ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet37a01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108268.1| Zea mays PCO078526 mRNA sequence Length = 1437 Score = 339 bits (171), Expect = 5e-90 Identities = 271/303 (89%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 191 tggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgcaga 250 |||||||||| |||||||| || ||||||| |||||||||||| ||| | |||||||||| Sbjct: 196 tggtgcggtgttccctccgtgagctccgcacccgcatcgactccgtcaggaacacgcaga 255 Query: 251 agatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggccg 310 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 256 agatcacggaggccatgaagctggtggccgccgccaaggtccggcgcgcgcaggaggccg 315 Query: 311 tggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaaccagg 370 | |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 316 tcgtctcctctcgccctttctcggaggcgctggtggaggtgctctacaacatgaaccagg 375 Query: 371 agatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgtcg 430 |||||||| ||||||||||||||||||||||||||||| ||| |||||||| || | Sbjct: 376 agatccagacggaggacatcgacctgcccctcacccgcacccgccccgtcaagaaggtgg 435 Query: 431 cgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttc-acaacaacgtgctca 489 | |||| ||||| ||||||||||| ||||| ||||| |||| ||||||||||||||| Sbjct: 436 ccctcgtggtcctgaccggcgagcgcggcctctgcgggagcttcaacaacaacgtgctca 495 Query: 490 aga 492 ||| Sbjct: 496 aga 498 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 95 cagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgcgcttgccagca 151 ||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||| Sbjct: 94 cagccatgtcgtgctcccacctctccaccgcctggtcctcctcggcgctcgccagca 150
>ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1469 Score = 327 bits (165), Expect = 2e-86 Identities = 271/305 (88%), Gaps = 1/305 (0%) Strand = Plus / Plus Query: 189 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 248 ||||||||||||||| || || || || || | |||||||||||| || ||||||||||| Sbjct: 145 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 204 Query: 249 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 308 |||||||||||||||||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 205 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 264 Query: 309 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 368 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 265 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 324 Query: 369 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 428 |||||||||| |||||||||||||||| |||||||||||| ||| |||||||| || Sbjct: 325 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 384 Query: 429 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttc-acaacaacgtgct 487 ||| |||||||||||||||||||||| ||||| |||||| |||| |||||||||| || Sbjct: 385 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 444 Query: 488 caaga 492 ||||| Sbjct: 445 caaga 449 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 93 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 140 |||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 43 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 90
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 327 bits (165), Expect = 2e-86 Identities = 271/305 (88%), Gaps = 1/305 (0%) Strand = Plus / Minus Query: 189 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 248 ||||||||||||||| || || || || || | |||||||||||| || ||||||||||| Sbjct: 19603736 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 19603677 Query: 249 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 308 |||||||||||||||||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 19603676 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 19603617 Query: 309 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 368 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19603616 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 19603557 Query: 369 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 428 |||||||||| |||||||||||||||| |||||||||||| ||| |||||||| || Sbjct: 19603556 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 19603497 Query: 429 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttc-acaacaacgtgct 487 ||| |||||||||||||||||||||| ||||| |||||| |||| |||||||||| || Sbjct: 19603496 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 19603437 Query: 488 caaga 492 ||||| Sbjct: 19603436 caaga 19603432 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 93 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 140 |||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 19603838 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 19603791
