ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet34b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550499.1| Oryza sativa (japonica cultivar-group), mRNA 218 1e-53
2ref|NM_185418.2| Oryza sativa (japonica cultivar-group), mRNA 218 1e-53
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
4dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
5dbj|AK120464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
6dbj|AK102259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
7dbj|AK100531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
8dbj|AK067430.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
9dbj|AK061817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
10gb|AY596579.1| Saccharum officinarum clone SCCCCL4004C06, comple... 161 2e-36
11gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome... 42 1.3
12gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.3
13gb|AC096950.2| Homo sapiens chromosome 1 clone RP4-612J11, compl... 42 1.3
14gb|AC153590.7| Mus musculus 6 BAC RP23-480O11 (Roswell Park Canc... 42 1.3
15gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete... 42 1.3
16gb|AC171104.1| Drosophila melanogaster clone CH221-06A19, comple... 40 5.3
17gb|AC117949.5| Mus musculus BAC clone RP23-197M6 from chromosome... 40 5.3
18gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic... 40 5.3
19gb|AC136986.6| Mus musculus chromosome 12, clone RP23-187H12, co... 40 5.3
20gb|AC130389.3| Drosophila melanogaster 3 BAC CH221-6A19 (Childre... 40 5.3
21emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encodi... 40 5.3
22gb|AC105293.2| Drosophila melanogaster 3L BAC RP98-45O17 (Roswel... 40 5.3
23gb|AC093501.4| Drosophila melanogaster 3L BAC RP98-48E9 (Roswell... 40 5.3
24gb|AC005957.3| Arabidopsis thaliana chromosome 2 clone T15J14 ma... 40 5.3
25gb|AC034176.8| Homo sapiens BAC clone RP11-755F5 from 4, complet... 40 5.3
26gb|AC013477.7| Homo sapiens BAC clone RP11-559F19 from 4, comple... 40 5.3
27dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
28dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
29dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
30emb|CR382295.10| Zebrafish DNA sequence from clone DKEYP-15G12 i... 40 5.3
31gb|AY108967.1| Zea mays PCO119014 mRNA sequence 40 5.3
32gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 ... 40 5.3
33gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, compl... 40 5.3 
>ref|XM_550499.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1450

 Score =  218 bits (110), Expect = 1e-53
 Identities = 206/238 (86%)
 Strand = Plus / Plus

                                                                       
Query: 156 tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
           |||||||||| | ||| || |||||||| || |||||| | | ||| ||| |||||||||
Sbjct: 120 tgggctggagtggcctatcatgggcgattggaatcctcattgcggctccgatcctcaccc 179

                                                                       
Query: 216 aggttgcgcaccaccttgacaggggccagtaccagtcgctcatcctcatcgcggcgacgt 275
           ||| ||| |||||||||||| | |||||||| ||||||||||||||||| || ||||| |
Sbjct: 180 aggctgcacaccaccttgaccgtggccagtatcagtcgctcatcctcattgccgcgacat 239

                                                                       
Query: 276 cgttcggctcgttcttctgcctgctcactggcttcttcaagacggtctgggtgttcctgt 335
           |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 240 cgtttggctcattcttctgcctcctcactggcttcttcaagacagtctgggtgttcctct 299

                                                                     
Query: 336 tctacatcctcttcatcgctgcgtccatcatcattgctgaggctgtgcacacccgcaa 393
           |||||||||| ||||| | ||| ||||||||  |||||||||||||||| || |||||
Sbjct: 300 tctacatcctgttcattggtgcatccatcattgttgctgaggctgtgcatacacgcaa 357
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>ref|NM_185418.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2246

 Score =  218 bits (110), Expect = 1e-53
 Identities = 206/238 (86%)
 Strand = Plus / Plus

                                                                       
Query: 156 tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
           |||||||||| | ||| || |||||||| || |||||| | | ||| ||| |||||||||
Sbjct: 750 tgggctggagtggcctatcatgggcgattggaatcctcattgcggctccgatcctcaccc 809

                                                                       
Query: 216 aggttgcgcaccaccttgacaggggccagtaccagtcgctcatcctcatcgcggcgacgt 275
           ||| ||| |||||||||||| | |||||||| ||||||||||||||||| || ||||| |
Sbjct: 810 aggctgcacaccaccttgaccgtggccagtatcagtcgctcatcctcattgccgcgacat 869

                                                                       
Query: 276 cgttcggctcgttcttctgcctgctcactggcttcttcaagacggtctgggtgttcctgt 335
           |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 870 cgtttggctcattcttctgcctcctcactggcttcttcaagacagtctgggtgttcctct 929

