ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet34f01 |
|---|---|
| Clone Library Name | barley_pub |
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 180 bits (456), Expect = 8e-46 Identities = 85/108 (78%), Positives = 100/108 (92%), Gaps = 1/108 (0%) Frame = +2 Query: 83 IGSLVPRQ-APGSYGLPFVSAIRDRLDFYYFQGEAKYFESRVEKHGSTVLRINVPPGPFM 259 +G +PR+ PGSYG+PFVSA+RDRLDFYY QG+ KYFESR E++GSTV+RINVPPGPFM Sbjct: 3 LGVPLPRRPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYGSTVVRINVPPGPFM 62 Query: 260 ARDPRVVAVLDAKSFPVLFDVDKVEKKNLFTGTYMPSTSLTGGFRVCA 403 ARDPRVVA+LDAKSFPVLFDV KVEK+++FTGT+MPSTSLTGG+RVCA Sbjct: 63 ARDPRVVALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCA 110
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 146 bits (368), Expect = 1e-35 Identities = 65/99 (65%), Positives = 84/99 (84%) Frame = +2 Query: 101 RQAPGSYGLPFVSAIRDRLDFYYFQGEAKYFESRVEKHGSTVLRINVPPGPFMARDPRVV 280 RQ PG YGLP + I+DRLD++Y QG ++F+SR++K+ STV R N+PPGPF+A +PRV+ Sbjct: 73 RQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYKSTVYRANMPPGPFIASNPRVI 132 Query: 281 AVLDAKSFPVLFDVDKVEKKNLFTGTYMPSTSLTGGFRV 397 +LDAKSFPVLFD+ KVEKK+LFTGTYMPST LTGG+R+ Sbjct: 133 VLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRI 171
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 145 bits (367), Expect = 2e-35 Identities = 65/99 (65%), Positives = 83/99 (83%) Frame = +2 Query: 101 RQAPGSYGLPFVSAIRDRLDFYYFQGEAKYFESRVEKHGSTVLRINVPPGPFMARDPRVV 280 R PG+YGLP V I+DR D++Y QG ++F+SR+ K+ STV R+N+PPG F+A +P+VV Sbjct: 55 RNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVV 114 Query: 281 AVLDAKSFPVLFDVDKVEKKNLFTGTYMPSTSLTGGFRV 397 A+LD KSFPVLFDVDKVEKK+LFTGTYMPST LTGG+R+ Sbjct: 115 ALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRI 153
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 137 bits (345), Expect = 6e-33 Identities = 62/100 (62%), Positives = 82/100 (82%), Gaps = 1/100 (1%) Frame = +2 Query: 101 RQAPGSYGLPFVSAIRDRLDFYYFQG-EAKYFESRVEKHGSTVLRINVPPGPFMARDPRV 277 R+ PGSYG+PF I+DRL+++Y G +YF SR++K+ STV R N+PPGPF++ +P+V Sbjct: 9 REIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKV 68 Query: 278 VAVLDAKSFPVLFDVDKVEKKNLFTGTYMPSTSLTGGFRV 397 + +LDAKSFP+LFDV KVEKK+LFTGTYMPST LTG +RV Sbjct: 69 IVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGAYRV 108
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 131 bits (330), Expect = 3e-31 Identities = 63/100 (63%), Positives = 78/100 (78%), Gaps = 1/100 (1%) Frame = +2 Query: 101 RQAPGSYGLPFVSAIRDRLDFYYFQGEAK-YFESRVEKHGSTVLRINVPPGPFMARDPRV 277 R+ PG YG P V AIRDR +++Y G +F +RV H STV+R+N+PPGPF+ARDPRV Sbjct: 48 RKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRV 107 Query: 278 VAVLDAKSFPVLFDVDKVEKKNLFTGTYMPSTSLTGGFRV 397 VA+LDA SFPVLFD V+K +LFTGT+MPST LTGG+RV Sbjct: 108 VALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRV 147
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 130 bits (326), Expect = 1e-30 Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 1/105 (0%) Frame = +2 Query: 92 LVPRQAPGSYGLPFVSAIRDRLDFYYFQGEAKYFESRVEKHG-STVLRINVPPGPFMARD 268 L+ R+ PG YG+PF+S +RDRLD+YYFQG ++F SRV +HG +TVLR+N+PPGPF+A D Sbjct: 27 LLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVARHGGATVLRVNMPPGPFLAGD 86 Query: 269 PRVVAVLDAKSFPVLFDVDKVEKKNLFTGTYMPSTSLTGGFRVCA 403 PRVVA+LDA+SF VL D V+K + GT+MPS +L GG R A Sbjct: 87 PRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLA 131
