ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet33h12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR860222.1| Pongo pygmaeus mRNA; cDNA DKFZp469N2119 (from clone DKFZp469N2119) Length = 2806 Score = 48.1 bits (24), Expect = 0.013 Identities = 24/24 (100%) Strand = Plus / Plus Query: 204 ctccagctccagcgtcagctccgc 227 |||||||||||||||||||||||| Sbjct: 508 ctccagctccagcgtcagctccgc 531
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 gcgagcagccacgcgcgcgcgc 84 |||||||||||||||||||||| Sbjct: 1197148 gcgagcagccacgcgcgcgcgc 1197127 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 ctccgcgagcagcagcagcac 242 ||||||||||||||||||||| Sbjct: 282868 ctccgcgagcagcagcagcac 282888
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 gcgagcagccacgcgcgcgcgc 84 |||||||||||||||||||||| Sbjct: 2318937 gcgagcagccacgcgcgcgcgc 2318958 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 ctccgcgagcagcagcagcac 242 ||||||||||||||||||||| Sbjct: 965149 ctccgcgagcagcagcagcac 965169 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgcccgacgccgcgccggcg 198 |||||||||||||||||||| Sbjct: 2210903 cgcccgacgccgcgccggcg 2210922 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cgagcagccacgcgcgcgcg 83 |||||||||||||||||||| Sbjct: 293714 cgagcagccacgcgcgcgcg 293695
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 gcgagcagccacgcgcgcgcgc 84 |||||||||||||||||||||| Sbjct: 2066154 gcgagcagccacgcgcgcgcgc 2066133 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 ctccgcgagcagcagcagcac 242 ||||||||||||||||||||| Sbjct: 807678 ctccgcgagcagcagcagcac 807698 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cgcccgacgccgcgccggcg 198 |||||||||||||||||||| Sbjct: 2163755 cgcccgacgccgcgccggcg 2163736 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cgagcagccacgcgcgcgcg 83 |||||||||||||||||||| Sbjct: 71005 cgagcagccacgcgcgcgcg 70986
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 gcgagcagccacgcgcgcgcgc 84 |||||||||||||||||||||| Sbjct: 2720231 gcgagcagccacgcgcgcgcgc 2720210 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgcgagcagcagcagcacgg 244 |||||||||||||||||||| Sbjct: 2637844 cgcgagcagcagcagcacgg 2637825 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cgagcagccacgcgcgcgcg 83 |||||||||||||||||||| Sbjct: 68975 cgagcagccacgcgcgcgcg 68956
>gb|AY675303.1| Human adenovirus type 20 polypeptide IX gene, complete cds Length = 402 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 220 agctccgcgagcagcagcagca 241 |||||||||||||||||||||| Sbjct: 371 agctccgcgagcagcagcagca 392
>gb|AF332964.1| Polytomella sp. Pringsheim 198.80 protoporphyrinogen oxidase mRNA, complete cds Length = 2060 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 ccaccacggcgtcctcgtcccc 125 |||||||||||||||||||||| Sbjct: 1201 ccaccacggcgtcctcgtcccc 1180
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 accaccacggcgtcctcgtcc 123 ||||||||||||||||||||| Sbjct: 3610747 accaccacggcgtcctcgtcc 3610767
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 acctccccgacacgcccgacg 187 ||||||||||||||||||||| Sbjct: 1499405 acctccccgacacgcccgacg 1499385
>emb|AL160032.14| Human DNA sequence from clone RP11-474L7 on chromosome 13 Contains the 3' end of the KLF12 gene for Kruppel-like factor 12, a novel gene and the 5' end of a novel gene and a CpG island, complete sequence Length = 181324 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 tctatccagagcttccagcca 60 ||||||||||||||||||||| Sbjct: 30251 tctatccagagcttccagcca 30231
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gcccgacgccgcgccggcgcc 200 ||||||||||||||||||||| Sbjct: 4847568 gcccgacgccgcgccggcgcc 4847548
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tccagcgtcagctccgcgagc 231 ||||||||||||||||||||| Sbjct: 1018411 tccagcgtcagctccgcgagc 1018391
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 cgcgagcagccacgcgcgcgc 82 ||||||||||||||||||||| Sbjct: 3506117 cgcgagcagccacgcgcgcgc 3506137 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 cctccccgacacgcccgacgccgcgccg 195 |||||||| || |||||||||||||||| Sbjct: 2249139 cctccccggcaagcccgacgccgcgccg 2249112
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 cccaccaccacggcgtcctcg 120 ||||||||||||||||||||| Sbjct: 1501733 cccaccaccacggcgtcctcg 1501753
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 cccaccaccacggcgtcctcg 120 ||||||||||||||||||||| Sbjct: 1176393 cccaccaccacggcgtcctcg 1176413
>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene island PAGI-3(SG) Length = 128136 Score = 42.1 bits (21), Expect = 0.80 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 cgctcccaccaccacggcgtcctcg 120 |||||||||| |||||||||||||| Sbjct: 56036 cgctcccaccgccacggcgtcctcg 56012
