ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet34g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX470195.10| Mouse DNA sequence from clone RP23-4K22 on chro... 46 0.097
2gb|AC107851.17| Mus musculus chromosome 9, clone RP23-451B4, com... 44 0.38
3gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 44 0.38
4gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 44 0.38
5gb|AC137529.3| Carollia perspicillata clone 6M17, complete sequence 44 0.38
6gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 44 0.38
7emb|AL672273.9| Mouse DNA sequence from clone RP23-15A12 on chro... 44 0.38
8gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 1.5
9ref|XM_600663.2| PREDICTED: Bos taurus similar to nestin (LOC522... 42 1.5
10emb|X70948.1|TC1602 T.cruzi FL-160-2 gene 42 1.5
11gb|AC155949.8| Mus musculus 6 BAC RP24-407P20 (Roswell Park Canc... 42 1.5
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
13ref|XM_343188.2| PREDICTED: Rattus norvegicus similar to RNA pol... 42 1.5
14dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AB257750.1| Bos taurus mRNA for nestin, partial cds 42 1.5
16ref|NM_104958.2| Arabidopsis thaliana ASP4 (ASPARTATE AMINOTRANS... 40 6.0
17ref|NM_179507.1| Arabidopsis thaliana ASP4 (ASPARTATE AMINOTRANS... 40 6.0
18gb|AC098644.4| Takifugu rubripes clone 205P11, complete sequence 40 6.0
19gb|AC151667.1| Pan troglodytes chromosome X clone RP43-007H19 ma... 40 6.0
20gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, co... 40 6.0
21gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.0
22gb|AC144860.2| Mus musculus BAC clone RP24-133K9 from chromosome... 40 6.0
23gb|AC126437.3| Mus musculus BAC clone RP24-211B22 from chromosom... 40 6.0
24gb|AC161206.10| Mus musculus chromosome 15, clone RP24-299A13, c... 40 6.0
25gb|AC079987.5| Homo sapiens BAC clone RP11-655J18 from 7, comple... 40 6.0
26gb|AC121858.3| Mus musculus BAC clone RP24-104B23 from chromosom... 40 6.0
27gb|AC132264.3| Mus musculus BAC clone RP24-371N18 from chromosom... 40 6.0
28emb|AL390776.16| Human DNA sequence from clone RP11-182I23 on ch... 40 6.0
29emb|AL078603.4|HSJ364H10 Human DNA sequence from clone RP3-364H1... 40 6.0
30emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.0
31emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 40 6.0
32emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 40 6.0
33gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, comp... 40 6.0
34dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.0
35gb|AC107222.6| Homo sapiens BAC clone RP11-616K6 from 4, complet... 40 6.0
36gb|AC160108.2| Mus musculus BAC clone RP24-155K11 from chromosom... 40 6.0
37gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.0
38gb|AC091633.22| Homo sapiens 3 BAC RP11-506F8 (Roswell Park Canc... 40 6.0
39gb|AC069213.22| Homo sapiens 3 BAC RP11-338O10 (Roswell Park Can... 40 6.0
40gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, comple... 40 6.0
41gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana... 40 6.0
42gb|AC005043.2|AC005043 Homo sapiens BAC clone RP11-576N21 from 1... 40 6.0
43gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, ... 40 6.0
44dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.0
45gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence 40 6.0
46gb|AC147917.2| Xenopus tropicalis clone CH216-8L20, complete seq... 40 6.0
47gb|AC104225.18| Mus musculus chromosome 15, clone RP23-74H8, com... 40 6.0
48gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.0
49gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 6.0
50gb|U15035.1|ATU15035 Arabidopsis thaliana aspartate aminotransfe... 40 6.0
51emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chr... 40 6.0 
>emb|BX470195.10| Mouse DNA sequence from clone RP23-4K22 on chromosome X, complete
            sequence
          Length = 213684

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 21   tcccctactcccctctcctctcc 43
            |||||||||||||||||||||||
Sbjct: 6027 tcccctactcccctctcctctcc 6049
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>gb|AC107851.17| Mus musculus chromosome 9, clone RP23-451B4, complete sequence
          Length = 190253

