Clone Information

BLAST Search Result

Clone Name	baet34d07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast...	198	4e-51
2	PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast...	198	4e-51
3	POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (...	186	2e-47
4	PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast...	167	1e-41
5	POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast pr...	164	7e-41
6	POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast prec...	163	2e-40
7	PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast...	161	6e-40
8	PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast...	160	1e-39
9	PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast...	159	2e-39
10	PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast p...	156	2e-38
11	POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast pr...	145	3e-35
12	POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast pr...	127	1e-29
13	POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase...	100	1e-21
14	POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase...	100	2e-21
15	WWOX_CHICK (Q5F389) WW domain-containing oxidoreductase (EC 1.1....	64	2e-10
16	DHRSX_HUMAN (Q8N5I4) Dehydrogenase/reductase SDR family member o...	63	3e-10
17	WWOX_BRARE (Q803A8) WW domain-containing oxidoreductase (EC 1.1....	62	6e-10
18	RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alco...	60	3e-09
19	RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alco...	59	4e-09
20	WWOX_PONPY (Q5R9W5) WW domain-containing oxidoreductase (EC 1.1....	58	9e-09
21	WWOX_HUMAN (Q9NZC7) WW domain-containing oxidoreductase (EC 1.1....	58	9e-09
22	RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)	57	2e-08
23	RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)	57	2e-08
24	RDH11_HUMAN (Q8TC12) Retinol dehydrogenase 11 (EC 1.1.1.-) (Reti...	57	2e-08
25	DHRSX_MOUSE (Q8VBZ0) Dehydrogenase/reductase SDR family member o...	57	3e-08
26	RDH11_MOUSE (Q9QYF1) Retinol dehydrogenase 11 (EC 1.1.1.-) (Reti...	55	8e-08
27	RDH12_HUMAN (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-) (All-...	54	2e-07
28	WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1....	53	3e-07
29	RDH12_MOUSE (Q8BYK4) Retinol dehydrogenase 12 (EC 1.1.1.-)	50	2e-06
30	RDH12_BOVIN (P59837) Retinol dehydrogenase 12 (EC 1.1.1.-) (Doub...	49	7e-06
31	OXIR_STRLI (P35320) Probable oxidoreductase (EC 1.-.-.-)	45	6e-05
32	OXIR_STRAT (Q03326) Probable oxidoreductase (EC 1.-.-.-)	45	8e-05
33	WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1....	41	0.001
34	BLI4_NEUCR (Q92247) Putative oxidoreductase bli-4, mitochondrial...	32	0.71
35	IMDH_RHITR (Q9KH33) Inosine-5'-monophosphate dehydrogenase (EC 1...	30	2.1
36	HES3_RAT (Q04667) Transcription factor HES-3 (Hairy and enhancer...	30	2.7
37	ZP2_RABIT (P48829) Zona pellucida sperm-binding protein 2 precur...	29	6.0
38	DHB7_RAT (Q62904) 3-keto-steroid reductase (EC 1.1.1.270) (Estra...	28	7.9
39	CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 ...	28	7.9

>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC|
           1.3.1.33) (PCR A) (NADPH-protochlorophyllide
           oxidoreductase A) (POR A)
          Length = 388

 Score =  198 bits (504), Expect = 4e-51
 Identities = 100/121 (82%), Positives = 100/121 (82%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVRQFVDAFRR EMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL
Sbjct: 135 SLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 194

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDGD 444
           LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPK                    MIDGD
Sbjct: 195 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKASLGDLRGLAGGLSGASGSAMIDGD 254

Query: 445 E 447
           E
Sbjct: 255 E 255

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>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC|
           1.3.1.33) (PCR A) (NADPH-protochlorophyllide
           oxidoreductase A) (POR A)
          Length = 388

 Score =  198 bits (504), Expect = 4e-51
 Identities = 100/121 (82%), Positives = 100/121 (82%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVRQFVDAFRR EMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL
Sbjct: 135 SLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 194

