P  ++++  A L
Sbjct: 24  WLPQMNPDAEKLSPY--------ECGFDPLGSARLPFSIRFFLVAIL 62

to top

>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast|
           precursor (Fragment)
          Length = 211

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +1

Query: 301 LDGSLPGDF--GFDPLGLGKDPAFLKWY---REAELIHGRWAMAAVLGIFIGQAYSGVPW 465
           ++GS PGDF  G +P     D    +     R  EL +GR A   +LG+ + +  S  P+
Sbjct: 139 VEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPY 198


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,969,041
Number of Sequences: 219361
Number of extensions: 709473
Number of successful extensions: 2623
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 2492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2618
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result