>LRP1_HHV1F (P17588) Latency-related protein 1|
          Length = 340

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = +3

Query: 30  RRPTPGCHAHPHVRLPPAGRRGRCHRPHSR----PRT 128
           R PTP   +HPH R PP  R      PHS     PRT
Sbjct: 41  RTPTP---SHPHSRAPPLPRAPTPTHPHSHAPPLPRT 74

>GPHA2_RAT (Q925Q4) Glycoprotein hormone alpha 2 precursor (Thyrostimulin|
           alpha subunit)
          Length = 130

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 36  PTPGCHAHPHVRLPPAGRRGRCHRPH 113
           P PGCH HP      + R G C   H
Sbjct: 28  PIPGCHLHPFNVTVRSDRHGTCQGSH 53

>LRP2_HHV1F (P17589) Latency-related protein 2|
          Length = 107

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 30  RRPTPGCHAHPHVRLPPAGRRGRCHRPHSR--PRTL 131
           R PTP   AHPH   PP  R      PHS   PR++
Sbjct: 23  RTPTP---AHPHSHAPPLPRTPTPTHPHSHAPPRSI 55

>SCN5A_RAT (P15389) Sodium channel protein type 5 alpha subunit (Sodium channel|
            protein type V alpha subunit) (Voltage-gated sodium
            channel alpha subunit Nav1.5) (Sodium channel protein,
            cardiac muscle alpha-subunit)
          Length = 2019

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -1

Query: 313  WSSGSEKSSS---AMRSHGDWLRSQQGSPQEEASGTTRSPLDS 194
            WS  SE +SS   A  S  DW + Q+  PQ  A G   +P DS
Sbjct: 1097 WSQVSETTSSEAGASTSQADWQQEQKTEPQ--APGCGETPEDS 1137


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,107,108
Number of Sequences: 219361
Number of extensions: 713860
Number of successful extensions: 3162
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3150
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)