ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet35a11 |
|---|---|
| Clone Library Name | barley_pub |
>LCAT_PAPAN (Q08758) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) Length = 440 Score = 37.0 bits (84), Expect = 0.022 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 7/128 (5%) Frame = +3 Query: 27 QWLPRLLLLV---HSTFFLVSHTVALPLPWTLDHA---SGLHPVVLLPGSSCSQIEVRLT 188 QW+P LL L+ + F+L++ V P P T A + PV+L+PG +Q+E +L Sbjct: 9 QWVPLLLGLLLPPAAPFWLLN--VLFP-PHTTPKAELSNHTRPVILVPGCLGNQLEAKL- 64 Query: 189 DDYEPPSALCAAHKGDGRWHRLWKNXXXXXXXXXXX-XXQIRLVYDDAAGDYRNAPGVET 365 D + + +C D + +W + R+VY+ ++G NAPGV+ Sbjct: 65 DKPDVVNWMCYRKTED--FFTIWLDLNMFLPLGVDCWIDNTRVVYNRSSGLVSNAPGVQI 122 Query: 366 RALSFGST 389 R FG T Sbjct: 123 RVPGFGKT 130
>LCAT_RAT (P18424) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) Length = 440 Score = 34.3 bits (77), Expect = 0.14 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 4/125 (3%) Frame = +3 Query: 27 QWLPRLL--LLVHSTFFLVSHTVALPLPWTLDHASG-LHPVVLLPGSSCSQIEVRLTDDY 197 QW+ LL LL +T F + + + P S PV+L+PG +++E +L D Sbjct: 9 QWVLLLLGLLLPPATSFWLLNVLFPPHTTPKAELSNHTRPVILVPGCMGNRLEAKL-DKP 67 Query: 198 EPPSALCAAHKGDGRWHRLWKNXXXXXXXXXXX-XXQIRLVYDDAAGDYRNAPGVETRAL 374 + LC D + +W + R+VY+ ++G NAPGV+ R Sbjct: 68 NVVNWLCYRKTED--FFTIWLDFNMFLPLGVDCWIDNTRVVYNRSSGHMSNAPGVQIRVP 125 Query: 375 SFGST 389 FG T Sbjct: 126 GFGKT 130
>LCAT_HUMAN (P04180) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) Length = 440 Score = 33.9 bits (76), Expect = 0.19 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Frame = +3 Query: 135 PVVLLPGSSCSQIEVRLTDDYEPPSALCAAHKGDGRWHRLWKNXXXXXXXXXXX-XXQIR 311 PV+L+PG +Q+E +L D + + +C D + +W + R Sbjct: 48 PVILVPGCLGNQLEAKL-DKPDVVNWMCYRKTED--FFTIWLDLNMFLPLGVDCWIDNTR 104 Query: 312 LVYDDAAGDYRNAPGVETRALSFGST 389 +VY+ ++G NAPGV+ R FG T Sbjct: 105 VVYNRSSGLVSNAPGVQIRVPGFGKT 130
>LCAT_MOUSE (P16301) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) Length = 438 Score = 33.9 bits (76), Expect = 0.19 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Frame = +3 Query: 135 PVVLLPGSSCSQIEVRLTDDYEPPSALCAAHKGDGRWHRLWKNXXXXXXXXXXX-XXQIR 311 PV+L+PG +++E +L D + + +C D + +W + R Sbjct: 48 PVILVPGCLGNRLEAKL-DKPDVVNWMCYRKTED--FFTIWLDFNLFLPLGVDCWIDNTR 104 Query: 312 LVYDDAAGDYRNAPGVETRALSFGST 389 +VY+ ++G NAPGV+ R FG T Sbjct: 105 IVYNHSSGRVSNAPGVQIRVPGFGKT 130
>LCAT_TATKG (O35840) Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43)| (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) (Fragment) Length = 293 Score = 31.6 bits (70), Expect = 0.93 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 309 RLVYDDAAGDYRNAPGVETRALSFGST 389 R+VY+ ++G NAPGVE R FG T Sbjct: 22 RVVYNRSSGRVSNAPGVEIRVPGFGKT 48
>LYPA3_MOUSE (Q8VEB4) 1-O-acylceramide synthase precursor (EC 2.3.1.-) (ACS)| (Lysosomal phospholipase A2) (Lysophospholipase 3) (LCAT-like lysophospholipase) (LLPL) Length = 412 Score = 31.2 bits (69), Expect = 1.2 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Frame = +3 Query: 135 PVVLLPGSSCSQIEVRLTDDYEPPSALCAAHKGDGRWHRLWKNXXXXX-XXXXXXXXQIR 311 PVVL+PG +Q+E +L D + LC+ K + LW N IR Sbjct: 39 PVVLVPGDLGNQLEAKL-DKPKVVHYLCS--KKTDSYFTLWLNLELLLPVIIDCWIDNIR 95 Query: 312 LVYDDAAGDYRNAPGVETRALSFGST 389 LVY+ + + GV+ R FG T Sbjct: 96 LVYNRTSRATQFPDGVDVRVPGFGET 121
>LCAT_CHICK (P53760) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) (Fragment) Length = 413 Score = 30.8 bits (68), Expect = 1.6 Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 4/123 (3%) Frame = +3 Query: 33 LPRLLLLVHSTFFLVSHTVALPLPWTLDHA---SGLHPVVLLPGSSCSQIEVRLTDDYEP 203 L LLLL T V P P T A + P L+PG +Q+E +L D + Sbjct: 10 LTLLLLLPQPTSQFWLFNVLFP-PTTTPEAPPTNSTPPWCLVPGFLGNQLEAKL-DKPDV 67 Query: 204 PSALCAAHKGDGRWHRLWKNXXXXXXXXXXX-XXQIRLVYDDAAGDYRNAPGVETRALSF 380 + +C D + +W N R+VY+ A NAPGV R F Sbjct: 68 VNWMCYRKTED--YFTIWLNLNTFLPVGVDCWIDNTRVVYNRTARKMTNAPGVHIRVPGF 125 Query: 381 GST 389 G T Sbjct: 126 GKT 128