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDGD 444
           LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPK                    MIDGD
Sbjct: 195 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKASLGDLRGLAGGLSGASGSAMIDGD 254

Query: 445 E 447
           E
Sbjct: 255 E 255

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>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)|
           (NADPH-protochlorophyllide oxidoreductase) (POR)
           (Fragment)
          Length = 313

 Score =  186 bits (472), Expect = 2e-47
 Identities = 94/121 (77%), Positives = 97/121 (80%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVRQFVDAFRR EMPLDVLVCNAAIYRPTAR PTFTA+G EMSVGVNHLGHFLLARL
Sbjct: 60  SLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARKPTFTAEGVEMSVGVNHLGHFLLARL 119

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDGD 444
           L+EDLQKSDYPSRR+VIVGSITGN NTLAGNVPPK                    MIDGD
Sbjct: 120 LLEDLQKSDYPSRRLVIVGSITGNDNTLAGNVPPKANLGDLRGLAGGLTGASGSAMIDGD 179

Query: 445 E 447
           E
Sbjct: 180 E 180

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>PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast precursor (EC|
           1.3.1.33) (PCR A) (NADPH-protochlorophyllide
           oxidoreductase A) (POR A)
          Length = 405

 Score =  167 bits (423), Expect = 1e-41
 Identities = 80/121 (66%), Positives = 94/121 (77%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVRQFVD FRR EMPLDVLVCNAA+Y+PTA  PTFTA+G E+SVG+NHLGHFLL+RL
Sbjct: 153 SLDSVRQFVDNFRRAEMPLDVLVCNAAVYQPTANQPTFTAEGFELSVGINHLGHFLLSRL 212

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDGD 444
           L++DL+ SDYPS+R++IVGSITGN+NTLAGNVPPK                    MIDG 
Sbjct: 213 LIDDLKNSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGG 272

Query: 445 E 447
           +
Sbjct: 273 D 273

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>POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 398

 Score =  164 bits (416), Expect = 7e-41
 Identities = 80/121 (66%), Positives = 92/121 (76%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVRQFV+ FRR E PLDVLVCNAA+Y PTA+ PT+TADG E+SVG NHLGHFLL+RL
Sbjct: 146 SLDSVRQFVETFRRSERPLDVLVCNAAVYFPTAKEPTYTADGFELSVGTNHLGHFLLSRL 205

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDGD 444
           L++DL KSDYPS+R++IVGSITGN+NTLAGNVPPK                    MIDG 
Sbjct: 206 LLDDLNKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGMNSSAMIDGA 265

Query: 445 E 447
           E
Sbjct: 266 E 266

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>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 399

 Score =  163 bits (412), Expect = 2e-40
 Identities = 80/121 (66%), Positives = 93/121 (76%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVRQFVD FRR EMPLDVL+ NAA+Y PTA+ P+FTADG E+SVG NHLGHFLL+RL
Sbjct: 147 SLDSVRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGHFLLSRL 206

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDGD 444
           L+EDL+KSDYPS+R++IVGSITGN+NTLAGNVPPK                    MIDG 
Sbjct: 207 LLEDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLTGLNSSAMIDGG 266

Query: 445 E 447
           +
Sbjct: 267 D 267

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>PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast precursor (EC|
           1.3.1.33) (PCR B) (NADPH-protochlorophyllide
           oxidoreductase B) (POR B)
          Length = 401

 Score =  161 bits (408), Expect = 6e-40
 Identities = 78/121 (64%), Positives = 92/121 (76%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVRQFVD FRR E PLDVLVCNAA+Y PTA+ PT++A+G E+SV  NHLGHFLLARL
Sbjct: 149 SLDSVRQFVDNFRRTETPLDVLVCNAAVYFPTAKEPTYSAEGFELSVATNHLGHFLLARL 208

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDGD 444
           L++DL+KSDYPS+R++IVGSITGN+NTLAGNVPPK                    MIDG 
Sbjct: 209 LLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGG 268

Query: 445 E 447
           +
Sbjct: 269 D 269

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>PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC|
           1.3.1.33) (PCR B) (NADPH-protochlorophyllide
           oxidoreductase B) (POR B)
          Length = 395