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 127 bits (318), Expect = 8e-30 Identities = 60/102 (58%), Positives = 78/102 (76%), Gaps = 1/102 (0%) Frame = +2 Query: 101 RQAPGSYGLPFVSAIRDRLDFYYFQGEAKYFESRVEKHG-STVLRINVPPGPFMARDPRV 277 R+ PG YG+PF S +RDRLD++YFQG +YF SRV +HG +TVLR+N+PPGPF++ +PRV Sbjct: 30 REIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPGPFISGNPRV 89 Query: 278 VAVLDAKSFPVLFDVDKVEKKNLFTGTYMPSTSLTGGFRVCA 403 VA+LDA+SF VL D V+K + GTYMPS +L GG R A Sbjct: 90 VALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLA 131
>IPYR_HAEDU (Q7VPC0) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 175 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +2 Query: 236 NVPPGPFMARDPRVVAVLDAKSFPVLFDVDKVEKKNLFTGTYM 364 NVP G + D VV + A S P+ ++VDK E +LF +M Sbjct: 5 NVPAGKALPDDIYVVIEIPANSDPIKYEVDK-ESGSLFVDRFM 46
>SYV_CHLTE (Q8KC74) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 901 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 310 HWEALGVEHGDHARVARHEGA 248 HWEA+G H +H+RV + EGA Sbjct: 26 HWEAIGTFHAEHSRVLK-EGA 45
>CP131_DROME (Q9VFJ0) Probable cytochrome P450 313a1 (EC 1.14.-.-)| (CYPCCCXIIIA1) Length = 492 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = +2 Query: 110 PGSYGLPFVSAIRDRLDFYYFQGEAKYFESRVEKHGSTVLRINVPPGPFMARDPRVV 280 PG GLP + + + + Y + + + + K+GST+L P + RDP+VV Sbjct: 33 PGPIGLPILGSSLENIITY--KRKLSFRTKYLNKYGSTILTWMGPVPFIVTRDPKVV 87
>SYA_MYCS5 (Q4A633) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 878 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 3/86 (3%) Frame = +2 Query: 143 IRDRLDFYYFQGEAKYFESRVEKHGSTVLRINVPPGPFMARDPRVVAVLDAKSFPVLFDV 322 I D+ FY G K+ +E++G + +NV F +VV L +K++PV V Sbjct: 488 ILDKTPFYATSGGQKHDRGYIEQNGVKLEILNVFKDKFGNHVHKVVGKL-SKNYPVTCQV 546 Query: 323 DKVEKKNL---FTGTYMPSTSLTGGF 391 D ++ L +GT++ +L F Sbjct: 547 DLKIRRGLERNHSGTHLMFCALRNVF 572
>IPYR_SALTY (P65748) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 175 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 233 INVPPGPFMARDPRVVAVLDAKSFPVLFDVDKVEKKNLFTGTYM 364 +NVP G + D VV + A + P+ ++VDK E LF +M Sbjct: 3 LNVPAGKELPEDIYVVIEIPANADPIKYEVDK-ESGALFVDRFM 45
>IPYR_SALTI (P65749) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 175 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 233 INVPPGPFMARDPRVVAVLDAKSFPVLFDVDKVEKKNLFTGTYM 364 +NVP G + D VV + A + P+ ++VDK E LF +M Sbjct: 3 LNVPAGKELPEDIYVVIEIPANADPIKYEVDK-ESGALFVDRFM 45
>SPC34_SCHPO (O14285) DASH complex subunit spc34 (Outer kinetochore protein| spc34) Length = 164 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +2 Query: 131 FVSAIRDRLDFYYFQGEAKYFESRVEKH 214 +V+ I + LD Y QG +Y E+ VEK+ Sbjct: 75 YVACIEELLDIYPMQGGREYLETLVEKY 102
>IPYR_ECOLI (P0A7A9) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 175 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +2 Query: 233 INVPPGPFMARDPRVVAVLDAKSFPVLFDVDKVEKKNLFTGTYM 364 +NVP G + D VV + A + P+ +++DK E LF +M Sbjct: 3 LNVPAGKDLPEDIYVVIEIPANADPIKYEIDK-ESGALFVDRFM 45
