ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet33f11 |
|---|---|
| Clone Library Name | barley_pub |
>YCF23_CYAPA (P31605) Hypothetical 26.6 kDa protein ycf23| Length = 243 Score = 63.5 bits (153), Expect = 2e-10 Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Frame = +2 Query: 245 RENRALKIISGLQNFDRSNVASVVTAADKGGATHVDIACDQDLV-KLALELTNLPICVSS 421 ++ + +K+ISGL NF+ ++V + AA K A+ +DIA LV K+ E+ NLPICVS+ Sbjct: 10 KQKKLIKVISGLNNFNTTHVIKIAKAASKTNASFIDIAAAPKLVEKVKKEVPNLPICVSA 69 Query: 422 VDPSAFQSAVEAGA 463 + P F V+AGA Sbjct: 70 IKPELFVPCVKAGA 83
>YCF23_ANTSP (P46314) Hypothetical 30.3 kDa protein ycf23 (ORF 277)| Length = 277 Score = 62.8 bits (151), Expect = 4e-10 Identities = 27/74 (36%), Positives = 48/74 (64%) Frame = +2 Query: 242 FRENRALKIISGLQNFDRSNVASVVTAADKGGATHVDIACDQDLVKLALELTNLPICVSS 421 F + +A+K+ISG+ NF+ + ++ A + AT+VD+A + +V ++++P+CVSS Sbjct: 12 FIQRKAIKVISGINNFNVGQIFKIIHACEISKATYVDVARNPKIVSFIKSISSIPVCVSS 71 Query: 422 VDPSAFQSAVEAGA 463 +DP A +V AGA Sbjct: 72 IDPRALYESVLAGA 85
>YCF23_CYACA (O19904) Hypothetical 27.4 kDa protein ycf23| Length = 249 Score = 60.1 bits (144), Expect = 3e-09 Identities = 30/81 (37%), Positives = 47/81 (58%) Frame = +2 Query: 221 KDAVLRPFRENRALKIISGLQNFDRSNVASVVTAADKGGATHVDIACDQDLVKLALELTN 400 K VL +A+K+ISGL N + +V ++ A+ + +++DIA D LVK+ N Sbjct: 4 KSQVLLDIANKKAIKVISGLTNLNYEHVLTIARASQRACVSYIDIAADPQLVKVVKANVN 63 Query: 401 LPICVSSVDPSAFQSAVEAGA 463 +PICVS ++ +AV AGA Sbjct: 64 IPICVSGLEIQPIYNAVLAGA 84
>YCF23_PORPU (P51373) Hypothetical 29.1 kDa protein ycf23 (ORF265)| Length = 265 Score = 50.1 bits (118), Expect = 3e-06 Identities = 22/61 (36%), Positives = 38/61 (62%) Frame = +2 Query: 242 FRENRALKIISGLQNFDRSNVASVVTAADKGGATHVDIACDQDLVKLALELTNLPICVSS 421 F + ALK+I+GL NF+ + + A++ T++DI D D++K ++ +PICVS+ Sbjct: 11 FDKQSALKVITGLNNFNIPQIKQMALASEIAKVTYLDIVADTDIIKEVESVSKIPICVSA 70 Query: 422 V 424 V Sbjct: 71 V 71
>ZIM10_MOUSE (Q6P1E1) Retinoic acid-induced protein 17 (PIAS-like protein| Zimp10) Length = 1072 Score = 33.1 bits (74), Expect = 0.36 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 16/113 (14%) Frame = +1 Query: 10 ISTLEPFCTGSVSLSLSPPETFSSK-------NGSAGLPSTSPGAVLRRGQVPAGGHEPG 168 I+ P C+ S + P + ++S+ G A + + A + G P+G P Sbjct: 314 INQYGPVCS---SFQMGPTQAYNSQFMNQPGPRGPASMGGSLNPAGMAAGMTPSGMSGPP 370 Query: 169 SGTGRVRRPCLGGFCRH---------QGRRPQALP*EPCSQDHFGAPEFRQVQ 300 G + R P + F H G RPQ+LP + + + G P + Q Sbjct: 371 MGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQSIKRPYPGEPNYGNQQ 423
>ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing protein 3| Length = 950 Score = 32.3 bits (72), Expect = 0.61 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -3 Query: 200 RHGRRTRPVPLPGSWPPAGTWPRRRTAPGEVLGSP 96 RHGRRT P+PG P+ PR + + G VL P Sbjct: 797 RHGRRTAAPPIPG---PSDGAPRSKASAGHVLRKP 828