 Score =  160 bits (406), Expect = 1e-39
 Identities = 78/121 (64%), Positives = 93/121 (76%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVRQFV   R+++MP+DV+VCNAA+Y+PTA+ P+FTADG EMSVGVNHLGHFLLAR 
Sbjct: 143 SLDSVRQFVKNVRQLDMPIDVVVCNAAVYQPTAKEPSFTADGFEMSVGVNHLGHFLLARE 202

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDGD 444
           L+EDL+ SDYPS+R++IVGSITGN+NTLAGNVPPK                    MIDG 
Sbjct: 203 LLEDLKASDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAAGLNGVGSAAMIDGA 262

Query: 445 E 447
           E
Sbjct: 263 E 263

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>PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast precursor (EC|
           1.3.1.33) (PCR C) (NADPH-protochlorophyllide
           oxidoreductase C) (POR C)
          Length = 401

 Score =  159 bits (403), Expect = 2e-39
 Identities = 73/95 (76%), Positives = 89/95 (93%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SL+SV+QFV+ FRR E PLDVLVCNAA+Y+PTA+ P+FTA+G E+SVG NHLGHFLL+RL
Sbjct: 150 SLESVKQFVENFRRTEQPLDVLVCNAAVYQPTAKEPSFTAEGFEISVGTNHLGHFLLSRL 209

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPK 369
           L++DL+KSDYPS+RM+IVGSITGN+NTLAGNVPPK
Sbjct: 210 LLDDLKKSDYPSKRMIIVGSITGNTNTLAGNVPPK 244

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>PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 398

 Score =  156 bits (395), Expect = 2e-38
 Identities = 74/95 (77%), Positives = 85/95 (89%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVRQFVD FR+   PLDVLVCNAA+Y PTA+ PTFTA+G E+SVG NHLGHFLL+RL
Sbjct: 147 SLDSVRQFVDNFRQSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRL 206

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPK 369
           L+EDL KS YPS+R++IVGSITGN+NTLAGNVPPK
Sbjct: 207 LLEDLNKSSYPSKRLIIVGSITGNTNTLAGNVPPK 241

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>POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 458

 Score =  145 bits (367), Expect = 3e-35
 Identities = 74/121 (61%), Positives = 84/121 (69%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           S DSVR FVD FRR E  LDVLVCNAA+Y PT + P F+A+G E+SVG NH+GHFLLARL
Sbjct: 206 SFDSVRAFVDNFRRTERQLDVLVCNAAVYFPTDKEPKFSAEGFELSVGTNHMGHFLLARL 265

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDGD 444
           LMEDLQK+    +RM+IVGSITGNSNT+AGNVPPK                    MIDG 
Sbjct: 266 LMEDLQKAKDSLKRMIIVGSITGNSNTVAGNVPPKANLGHLRGLAGGLNGVNSSSMIDGG 325

Query: 445 E 447
           E
Sbjct: 326 E 326

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>POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 397

 Score =  127 bits (320), Expect = 1e-29
 Identities = 62/95 (65%), Positives = 73/95 (76%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SL+SVRQFV  F+     LD LVCNAA+Y PTA+ P FTADG E+SVG NHLGHFLL  L
Sbjct: 146 SLESVRQFVQNFKASGRRLDALVCNAAVYLPTAKEPRFTADGFELSVGTNHLGHFLLTNL 205

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPK 369
           L++DL+ +     R +IVGSITGN+NTLAGNVPPK
Sbjct: 206 LLDDLKNAPNKQPRCIIVGSITGNTNTLAGNVPPK 240

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>POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR) (LPOR)
          Length = 322

 Score =  100 bits (250), Expect = 1e-21
 Identities = 47/92 (51%), Positives = 63/92 (68%)
 Frame = +1

Query: 88  LDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLL 267
           LDSVR+FV  FR +  PL  LVCNAA+Y P    P ++AD +E+SV  NHLGHFLL  LL
Sbjct: 67  LDSVRRFVAQFRELGRPLKALVCNAAVYFPLLDEPLWSADDYELSVATNHLGHFLLCNLL 126