>LCAT_MICMN (O35724) Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43)| (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) (Fragment) Length = 299 Score = 30.4 bits (67), Expect = 2.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +3 Query: 309 RLVYDDAAGDYRNAPGVETRALSFGST 389 R+VY+ ++G NAPGV+ R FG T Sbjct: 24 RVVYNRSSGRMSNAPGVQIRVPGFGKT 50
>LYPA3_HUMAN (Q8NCC3) 1-O-acylceramide synthase precursor (EC 2.3.1.-) (ACS)| (Lysosomal phospholipase A2) (Lysophospholipase 3) (LPLA2) (LCAT-like lysophospholipase) (LLPL) Length = 412 Score = 30.0 bits (66), Expect = 2.7 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Frame = +3 Query: 123 SGLHP-VVLLPGSSCSQIEVRLTDDYEPPSALCAAHKGDGRWHRLWKNXXXXX-XXXXXX 296 +G HP VVL+PG +Q+E +L +P K + +W N Sbjct: 34 AGRHPPVVLVPGDLGNQLEAKLD---KPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCW 90 Query: 297 XXQIRLVYDDAAGDYRNAPGVETRALSFGST 389 IRLVY+ + + GV+ R FG T Sbjct: 91 IDNIRLVYNKTSRATQFPDGVDVRVPGFGKT 121
>LCAT_ELIQU (O35573) Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43)| (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) (Fragment) Length = 299 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 309 RLVYDDAAGDYRNAPGVETRALSFGST 389 R++Y+ ++G NAPGV+ R FG T Sbjct: 26 RVIYNRSSGYMSNAPGVQIRVPGFGKT 52
>NADB_CAUCR (Q9A4C3) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 511 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +1 Query: 247 TGYGRTPLLLTPTPCASLIRSAWS 318 TG +T L+L+PTP AS SAW+ Sbjct: 29 TGAAKTALVLSPTPLASGCSSAWA 52
>LEU3_CORJK (Q4JUQ0) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 338 Score = 29.3 bits (64), Expect = 4.6 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = +3 Query: 93 LPLPWTLDHASGLHPVVLLPGSS 161 LPL + LDHA L P L PGSS Sbjct: 85 LPLRFKLDHAVNLRPSKLYPGSS 107
>Y4IO_RHISN (P55498) Hypothetical protein y4iO| Length = 252 Score = 29.3 bits (64), Expect = 4.6 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = -1 Query: 172 IWLQELPGSSTTGWRPEAWSRVHGNGK--ATVWLTRK 68 +WL+ PGS+ T W E S G GK A V L RK Sbjct: 193 LWLRHQPGSALTRWFYERISHSGGRGKKVAIVALARK 229
>YMCR_STRLA (P43458) Putative HTH-type transcriptional regulator in mcrB| 3'region Length = 281 Score = 29.3 bits (64), Expect = 4.6 Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 5/34 (14%) Frame = +2 Query: 65 LLPGQPHRRLAVAVDSRPRLRPPP-----CGAAA 151 L PG RRL VD R RPPP CG AA Sbjct: 145 LWPGAGTRRLTERVDGGGRTRPPPSRIWHCGVAA 178
>SIG13_PANTR (Q64JA4) Sialic acid-binding Ig-like lectin 13 precursor| (Siglec-13) Length = 387 Score = 28.9 bits (63), Expect = 6.0 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +3 Query: 84 TVALPLPWTLDHASGLHPVVLLPGSSCSQIE-VRLTDDYEPPSALCAAHKGDG 239 +V +P DH S L V LPG+ + VRL Y P + +GDG Sbjct: 194 SVVTLIPQPQDHGSRLTCQVTLPGAGVTTTRTVRLNVSYPPQNLTLTVFQGDG 246
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 28.9 bits (63), Expect = 6.0 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +2 Query: 71 PGQPHRRLAVAVDSRPRLRPPPCGAAAGQLLQPDRGPP 184 P P R +V +SRP+ RP PC G D+ PP Sbjct: 545 PPPPDRPYSVGAESRPQRRPLPC--TPGDCPSRDKLPP 580
>LCAT_RABIT (P53761) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) Length = 440 Score = 28.5 bits (62), Expect = 7.9 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Frame = +3 Query: 135 PVVLLPGSSCSQIEVRLTDDYEPPSALCAAHKGDGRWHRLWKNXXXXXXXXXXX-XXQIR 311 PV+L+PG +Q+E +L +P ++ + +W + R Sbjct: 48 PVILVPGCLGNQLEAKLD---KPSVVNWMCYRKTEDFFTIWLDLNMFLPLGVDCWIDNTR 104 Query: 312 LVYDDAAGDYRNAPGVETRALSFGST 389 +VY+ ++G +PGV+ R FG T Sbjct: 105 VVYNRSSGRVVISPGVQIRVPGFGKT 130 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,944,998 Number of Sequences: 219361 Number of extensions: 751993 Number of successful extensions: 2427 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2362 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2420 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