>DEOC_MYCLE (Q9CB45) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 226 Score = 32.3 bits (72), Expect = 0.61 Identities = 22/45 (48%), Positives = 26/45 (57%) Frame = +2 Query: 329 KGGATHVDIACDQDLVKLALELTNLPICVSSVDPSAFQSAVEAGA 463 K ATH D+A LV A+EL +CVS PS +AVEAGA Sbjct: 20 KSEATHADVAA---LVAEAVELGVYAVCVS---PSMVPAAVEAGA 58
>AMY2_SCHPO (O42918) Probable alpha-amylase meu7 precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Meiotic expression up-regulated protein 7) Length = 774 Score = 32.3 bits (72), Expect = 0.61 Identities = 24/105 (22%), Positives = 40/105 (38%) Frame = -3 Query: 452 LPQIGMLKDRQMTHRSEG*SAPARALPSPGHMLYQHG*RLPYLRP*RQMQHWTCRNSGAP 273 +P G D + E S P P H P +P + +H +C + P Sbjct: 211 VPHNGTKPDHKPWKHEEHCSCHHDKFPRP----VPHNGTKPDHKPWKHEEHCSCHHDKFP 266 Query: 272 K*S*EHGSHGRA*GRRPWWRQKPPRHGRRTRPVPLPGSWPPAGTW 138 + +G+ +PW ++ HG+ RP+P G+ P W Sbjct: 267 RPVPHNGTKP---DHKPWKHEEHCHHGKFPRPIPHNGTKPDHKPW 308 Score = 29.6 bits (65), Expect = 3.9 Identities = 15/56 (26%), Positives = 26/56 (46%) Frame = -3 Query: 305 QHWTCRNSGAPK*S*EHGSHGRA*GRRPWWRQKPPRHGRRTRPVPLPGSWPPAGTW 138 +H +C + P+ +G+ +PW ++ HG+ RPVP G+ P W Sbjct: 171 EHCSCHHDKFPRPVPHNGTKP---DHKPWKHEEHCHHGKFPRPVPHNGTKPDHKPW 223 Score = 29.3 bits (64), Expect = 5.1 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 Query: 227 RPWWRQKPPRHGRRTRPVPLPGSWPPAGTW 138 +PW ++ HGR RPVP G+ P W Sbjct: 306 KPWKHEEHCHHGRFPRPVPHNGTKPDHKPW 335
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 32.0 bits (71), Expect = 0.79 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +1 Query: 64 PETFSSKNGSAGLPSTSPGAVLRRGQVPAGGHEPGSGTGRVRRPC 198 P+ K+GSAG PS + + R + G P +GR RR C Sbjct: 22 PKAEGDKSGSAGAPSKNSSRLGGRPCMCTAGRRPNRASGRRRRSC 66
>SEC9_ASHGO (Q752V4) Protein transport protein SEC9| Length = 533 Score = 31.6 bits (70), Expect = 1.0 Identities = 18/61 (29%), Positives = 26/61 (42%) Frame = +1 Query: 1 QDSISTLEPFCTGSVSLSLSPPETFSSKNGSAGLPSTSPGAVLRRGQVPAGGHEPGSGTG 180 +D +T +P+ + P + GSA +P PG P GG G+GTG Sbjct: 121 RDPYATAQPYARQAPVRQAGPRHAAGTPYGSAAVPQGGPGN-------PYGGSTAGAGTG 173 Query: 181 R 183 R Sbjct: 174 R 174
>NUOCD_SALTY (P0A1Y6) NADH-quinone oxidoreductase chain C/D (EC 1.6.99.5) (NADH| dehydrogenase I, chain C/D) (NDH-1, chain C/D) Length = 600 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Frame = -1 Query: 295 PVEILEPRNDLESTVLTEGPEDGVLGGGRSRRGTDGEH------GPCRSPAHGHRPALGR 134 P E+ + + DLE LT PED + +RGTD E GP AHG + + Sbjct: 182 PFELTKAKQDLEMEALTFKPEDWGM-----KRGTDNEDFMFLNLGPNHPSAHGAFRIILQ 236 Query: 133 GEGRRLEKC 107 +G + C Sbjct: 237 LDGEEIVDC 245
