ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet33b12 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 275 bits (703), Expect = 3e-74 Identities = 130/142 (91%), Positives = 136/142 (95%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPS 180 +S +FAGKAVKNLPSS+L G+ARV MRKTAAK KQV+S SPWYGSDRVLYLGPLSGEPPS Sbjct: 9 SSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPS 68 Query: 181 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 360 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE Sbjct: 69 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 128 Query: 361 AVWFKAGSQIFSEGGLDYLGNP 426 A WFKAGSQIFS+GGLDYLGNP Sbjct: 129 AGWFKAGSQIFSDGGLDYLGNP 150
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 266 bits (679), Expect = 2e-71 Identities = 133/143 (93%), Positives = 135/143 (94%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVA-SGSPWYGSDRVLYLGPLSGEPP 177 +S AFAGKAV N+PSSS FGEARVTMRKTAAK K A SGSPWYG DRVLYLGPLSGEPP Sbjct: 9 SSTAFAGKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPP 66 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 126 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNP 149
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 262 bits (669), Expect = 3e-70 Identities = 132/143 (92%), Positives = 134/143 (93%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVAS-GSPWYGSDRVLYLGPLSGEPP 177 +S AFAGKAV N+PSS LFGEARVTMRKTAAK K AS GSPWYG DRVLYLGPLSGEPP Sbjct: 9 SSTAFAGKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPP 66 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFG Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG 126 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNP 149
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 259 bits (663), Expect = 1e-69 Identities = 125/143 (87%), Positives = 131/143 (91%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SP+FAGKAVK PSSS + G +VTMRKTA+K K V+SGSPWYG DRV YLGP SGE P Sbjct: 9 SSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESP 68 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 69 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 129 EAVWFKAGSQIFSEGGLDYLGNP 151
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 256 bits (655), Expect = 1e-68 Identities = 123/142 (86%), Positives = 130/142 (91%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPS 180 +SPA AGKA ++ +FGE R+TMRK+AAK K ASGSPWYG+DRVLYLGPLSGEPPS Sbjct: 9 SSPALAGKA-----AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPS 63 Query: 181 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 360 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 64 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 123 Query: 361 AVWFKAGSQIFSEGGLDYLGNP 426 AVWFKAGSQIFSEGGLDYLGNP Sbjct: 124 AVWFKAGSQIFSEGGLDYLGNP 145
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 255 bits (652), Expect = 3e-68 Identities = 124/143 (86%), Positives = 127/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +S FAGKAVK PSSS + G RVTMRKTA K K +SGSPWYG DRV YLGP SGE P Sbjct: 9 SSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESP 68 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 69 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 129 EAVWFKAGSQIFSEGGLDYLGNP 151
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 255 bits (651), Expect = 3e-68 Identities = 124/142 (87%), Positives = 128/142 (90%), Gaps = 1/142 (0%) Frame = +1 Query: 4 SPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPS 180 S FAGKAVK PSSS + G +VTMRKTA+K K V+SGSPWYG DRV YLGP SGE PS Sbjct: 9 SSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPS 68 Query: 181 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 360 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE Sbjct: 69 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 128 Query: 361 AVWFKAGSQIFSEGGLDYLGNP 426 AVWFKAGSQIFSEGGLDYLGNP Sbjct: 129 AVWFKAGSQIFSEGGLDYLGNP 150
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 254 bits (648), Expect = 8e-68 Identities = 124/142 (87%), Positives = 127/142 (89%), Gaps = 1/142 (0%) Frame = +1 Query: 4 SPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPS 180 S FAGKAVK PSSS + G +VTMRKTA K K V+SGSPWYG DRV YLGP SGE PS Sbjct: 9 SSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPS 68 Query: 181 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 360 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE Sbjct: 69 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 128 Query: 361 AVWFKAGSQIFSEGGLDYLGNP 426 AVWFKAGSQIFSEGGLDYLGNP Sbjct: 129 AVWFKAGSQIFSEGGLDYLGNP 150 Score = 30.4 bits (67), Expect = 1.8 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = +1 Query: 160 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 339 ++GEP + +D GL+ DPE FA+ + E+ + R AM G L+ Sbjct: 177 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTG 236 Query: 340 NG 345 G Sbjct: 237 KG 238
