>ref|XM_844515.1| PREDICTED: Canis familiaris similar to Nucleolar autoantigen No55
           (LOC607731), mRNA
          Length = 1738

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 225 ctgctgggcagcgccgcggcg 245
           |||||||||||||||||||||
Sbjct: 34  ctgctgggcagcgccgcggcg 54

>gb|AC009374.7| Drosophila melanogaster 3L BAC RP98-4J11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 164719

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 69     cttgttctccagcttctcctcctgt 93
              ||||||||||||||||| |||||||
Sbjct: 132141 cttgttctccagcttctgctcctgt 132165

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 235     gcgccgcggcggacgacgccg 255
               |||||||||||||||||||||
Sbjct: 1095037 gcgccgcggcggacgacgccg 1095017



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gggcagcgccgcggcggacg 249
              ||||||||||||||||||||
Sbjct: 834584 gggcagcgccgcggcggacg 834603

>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete
              sequence
          Length = 425677

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 69     cttgttctccagcttctcctcctgt 93
              ||||||||||||||||| |||||||
Sbjct: 137042 cttgttctccagcttctgctcctgt 137018

>gb|AY623103.1| Nonomuraea sp. ATCC 39727 rifampicin-sensitive RNA polymerase beta
            chain (rpoB) gene, rpoB-S allele, complete cds
          Length = 3758

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gccgcgaggagggcgacgagc 128
            |||||||||||||||||||||
Sbjct: 2501 gccgcgaggagggcgacgagc 2521

>ref|NM_203293.1| Homo sapiens tripartite motif-containing 7 (TRIM7), transcript
            variant 1, mRNA
          Length = 2862

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctacttgttctccagcttct 85
            ||||||||||||||||||||
Sbjct: 2722 ctacttgttctccagcttct 2741

>ref|NM_203295.1| Homo sapiens tripartite motif-containing 7 (TRIM7), transcript
            variant 4, mRNA
          Length = 2660

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctacttgttctccagcttct 85
            ||||||||||||||||||||
Sbjct: 2520 ctacttgttctccagcttct 2539

>ref|NM_203294.1| Homo sapiens tripartite motif-containing 7 (TRIM7), transcript
            variant 5, mRNA
          Length = 2592

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctacttgttctccagcttct 85
            ||||||||||||||||||||
Sbjct: 2452 ctacttgttctccagcttct 2471

>ref|NM_203297.1| Homo sapiens tripartite motif-containing 7 (TRIM7), transcript
            variant 2, mRNA
          Length = 3026

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctacttgttctccagcttct 85
            ||||||||||||||||||||
Sbjct: 2886 ctacttgttctccagcttct 2905

>ref|NM_203296.1| Homo sapiens tripartite motif-containing 7 (TRIM7), transcript
            variant 3, mRNA
          Length = 2869

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctacttgttctccagcttct 85
            ||||||||||||||||||||
Sbjct: 2729 ctacttgttctccagcttct 2748

>ref|XM_951394.1| Neurospora crassa OR74A hypothetical protein (NCU01809.1) partial
            mRNA
          Length = 2655

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 181  acgccctgctcaaaaaggcgcgcc 204
            ||||||||||| ||||||||||||
Sbjct: 1343 acgccctgctcgaaaaggcgcgcc 1366

>ref|XM_328247.1| Neurospora crassa OR74A hypothetical protein (NCU01809.1) partial
            mRNA
          Length = 2655

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 181  acgccctgctcaaaaaggcgcgcc 204
            ||||||||||| ||||||||||||
Sbjct: 1343 acgccctgctcgaaaaggcgcgcc 1366

>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OJ1057_C01, complete sequence
          Length = 142752

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   cgccgtcgcaaccgcaacac 220
             ||||||||||||||||||||
Sbjct: 85387 cgccgtcgcaaccgcaacac 85368

>gb|AE009374.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 144 of
            187 of the complete sequence
          Length = 11164

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 234  agcgccgcggcggacgacgccggc 257
            ||||||| ||||||||||||||||
Sbjct: 4115 agcgccggggcggacgacgccggc 4092

>gb|AE008240.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 44 of
            187 of the complete sequence
          Length = 14945

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 234  agcgccgcggcggacgacgccggc 257
            ||||||| ||||||||||||||||
Sbjct: 7938 agcgccggggcggacgacgccggc 7961