>NUOCD_SALTI (P0A1Y7) NADH-quinone oxidoreductase chain C/D (EC 1.6.99.5) (NADH| dehydrogenase I, chain C/D) (NDH-1, chain C/D) Length = 600 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Frame = -1 Query: 295 PVEILEPRNDLESTVLTEGPEDGVLGGGRSRRGTDGEH------GPCRSPAHGHRPALGR 134 P E+ + + DLE LT PED + +RGTD E GP AHG + + Sbjct: 182 PFELTKAKQDLEMEALTFKPEDWGM-----KRGTDNEDFMFLNLGPNHPSAHGAFRIILQ 236 Query: 133 GEGRRLEKC 107 +G + C Sbjct: 237 LDGEEIVDC 245
>PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)| Length = 485 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = -3 Query: 194 GRRTRPVPLPGSWPP-AGTWPRRRTAPGEVLGSPAL 90 G R RP P PG PP + WP P +VLG AL Sbjct: 104 GERPRPPP-PGPGPPWSPRWPEAPPPPADVLGDAAL 138
>ZIM10_HUMAN (Q9ULJ6) Retinoic acid-induced protein 17 (PIAS-like protein| Zimp10) Length = 1067 Score = 30.8 bits (68), Expect = 1.8 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 16/98 (16%) Frame = +1 Query: 55 LSPPETFSSK-------NGSAGLPSTSPGAVLRRGQVPAGGHEPGSGTGRVRRPCLGGFC 213 + P + ++S+ G A + + A + G P+G P G + R P + F Sbjct: 320 MGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFG 379 Query: 214 RH---------QGRRPQALP*EPCSQDHFGAPEFRQVQ 300 H G RPQ+LP + + + G P + Q Sbjct: 380 THGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQ 417
>Y483_CHLPN (Q9Z868) Hypothetical protein CPn_0483/CP0271/CPj0483/CpB0503| Length = 1043 Score = 30.8 bits (68), Expect = 1.8 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -3 Query: 212 QKPPRHGRRTRP-VPLPGSWPPAGTWPRRRTAPGEVLGSPALPFLLLKVSGGERDKETEP 36 ++PP+ G +P VP PG+ PP T P AP SPA P KV DK+ P Sbjct: 95 KQPPKDGEDKKPDVPKPGTPPPEDTPPPPPKAP-----SPASP----KVPKQPADKKPTP 145
>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1| light chain LC2] Length = 2774 Score = 30.8 bits (68), Expect = 1.8 Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 5/83 (6%) Frame = -1 Query: 409 DRKVSQLQRELYQVLVTCYINMGSAS---LICGRDDRCNIGPVEILEPRNDLESTVLTEG 239 D QL E L +N+G ++ DD C++ PV I EP S E Sbjct: 1199 DISSKQLSPESLGTLQFGELNLGKEERGPVMKAEDDSCHLAPVSIPEPHRATVSPSTDET 1258 Query: 238 PEDGVLGG--GRSRRGTDGEHGP 176 P + GG S D +H P Sbjct: 1259 PAGTLPGGSFSHSALSVDRKHSP 1281
>LRP1_HHV1F (P17588) Latency-related protein 1| Length = 340 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = -1 Query: 247 TEGP-EDGVLGGGRSRRGTDGEHGPCRSPAHGHRPALGRGEGRR 119 T+GP G GGGR G G GP S G R GRG GRR Sbjct: 283 TDGPARGGGSGGGRGPGG--GRGGPRGSRGRGGRGRGGRGGGRR 324
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 30.4 bits (67), Expect = 2.3 Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 2/114 (1%) Frame = -3 Query: 449 PQIGMLKDRQMTHRSEG*SAPARALPSPGHMLYQHG*RLPYLRP*RQMQHWTCRNSGAPK 270 PQ + + + S G P A+P PG L +P P R P+ Sbjct: 73 PQPSPQQQTKASAPSAGGETPRPAVPKPGPGLKPGPRPVPKPGP---------RPGPRPE 123 Query: 269 *S*EHGSHGRA*GRRPWWRQKP--PRHGRRTRPVPLPGSWPPAGTWPRRRTAPG 114 G G+A G++P Q P P G+ RPVP PG P G P TA G Sbjct: 124 -----GGAGKA-GQQPSGAQGPARPESGKTPRPVPKPG--PRPGNNPFSSTASG 169