                                                                     
Query: 336 tctacatcctcttcatcgctgcgtccatcatcattgctgaggctgtgcacacccgcaa 393
           |||||||||| ||||| | ||| ||||||||  |||||||||||||||| || |||||
Sbjct: 930 tctacatcctgttcattggtgcatccatcattgttgctgaggctgtgcatacacgcaa 987
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  218 bits (110), Expect = 1e-53
 Identities = 206/238 (86%)
 Strand = Plus / Minus

                                                                          
Query: 156    tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
              |||||||||| | ||| || |||||||| || |||||| | | ||| ||| |||||||||
Sbjct: 796919 tgggctggagtggcctatcatgggcgattggaatcctcattgcggctccgatcctcaccc 796860

                                                                          
Query: 216    aggttgcgcaccaccttgacaggggccagtaccagtcgctcatcctcatcgcggcgacgt 275
              ||| ||| |||||||||||| | |||||||| ||||||||||||||||| || ||||| |
Sbjct: 796859 aggctgcacaccaccttgaccgtggccagtatcagtcgctcatcctcattgccgcgacat 796800

                                                                          
Query: 276    cgttcggctcgttcttctgcctgctcactggcttcttcaagacggtctgggtgttcctgt 335
              |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 796799 cgtttggctcattcttctgcctcctcactggcttcttcaagacagtctgggtgttcctct 796740

                                                                        
Query: 336    tctacatcctcttcatcgctgcgtccatcatcattgctgaggctgtgcacacccgcaa 393
              |||||||||| ||||| | ||| ||||||||  |||||||||||||||| || |||||
Sbjct: 796739 tctacatcctgttcattggtgcatccatcattgttgctgaggctgtgcatacacgcaa 796682
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>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0541H01
          Length = 157519

 Score =  218 bits (110), Expect = 1e-53
 Identities = 206/238 (86%)
 Strand = Plus / Minus

                                                                         
Query: 156   tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
             |||||||||| | ||| || |||||||| || |||||| | | ||| ||| |||||||||
Sbjct: 80053 tgggctggagtggcctatcatgggcgattggaatcctcattgcggctccgatcctcaccc 79994

                                                                         
Query: 216   aggttgcgcaccaccttgacaggggccagtaccagtcgctcatcctcatcgcggcgacgt 275
             ||| ||| |||||||||||| | |||||||| ||||||||||||||||| || ||||| |
Sbjct: 79993 aggctgcacaccaccttgaccgtggccagtatcagtcgctcatcctcattgccgcgacat 79934

                                                                         
Query: 276   cgttcggctcgttcttctgcctgctcactggcttcttcaagacggtctgggtgttcctgt 335
             |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 79933 cgtttggctcattcttctgcctcctcactggcttcttcaagacagtctgggtgttcctct 79874

                                                                       
Query: 336   tctacatcctcttcatcgctgcgtccatcatcattgctgaggctgtgcacacccgcaa 393
             |||||||||| ||||| | ||| ||||||||  |||||||||||||||| || |||||
Sbjct: 79873 tctacatcctgttcattggtgcatccatcattgttgctgaggctgtgcatacacgcaa 79816
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>dbj|AK120464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C12, full
            insert sequence
          Length = 3983

 Score =  218 bits (110), Expect = 1e-53
 Identities = 206/238 (86%)
 Strand = Plus / Plus

                                                                        
Query: 156  tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
            |||||||||| | ||| || |||||||| || |||||| | | ||| ||| |||||||||
Sbjct: 2394 tgggctggagtggcctatcatgggcgattggaatcctcattgcggctccgatcctcaccc 2453

                                                                        
Query: 216  aggttgcgcaccaccttgacaggggccagtaccagtcgctcatcctcatcgcggcgacgt 275
            ||| ||| |||||||||||| | |||||||| ||||||||||||||||| || ||||| |
Sbjct: 2454 aggctgcacaccaccttgaccgtggccagtatcagtcgctcatcctcattgccgcgacat 2513

                                                                        
Query: 276  cgttcggctcgttcttctgcctgctcactggcttcttcaagacggtctgggtgttcctgt 335
            |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 2514 cgtttggctcattcttctgcctcctcactggcttcttcaagacagtctgggtgttcctct 2573

