>POLS_RRV2 (P17517) Structural polyprotein [Contains: E2 envelope|
           glycoprotein] (Fragment)
          Length = 422

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 107 GNSAMVVTMLLSLCVLTFIKARYCSTPYPNKPAPLLDLEAGI 232
           G S M +  L + C +     R C TPY   P  ++ L  G+
Sbjct: 372 GXSLMALLTLAATCCMLATARRKCLTPYALTPGAVVPLTLGL 413


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.130    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,046,433
Number of Sequences: 219361
Number of extensions: 233315
Number of successful extensions: 741
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)