Query: 268 MEDLQKSDYPSRRMVIVGSITGNSNTLAGNVP 363
           +EDL+      +R++I+G++T NS  L G +P
Sbjct: 127 LEDLKACPDADKRLIILGTVTANSKELGGKIP 158

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>POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR) (LPOR)
          Length = 322

 Score =  100 bits (248), Expect = 2e-21
 Identities = 50/119 (42%), Positives = 67/119 (56%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SLDSVR+FV  FR     LD LVCNAA++ P  + P  + +G+E+SV  NH GHFLL  L
Sbjct: 66  SLDSVRKFVTQFRESGKSLDALVCNAAVHMPLLKEPMRSPEGYELSVATNHFGHFLLCNL 125

Query: 265 LMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKXXXXXXXXXXXXXXXXXXXXMIDG 441
           L+EDL+ S +   R++I+G++T NS  L G +P                      MIDG
Sbjct: 126 LLEDLKHSTHNDPRLIILGTVTANSKELGGKIPIPAPADLGDLSGLEAGFKAPIAMIDG 184

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>WWOX_CHICK (Q5F389) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 414

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 36/77 (46%), Positives = 49/77 (63%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SL SV+ F +AF+   MPL +LVCNAAI+     +   T DG E +  VNHLGHF L +L
Sbjct: 186 SLRSVQNFAEAFKSKNMPLHILVCNAAIF---GSSWCLTEDGLESTFQVNHLGHFYLVQL 242

Query: 265 LMEDLQKSDYPSRRMVI 315
           L ED+ +   P+R +V+
Sbjct: 243 L-EDILRRSSPARVVVV 258

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>DHRSX_HUMAN (Q8N5I4) Dehydrogenase/reductase SDR family member on chromosome X|
           precursor (EC 1.1.-.-) (DHRSXY)
          Length = 330

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           S+ S+RQFV  F+  ++PL VL+ NA +     R    T DG E   G+N+LGHFLL  L
Sbjct: 105 SMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRK---TRDGFEEHFGLNYLGHFLLTNL 161

Query: 265 LMEDLQKSDYP--SRRMVIVGSIT 330
           L++ L++S  P  S R+V V S T
Sbjct: 162 LLDTLKESGSPGHSARVVTVSSAT 185

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>WWOX_BRARE (Q803A8) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 412

 Score = 62.0 bits (149), Expect = 6e-10
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SL SVRQF + F+  ++PL VLVCNAA+     R    T DG E +  + HLGHFLL +L
Sbjct: 183 SLRSVRQFAELFKATKLPLHVLVCNAAVCSQPWR---LTEDGFESTFQICHLGHFLLVQL 239

Query: 265 LMEDLQKSDYPSRRMVI 315
           L +D+ +   P+R +V+
Sbjct: 240 L-QDVLRLSAPARVVVV 255

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>RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol|
           dehydrogenase PAN2)
          Length = 334

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 38/77 (49%), Positives = 45/77 (58%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SL SVR F     + E  LDVL+ NA ++       T T DG EM  GVNHLGHFLL  L
Sbjct: 116 SLRSVRAFCQELLQEEPRLDVLINNAGVFHCPY---TKTEDGFEMQFGVNHLGHFLLTNL 172

Query: 265 LMEDLQKSDYPSRRMVI 315
           L+  L KS  PSR +V+
Sbjct: 173 LL-GLLKSSAPSRIVVV 188

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>RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol|
           dehydrogenase PAN2)
          Length = 336

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLAR 261
           SL SVR F     + E  LDVL+ NA I++ P  +T     DG EM  GVNHLGHFLL  
Sbjct: 118 SLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTE----DGFEMQFGVNHLGHFLLTN 173

Query: 262 LLMEDLQKSDYPSRRMVI 315
           LL+  L KS  PSR +V+
Sbjct: 174 LLL-GLLKSSAPSRIVVV 190

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>WWOX_PONPY (Q5R9W5) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 414