                                                                      
Query: 336  tctacatcctcttcatcgctgcgtccatcatcattgctgaggctgtgcacacccgcaa 393
            |||||||||| ||||| | ||| ||||||||  |||||||||||||||| || |||||
Sbjct: 2574 tctacatcctgttcattggtgcatccatcattgttgctgaggctgtgcatacacgcaa 2631
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>dbj|AK102259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088K01, full
            insert sequence
          Length = 2430

 Score =  218 bits (110), Expect = 1e-53
 Identities = 206/238 (86%)
 Strand = Plus / Plus

                                                                        
Query: 156  tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
            |||||||||| | ||| || |||||||| || |||||| | | ||| ||| |||||||||
Sbjct: 912  tgggctggagtggcctatcatgggcgattggaatcctcattgcggctccgatcctcaccc 971

                                                                        
Query: 216  aggttgcgcaccaccttgacaggggccagtaccagtcgctcatcctcatcgcggcgacgt 275
            ||| ||| |||||||||||| | |||||||| ||||||||||||||||| || ||||| |
Sbjct: 972  aggctgcacaccaccttgaccgtggccagtatcagtcgctcatcctcattgccgcgacat 1031

                                                                        
Query: 276  cgttcggctcgttcttctgcctgctcactggcttcttcaagacggtctgggtgttcctgt 335
            |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 1032 cgtttggctcattcttctgcctcctcactggcttcttcaagacagtctgggtgttcctct 1091

                                                                      
Query: 336  tctacatcctcttcatcgctgcgtccatcatcattgctgaggctgtgcacacccgcaa 393
            |||||||||| ||||| | ||| ||||||||  |||||||||||||||| || |||||
Sbjct: 1092 tctacatcctgttcattggtgcatccatcattgttgctgaggctgtgcatacacgcaa 1149
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>dbj|AK100531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101I10, full
            insert sequence
          Length = 3630

 Score =  218 bits (110), Expect = 1e-53
 Identities = 206/238 (86%)
 Strand = Plus / Plus

                                                                        
Query: 156  tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
            |||||||||| | ||| || |||||||| || |||||| | | ||| ||| |||||||||
Sbjct: 2041 tgggctggagtggcctatcatgggcgattggaatcctcattgcggctccgatcctcaccc 2100

                                                                        
Query: 216  aggttgcgcaccaccttgacaggggccagtaccagtcgctcatcctcatcgcggcgacgt 275
            ||| ||| |||||||||||| | |||||||| ||||||||||||||||| || ||||| |
Sbjct: 2101 aggctgcacaccaccttgaccgtggccagtatcagtcgctcatcctcattgccgcgacat 2160

                                                                        
Query: 276  cgttcggctcgttcttctgcctgctcactggcttcttcaagacggtctgggtgttcctgt 335
            |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 2161 cgtttggctcattcttctgcctcctcactggcttcttcaagacagtctgggtgttcctct 2220

                                                                      
Query: 336  tctacatcctcttcatcgctgcgtccatcatcattgctgaggctgtgcacacccgcaa 393
            |||||||||| ||||| | ||| ||||||||  |||||||||||||||| || |||||
Sbjct: 2221 tctacatcctgttcattggtgcatccatcattgttgctgaggctgtgcatacacgcaa 2278
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>dbj|AK067430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B06, full
           insert sequence
          Length = 2245

 Score =  218 bits (110), Expect = 1e-53
 Identities = 206/238 (86%)
 Strand = Plus / Plus

                                                                       
Query: 156 tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
           |||||||||| | ||| || |||||||| || |||||| | | ||| ||| |||||||||
Sbjct: 749 tgggctggagtggcctatcatgggcgattggaatcctcattgcggctccgatcctcaccc 808

                                                                       
Query: 216 aggttgcgcaccaccttgacaggggccagtaccagtcgctcatcctcatcgcggcgacgt 275
           ||| ||| |||||||||||| | |||||||| ||||||||||||||||| || ||||| |
Sbjct: 809 aggctgcacaccaccttgaccgtggccagtatcagtcgctcatcctcattgccgcgacat 868

                                                                       
Query: 276 cgttcggctcgttcttctgcctgctcactggcttcttcaagacggtctgggtgttcctgt 335
           |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 869 cgtttggctcattcttctgcctcctcactggcttcttcaagacagtctgggtgttcctct 928

                                                                     
Query: 336 tctacatcctcttcatcgctgcgtccatcatcattgctgaggctgtgcacacccgcaa 393
           |||||||||| ||||| | ||| ||||||||  |||||||||||||||| || |||||
Sbjct: 929 tctacatcctgttcattggtgcatccatcattgttgctgaggctgtgcatacacgcaa 986
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>dbj|AK061817.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B07, full
           insert sequence
          Length = 1450