>gb|AC153380.1| Mus musculus BAC RP23-256G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160046 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atggccgctcccaccaccac 110 |||||||||||||||||||| Sbjct: 2490 atggccgctcccaccaccac 2471
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 116401 cgagcagcagcagcacggct 116382
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 tgctgcagcccgcgccgcacctccccga 176 |||||||||||||||||| ||| ||||| Sbjct: 433506 tgctgcagcccgcgccgcgcctgcccga 433479
>gb|AC146525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0060D22 map near S6115, complete sequence Length = 139929 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 4183 cgagcagcagcagcacggct 4202
>ref|XM_365730.1| Magnaporthe grisea 70-15 hypothetical protein (MG02432.4) partial mRNA Length = 3378 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 gcccgacgccgcgccggcgcccaa 203 |||||| ||||||||||||||||| Sbjct: 459 gcccgaggccgcgccggcgcccaa 482
>ref|NM_174899.3| Homo sapiens F-box protein 36 (FBXO36), mRNA Length = 924 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctccagctccagcgtcagctccgc 227 |||||||||||||| ||||||||| Sbjct: 515 ctccagctccagcggcagctccgc 538
>gb|AC126057.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0026D16, complete sequence Length = 129166 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 24077 cgagcagcagcagcacggct 24096
>gb|AC144453.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0050A24, complete sequence Length = 142574 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 133781 cgagcagcagcagcacggct 133762
>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0025G07, complete sequence Length = 167136 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 57203 cgagcagcagcagcacggct 57184
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 18942141 cgagcagcagcagcacggct 18942122
>ref|XM_387270.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07094.1) partial mRNA Length = 2067 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 aaacctcagagatctcatct 42 |||||||||||||||||||| Sbjct: 1696 aaacctcagagatctcatct 1677
>emb|CT009574.5| Mouse DNA sequence from clone RP23-140H11 on chromosome 17, complete sequence Length = 204822 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaaccaaaacctcagagat 35 |||||||||||||||||||| Sbjct: 174779 aaaaccaaaacctcagagat 174760
>gb|AC145343.3| Homo sapiens chromosome 17, clone XXfos-8207C6, complete sequence Length = 40272 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctccagctccagcgtcagctccgc 227 |||||||||||||| ||||||||| Sbjct: 18147 ctccagctccagcggcagctccgc 18170
>emb|Z82200.1|HS333E23 Human DNA sequence from clone RP3-333E23 on chromosome Xq21.1 Contains the P2RY10 gene for purinergic receptor P2Y G-protein coupled 10, complete sequence Length = 128011 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 tccagctccagcgtcagctc 224 |||||||||||||||||||| Sbjct: 4928 tccagctccagcgtcagctc 4947
>emb|AL512286.6| Human DNA sequence from clone RP11-45J1 on chromosome X Contains a prefoldin 4 (PFDN4) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 91875 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cattagaaaaaccaaaacct 28 |||||||||||||||||||| Sbjct: 33525 cattagaaaaaccaaaacct 33506
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 132104 cgagcagcagcagcacggct 132123
>gb|BC033935.1| Homo sapiens F-box protein 36, mRNA (cDNA clone MGC:41928 IMAGE:5296808), complete cds Length = 924 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctccagctccagcgtcagctccgc 227 |||||||||||||| ||||||||| Sbjct: 515 ctccagctccagcggcagctccgc 538
>gb|BC022538.1| Homo sapiens F-box protein 36, mRNA (cDNA clone MGC:26691 IMAGE:4817261), complete cds Length = 2971 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctccagctccagcgtcagctccgc 227 |||||||||||||| ||||||||| Sbjct: 638 ctccagctccagcggcagctccgc 661
>emb|AL731614.4|OSJN00260 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079F16, complete sequence Length = 157801 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 58763 cgagcagcagcagcacggct 58744
>gb|AY128438.1| Drosophila melanogaster LD09950 full insert cDNA Length = 1894 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccaactccagctccagcgtc 219 |||||||||||||||||||| Sbjct: 1332 ccaactccagctccagcgtc 1351
>gb|AC010688.6| Drosophila melanogaster 3L BAC RP98-11G5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 201313 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccaactccagctccagcgtc 219 |||||||||||||||||||| Sbjct: 26202 ccaactccagctccagcgtc 26183
>dbj|AK123085.1| Homo sapiens cDNA FLJ41090 fis, clone ASTRO2003960 Length = 2281 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctccagctccagcgtcagctccgc 227 |||||||||||||| ||||||||| Sbjct: 827 ctccagctccagcggcagctccgc 850