>GLUQ_BIFLO (Q8G4X3) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 379 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/68 (29%), Positives = 29/68 (42%) Frame = -1 Query: 313 DRCNIGPVEILEPRNDLESTVLTEGPEDGVLGGGRSRRGTDGEHGPCRSPAHGHRPALGR 134 D ++G +I+ R+ L ST L +L GG + E P + H P + Sbjct: 236 DDLDMGVDDIVRGRDLLRSTALQMWIRQCLLAGGFEPECGNTEKPLAEHPEYAHLPLIDN 295 Query: 133 GEGRRLEK 110 GRRL K Sbjct: 296 AAGRRLAK 303
>POLG_HCVVO (O92531) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3015 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Frame = -1 Query: 307 CNIGPVEI----LEPRNDLESTVLTEGPEDGVLGGGRSRRGTDGEHGPCRSPAHGHRPA 143 CN+ ++ L+P +E+T + P+D V R R G+HG R + G RP+ Sbjct: 1455 CNVSVTQVVDFSLDPTFTIETTTM---PQDAVSRSQRRGRTGRGKHGVYRYVSQGERPS 1510
>EBA1_FLAME (P36911) Endo-beta-N-acetylglucosaminidase F1 precursor (EC| 3.2.1.96) (Mannosyl-glycoprotein endo-beta-N-acetyl-glucosaminidase F1) (Di-N-acetylchitobiosyl beta-N-acetylglucosaminidase F1) (Endoglycosidase F1) Length = 339 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 233 LRPFRENRALKIISGLQNFDRSNVASVVTAADKGGATHVDIACD 364 L+P ++ I+S L N DRS +A++ TA K A + CD Sbjct: 127 LKPLQDKGIKVILSILGNHDRSGIANLSTARAKAFAQELKNTCD 170
>LPXK_DESPS (Q6ALV8) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 348 Score = 30.0 bits (66), Expect = 3.0 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +2 Query: 263 KIISGLQNFDRSNVASVVTAADKGGATHVDIACDQDLVKLALELTNLPI 409 K S Q + + +V A KGGA + I D+DLVK+ T LP+ Sbjct: 275 KAFSDHQQYTGQCIEEIVKEAKKGGAQAI-ITTDKDLVKIDSFATELPL 322
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 30.0 bits (66), Expect = 3.0 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Frame = -3 Query: 206 PPRHGRRTRPVPLP--GSWPPAGTWPRRRTAPGEVLGSPALP 87 PP G RP P P G WPP P PG G P +P Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPP-----PGRTPGPPGMP 314
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 30.0 bits (66), Expect = 3.0 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 244 EGPEDGVLGGGRSRRGTDGEHGPCRSPAHGHRPALGRGEGRR 119 EGP G+ GG R G G G P G +G G G R Sbjct: 774 EGPGGGMGGGHRPHEGPGGGMGGGHRPHEGPGGGMGGGSGHR 815
>LEG9_HUMAN (O00182) Galectin-9 (HOM-HD-21) (Ecalectin)| Length = 355 Score = 30.0 bits (66), Expect = 3.0 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 8/48 (16%) Frame = -3 Query: 206 PPR-HGRRTRPVPLPGSWPPAGTWPRRRT-------APGEVLGSPALP 87 PPR GRR +P PG WP A P +T APG++ +PA+P Sbjct: 171 PPRPRGRRQKP---PGVWP-ANPAPITQTVIHTVQSAPGQMFSTPAIP 214
>ATIN_BHV1P (P30020) Alpha trans-inducing protein (Alpha-TIF)| Length = 504 Score = 30.0 bits (66), Expect = 3.0 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 97 GLPSTSPGAVLRRGQVPAGGHEPGSGTGRVRRPCLG 204 G P+ + G R G G S TGR++RPC G Sbjct: 350 GAPAEAGGGWRRSGSTRTRGRAARSTTGRLQRPCCG 385