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 21    tcccctactcccctctcctctccttt 46
             |||||| |||||||||||||||||||
Sbjct: 98562 tcccctcctcccctctcctctccttt 98537
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 51     ctcgctcgccgcctcgggatcc 72
              ||||||||||||||||||||||
Sbjct: 130316 ctcgctcgccgcctcgggatcc 130295
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>gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough plasmid pDV,
             complete sequence
          Length = 202301

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 378   gcggcaggctgctgctggccct 399
             ||||||||||||||||||||||
Sbjct: 83156 gcggcaggctgctgctggccct 83177
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>gb|AC137529.3| Carollia perspicillata clone 6M17, complete sequence
          Length = 118381

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 21    tcccctactcccctctcctctc 42
             ||||||||||||||||||||||
Sbjct: 10704 tcccctactcccctctcctctc 10683
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 21     tcccctactcccctctcctctc 42
              ||||||||||||||||||||||
Sbjct: 458356 tcccctactcccctctcctctc 458335
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>emb|AL672273.9| Mouse DNA sequence from clone RP23-15A12 on chromosome 2, complete
              sequence
          Length = 202965

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 21     tcccctactcccctctcctctccttt 46
              |||||| |||||||||||||||||||
Sbjct: 193358 tcccctcctcccctctcctctccttt 193333
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 71      cccccggcgcggcgcagcagc 91
               |||||||||||||||||||||
Sbjct: 3179333 cccccggcgcggcgcagcagc 3179353
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>ref|XM_600663.2| PREDICTED: Bos taurus similar to nestin (LOC522383), mRNA
          Length = 5383

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 23   ccctactcccctctcctctcctttg 47
            |||||||||||||||||| ||||||
Sbjct: 1056 ccctactcccctctcctcacctttg 1080
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>emb|X70948.1|TC1602 T.cruzi FL-160-2 gene
          Length = 3281

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 341  ttgcgaagaagtaccgctgcg 361
            |||||||||||||||||||||
Sbjct: 1505 ttgcgaagaagtaccgctgcg 1525
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>gb|AC155949.8| Mus musculus 6 BAC RP24-407P20 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 179931

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 21    tcccctactcccctctcctctcctt 45
             |||||| ||||||||||||||||||
Sbjct: 44565 tcccctcctcccctctcctctcctt 44541
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 21       tcccctactcccctctcctct 41
                |||||||||||||||||||||
Sbjct: 20967514 tcccctactcccctctcctct 20967494
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>ref|XM_343188.2| PREDICTED: Rattus norvegicus similar to RNA polymerase III subunit
            RPC2 (LOC362858), mRNA
          Length = 4503

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  gctgctgctggccctcgccgt 405
            |||||||||||||||||||||
Sbjct: 3763 gctgctgctggccctcgccgt 3743
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470G10
          Length = 145419

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    tcccctactcccctctcctct 41
             |||||||||||||||||||||
Sbjct: 90986 tcccctactcccctctcctct 90966
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>dbj|AB257750.1| Bos taurus mRNA for nestin, partial cds
          Length = 276

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 23  ccctactcccctctcctctcctttg 47
           |||||||||||||||||| ||||||
Sbjct: 238 ccctactcccctctcctcacctttg 262
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>ref|NM_104958.2| Arabidopsis thaliana ASP4 (ASPARTATE AMINOTRANSFERASE 4);
           catalytic/ transaminase/ transferase, transferring
           nitrogenous groups AT1G62800 (ASP4) transcript variant
           AT1G62800.1 mRNA, complete cds
          Length = 1490

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 411 tcttggcgctgcacctcctg 430
           ||||||||||||||||||||
Sbjct: 548 tcttggcgctgcacctcctg 567
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>ref|NM_179507.1| Arabidopsis thaliana ASP4 (ASPARTATE AMINOTRANSFERASE 4);
           catalytic/ transaminase/ transferase, transferring
           nitrogenous groups AT1G62800 (ASP4) transcript variant
           AT1G62800.2 mRNA, complete cds
          Length = 1496

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 411 tcttggcgctgcacctcctg 430
           ||||||||||||||||||||
Sbjct: 554 tcttggcgctgcacctcctg 573
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>gb|AC098644.4| Takifugu rubripes clone 205P11, complete sequence
          Length = 89481