 Score =  218 bits (110), Expect = 1e-53
 Identities = 206/238 (86%)
 Strand = Plus / Plus

                                                                       
Query: 156 tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
           |||||||||| | ||| || |||||||| || |||||| | | ||| ||| |||||||||
Sbjct: 120 tgggctggagtggcctatcatgggcgattggaatcctcattgcggctccgatcctcaccc 179

                                                                       
Query: 216 aggttgcgcaccaccttgacaggggccagtaccagtcgctcatcctcatcgcggcgacgt 275
           ||| ||| |||||||||||| | |||||||| ||||||||||||||||| || ||||| |
Sbjct: 180 aggctgcacaccaccttgaccgtggccagtatcagtcgctcatcctcattgccgcgacat 239

                                                                       
Query: 276 cgttcggctcgttcttctgcctgctcactggcttcttcaagacggtctgggtgttcctgt 335
           |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 240 cgtttggctcattcttctgcctcctcactggcttcttcaagacagtctgggtgttcctct 299

                                                                     
Query: 336 tctacatcctcttcatcgctgcgtccatcatcattgctgaggctgtgcacacccgcaa 393
           |||||||||| ||||| | ||| ||||||||  |||||||||||||||| || |||||
Sbjct: 300 tctacatcctgttcattggtgcatccatcattgttgctgaggctgtgcatacacgcaa 357
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>gb|AY596579.1| Saccharum officinarum clone SCCCCL4004C06, complete sequence
          Length = 2285

 Score =  161 bits (81), Expect = 2e-36
 Identities = 186/221 (84%)
 Strand = Plus / Plus

                                                                       
Query: 176 tgggcgatcggcatcctcctcgtggcgccgctcctcacccaggttgcgcaccaccttgac 235
           ||||| || ||||||||| ||||||||||||||||||| |||  ||| ||||| || |||
Sbjct: 690 tgggcaattggcatcctcatcgtggcgccgctcctcactcagactgctcaccatctcgac 749

                                                                       
Query: 236 aggggccagtaccagtcgctcatcctcatcgcggcgacgtcgttcggctcgttcttctgc 295
            | |||||||| || ||||| |||||||| || || ||||| || || ||||||||||||
Sbjct: 750 cgtggccagtatcaatcgctaatcctcattgctgccacgtcctttgggtcgttcttctgc 809

                                                                       
Query: 296 ctgctcactggcttcttcaagacggtctgggtgttcctgttctacatcctcttcatcgct 355
           |||||||| || |||||||||||||||||||||||||| ||||||||| ||||||| || 
Sbjct: 810 ctgctcacaggtttcttcaagacggtctgggtgttcctattctacatcatcttcattgca 869

                                                    
Query: 356 gcgtccatcatcattgctgaggctgtgcacacccgcaacct 396
           |  || |||||  | || ||||| ||||| |||||||||||
Sbjct: 870 ggctcaatcattgtcgccgaggcagtgcatacccgcaacct 910
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>gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome 5, complete sequence
          Length = 188588

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 322   ctgggtgttcctgttctacat 342
             |||||||||||||||||||||
Sbjct: 92202 ctgggtgttcctgttctacat 92182
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 247     ccagtcgctcatcctcatcgc 267
               |||||||||||||||||||||
Sbjct: 2465925 ccagtcgctcatcctcatcgc 2465905
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>gb|AC096950.2| Homo sapiens chromosome 1 clone RP4-612J11, complete sequence
          Length = 117864

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    cacatattaaaaactactaca 32
             |||||||||||||||||||||
Sbjct: 23789 cacatattaaaaactactaca 23769
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>gb|AC153590.7| Mus musculus 6 BAC RP23-480O11 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 181877

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   ctgcctgctcactggcttctt 312
             |||||||||||||||||||||
Sbjct: 71481 ctgcctgctcactggcttctt 71501
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>gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete sequence
          Length = 205726

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 322  ctgggtgttcctgttctacat 342
            |||||||||||||||||||||
Sbjct: 1652 ctgggtgttcctgttctacat 1632
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>gb|AC171104.1| Drosophila melanogaster clone CH221-06A19, complete sequence
          Length = 125302

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   ttctgcctgctcactggctt 309
             ||||||||||||||||||||
Sbjct: 95176 ttctgcctgctcactggctt 95157
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>gb|AC117949.5| Mus musculus BAC clone RP23-197M6 from chromosome 18, complete sequence
          Length = 196445