>HOL3_HOLDI (Q25055) Holotricin-3 precursor| Length = 104 Score = 29.6 bits (65), Expect = 3.9 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = -1 Query: 259 STVLTEGPEDGVLGGGRSRRGTDGEHGPCRSPAHGHRPALGRGEG 125 ++ + GP DG GG G G HG + HGH P G G G Sbjct: 16 ASAMPYGPGDG--HGGGHGGGHGGGHGNGQGGGHGHGPGGGFGGG 58
>CF155_HUMAN (Q9H8W2) Protein C6orf155| Length = 130 Score = 29.6 bits (65), Expect = 3.9 Identities = 16/56 (28%), Positives = 22/56 (39%) Frame = -3 Query: 182 RPVPLPGSWPPAGTWPRRRTAPGEVLGSPALPFLLLKVSGGERDKETEPVQKGSRV 15 RP P G P+ WP + P + + P + S G RD + SRV Sbjct: 28 RPAPSRGRGAPSLRWPAKEVGPRPQIPATCEPGKVCGASAGRRDAARPSRPRSSRV 83
>SF04_HUMAN (Q8IWZ8) Splicing factor 4 (RNA-binding protein RBP)| Length = 645 Score = 29.6 bits (65), Expect = 3.9 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 191 RRTRPVPLPGSWPPAGTWPRRRTAPGEVLGSPALP 87 R++ P L GS PPA T P T ++ +PA P Sbjct: 336 RKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAP 370
>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) (Low-voltage-activated calcium channel alpha1 3.2 subunit) Length = 2353 Score = 29.6 bits (65), Expect = 3.9 Identities = 23/74 (31%), Positives = 32/74 (43%) Frame = -3 Query: 233 GRRPWWRQKPPRHGRRTRPVPLPGSWPPAGTWPRRRTAPGEVLGSPALPFLLLKVSGGER 54 G P QKPP R + P W P+G W RR++ + +P+L + GER Sbjct: 1111 GDPPLGDQKPPASLRSSPCAP----WGPSGAWSSRRSSWSSLGRAPSLK---RRGQCGER 1163 Query: 53 DKETEPVQKGSRVD 12 + KGS D Sbjct: 1164 ESLLSGEGKGSTDD 1177
>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor B1)| (SAF-B) Length = 931 Score = 29.6 bits (65), Expect = 3.9 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 58 SPPETFSSKNGSAGLPSTSPGAVLRRGQVPAGGHEPGSG 174 S P ++ G +G S +PG RR +P GG + G G Sbjct: 884 SGPGHMMNRGGMSGRGSFAPGGASRRHVIPRGGMQAGFG 922
>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) Length = 559 Score = 29.6 bits (65), Expect = 3.9 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = -3 Query: 206 PPRHGRRTRPVPLPG-SWPPAGTWPRRRTAPG--EVLGSPALPFLLLKVSGGERDKETEP 36 PP R + PV + + PP+G P TAPG L P+ P +L S +R T P Sbjct: 433 PPPGIRPSSPVAVAALAHPPSGLHPAPSTAPGPHAPLMPPSPPSQVLPASEPKRHPSTLP 492 Query: 35 VQKGSRVDML 6 V +R +L Sbjct: 493 VISDARSVLL 502
>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich| proteoglycan 1) Length = 206 Score = 29.3 bits (64), Expect = 5.1 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = -3 Query: 233 GRRPWWRQKPPRHGRRTRPVPLPGSWPPAGTWPRRRTAPGEVLGSP 96 G RP + PP G RP P PP P+ + PG G P Sbjct: 74 GNRP--ERPPPHGGNHQRPPPGHHHGPPPSGGPQTSSQPGNPQGPP 117