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 327 bits (165), Expect = 2e-86 Identities = 271/305 (88%), Gaps = 1/305 (0%) Strand = Plus / Minus Query: 189 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 248 ||||||||||||||| || || || || || | |||||||||||| || ||||||||||| Sbjct: 147080 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 147021 Query: 249 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 308 |||||||||||||||||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 147020 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 146961 Query: 309 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 368 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 146960 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 146901 Query: 369 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 428 |||||||||| |||||||||||||||| |||||||||||| ||| |||||||| || Sbjct: 146900 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 146841 Query: 429 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttc-acaacaacgtgct 487 ||| |||||||||||||||||||||| ||||| |||||| |||| |||||||||| || Sbjct: 146840 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 146781 Query: 488 caaga 492 ||||| Sbjct: 146780 caaga 146776 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 93 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 140 |||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 147182 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 147135
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 327 bits (165), Expect = 2e-86 Identities = 271/305 (88%), Gaps = 1/305 (0%) Strand = Plus / Minus Query: 189 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 248 ||||||||||||||| || || || || || | |||||||||||| || ||||||||||| Sbjct: 42386 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 42327 Query: 249 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 308 |||||||||||||||||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 42326 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 42267 Query: 309 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 368 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 42266 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 42207 Query: 369 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 428 |||||||||| |||||||||||||||| |||||||||||| ||| |||||||| || Sbjct: 42206 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 42147 Query: 429 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttc-acaacaacgtgct 487 ||| |||||||||||||||||||||| ||||| |||||| |||| |||||||||| || Sbjct: 42146 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 42087 Query: 488 caaga 492 ||||| Sbjct: 42086 caaga 42082 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 93 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 140 |||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 42488 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 42441
>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full insert sequence Length = 2822 Score = 327 bits (165), Expect = 2e-86 Identities = 271/305 (88%), Gaps = 1/305 (0%) Strand = Plus / Plus Query: 189 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 248 ||||||||||||||| || || || || || | |||||||||||| || ||||||||||| Sbjct: 1610 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 1669 Query: 249 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 308 |||||||||||||||||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 1670 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 1729 Query: 309 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 368 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1730 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 1789 Query: 369 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 428 |||||||||| |||||||||||||||| |||||||||||| ||| |||||||| || Sbjct: 1790 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 1849 Query: 429 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttc-acaacaacgtgct 487 ||| |||||||||||||||||||||| ||||| |||||| |||| |||||||||| || Sbjct: 1850 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 1909 Query: 488 caaga 492 ||||| Sbjct: 1910 caaga 1914 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 93 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 140 |||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1508 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 1555
>dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B21, full insert sequence Length = 1470 Score = 327 bits (165), Expect = 2e-86 Identities = 271/305 (88%), Gaps = 1/305 (0%) Strand = Plus / Plus Query: 189 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 248 ||||||||||||||| || || || || || | |||||||||||| || ||||||||||| Sbjct: 145 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 204 Query: 249 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 308 |||||||||||||||||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 205 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 264 Query: 309 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 368 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 265 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 324 Query: 369 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 428 |||||||||| |||||||||||||||| |||||||||||| ||| |||||||| || Sbjct: 325 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 384 Query: 429 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttc-acaacaacgtgct 487 ||| |||||||||||||||||||||| ||||| |||||| |||| |||||||||| || Sbjct: 385 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 444 Query: 488 caaga 492 ||||| Sbjct: 445 caaga 449 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 93 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 140 |||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 43 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 90
>dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F20, full insert sequence Length = 1482 Score = 319 bits (161), Expect = 5e-84 Identities = 270/305 (88%), Gaps = 1/305 (0%) Strand = Plus / Plus Query: 189 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 248 ||||||||||||||| || || || || || | |||||||||||| || ||||||||||| Sbjct: 250 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 309 Query: 249 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 308 |||||||||||||||||||| ||||||||| || |||||||| || || ||||||||||| Sbjct: 310 gaagatcacggaggcgatgaggctggtggcggcggccaaggtgcggcgggcgcaggaggc 369 Query: 309 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 368 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 370 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 429 Query: 369 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 428 |||||||||| |||||||||||||||| |||||||||||| ||| |||||||| || Sbjct: 430 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 489 Query: 429 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttc-acaacaacgtgct 487 ||| |||||||||||||||||||||| ||||| |||||| |||| |||||||||| || Sbjct: 490 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 549 Query: 488 caaga 492 ||||| Sbjct: 550 caaga 554 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 93 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 140 |||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 148 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 195
>gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma subunit mRNA, complete cds Length = 1772 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||| ||||||||||| || || |||||||||||||| ||||| |||||||| || || Sbjct: 171 aacacccagaagatcaccgatgccatgaagctggtggctgccgctaaggtccgccgtgct 230 Query: 301 caggaggccgtggtctcctcccgccccttctcggag 336 |||||||| ||||| | |||||||||||||||| Sbjct: 231 caggaggctgtggtgaacggccgccccttctcggag 266
>gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1) gamma subunit gene, complete CDS Length = 2913 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||| ||||||||||| || || |||||||||||||| ||||| |||||||| || || Sbjct: 256 aacacccagaagatcaccgatgccatgaagctggtggctgccgctaaggtccgccgtgct 315 Query: 301 caggaggccgtggtctcctcccgccccttctcggag 336 |||||||| ||||| | |||||||||||||||| Sbjct: 316 caggaggctgtggtgaacggccgccccttctcggag 351
>emb|X76131.1|SOATPCG S.oleracea (monatol) chloroplast ATP synthase gene gamma subunit Length = 5616 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||||||||||||||| || || |||||||| || |||||||| || ||||| || ||| Sbjct: 2213 aacacgcagaagatcaccgaagcaatgaagctcgtcgccgccgctaaagtccgccgtgcg 2272 Query: 301 caggaggccgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaac 360 || || ||||| || | |||||||||||||||| |||| || || || || |||||| Sbjct: 2273 caagaagccgtcgtaaacggccgccccttctcggagactctagtcgaagttctttacaac 2332 Query: 361 atgaa 365 ||||| Sbjct: 2333 atgaa 2337
>emb|Y00758.1|SOATPG Spinach plastid atpC mRNA for ATP synthase gamma-subunit Length = 1140 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||||||||||||||| || || |||||||| || |||||||| || ||||| || ||| Sbjct: 61 aacacgcagaagatcaccgaagcaatgaagctcgtcgccgccgctaaagtccgccgtgcg 120 Query: 301 caggaggccgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaac 360 || || ||||| || | |||||||||||||||| |||| || || || || |||||| Sbjct: 121 caagaagccgtcgtaaacggccgccccttctcggagactctagtcgaagttctttacaac 180 Query: 361 atgaa 365 ||||| Sbjct: 181 atgaa 185
>emb|X17257.1|SOATPC Spinach AtpC gene for chloroplast ATP synthase gamma-subunit Length = 3537 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||||||||||||||| || || |||||||| || |||||||| || ||||| || ||| Sbjct: 626 aacacgcagaagatcaccgaagcaatgaagctcgtcgccgccgctaaagtccgccgtgcg 685 Query: 301 caggaggccgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaac 360 || || ||||| || | |||||||||||||||| |||| || || || || |||||| Sbjct: 686 caagaagccgtcgtaaacggccgccccttctcggagactctagtcgaagttctttacaac 745 Query: 361 atgaa 365 ||||| Sbjct: 746 atgaa 750
>gb|DQ118640.1| Pavlova lutheri isolate 481 chloroplast ATP sythase gamma mRNA, complete cds; nuclear gene for chloroplast product Length = 2168 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 |||||| ||||||||||| |||||||||||| || || ||||||||||| || |||||| Sbjct: 170 aacacgaagaagatcacgtcggcgatgaagctcgtcgcggccgccaaggtgcgccgcgcg 229 Query: 301 cagga 305 ||||| Sbjct: 230 cagga 234