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 253 bits (647), Expect = 1e-67 Identities = 122/143 (85%), Positives = 128/143 (89%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SP+ AGKAVK P++S + GE R+TMRKTA K K V S SPWYG DRV YLGP SGE P Sbjct: 9 SSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESP 68 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 69 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 129 EAVWFKAGSQIFSEGGLDYLGNP 151
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 253 bits (647), Expect = 1e-67 Identities = 122/143 (85%), Positives = 128/143 (89%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +S +FAGKAVK PSSS + G +VTMRKT K K ++SGSPWYG DRV YLGP SGE P Sbjct: 9 SSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESP 68 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 69 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 129 EAVWFKAGSQIFSEGGLDYLGNP 151
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 253 bits (646), Expect = 1e-67 Identities = 122/143 (85%), Positives = 127/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SP+FAGKAVK PSSS + G + TMRKT K K V+SGSPWYG DRV YLGP SGE P Sbjct: 9 SSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP 68 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 69 SYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 129 EAVWFKAGSQIFSEGGLDYLGNP 151
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 252 bits (644), Expect = 2e-67 Identities = 125/143 (87%), Positives = 129/143 (90%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVAS-GSPWYGSDRVLYLGPLSGEPP 177 +SP A A SS+LFGEAR+TMRKTAAK K AS GSPWYG+DRVLYLGPLSGEPP Sbjct: 9 SSPVMARAAPST--SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPP 66 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFG Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG 126 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNP 149
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 252 bits (643), Expect = 3e-67 Identities = 121/143 (84%), Positives = 126/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SP+FAG AVK PSSS + G + MRKT K K V+SGSPWYG DRV YLGP SGE P Sbjct: 9 SSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP 68 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 69 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 129 EAVWFKAGSQIFSEGGLDYLGNP 151
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 251 bits (641), Expect = 5e-67 Identities = 123/143 (86%), Positives = 127/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SPAFAGKAVK P +S +FG RVTMRKT SGSPWYGSDRV YLGP SGEPP Sbjct: 9 SSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPP 66 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 126 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNP 149
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 249 bits (637), Expect = 1e-66 Identities = 120/143 (83%), Positives = 128/143 (89%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +S +FAGKAVK PSSS + G +VTMRKTA+K K V+S SPWYG +RV YLGP SGE P Sbjct: 9 SSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESP 68 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 69 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFK GSQIFS+GGLDYLGNP Sbjct: 129 EAVWFKGGSQIFSQGGLDYLGNP 151 Score = 29.6 bits (65), Expect = 3.1 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +1 Query: 160 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 339 ++GEP + +D GL+ DPE FA+ + E+ + R AM G ++ Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237 Query: 340 NG 345 G Sbjct: 238 KG 239
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 249 bits (637), Expect = 1e-66 Identities = 121/143 (84%), Positives = 127/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +S +FAGKAV N+PSSS + G + TMRKT K K V+SGSPWYG DRV YLGP SGE P Sbjct: 9 SSSSFAGKAV-NVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP 67 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFG Sbjct: 68 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG 127 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 128 EAVWFKAGSQIFSEGGLDYLGNP 150
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 249 bits (635), Expect = 2e-66 Identities = 120/143 (83%), Positives = 124/143 (86%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +S FAGK VK PSSS + G + TMRKTA K K V+SGSPWYG DRV YLGP SGE P Sbjct: 9 SSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAP 68 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFG Sbjct: 69 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG 128 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVW KAGSQIFSEGGLDYLGNP Sbjct: 129 EAVWLKAGSQIFSEGGLDYLGNP 151