>JUND_HUMAN (P17535) Transcription factor jun-D| Length = 347 Score = 29.3 bits (64), Expect = 5.1 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -3 Query: 182 RPVPLPGSWPPAGTWPRRRTAPGEVLGSPALPFLLLKVSGGERDK 48 +P P P S+PPA P +L SP L LLK++ E ++ Sbjct: 63 KPAPAPASYPPAADGAPSAAPPDGLLASPDLG--LLKLASPELER 105
>H6ST3_HUMAN (Q8IZP7) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)| (HS6ST-3) Length = 471 Score = 29.3 bits (64), Expect = 5.1 Identities = 21/59 (35%), Positives = 24/59 (40%) Frame = -3 Query: 212 QKPPRHGRRTRPVPLPGSWPPAGTWPRRRTAPGEVLGSPALPFLLLKVSGGERDKETEP 36 Q PP R +P P PP G PR AP E P P G E ++E EP Sbjct: 59 QAPPEEWERRPQLPPPPRGPPEG--PRGAAAPEEEDEEPGDP-----REGEEEEEEDEP 110
>POLG_HCVVP (O92532) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3014 Score = 29.3 bits (64), Expect = 5.1 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Frame = -1 Query: 307 CNIGPVEI----LEPRNDLESTVLTEGPEDGVLGGGRSRRGTDGEHGPCRSPAHGHRPA 143 CN+ ++ L+P +E+T + P+D V R R G+HG R + G RP+ Sbjct: 1454 CNVTVTQVVDFSLDPTFTIETTTV---PQDAVSRSQRRGRTGRGKHGVYRYVSQGERPS 1509
>Y2251_LISIN (Q929M4) Hypothetical UPF0324 membrane protein lin2251| Length = 335 Score = 29.3 bits (64), Expect = 5.1 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 302 VASVVTAADKGGATHVDIACDQDLVKLALELTNLPIC 412 +A V+ AAD GG++ VD+A +VKL +P+C Sbjct: 196 IAHVIAAADPGGSSAVDMAV---IVKLTRVALLVPVC 229
>Y2179_LISMF (Q71XL9) Hypothetical UPF0324 membrane protein LMOf2365_2179| Length = 335 Score = 29.3 bits (64), Expect = 5.1 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 302 VASVVTAADKGGATHVDIACDQDLVKLALELTNLPIC 412 +A V+ AAD GG++ VD+A +VKL +P+C Sbjct: 196 IAHVIAAADPGGSSAVDMAV---IVKLTRVALLVPVC 229
>Y2147_LISMO (Q8Y5B8) Hypothetical UPF0324 membrane protein lmo2147| Length = 335 Score = 29.3 bits (64), Expect = 5.1 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 302 VASVVTAADKGGATHVDIACDQDLVKLALELTNLPIC 412 +A V+ AAD GG++ VD+A +VKL +P+C Sbjct: 196 IAHVIAAADPGGSSAVDMAV---IVKLTRVALLVPVC 229
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 28.9 bits (63), Expect = 6.7 Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Frame = +1 Query: 61 PPETFSSKNG--SAGLPSTSPGAVLRRGQVPAGGHEPGSGTGRVRRPCLGGFCRHQGRRP 234 PP F G S G P G G V GGH P G G GG + G RP Sbjct: 718 PPPPFRGARGGRSGGGPPNGRGGP-GGGMVGGGGHRPHEGPG-------GGMGNNSGHRP 769 Query: 235 QALP 246 P Sbjct: 770 HEGP 773
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 28.9 bits (63), Expect = 6.7 Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 10/96 (10%) Frame = +1 Query: 25 PFCTGSVSLSLSPPETFSSKNGSAGL----PSTSPGAVLRRGQVPAGGHEPGSGT----- 177 P T S +S +PP+T AG P PG +G GG +PG G Sbjct: 160 PPSTPSSGVSTTPPQTGGPPPPPAGGAGPGPKPGPGPGGPKGGKMPGGPKPGGGPGMGAP 219 Query: 178 -GRVRRPCLGGFCRHQGRRPQALP*EPCSQDHFGAP 282 G + P GG GR+ A P Q H P Sbjct: 220 GGHPKPPHRGGGEPRGGRQHHA----PYHQQHHQGP 251
