>YJY1_SCHPO (Q9USN8) Hypothetical protein C132.01c in chromosome III|
          Length = 1021

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 199 NHECIERIV*VPTHHLCIDHFHRETQPEQAEKRSGGAAATGWRR 68
           N +C+E     PT++ C+D F    + ++ +KR+    AT  RR
Sbjct: 328 NRKCME----FPTYNECVDEFFSSIEAQKLKKRAHDRLATAERR 367

>Y211_BRUME (P67516) UPF0247 protein BMEI0211|
          Length = 174

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +2

Query: 137 KMVNAQMVSGYLDNSFNALMVSGGVESGQTQNGGTDTTL--SGWKDLPMELLLRIISVAG 310
           K   AQ +   LDN+      SGG +SG T +GG    L     K L  E    I+    
Sbjct: 56  KAEEAQRIHEALDNA-----KSGGAKSGGTSSGGAALILLDERGKTLGSEAFAAIVGRMR 110

Query: 311 DD--RMVIVACGVCTGWRDAL 367
           DD  R +IVA G   G   AL
Sbjct: 111 DDGKRQLIVAIGGPDGHDPAL 131

>Y1840_BRUSU (P67517) UPF0247 protein BR1840|
          Length = 174

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +2

Query: 137 KMVNAQMVSGYLDNSFNALMVSGGVESGQTQNGGTDTTL--SGWKDLPMELLLRIISVAG 310
           K   AQ +   LDN+      SGG +SG T +GG    L     K L  E    I+    
Sbjct: 56  KAEEAQRIHEALDNA-----KSGGAKSGGTSSGGAALILLDERGKTLGSEAFAAIVGRMR 110

Query: 311 DD--RMVIVACGVCTGWRDAL 367
           DD  R +IVA G   G   AL
Sbjct: 111 DDGKRQLIVAIGGPDGHDPAL 131

>NUOF_BUCAI (P57256) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain F) (NDH-1, chain F)
          Length = 444

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 23/83 (27%)
 Frame = +2

Query: 194 MVSG-GVESGQTQNGGTDTTLSGWKDLPMEL---------LLRIISVAGDDRMVIVA--- 334
           M SG  +++ Q    GTD  L    DLPM+          L   +S+A D++  +V+   
Sbjct: 283 MKSGFSLKAWQPGGAGTDFLLEEHLDLPMDFKNISQAGSRLGTALSMAVDNKTSMVSLVY 342

Query: 335 ----------CGVCTGWRDALGW 373
                     CG+CT  RD L W
Sbjct: 343 NIEKFFSRESCGLCTPCRDGLPW 365

>SAHH3_MOUSE (Q68FL4) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3)
          Length = 613

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 378 APQPSASRHPVQTPQATMTILSSPATDMILRRSSMGRS 265
           AP P+A R P   P +  T   SPA   + + S+M RS
Sbjct: 54  APAPAAERPPAPGPGSGPTAALSPAAGKVPQASAMKRS 91

>PYRD_CANAL (Q874I4) Dihydroorotate dehydrogenase, mitochondrial precursor (EC|
           1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) (DHODase)
           (DHOD)
          Length = 444

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = +2

Query: 263 KDLPMELLLRIISVAGDDRMVIVACGVCTGWRDALGWGATSLSFSWCQDHMNELVISLAH 442
           K L ++ L  +     D  +V++ CG  +  +DAL +G    +F        EL  + A+
Sbjct: 359 KPLSLKALRTLRKYTKDSDLVLIGCGGISNGKDALEFGKAGATFI-------ELYTAFAY 411

Query: 443 KFPKL 457
           K P L
Sbjct: 412 KGPGL 416

>DPOL_ADECC (Q65946) DNA polymerase (EC 2.7.7.7)|
          Length = 1149

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 461 LEALEICGRVISPTHSCGPGTTRRRDLWLPNLVHHA 354
           ++  E CG     TH+C   T RRRD +  ++  H+
Sbjct: 173 MQRCEFCGSFFKVTHTC---TLRRRDFYFHHVASHS 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,482,493
Number of Sequences: 219361
Number of extensions: 1439420
Number of successful extensions: 3795
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3793
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)