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 35/76 (46%), Positives = 48/76 (63%)
 Frame = +1

Query: 88  LDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLL 267
           L SV+ F +AF+   +PL VLVCNAA +   A   + T DG E +  VNHLGHF L +LL
Sbjct: 187 LRSVQHFAEAFKAKNVPLHVLVCNAATF---ALPWSLTKDGLETTFQVNHLGHFYLVQLL 243

Query: 268 MEDLQKSDYPSRRMVI 315
            + L +S  P+R +V+
Sbjct: 244 QDVLCRS-APARVIVV 258

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>WWOX_HUMAN (Q9NZC7) WW domain-containing oxidoreductase (EC 1.1.1.-) (Fragile|
           site FRA16D oxidoreductase)
          Length = 414

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 35/76 (46%), Positives = 48/76 (63%)
 Frame = +1

Query: 88  LDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLL 267
           L SV+ F +AF+   +PL VLVCNAA +   A   + T DG E +  VNHLGHF L +LL
Sbjct: 187 LRSVQHFAEAFKAKNVPLHVLVCNAATF---ALPWSLTKDGLETTFQVNHLGHFYLVQLL 243

Query: 268 MEDLQKSDYPSRRMVI 315
            + L +S  P+R +V+
Sbjct: 244 QDVLCRS-APARVIVV 258

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>RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)|
          Length = 334

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 35/73 (47%), Positives = 45/73 (61%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SL S+R+F     + E  +D+LV NAA+ R    T   T DG EM  GVN+LGHFLL  L
Sbjct: 100 SLKSIREFARKVIKEEERVDILVNNAAVMRCPHWT---TEDGFEMQFGVNYLGHFLLTNL 156

Query: 265 LMEDLQKSDYPSR 303
           L++ L K+  PSR
Sbjct: 157 LLDKL-KASAPSR 168

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>RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)|
          Length = 331

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 34/73 (46%), Positives = 43/73 (58%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SL S+R+F       E  +D+L+ NA + R    T   T DG EM  GVNHLGHFLL  L
Sbjct: 100 SLKSIREFAAKIIEEEERVDILINNAGVMRCPHWT---TEDGFEMQFGVNHLGHFLLTNL 156

Query: 265 LMEDLQKSDYPSR 303
           L++ L K+  PSR
Sbjct: 157 LLDKL-KASAPSR 168

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>RDH11_HUMAN (Q8TC12) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase|
           1) (RalR1) (Prostate short-chain dehydrogenase/reductase
           1) (Androgen-regulated short-chain
           dehydrogenase/reductase 1) (HCV core-binding protein
           HCBP12)
          Length = 318

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +1

Query: 94  SVRQFVDAFRRVEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLM 270
           S+R F   F   E  L VL+ NA +   P ++T    ADG EM +GVNHLGHFLL  LL+
Sbjct: 106 SIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKT----ADGFEMHIGVNHLGHFLLTHLLL 161

Query: 271 EDLQKSDYPSR 303
           E L++S  PSR
Sbjct: 162 EKLKES-APSR 171

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>DHRSX_MOUSE (Q8VBZ0) Dehydrogenase/reductase SDR family member on chromosome X|
           homolog precursor (EC 1.1.-.-) (SCAD family protein)
           (DHRSXY) (Fragment)
          Length = 280

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIY-RPTARTPTFTADGHEMSVGVNHLGHFLLAR 261
           SL SVR F   F+ + +PL +LV NAA+   P A T     DG E  +GVN LGHFLL  
Sbjct: 105 SLASVRGFARDFQALGLPLHLLVNNAAVMLEPRAETE----DGFERHLGVNFLGHFLLTL 160

Query: 262 LLMEDLQKSDYPSR--RMVIVGSIT 330
           LL+  L+ S    R  R+V VGS T
Sbjct: 161 LLLPALRASGAEGRGSRVVTVGSAT 185

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>RDH11_MOUSE (Q9QYF1) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase|
           1) (RalR1) (Prostate short-chain dehydrogenase/reductase
           1) (Androgen-regulated short-chain
           dehydrogenase/reductase 1) (Short-chain aldehyde
           dehydrogenase) (SCALD) (Cell line M
          Length = 316