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +1 Query: 25 PFCTGSVSLSLSPPETFSSKNGSAGLPSTSPGA 123 P + +VS + SPP + + K+GS P+TSP A Sbjct: 187 PKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPA 219
>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit| 4) (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor alpha subunit) (PSE-binding factor alpha Length = 1469 Score = 28.9 bits (63), Expect = 6.7 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 37 GSVSLSLSPPETFSSKNGSAGLPST---SPGAVLRRGQVPAGGHEP 165 G + SLSPP+ S+ G + ST +PG QVPA H P Sbjct: 592 GGPAASLSPPKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGP 637
>RL18_CICAR (O65729) 60S ribosomal protein L18 (Fragment)| Length = 183 Score = 28.9 bits (63), Expect = 6.7 Identities = 19/61 (31%), Positives = 24/61 (39%) Frame = -1 Query: 274 RNDLESTVLTEGPEDGVLGGGRSRRGTDGEHGPCRSPAHGHRPALGRGEGRRLEKC*GAR 95 R L TVL GP++ R GP H H R +GR+ EK G R Sbjct: 125 RLPLTDTVLLRGPKNA--------REAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 176 Query: 94 R 92 + Sbjct: 177 K 177
>PDC6I_RAT (Q9QZA2) Programmed cell death 6-interacting protein| (ALG-2-interacting protein 1) (Fragment) Length = 401 Score = 28.9 bits (63), Expect = 6.7 Identities = 16/42 (38%), Positives = 17/42 (40%) Frame = -3 Query: 212 QKPPRHGRRTRPVPLPGSWPPAGTWPRRRTAPGEVLGSPALP 87 Q P G T P P P + PPA P R P P LP Sbjct: 261 QSSPAGGHATAPTPAPRTMPPAKPQPPARPPP------PVLP 296
>SYD_LISMF (Q71ZF1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 591 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 362 DQDLVKLALELTNLPICVSSVDPSAFQSAVEAG 460 D+ ++ LEL N+ V VD FQSA+E G Sbjct: 288 DKPDIRFGLELVNVSDVVKDVDFKVFQSAIENG 320
>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) (Verprolin homology domain-containing protein 1) Length = 559 Score = 28.9 bits (63), Expect = 6.7 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = -3 Query: 206 PPRHGRRTRPVPLPG-SWPPAGTWPRRRTAPGE--VLGSPALPFLLLKVSGGERDKETEP 36 PP R + PV + + PP+G P TAPG L P+ P ++ S +R T P Sbjct: 433 PPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLP 492 Query: 35 VQKGSRVDML 6 V +R +L Sbjct: 493 VISDARSVLL 502
>AMI3_MYCLE (O33040) Putative amidase amiC (EC 3.5.1.4)| Length = 468 Score = 28.5 bits (62), Expect = 8.7 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Frame = +1 Query: 28 FCTGSVSLSLSPPETFSSKNGSAGLPSTSPGAVLRRGQVPAGGHEPGSGTGRVRRPCLG- 204 F + + L P + +AG S+ GA + G VP G G+ R+ C G Sbjct: 130 FSASAEHMRLGPVRNPWDTDYTAGASSSGSGAFVAAGVVPMAHANDGGGSIRIPASCNGL 189 Query: 205 -GFCRHQGRRP 234 G +GR P Sbjct: 190 VGLKPSRGRLP 200
>MANBA_BOVIN (Q29444) Beta-mannosidase precursor (EC 3.2.1.25) (Lysosomal beta A| mannosidase) (Mannanase) (Mannase) Length = 879 Score = 28.5 bits (62), Expect = 8.7 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +1 Query: 28 FCTGSVSLSLSPPETFSSKNGSAGLPSTSPGAV 126 F T VS+SL S NGS LP+T PG V Sbjct: 16 FATKVVSISLRGNWKIHSGNGSLQLPATVPGCV 48