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 247 bits (631), Expect = 7e-66 Identities = 122/143 (85%), Positives = 128/143 (89%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SPAFAGKAVK P++S + G RVTMRKT AK K SGSPWYGSDRV YLGP SGE P Sbjct: 9 SSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESP 67 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFG Sbjct: 68 SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG 127 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFS+GGLDYLGNP Sbjct: 128 EAVWFKAGSQIFSDGGLDYLGNP 150
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 246 bits (629), Expect = 1e-65 Identities = 121/143 (84%), Positives = 127/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSS-SLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SP+FAG+AVK PS+ + G RV+MRKT AK VAS SPWYG DRV YLGP SGE P Sbjct: 9 SSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAK--PVASSSPWYGPDRVKYLGPFSGESP 66 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 126 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNP 149
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 245 bits (626), Expect = 3e-65 Identities = 121/143 (84%), Positives = 127/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SPAFAGKAV P++S + G RVTMRKT AK K SGSPWYGSDRV YLGP SGE P Sbjct: 9 SSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESP 67 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFG Sbjct: 68 SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG 127 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFS+GGLDYLGNP Sbjct: 128 EAVWFKAGSQIFSDGGLDYLGNP 150
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 245 bits (626), Expect = 3e-65 Identities = 123/143 (86%), Positives = 125/143 (87%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SPA AGKAVK PSSS LFG RV+MRKT VK S SPWYG DRV YLGP SGE P Sbjct: 9 SSPALAGKAVKVAPSSSELFGNGRVSMRKT---VKAPVSDSPWYGPDRVKYLGPFSGEAP 65 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFG Sbjct: 66 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG 125 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 126 EAVWFKAGSQIFSEGGLDYLGNP 148
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 244 bits (623), Expect = 6e-65 Identities = 119/143 (83%), Positives = 125/143 (87%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +SP+FAG+AVK PS+S + G R+TMRK AK S SPWYG DRV YLGP SGE P Sbjct: 9 SSPSFAGQAVKLSPSASEISGNGRITMRKAVAK--SAPSSSPWYGPDRVKYLGPFSGESP 66 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 126 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIFSEGGLDYLGNP Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNP 149
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 243 bits (619), Expect = 2e-64 Identities = 116/142 (81%), Positives = 122/142 (85%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPS 180 +SP AGK +K PSS G AR TMRK+A K +SGSPWYG DRV YLGP SGE PS Sbjct: 12 SSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPS 71 Query: 181 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 360 YLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGE Sbjct: 72 YLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 131 Query: 361 AVWFKAGSQIFSEGGLDYLGNP 426 AVWFKAGSQIFSEGGLDYLGNP Sbjct: 132 AVWFKAGSQIFSEGGLDYLGNP 153
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 243 bits (619), Expect = 2e-64 Identities = 120/142 (84%), Positives = 126/142 (88%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPS 180 +SP+ AGKAVK PS+ G RV+MRKT K QV+SGSPWYG DRV YLGP SGEPPS Sbjct: 10 SSPSLAGKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKYLGPFSGEPPS 65 Query: 181 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 360 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGE Sbjct: 66 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 125 Query: 361 AVWFKAGSQIFSEGGLDYLGNP 426 AVWFKAGSQIFSEGGLDYLGNP Sbjct: 126 AVWFKAGSQIFSEGGLDYLGNP 147
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 242 bits (618), Expect = 2e-64 Identities = 116/143 (81%), Positives = 123/143 (86%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +S +FAGKAVK SSS + G +VTMRKT K K +S SPWYG DRV YLGP SGE P Sbjct: 9 SSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAP 68 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFG Sbjct: 69 SYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG 128 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAG+QIFSEGGLDYLGNP Sbjct: 129 EAVWFKAGAQIFSEGGLDYLGNP 151
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 242 bits (618), Expect = 2e-64 Identities = 117/142 (82%), Positives = 121/142 (85%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPS 180 +S A AG +K FGE R+TMRKT K K ASGSPWYG DRV YLGP SGEPPS Sbjct: 9 SSTAMAGTPIK----VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPS 64 Query: 181 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 360 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGE Sbjct: 65 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 124 Query: 361 AVWFKAGSQIFSEGGLDYLGNP 426 AVWFKAGSQIFSEGGLDYLGNP Sbjct: 125 AVWFKAGSQIFSEGGLDYLGNP 146