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +1

Query: 94  SVRQFVDAFRRVEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLM 270
           S+R F   F   E  L +L+ NA +   P ++T    ADG EM +GVNHLGHFLL  LL+
Sbjct: 103 SIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKT----ADGFEMHIGVNHLGHFLLTHLLL 158

Query: 271 EDLQKSDYPSR 303
           E L++S  PSR
Sbjct: 159 EKLKES-APSR 168

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>RDH12_HUMAN (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis|
           retinol dehydrogenase)
          Length = 316

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +1

Query: 94  SVRQFVDAFRRVEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLM 270
           S+R F + F   E  L +L+ NA +   P ++T    ADG E  +GVNHLGHFLL  LL+
Sbjct: 104 SIRAFAEGFLAEEKQLHILINNAGVMMCPYSKT----ADGFETHLGVNHLGHFLLTYLLL 159

Query: 271 EDLQKSDYPSRRMVIVGSI 327
           E L+ S     R+V V S+
Sbjct: 160 EQLKVS--APARVVNVSSV 176

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>WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 414

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 33/76 (43%), Positives = 45/76 (59%)
 Frame = +1

Query: 88  LDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLL 267
           L SV+ F +AF+   + L VLVCNA  +   A     T DG E +  VNHLGHF L +LL
Sbjct: 187 LRSVQHFAEAFKAKNVSLHVLVCNAGTF---ALPWGLTKDGLETTFQVNHLGHFYLVQLL 243

Query: 268 MEDLQKSDYPSRRMVI 315
            + L +S  P+R +V+
Sbjct: 244 QDVLCRSS-PARVIVV 258

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>RDH12_MOUSE (Q8BYK4) Retinol dehydrogenase 12 (EC 1.1.1.-)|
          Length = 316

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 94  SVRQFVDAFRRVEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLM 270
           S+R F + F   E  L +L+ NA +   P ++T     DG E   GVNHLGHFLL  LL+
Sbjct: 104 SIRAFAERFLAEEKKLHILINNAGVMMCPYSKT----TDGFETHFGVNHLGHFLLTYLLL 159

Query: 271 EDLQKS 288
           E L++S
Sbjct: 160 ERLKES 165

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>RDH12_BOVIN (P59837) Retinol dehydrogenase 12 (EC 1.1.1.-) (Double substrate|
           specificity short chain dehydrogenase/reductase 2)
          Length = 316

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 94  SVRQFVDAFRRVEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLM 270
           S+R F + F   E  L +L+ NA +   P ++T    ADG E  + VNHLGHFLL  LL+
Sbjct: 104 SIRAFAEGFLAEEKQLHILINNAGVMLCPYSKT----ADGFETHLAVNHLGHFLLTHLLL 159

Query: 271 EDLQKS 288
             L++S
Sbjct: 160 GRLKES 165

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>OXIR_STRLI (P35320) Probable oxidoreductase (EC 1.-.-.-)|
          Length = 297

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +1

Query: 109 VDAFRRV-EMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 285
           VD+F R    PLD+LV NA I     RT   T  G EM +  N+LGHF LA  L   L+ 
Sbjct: 70  VDSFARAWRGPLDILVANAGIMALPTRT--LTPYGWEMQLATNYLGHFALATGLHAALR- 126

Query: 286 SDYPSRRMVIVGS 324
            D  S R+V+V S
Sbjct: 127 -DAGSARIVVVSS 138

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>OXIR_STRAT (Q03326) Probable oxidoreductase (EC 1.-.-.-)|
          Length = 298

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 33/77 (42%), Positives = 41/77 (53%)
 Frame = +1

Query: 94  SVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLME 273
           SV  F  A+R    PLD+LV NA I     RT     +G EM +  N+LGHF LA  L  
Sbjct: 70  SVESFARAWRG---PLDILVANAGIMALPTRT--LAPNGWEMQLATNYLGHFALATGLHA 124