>emb|Z00018.1|RBATP R.blasticus atp operon coding for the 5 subunits of F1-ATPase and 8URFs Length = 12368 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||||| |||||||||| |||||||| || |||| ||||| || || | ||||||||| Sbjct: 7573 aacacgcggaagatcacgaaggcgatgcagatggtcgccgcggcgaaacttcgtcgcgcg 7632 Query: 301 cagga 305 ||||| Sbjct: 7633 cagga 7637
>gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP synthase gamma subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 900 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 277 gccgccgccaaggtccgtcgcgcgcaggaggcc 309 |||||||||||||| || ||||||||||||||| Sbjct: 188 gccgccgccaaggttcgccgcgcgcaggaggcc 220
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 244 acgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcag 303 |||||||||||||| |||| ||| || ||||||||||| ||||| | || ||||||||| Sbjct: 486700 acgcagaagatcaccaaggccatgcagatggtggccgcctccaagcttcgccgcgcgcag 486759
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 244 acgcagaagatcacggaggcgatgaagctggtggccgcc 282 |||||||||||||| |||||||| || ||||||||||| Sbjct: 197103 acgcagaagatcaccaaggcgatgcagatggtggccgcc 197065
>ref|XM_525566.1| PREDICTED: Pan troglodytes similar to smoothelin isoform b (LOC470182), mRNA Length = 1584 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 cacccgccgccgcgcctccaccggca 181 ||||||||||||| |||||||||||| Sbjct: 384 cacccgccgccgctcctccaccggca 409
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 cacccgccgccgcgcctccacc 177 |||||||||||||||||||||| Sbjct: 72492 cacccgccgccgcgcctccacc 72471
>ref|XM_653752.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1240.2), mRNA Length = 3348 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gcgcaggaggccgtggtctcct 319 |||||||||||||||||||||| Sbjct: 1380 gcgcaggaggccgtggtctcct 1359
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Minus Query: 244 acgcagaagatcacggaggcgatgaagctggtggccgc 281 |||||||||||||| ||||||||||| |||| ||||| Sbjct: 246917 acgcagaagatcaccaaggcgatgaagatggtcgccgc 246880
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 249 gaagatcacggaggcgatgaagctgg 274 |||||||||||| ||||||||||||| Sbjct: 2677233 gaagatcacggaagcgatgaagctgg 2677208
>emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plastid ATPase Length = 1327 Score = 44.1 bits (22), Expect = 0.43 Identities = 49/58 (84%) Strand = Plus / Plus Query: 248 agaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcagga 305 |||||||||| ||| |||||||| || || ||||||||||||||||| || ||||| Sbjct: 243 agaagatcaccatggccatgaagcttgtcgctgccgccaaggtccgtcgtgctcagga 300
>dbj|AK128627.1| Homo sapiens cDNA FLJ46786 fis, clone TRACH3028837, moderately similar to Smoothelin Length = 4954 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 cacccgccgccgcgcctccaccggca 181 ||||||||||||| |||||||||||| Sbjct: 3466 cacccgccgccgctcctccaccggca 3491
>dbj|AK095930.1| Homo sapiens cDNA FLJ38611 fis, clone HEART2005610, highly similar to Homo sapiens smoothelin large isoform L2 (SMTN) mRNA Length = 2938 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 cacccgccgccgcgcctccaccggca 181 ||||||||||||| |||||||||||| Sbjct: 360 cacccgccgccgctcctccaccggca 385
>dbj|AK092684.1| Homo sapiens cDNA FLJ35365 fis, clone SKMUS2000873, highly similar to Smoothelin large isoform L2 Length = 1736 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 cacccgccgccgcgcctccaccggca 181 ||||||||||||| |||||||||||| Sbjct: 474 cacccgccgccgctcctccaccggca 499
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 cacccgccgccgcgcctccacc 177 |||||||||||||||||||||| Sbjct: 4421129 cacccgccgccgcgcctccacc 4421108 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ccgccgccgcgcctccaccg 178 |||||||||||||||||||| Sbjct: 162292 ccgccgccgcgcctccaccg 162273
>gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22, complete sequence Length = 133893 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 cacccgccgccgcgcctccaccggca 181 ||||||||||||| |||||||||||| Sbjct: 84278 cacccgccgccgctcctccaccggca 84253
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 cacccgccgccgcgcctccacc 177 |||||||||||||||||||||| Sbjct: 4429823 cacccgccgccgcgcctccacc 4429802 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ccgccgccgcgcctccaccg 178 |||||||||||||||||||| Sbjct: 162292 ccgccgccgcgcctccaccg 162273
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||||| ||||||||| |||||||| || |||||||||| | ||| | || |||||| Sbjct: 120264 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 120323 Query: 301 cagga 305 ||||| Sbjct: 120324 cagga 120328
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.7 Identities = 54/65 (83%) Strand = Plus / Minus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||||| ||||||||| |||||||| || |||||||||| | ||| | || |||||| Sbjct: 185175 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 185116 Query: 301 cagga 305 ||||| Sbjct: 185115 cagga 185111
>gb|AF515783.1| Aplysia californica neurite outgrowth regulated kinase (Nork) mRNA, complete cds Length = 3126 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 gaggacatcgacctgcccctcaccc 406 |||||||||||| |||||||||||| Sbjct: 2782 gaggacatcgacgtgcccctcaccc 2806