>emb|CR593898.1| full-length cDNA clone CS0DJ015YN03 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 916 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctccagctccagcgtcagctccgc 227 |||||||||||||| ||||||||| Sbjct: 521 ctccagctccagcggcagctccgc 544
>ref|NM_079393.2| Drosophila melanogaster Mo25 CG4083-RA (Mo25), mRNA Length = 2255 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccaactccagctccagcgtc 219 |||||||||||||||||||| Sbjct: 1355 ccaactccagctccagcgtc 1374
>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0039K08, complete sequence Length = 122163 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 108587 cgagcagcagcagcacggct 108606
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 11890168 cgagcagcagcagcacggct 11890149
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 14240980 cgagcagcagcagcacggct 14240961
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 25796244 cgagcagcagcagcacggct 25796263 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 20825043 cgagcagcagcagcacggct 20825062 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 16251413 cgagcagcagcagcacggct 16251394 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 12371314 cgagcagcagcagcacggct 12371295
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 11443936 cgagcagcagcagcacggct 11443955
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 12180091 cgagcagcagcagcacggct 12180072
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 18936182 cgagcagcagcagcacggct 18936163
>gb|AC135560.4| Oryza sativa chromosome 3 BAC OSJNBa0031I04 genomic sequence, complete sequence Length = 168859 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 57500 cgagcagcagcagcacggct 57519
>gb|AC009973.10| Homo sapiens BAC clone RP11-457P23 from 2, complete sequence Length = 202383 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctccagctccagcgtcagctccgc 227 |||||||||||||| ||||||||| Sbjct: 196821 ctccagctccagcggcagctccgc 196844
>gb|AC151273.2| Mus musculus BAC clone RP24-237J7 from chromosome 17, complete sequence Length = 143288 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 aaaaccaaaacctcagagat 35 |||||||||||||||||||| Sbjct: 9457 aaaaccaaaacctcagagat 9476
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1120F06 Length = 186712 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 7594 cgagcagcagcagcacggct 7613
>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446G09 Length = 146898 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 53456 cgagcagcagcagcacggct 53475
>gb|AF002158.1|GFAF002158 Gomphus floccosus cytochrome oxidase subunit 3 (cox3) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 640 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 aacctccattagaaaaacca 22 |||||||||||||||||||| Sbjct: 52 aacctccattagaaaaacca 33
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete sequence Length = 281100 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccaactccagctccagcgtc 219 |||||||||||||||||||| Sbjct: 30075 ccaactccagctccagcgtc 30056
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 26114914 cgagcagcagcagcacggct 26114933 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 21135278 cgagcagcagcagcacggct 21135297 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 16341395 cgagcagcagcagcacggct 16341376 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 12450621 cgagcagcagcagcacggct 12450602
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 14195260 cgagcagcagcagcacggct 14195241
>emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141067 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgagcagcagcagcacggct 246 |||||||||||||||||||| Sbjct: 36598 cgagcagcagcagcacggct 36579
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cgcccgacgccgcgccggcg 198 |||||||||||||||||||| Sbjct: 985038 cgcccgacgccgcgccggcg 985019
>dbj|AB000402.1| Drosophila melanogaster mRNA for DMO25, complete cds Length = 2213 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccaactccagctccagcgtc 219 |||||||||||||||||||| Sbjct: 1308 ccaactccagctccagcgtc 1327 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,983,939 Number of Sequences: 3902068 Number of extensions: 2983939 Number of successful extensions: 90194 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87915 Number of HSP's gapped (non-prelim): 2279 length of query: 246 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 224 effective length of database: 17,147,199,772 effective search space: 3840972748928 effective search space used: 3840972748928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