>IPYR_ECOL6 (Q8FAG0) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 175 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +2 Query: 233 INVPPGPFMARDPRVVAVLDAKSFPVLFDVDKVEKKNLFTGTYM 364 +NVP G + D VV + A + P+ +++DK E LF +M Sbjct: 3 LNVPAGKDLPEDIYVVIEIPANADPIKYEIDK-ESGALFVDRFM 45
>IPYR_ECO57 (P0A7B0) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 175 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +2 Query: 233 INVPPGPFMARDPRVVAVLDAKSFPVLFDVDKVEKKNLFTGTYM 364 +NVP G + D VV + A + P+ +++DK E LF +M Sbjct: 3 LNVPAGKDLPEDIYVVIEIPANADPIKYEIDK-ESGALFVDRFM 45
>AZOR_XENAZ (Q8KU07) NAD(P)H azoreductase (EC 1.7.-.-)| Length = 281 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Frame = +2 Query: 125 LPFVSAIRDRLDFYYFQGEAK--YFESR------VEKHGSTVLRINVPPG--PFMARDPR 274 L + AIR++ +FY GE K + ++R V++ T R PG P A Sbjct: 140 LMYAQAIREKGEFYMPLGEGKVSWIDARDIAAVAVQRVDQTRAREPGLPGDGPQFAAGAE 199 Query: 275 VVAVLDAKSFPVLFDVDKVEKKNLFTGTYMPST 373 V A L A+ PV ++ TG MP + Sbjct: 200 VAAALSARGAPVRTWRSHWNRRRAMTGMGMPES 232
>TRPC_XANCP (Q8PD70) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 265 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/61 (27%), Positives = 24/61 (39%) Frame = +2 Query: 98 PRQAPGSYGLPFVSAIRDRLDFYYFQGEAKYFESRVEKHGSTVLRINVPPGPFMARDPRV 277 P SY S + D Y+FQG Y + E VLR + P+ + RV Sbjct: 76 PADIAVSYEFGGASCLSVLTDMYFFQGSDAYLQQAREACTLPVLRKDFTVDPYQVYEARV 135 Query: 278 V 280 + Sbjct: 136 L 136
>FAS1_SCHPO (Q9UUG0) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2073 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +2 Query: 125 LPFVSAIRDRLDFYYFQGEAKYFESRVEKHGSTVLRINVPPGPFMAR 265 +PF+ AI D +FY+ + E G V R+ + GP A+ Sbjct: 1017 VPFIPAIDDTFEFYFKKDSLWQSEDLAAVVGEDVGRVAILQGPMAAK 1063
>RRMJ_METMA (Q8PUP4) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 268 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%) Frame = +2 Query: 146 RDRLDFYYFQGEAKYFESRV--------EKH-----GSTVLRINVPPGPFM 259 RDR D+YY Q + + + SR EKH G +V+ + PG ++ Sbjct: 3 RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53
>RRMJ_METAC (Q8TR92) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 272 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%) Frame = +2 Query: 146 RDRLDFYYFQGEAKYFESRV--------EKH-----GSTVLRINVPPGPFM 259 RDR D+YY Q + + + SR EKH G +V+ + PG ++ Sbjct: 3 RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53
>MCM6_ANOGA (Q7Q0Q1) DNA replication licensing factor Mcm6| Length = 814 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Frame = +2 Query: 257 MARDPRVVAVLDAKSFPVLFDVDKVEK---KNLFTG---TYMPSTSLTGGFRVC 400 M+RDPR+ L FP ++ D+V++ LF G T T+L G VC Sbjct: 333 MSRDPRLYQNLINSLFPSIYGNDEVKRGILLMLFGGVAKTTQEKTTLRGDINVC 386
>C90D2_ORYSA (Q94IW5) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase)| Length = 490 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +2 Query: 101 RQAPGSYGLPFVSAIRDRLDFYYFQGEAKYFESRVEKHGSTVLR 232 R PGS+G P V + + Y + + R + HGS V R Sbjct: 48 RLPPGSFGWPVVGETLEFVSCAYSPRPEAFVDKRRKLHGSAVFR 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,434,615 Number of Sequences: 219361 Number of extensions: 562937 Number of successful extensions: 1811 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1786 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1806 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