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.7 Identities = 54/65 (83%) Strand = Plus / Minus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||||| ||||||||| |||||||| || |||||||||| | ||| | || |||||| Sbjct: 4036947 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 4036888 Query: 301 cagga 305 ||||| Sbjct: 4036887 cagga 4036883
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.7 Identities = 54/65 (83%) Strand = Plus / Minus Query: 244 acgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcag 303 |||||||||||||| |||||||||| |||| ||||| || ||| | || || |||||| Sbjct: 4103056 acgcagaagatcaccaaggcgatgaaaatggtcgccgcggcgaagcttcggcgtgcgcag 4102997 Query: 304 gaggc 308 ||||| Sbjct: 4102996 gaggc 4102992
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 244 acgcagaagatcacggaggcgatgaagctggtggccgccgccaag 288 |||||||||||||| |||||||| || |||| |||||| ||||| Sbjct: 300262 acgcagaagatcaccaaggcgatgcagatggtcgccgcctccaag 300218 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 cagcgcgccgtcaagcgcgtcgcg 432 |||||||||||| ||||||||||| Sbjct: 1421600 cagcgcgccgtcgagcgcgtcgcg 1421577
>gb|AC007448.14| Homo sapiens chromosome 17, clone RP11-401F2, complete sequence Length = 195558 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 ctcccacctctccaccgcgtg 128 ||||||||||||||||||||| Sbjct: 115856 ctcccacctctccaccgcgtg 115836
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 cctgcccctcacccgccagcgcgcc 417 |||||||| |||||||||||||||| Sbjct: 2248557 cctgccccgcacccgccagcgcgcc 2248533
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.7 Identities = 54/65 (83%) Strand = Plus / Minus Query: 241 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 300 ||||||| ||||||||| |||||||| || |||||||||| | ||| | || |||||| Sbjct: 3771921 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 3771862 Query: 301 cagga 305 ||||| Sbjct: 3771861 cagga 3771857
>ref|XM_550300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 acccgccgccgcgcctccaccggc 180 ||||||||||||||| |||||||| Sbjct: 680 acccgccgccgcgccgccaccggc 657
>ref|NM_191592.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 acccgccgccgcgcctccaccggc 180 ||||||||||||||| |||||||| Sbjct: 970 acccgccgccgcgccgccaccggc 947
>ref|XM_512476.1| PREDICTED: Pan troglodytes myosin IXB (LOC455820), mRNA Length = 3700 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gaagctggtggccgccgcca 286 |||||||||||||||||||| Sbjct: 2011 gaagctggtggccgccgcca 2030
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 cggcagcagcctggtggtgcggtg 200 |||||||||| ||||||||||||| Sbjct: 108746 cggcagcagcatggtggtgcggtg 108723
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 caccggcagcagcctggtggtgcg 197 |||||||||||||| ||||||||| Sbjct: 3381727 caccggcagcagcccggtggtgcg 3381704
>ref|NM_004145.2| Homo sapiens myosin IXB (MYO9B), mRNA Length = 7488 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gaagctggtggccgccgcca 286 |||||||||||||||||||| Sbjct: 3948 gaagctggtggccgccgcca 3967
>gb|DQ481115.1| Uncultured bacterium clone RT-250_16 membrane bound nitrate reductase (narG) gene, partial cds Length = 645 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 tgaagctggtggccgccgccaagg 289 |||| ||||||||||||||||||| Sbjct: 254 tgaaactggtggccgccgccaagg 277
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940128D9, complete sequence Length = 128585 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 gaagctggtggccgccgccaaggt 290 ||||||||||||||||| |||||| Sbjct: 100372 gaagctggtggccgccggcaaggt 100395
>gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208555 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cctctccaccgcgtggtcct 133 |||||||||||||||||||| Sbjct: 166784 cctctccaccgcgtggtcct 166803
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 cccgccgccgcgcctccaccggca 181 ||||||||||||||||| |||||| Sbjct: 92409 cccgccgccgcgcctcctccggca 92386
>gb|AY174086.1| Pisolithus sp. W48 SSR P9 sequence Length = 305 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tcgtcgtcctcaccggcgag 453 |||||||||||||||||||| Sbjct: 271 tcgtcgtcctcaccggcgag 252
>gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete sequence Length = 111262 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 277 gccgccgccaaggtccgtcgcgcgcaggaggccgtggtctcctcccgccccttctc 332 |||||||||| ||||||||||| || || ||||| || ||||||||||||||| Sbjct: 87541 gccgccgccagagtccgtcgcgcacaagaagccgttatcaactcccgccccttctc 87596
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 444 caccggcgagcgtggcctatgcggcgccttca 475 |||||||||||| ||||| | ||||||||||| Sbjct: 586812 caccggcgagcgcggcctgtccggcgccttca 586781
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 444 caccggcgagcgtggcctatgcggcgccttca 475 |||||||||||||||||| | |||||| |||| Sbjct: 631869 caccggcgagcgtggcctgtccggcgcgttca 631900
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcagcagcctggtggtgcgg 198 |||||||||||||||||||| Sbjct: 39950 gcagcagcctggtggtgcgg 39931
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcagcagcctggtggtgcgg 198 |||||||||||||||||||| Sbjct: 303828 gcagcagcctggtggtgcgg 303809
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcagcagcctggtggtgcgg 198 |||||||||||||||||||| Sbjct: 274890 gcagcagcctggtggtgcgg 274871