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ctactcccctctcctctcct 44
             ||||||||||||||||||||
Sbjct: 38726 ctactcccctctcctctcct 38707
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>gb|AC151667.1| Pan troglodytes chromosome X clone RP43-007H19 map human ortholog q28,
             complete sequence
          Length = 200796

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   gccacatttatttgccacct 170
             ||||||||||||||||||||
Sbjct: 31105 gccacatttatttgccacct 31086
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>gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, complete sequence
          Length = 181915

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gccacatttatttgccacct 170
              ||||||||||||||||||||
Sbjct: 145891 gccacatttatttgccacct 145872
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     cggccagccgcatcgagaaa 226
               ||||||||||||||||||||
Sbjct: 2907356 cggccagccgcatcgagaaa 2907337
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>gb|AC144860.2| Mus musculus BAC clone RP24-133K9 from chromosome 17, complete
            sequence
          Length = 170928

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 180  acacctccccaccccagctt 199
            ||||||||||||||||||||
Sbjct: 6389 acacctccccaccccagctt 6370
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>gb|AC126437.3| Mus musculus BAC clone RP24-211B22 from chromosome 14, complete sequence
          Length = 167869

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 21     tcccctactcccctctcctctcct 44
              |||||| |||||||||||||||||
Sbjct: 121581 tcccctcctcccctctcctctcct 121558
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>gb|AC161206.10| Mus musculus chromosome 15, clone RP24-299A13, complete sequence
          Length = 165791

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tcccctactcccctctcctctcct 44
             |||||| |||||||||||||||||
Sbjct: 31056 tcccctcctcccctctcctctcct 31033
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>gb|AC079987.5| Homo sapiens BAC clone RP11-655J18 from 7, complete sequence
          Length = 82151

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 326   ttcttgtttgttttcttgcgaaga 349
             ||||||||||||||||||| ||||
Sbjct: 42465 ttcttgtttgttttcttgcaaaga 42488
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>gb|AC121858.3| Mus musculus BAC clone RP24-104B23 from chromosome 8, complete sequence
          Length = 177226

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    tcccctactcccctctcctctcct 44
             |||||| |||||||||||||||||
Sbjct: 87221 tcccctcctcccctctcctctcct 87244
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>gb|AC132264.3| Mus musculus BAC clone RP24-371N18 from chromosome 19, complete
             sequence
          Length = 125468

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tcccctactcccctctcctctcct 44
             |||||| |||||||||||||||||
Sbjct: 76633 tcccctcctcccctctcctctcct 76610



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tcccctactcccctctcctctcct 44
             |||||| |||||||||||||||||
Sbjct: 76528 tcccctcctcccctctcctctcct 76505
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>emb|AL390776.16| Human DNA sequence from clone RP11-182I23 on chromosome 1 Contains the
             5' end of the PRNPIP gene for prion protein interacting
             protein and a CpG island, complete sequence
          Length = 86428

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    cccctctcctctcctttgtt 49
             ||||||||||||||||||||
Sbjct: 18643 cccctctcctctcctttgtt 18624
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>emb|AL078603.4|HSJ364H10 Human DNA sequence from clone RP3-364H10 on chromosome 6q16.1-16.3,
             complete sequence
          Length = 150355

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ctctcctctcctttgttgct 52
             ||||||||||||||||||||
Sbjct: 18815 ctctcctctcctttgttgct 18796
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     cggccagccgcatcgagaaa 226
               ||||||||||||||||||||
Sbjct: 1085919 cggccagccgcatcgagaaa 1085900
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 385    gctgctgctggccctcgccgtgctcttc 412
              ||||||||||||||||||| ||| ||||
Sbjct: 226725 gctgctgctggccctcgccctgcccttc 226752
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     ggcgcggcgcagcagctcct 95
              ||||||||||||||||||||
Sbjct: 282153 ggcgcggcgcagcagctcct 282134
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>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence
          Length = 217337