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 19     taaaaactactacatcatttttgt 42
              ||||||||||||||| ||||||||
Sbjct: 184970 taaaaactactacataatttttgt 184947
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>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster
          Length = 109528

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   caagacggtctgggtgttcc 332
             ||||||||||||||||||||
Sbjct: 38695 caagacggtctgggtgttcc 38714
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>gb|AC136986.6| Mus musculus chromosome 12, clone RP23-187H12, complete sequence
          Length = 206332

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    ctgccctgctgggggtcaca 77
             ||||||||||||||||||||
Sbjct: 96401 ctgccctgctgggggtcaca 96382
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>gb|AC130389.3| Drosophila melanogaster 3 BAC CH221-6A19 (Children's Hospital Oakland
             Research Institute Drosophila melanogaster sheared DNA BAC
             Library) complete sequence
          Length = 108834

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   ttctgcctgctcactggctt 309
             ||||||||||||||||||||
Sbjct: 78708 ttctgcctgctcactggctt 78689
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>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide
             synthases, ORFs 1 to 5
          Length = 53784

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   caagacggtctgggtgttcc 332
             ||||||||||||||||||||
Sbjct: 22290 caagacggtctgggtgttcc 22309
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>gb|AC105293.2| Drosophila melanogaster 3L BAC RP98-45O17 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 190353

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   ttctgcctgctcactggctt 309
             ||||||||||||||||||||
Sbjct: 64992 ttctgcctgctcactggctt 64973
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>gb|AC093501.4| Drosophila melanogaster 3L BAC RP98-48E9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 173497

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   ttctgcctgctcactggctt 309
             ||||||||||||||||||||
Sbjct: 32684 ttctgcctgctcactggctt 32665
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>gb|AC005957.3| Arabidopsis thaliana chromosome 2 clone T15J14 map mi398, complete
              sequence
          Length = 114041

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     acatattaaaaactactacatcat 36
              |||||||||||| |||||||||||
Sbjct: 105081 acatattaaaaagtactacatcat 105058
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>gb|AC034176.8| Homo sapiens BAC clone RP11-755F5 from 4, complete sequence
          Length = 193100

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      cctacacatattaaaaacta 27
              ||||||||||||||||||||
Sbjct: 121253 cctacacatattaaaaacta 121272
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>gb|AC013477.7| Homo sapiens BAC clone RP11-559F19 from 4, complete sequence
          Length = 182092

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     acatattaaaaactactacatcat 36
              ||||||||||||||| ||||||||
Sbjct: 108415 acatattaaaaactattacatcat 108392
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 274      gtcgttcggctcgttcttct 293
                ||||||||||||||||||||
Sbjct: 33439369 gtcgttcggctcgttcttct 33439350
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>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0054K20
          Length = 153584

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   gtcgttcggctcgttcttct 293
             ||||||||||||||||||||
Sbjct: 14244 gtcgttcggctcgttcttct 14225
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>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1316_E06
          Length = 110197

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   gtcgttcggctcgttcttct 293
             ||||||||||||||||||||
Sbjct: 69988 gtcgttcggctcgttcttct 69969
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>emb|CR382295.10| Zebrafish DNA sequence from clone DKEYP-15G12 in linkage group 4,
             complete sequence
          Length = 74164

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    taaaaactactacatcattt 38
             ||||||||||||||||||||
Sbjct: 69551 taaaaactactacatcattt 69532
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>gb|AY108967.1| Zea mays PCO119014 mRNA sequence
          Length = 1063

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 52/62 (83%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                       
Query: 156 tgggctggagcgccctgtcgtgggcgatcggcatcctcctcgtggcgccgctcctcaccc 215
           |||||||||| |  ||||||||||  ||||| ||| || ||||||||||||| |||| ||
Sbjct: 860 tgggctggagtggactgtcgtggggaatcggnatc-tcatcgtggcgccgctnctcaacc 918

             
Query: 216 ag 217
           ||
Sbjct: 919 ag 920
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>gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 of 83 of the complete
             sequence
          Length = 303512

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   ttctgcctgctcactggctt 309
             ||||||||||||||||||||
Sbjct: 78708 ttctgcctgctcactggctt 78689
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>gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, complete sequence
          Length = 210193

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     taaaaactactacatcatttttgt 42
              ||||||||||||||| ||||||||
Sbjct: 160795 taaaaactactacataatttttgt 160818


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,330,580
Number of Sequences: 3902068
Number of extensions: 3330580
Number of successful extensions: 65140
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 64994
Number of HSP's gapped (non-prelim): 146
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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