>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +1

Query: 181 FVVRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDF 294
           FVVRA+S+PP KQ  NRQLWFASKQSL+YLDG LPGDF
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDF 74

>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 190 RASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDF 294
           R++++     + +R LWF       +LDG+LPGDF
Sbjct: 52  RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDF 86

>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 226 NRQLWFASKQSLTYLDGTLPGDF 294
           +R LWF       +LDG+LPGDF
Sbjct: 64  DRPLWFPGSTPPEWLDGSLPGDF 86

>MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial precursor (EC|
           2.5.1.8) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPP transferase) (IPTase)
           (IPPT) (hGRO1)
          Length = 467

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -3

Query: 291 VTRQRAVEVGEGLLGREPQLPVVILLG-RGAGR 196
           V   RAV VG GL G +  LP+V++LG  G G+
Sbjct: 4   VAAARAVPVGSGLRGLQRTLPLVVILGATGTGK 36

>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 226 NRQLWFASKQSLTYLDGTLPGDF 294
           +R LWF   +S  YLDG+L GD+
Sbjct: 51  DRPLWFPGAKSPEYLDGSLVGDY 73

>SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 1) (GluRS 1)
          Length = 473

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 200 DDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPW 96
           D+    K   REE  + K  C   P SC P  R W
Sbjct: 104 DEVAEKKAKAREEGKIYKHKCTTKPPSCHPSSRHW 138

>OMPY_CHLPN (Q9Z6M5) Putative outer membrane protein|
           CPn_1034/CP0818/CPj1034/CpB1074 precursor
          Length = 262

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 224 SFCLAGGLDDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPWAAIVP 81
           +F L   LDD L   G+       + +  +GL     PE+  W A+VP
Sbjct: 41  NFWLILDLDDTLLQGGEALSHSIWKSKAIQGLQKQGTPEQEAWEAVVP 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.126    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,388,937
Number of Sequences: 219361
Number of extensions: 436377
Number of successful extensions: 870
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)