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     tcccctactcccctctcctc 40
              ||||||||||||||||||||
Sbjct: 141079 tcccctactcccctctcctc 141060
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    cgccaagccaaggtcccaaa 269
              ||||||||||||||||||||
Sbjct: 900882 cgccaagccaaggtcccaaa 900863
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>gb|AC107222.6| Homo sapiens BAC clone RP11-616K6 from 4, complete sequence
          Length = 111550

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    aggggcacacctccccaccc 193
              ||||||||||||||||||||
Sbjct: 101149 aggggcacacctccccaccc 101130
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>gb|AC160108.2| Mus musculus BAC clone RP24-155K11 from chromosome 13, complete
            sequence
          Length = 168567

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ctcccctctcctctcctttg 47
            ||||||||||||||||||||
Sbjct: 9939 ctcccctctcctctcctttg 9958
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    cggccagccgcatcgagaaa 226
              ||||||||||||||||||||
Sbjct: 680586 cggccagccgcatcgagaaa 680567
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>gb|AC091633.22| Homo sapiens 3 BAC RP11-506F8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153896

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tcccctactcccctctcctctcct 44
             |||||| |||||||||||||||||
Sbjct: 62271 tcccctcctcccctctcctctcct 62248
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>gb|AC069213.22| Homo sapiens 3 BAC RP11-338O10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171460

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tcccctactcccctctcctctcct 44
             |||||| |||||||||||||||||
Sbjct: 16892 tcccctcctcccctctcctctcct 16869
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>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence
          Length = 223367

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 21     tcccctactcccctctcctctcct 44
              |||||| |||||||||||||||||
Sbjct: 127458 tcccctcctcccctctcctctcct 127435
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>gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana BAC F23N19 from chromosome I,
             complete sequence
          Length = 86801

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   tcttggcgctgcacctcctg 430
             ||||||||||||||||||||
Sbjct: 68875 tcttggcgctgcacctcctg 68856
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>gb|AC005043.2|AC005043 Homo sapiens BAC clone RP11-576N21 from 1, complete sequence
          Length = 163417

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   cccctctcctctcctttgtt 49
            ||||||||||||||||||||
Sbjct: 4075 cccctctcctctcctttgtt 4094
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>gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 324604

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gccacatttatttgccacct 170
              ||||||||||||||||||||
Sbjct: 141344 gccacatttatttgccacct 141325
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 204     tcccggccagccgcatcgag 223
               ||||||||||||||||||||
Sbjct: 1597893 tcccggccagccgcatcgag 1597874
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>gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence
          Length = 83030

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    tcccctactcccctctcctc 40
             ||||||||||||||||||||
Sbjct: 62302 tcccctactcccctctcctc 62283
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>gb|AC147917.2| Xenopus tropicalis clone CH216-8L20, complete sequence
          Length = 217217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    aaagccacatttatttgcca 167
              ||||||||||||||||||||
Sbjct: 130655 aaagccacatttatttgcca 130674
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>gb|AC104225.18| Mus musculus chromosome 15, clone RP23-74H8, complete sequence
          Length = 246325

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 21     tcccctactcccctctcctctcct 44
              |||||| |||||||||||||||||
Sbjct: 121889 tcccctcctcccctctcctctcct 121866
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     ccccggcgcggcgcagcagc 91
              ||||||||||||||||||||
Sbjct: 804313 ccccggcgcggcgcagcagc 804294
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 323     agcttcttgtttgttttctt 342
               ||||||||||||||||||||
Sbjct: 1155742 agcttcttgtttgttttctt 1155761
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>gb|U15035.1|ATU15035 Arabidopsis thaliana aspartate aminotransferase (Asp4) mRNA,
           complete cds
          Length = 1444

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 411 tcttggcgctgcacctcctg 430
           ||||||||||||||||||||
Sbjct: 548 tcttggcgctgcacctcctg 567
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>emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chromosome 2, complete
             sequence
          Length = 217837

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tcccctactcccctctcctctcct 44
             |||||||||| |||||||||||||
Sbjct: 26703 tcccctactctcctctcctctcct 26680


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,746,112
Number of Sequences: 3902068
Number of extensions: 4746112
Number of successful extensions: 114685
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113987
Number of HSP's gapped (non-prelim): 698
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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