>MSP1_PLAFW (P04933) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) (P195) Length = 1639 Score = 28.5 bits (62), Expect = 8.7 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 34 TGSVSLSLSPPETFSSKNGSAGLPSTSPGAVLRRGQVPAGGHEPGSGTGRVRR 192 +G+ + +P S +G +G S G+V G V +GG G+G RR Sbjct: 58 SGTAVTTSTPGSKGSVASGGSGGSVASGGSVASGGSVASGGSVASGGSGNSRR 110
>MP2K4_HUMAN (P45985) Dual specificity mitogen-activated protein kinase kinase 4| (EC 2.7.12.2) (MAP kinase kinase 4) (JNK-activating kinase 1) (c-Jun N-terminal kinase kinase 1) (JNKK) (SAPK/ERK kinase 1) (SEK1) Length = 399 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -1 Query: 220 GGGRSRRGTDGEHGPCRSPAHGHRPALGRGEGRR 119 GGG G GP SPA GH PA+ +G+R Sbjct: 9 GGGSGGGSGSGTPGPVGSPAPGH-PAVSSMQGKR 41
>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) Length = 1355 Score = 28.5 bits (62), Expect = 8.7 Identities = 18/63 (28%), Positives = 24/63 (38%) Frame = +1 Query: 55 LSPPETFSSKNGSAGLPSTSPGAVLRRGQVPAGGHEPGSGTGRVRRPCLGGFCRHQGRRP 234 LSP T GSAG+ + GA + G G G G G ++ G R P Sbjct: 33 LSPSRTSEGSAGSAGMGGSGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPSP 92 Query: 235 QAL 243 + Sbjct: 93 SVV 95
>SYD_LISMO (Q8Y709) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 591 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 362 DQDLVKLALELTNLPICVSSVDPSAFQSAVEAG 460 D+ ++ LEL N+ V VD FQSA+E G Sbjct: 288 DKPDIRFGLELQNVSDVVKDVDFKVFQSAIENG 320
>SYD_LISIN (Q92BJ4) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 591 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 362 DQDLVKLALELTNLPICVSSVDPSAFQSAVEAG 460 D+ ++ LEL N+ V VD FQSA+E G Sbjct: 288 DKPDIRFGLELQNVSEVVKDVDFKVFQSAIENG 320
>RL18_ARATH (P42791) 60S ribosomal protein L18| Length = 187 Score = 28.5 bits (62), Expect = 8.7 Identities = 17/57 (29%), Positives = 24/57 (42%) Frame = -1 Query: 262 ESTVLTEGPEDGVLGGGRSRRGTDGEHGPCRSPAHGHRPALGRGEGRRLEKC*GARR 92 ++TVL GP++ R GP H H R +GR+ EK G R+ Sbjct: 133 QNTVLLRGPKNS--------REAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRK 181
>MEF2D_MOUSE (Q63943) Myocyte-specific enhancer factor 2D| Length = 514 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = -3 Query: 215 RQKPPRHGRRTRPVPLPGSWPPAGTWPRRRTAPGEVLGSPA 93 + +P R P P PP +P R PGE L SPA Sbjct: 432 KSEPVSPSRERSPAP-----PPPAVFPAARPEPGEGLSSPA 467 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,772,498 Number of Sequences: 219361 Number of extensions: 1596183 Number of successful extensions: 7311 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 6474 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7287 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