>gb|BC116552.1| Danio rerio cytochrome P450, family 51, mRNA (cDNA clone MGC:136479
           IMAGE:8127152), complete cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 223 acctgctgggcagcgccgcggcgg 246
           ||||||||||||||| ||||||||
Sbjct: 387 acctgctgggcagcgacgcggcgg 410

>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     gcagtgcgttggccgtcacc 53
              ||||||||||||||||||||
Sbjct: 447489 gcagtgcgttggccgtcacc 447508

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 283     tcggcgccacggaggcgcagccga 306
               |||||||||||| |||||||||||
Sbjct: 5764045 tcggcgccacggtggcgcagccga 5764022

>gb|AY496939.1| Danio rerio 14-alpha demethylase (CYP51) mRNA, complete cds
          Length = 1500

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 223 acctgctgggcagcgccgcggcgg 246
           ||||||||||||||| ||||||||
Sbjct: 296 acctgctgggcagcgacgcggcgg 319

>emb|AJ133131.3|MXA133131 Myxococcus xanthus phoR1 gene, pph2 gene and sixA gene
          Length = 5508

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  cgaggagggcgacgagcgtc 131
            ||||||||||||||||||||
Sbjct: 1023 cgaggagggcgacgagcgtc 1004

>emb|Z23163.1|CFFARPA1A C.fasciculata CfaRPA1 gene, complete CDS
          Length = 1643

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 231 ggcagcgccgcggcggacga 250
           ||||||||||||||||||||
Sbjct: 418 ggcagcgccgcggcggacga 399

>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  ccgcgaggagggcgacgagc 128
            ||||||||||||||||||||
Sbjct: 2630 ccgcgaggagggcgacgagc 2649

>emb|AL669998.1|NCB1K11 Neurospora crassa DNA linkage group II BAC clone B1K11
          Length = 88013

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 181  acgccctgctcaaaaaggcgcgcc 204
            ||||||||||| ||||||||||||
Sbjct: 3174 acgccctgctcgaaaaggcgcgcc 3197

>dbj|AK124617.1| Homo sapiens cDNA FLJ42626 fis, clone BRACE3017083
          Length = 4356

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctacttgttctccagcttct 85
            ||||||||||||||||||||
Sbjct: 4239 ctacttgttctccagcttct 4258

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 201      cgccgtcgcaaccgcaacac 220
                ||||||||||||||||||||
Sbjct: 13401924 cgccgtcgcaaccgcaacac 13401905

>gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2 clone RP23-43C3, complete
             sequence
          Length = 188989

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    ctccagcttctcctcctgtc 94
             ||||||||||||||||||||
Sbjct: 46404 ctccagcttctcctcctgtc 46423

>gb|AC008443.10| Homo sapiens chromosome 5 clone CTC-338M12, complete sequence
          Length = 120515

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ctacttgttctccagcttct 85
             ||||||||||||||||||||
Sbjct: 14586 ctacttgttctccagcttct 14567

>ref|NM_001001730.1| Danio rerio cytochrome P450, family 51 (cyp51), mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 223 acctgctgggcagcgccgcggcgg 246
           ||||||||||||||| ||||||||
Sbjct: 296 acctgctgggcagcgacgcggcgg 319

>ref|XM_311690.2| Anopheles gambiae str. PEST ENSANGP00000014916
           (ENSANGG00000012427), partial mRNA
          Length = 1992

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 ccgcaacacggacctgctgg 231
           ||||||||||||||||||||
Sbjct: 687 ccgcaacacggacctgctgg 706

>gb|AC153618.4| Mus musculus 6 BAC RP23-5O1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204946

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     ttctccagcttctcctcctg 92
              ||||||||||||||||||||
Sbjct: 125566 ttctccagcttctcctcctg 125585

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    gcagcgccgcggcggacgac 251
              ||||||||||||||||||||
Sbjct: 492008 gcagcgccgcggcggacgac 491989

>emb|AL845368.6| Mouse DNA sequence from clone RP23-206D14 on chromosome 2, complete
             sequence
          Length = 159056

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ctccagcttctcctcctgtc 94
             ||||||||||||||||||||
Sbjct: 33259 ctccagcttctcctcctgtc 33240

>emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on chromosome X, complete
             sequence
          Length = 196568

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    ttctccagcttctcctcctgtcgc 96
             ||||||| ||||||||||||||||
Sbjct: 89535 ttctccatcttctcctcctgtcgc 89512


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,069,549
Number of Sequences: 3902068
Number of extensions: 2069549
Number of successful extensions: 53344
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52958
Number of HSP's gapped (non-prelim): 386
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)