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 241 bits (615), Expect = 5e-64 Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +S +FAGKAV N+PSSS + +VTMRKT K K V+SGSPWYG DRV YLGP SGE P Sbjct: 9 SSSSFAGKAV-NVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP 67 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNGVKFG Sbjct: 68 SYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG 127 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFKAGSQIF EGGLDYLGNP Sbjct: 128 EAVWFKAGSQIFKEGGLDYLGNP 150
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 240 bits (613), Expect = 9e-64 Identities = 117/141 (82%), Positives = 125/141 (88%), Gaps = 1/141 (0%) Frame = +1 Query: 7 PAFAGKAVKNLPSS-SLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSY 183 P AG+AVK P++ + G A+ TMRKTA+K V+SGSPWYG DRV YLGP SGEPPSY Sbjct: 1 PTLAGQAVKLSPNAPEIQGNAKFTMRKTASK--SVSSGSPWYGPDRVKYLGPFSGEPPSY 58 Query: 184 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 363 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEA Sbjct: 59 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 118 Query: 364 VWFKAGSQIFSEGGLDYLGNP 426 VWFKAGSQIFSEGGLDYLGNP Sbjct: 119 VWFKAGSQIFSEGGLDYLGNP 139
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 240 bits (612), Expect = 1e-63 Identities = 121/143 (84%), Positives = 125/143 (87%), Gaps = 1/143 (0%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPP 177 +S FAGKAVKNL SSS + G+ARV+MRKTAA K GSPWYG DRV YLGP SGE P Sbjct: 9 SSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESP 65 Query: 178 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 357 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFG Sbjct: 66 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFG 125 Query: 358 EAVWFKAGSQIFSEGGLDYLGNP 426 EAVWFK GSQIFSEGGL YLGNP Sbjct: 126 EAVWFKKGSQIFSEGGLQYLGNP 148
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 237 bits (604), Expect = 1e-62 Identities = 115/144 (79%), Positives = 121/144 (84%), Gaps = 2/144 (1%) Frame = +1 Query: 1 ASPAFAGKAVKNL--PSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEP 174 +SP GK V+ PSS G AR TMRK+A K +SGSPWYG DRV YLGP SGE Sbjct: 9 SSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGES 68 Query: 175 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 354 PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKF Sbjct: 69 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 128 Query: 355 GEAVWFKAGSQIFSEGGLDYLGNP 426 GEAVWFKAGSQIFSEGGLDYLGNP Sbjct: 129 GEAVWFKAGSQIFSEGGLDYLGNP 152
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 237 bits (604), Expect = 1e-62 Identities = 118/151 (78%), Positives = 124/151 (82%), Gaps = 10/151 (6%) Frame = +1 Query: 4 SPAFAGKAVKNLP---------SSSLFGEARVTMRK-TAAKVKQVASGSPWYGSDRVLYL 153 S AFAG + +L + + GEARVTMRK T K+ AS SPWYG DRVLYL Sbjct: 8 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYL 67 Query: 154 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 333 GP SGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 68 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELL 127 Query: 334 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 426 ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNP Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 158
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 233 bits (594), Expect = 1e-61 Identities = 111/145 (76%), Positives = 121/145 (83%), Gaps = 3/145 (2%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS---LFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGE 171 A+ A +A+ P++ +FGE R+TMRKTAAK K SGSPWYG+DRVLYLGPLSG Sbjct: 4 ATMAITSRALVGKPAAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGS 63 Query: 172 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 351 PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELLARNGVK Sbjct: 64 PPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVK 123 Query: 352 FGEAVWFKAGSQIFSEGGLDYLGNP 426 FGE VWFKAGSQIFSEGGL + GNP Sbjct: 124 FGEGVWFKAGSQIFSEGGLSHPGNP 148
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 231 bits (588), Expect = 7e-61 Identities = 111/128 (86%), Positives = 115/128 (89%) Frame = +1 Query: 40 PSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 219 PS+ G RV+MRKTA+K V+SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWD Sbjct: 3 PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60 Query: 220 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 399 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAGSQIFSE Sbjct: 61 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSE 120 Query: 400 GGLDYLGN 423 GGLDYLGN Sbjct: 121 GGLDYLGN 128
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 228 bits (581), Expect = 5e-60 Identities = 109/124 (87%), Positives = 112/124 (90%), Gaps = 1/124 (0%) Frame = +1 Query: 58 GEARVTMRKTAAKVKQVAS-GSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 234 GEAR+TMRK K AS SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 235 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 414 ADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDY Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 158 Query: 415 LGNP 426 LG+P Sbjct: 159 LGSP 162