Query: 274 DLQKSDYPSRRMVIVGS 324
            L+  D  S R+V+V S
Sbjct: 125 ALR--DAGSARIVVVSS 139

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>WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 409

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 29/77 (37%), Positives = 44/77 (57%)
 Frame = +1

Query: 85  SLDSVRQFVDAFRRVEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARL 264
           SL SV++FV+  ++    +D L+ NA ++   A   T T DG E +  V+HL HF L  L
Sbjct: 185 SLRSVQRFVEEIKQSVSHIDYLILNAGVF---ALPYTRTVDGLETTFQVSHLSHFYLT-L 240

Query: 265 LMEDLQKSDYPSRRMVI 315
            +E L   DY +R +V+
Sbjct: 241 QLETL--FDYKTRIIVL 255

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>BLI4_NEUCR (Q92247) Putative oxidoreductase bli-4, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 412

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 21/71 (29%), Positives = 36/71 (50%)
 Frame = +1

Query: 139 LDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQKSDYPSRRMVIV 318
           LD+LV N+     TA   ++  D H   +  NH+GH +L   L+  LQK+   +   V +
Sbjct: 180 LDILVNNSGRGIMTAGLTSYGVDKH---MATNHMGHVVLTSHLLPLLQKTAEETGETVRI 236

Query: 319 GSITGNSNTLA 351
            + + N ++ A
Sbjct: 237 SNQSSNLHSAA 247

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>IMDH_RHITR (Q9KH33) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 498

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
 Frame = -2

Query: 213 VPVGGEGRRARRGPVDGGV-------AHQHIQRHLDAAERVNELPDAVEGVA 79
           + VG +G       +D GV       AH H QR LDA  RV +L ++V  +A
Sbjct: 229 ISVGDDGYERAERLIDAGVDLLVVDTAHGHSQRVLDAVTRVKKLSNSVRIMA 280

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>HES3_RAT (Q04667) Transcription factor HES-3 (Hairy and enhancer of split 3)|
          Length = 175

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +2

Query: 80  ATPSTASGSSLTRSAASRCRWMCWCATPPSTGPRRARRPSPPTG 211
           A  +T S +  T S  S C    W   PP+ G +  + P PP G
Sbjct: 99  AGSTTDSANPQTASVLSPCLPAIWAPGPPAGGSQSPQSPFPPLG 142

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>ZP2_RABIT (P48829) Zona pellucida sperm-binding protein 2 precursor (Zona|
           pellucida glycoprotein ZP2) (Zona pellucida protein A)
           (75 kDa zona pellucida protein) (Fragment)
          Length = 666

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 226 GVNHLGHFLLARLLMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVP 363
           G +HL    L   L+   QK  +PSR + + G +T N+  +   +P
Sbjct: 181 GTSHLHTMFLKLSLVSPGQKMPFPSRAICLSGPVTCNATHMTLTIP 226

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>DHB7_RAT (Q62904) 3-keto-steroid reductase (EC 1.1.1.270) (Estradiol|
           17-beta-dehydrogenase 7) (EC 1.1.1.62) (17-beta-HSD 7)
           (17-beta-hydroxysteroid dehydrogenase 7) (PRL
           receptor-associated protein) (PRAP)
          Length = 334

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 199 TADGHEMSVGVNHLGHFLLARLLMEDLQKSDYPSR 303
           TADG +     N  GHF+L R L   L  SD PS+
Sbjct: 131 TADGFQEVFETNLFGHFILIRELEPLLCHSDNPSQ 165

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>CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 homolog|
          Length = 572

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 89  STASGSSLTRSAASRCRWMCWCATPPSTGPRRARR----PSP 202
           +  +G + T  AAS C   C C   P+   RR RR    PSP
Sbjct: 149 AVGAGGTGTGGAASCCSCCCCCCGRPTRSGRRGRRRGCSPSP 190


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,613,288
Number of Sequences: 219361
Number of extensions: 611476
Number of successful extensions: 2498
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result