>gb|AC020913.9| Homo sapiens chromosome 19 clone CTD-3032J10, complete sequence Length = 117751 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gaagctggtggccgccgcca 286 |||||||||||||||||||| Sbjct: 92366 gaagctggtggccgccgcca 92385
>gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete sequence Length = 137284 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 277 gccgccgccaaggtccgtcgcgcgcaggaggccgtggtctcctcccgccccttctc 332 |||||||||| ||||||||||| || || ||||| || ||||||||||||||| Sbjct: 77876 gccgccgccagagtccgtcgcgcacaagaagccgttatcaactcccgccccttctc 77931
>gb|AF124816.1|AF124816 Mentha x piperita cytochrome p450 isoform PM17 mRNA, complete cds Length = 1503 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggaggcgatgaagctggtgg 277 |||||||||||||||||||| Sbjct: 270 ggaggcgatgaagctggtgg 289
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ccgccgccgcgcctccaccg 178 |||||||||||||||||||| Sbjct: 155913 ccgccgccgcgcctccaccg 155894
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 acccgccgccgcgcctccaccggc 180 ||||||||||||||| |||||||| Sbjct: 3835130 acccgccgccgcgccgccaccggc 3835153
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gtccgcaacacgcagaagatcacg 258 ||||||||||| |||||||||||| Sbjct: 8433 gtccgcaacacccagaagatcacg 8456
>dbj|AB209997.1| Homo sapiens mRNA for MYO9B variant protein, partial cds, clone: ef05385 Length = 7607 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gaagctggtggccgccgcca 286 |||||||||||||||||||| Sbjct: 4095 gaagctggtggccgccgcca 4114
>gb|AC157095.9| Mus musculus 6 BAC RP24-350P11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177800 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cctctccaccgcgtggtcct 133 |||||||||||||||||||| Sbjct: 175229 cctctccaccgcgtggtcct 175210
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 gccgcgcctccaccggcagcagcc 187 ||||||||||||||||||| |||| Sbjct: 4558276 gccgcgcctccaccggcaggagcc 4558299
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 444 caccggcgagcgtggcctatgcggcgccttca 475 |||||||||||| ||||| | ||||||||||| Sbjct: 475979 caccggcgagcgcggcctgtccggcgccttca 475948
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 tggccgccgccaaggtccgt 294 |||||||||||||||||||| Sbjct: 3031382 tggccgccgccaaggtccgt 3031401 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cctgcccctcacccgccagc 412 |||||||||||||||||||| Sbjct: 1698231 cctgcccctcacccgccagc 1698212
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 acccgccgccgcgcctccaccggc 180 ||||||||||||||| |||||||| Sbjct: 108672 acccgccgccgcgccgccaccggc 108695
>dbj|AK101660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057J01, full insert sequence Length = 1975 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 acccgccgccgcgcctccaccggc 180 ||||||||||||||| |||||||| Sbjct: 974 acccgccgccgcgccgccaccggc 951
>dbj|AK073313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027F03, full insert sequence Length = 1389 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 acccgccgccgcgcctccaccggc 180 ||||||||||||||| |||||||| Sbjct: 680 acccgccgccgcgccgccaccggc 657
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 agcacttccacccgccgccg 167 |||||||||||||||||||| Sbjct: 1385501 agcacttccacccgccgccg 1385520
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 agcgcgccgtcaagcgcgtc 429 |||||||||||||||||||| Sbjct: 2975079 agcgcgccgtcaagcgcgtc 2975098 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 cccgccagcgcgccgtcaagcgcg 427 ||||||||||||||| |||||||| Sbjct: 2608830 cccgccagcgcgccggcaagcgcg 2608853
>dbj|AK062282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C06, full insert sequence Length = 1677 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 acccgccgccgcgcctccaccggc 180 ||||||||||||||| |||||||| Sbjct: 970 acccgccgccgcgccgccaccggc 947
>gb|U42391.1|HSU42391 Human myosin-IXb mRNA, complete cds Length = 6069 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gaagctggtggccgccgcca 286 |||||||||||||||||||| Sbjct: 3948 gaagctggtggccgccgcca 3967
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ccgccgccgcgcctccaccg 178 |||||||||||||||||||| Sbjct: 155913 ccgccgccgcgcctccaccg 155894
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccgccgccgcgcctccaccg 178 |||||||||||||||||||| Sbjct: 142701 ccgccgccgcgcctccaccg 142720
>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161808 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ccgccgccgcgcctccaccg 178 |||||||||||||||||||| Sbjct: 107522 ccgccgccgcgcctccaccg 107503 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,711,162 Number of Sequences: 3902068 Number of extensions: 2711162 Number of successful extensions: 61957 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 59360 Number of HSP's gapped (non-prelim): 2591 length of query: 496 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 474 effective length of database: 17,147,199,772 effective search space: 8127772691928 effective search space used: 8127772691928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