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 226 bits (576), Expect = 2e-59 Identities = 107/124 (86%), Positives = 112/124 (90%), Gaps = 1/124 (0%) Frame = +1 Query: 58 GEARVTMRKTAAKVKQVAS-GSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 234 GEAR+TMRK + AS SPWYG DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 235 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 414 ADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDY Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 158 Query: 415 LGNP 426 LG+P Sbjct: 159 LGSP 162
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 216 bits (551), Expect = 1e-56 Identities = 105/144 (72%), Positives = 115/144 (79%), Gaps = 5/144 (3%) Frame = +1 Query: 10 AFAGKAVKNLPSSSL-----FGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEP 174 AF G+AV + + FGE R+TMR+T Q S WYG DR YLGP S + Sbjct: 10 AFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQT 65 Query: 175 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 354 PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKF Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKF 125 Query: 355 GEAVWFKAGSQIFSEGGLDYLGNP 426 GEAVWFKAGSQIFSEGGLDYLGNP Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNP 149
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 214 bits (545), Expect = 7e-56 Identities = 106/135 (78%), Positives = 110/135 (81%) Frame = +1 Query: 22 KAVKNLPSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFP 201 K V L GEARV M +K SGS WYGSDR LYLGP SG PPSYL+GEFP Sbjct: 18 KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74 Query: 202 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 381 GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG Sbjct: 75 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 134 Query: 382 SQIFSEGGLDYLGNP 426 SQIF+EGGLDYLGNP Sbjct: 135 SQIFAEGGLDYLGNP 149
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 209 bits (533), Expect = 2e-54 Identities = 108/142 (76%), Positives = 115/142 (80%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPS 180 +S + AG+A+K PS+ G RV+MRKTA K V+SGSPWYG DRV YLGP SGE PS Sbjct: 9 SSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPS 66 Query: 181 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 360 YLTGEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 67 YLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 118 Query: 361 AVWFKAGSQIFSEGGLDYLGNP 426 AVWFKAGSQIFSEGGLDYLGNP Sbjct: 119 AVWFKAGSQIFSEGGLDYLGNP 140
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 209 bits (531), Expect = 3e-54 Identities = 97/109 (88%), Positives = 100/109 (91%) Frame = +1 Query: 100 KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 279 K +S SPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 280 HCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 426 H RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNP Sbjct: 64 HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 112
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 208 bits (530), Expect = 4e-54 Identities = 98/124 (79%), Positives = 104/124 (83%) Frame = +1 Query: 55 FGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 234 FG R TMR+T Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 235 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 414 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSEGGLDY Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDY 145 Query: 415 LGNP 426 LGNP Sbjct: 146 LGNP 149
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 208 bits (530), Expect = 4e-54 Identities = 98/124 (79%), Positives = 104/124 (83%) Frame = +1 Query: 55 FGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 234 F R TMR+T Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FNGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 235 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 414 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDY Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDY 145 Query: 415 LGNP 426 LGNP Sbjct: 146 LGNP 149
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 207 bits (528), Expect = 6e-54 Identities = 99/123 (80%), Positives = 105/123 (85%) Frame = +1 Query: 58 GEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 237 G RV+MR+T A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSA Sbjct: 31 GGGRVSMRRTVKS----APTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86 Query: 238 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 417 DPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDYL Sbjct: 87 DPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYL 146 Query: 418 GNP 426 GNP Sbjct: 147 GNP 149
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 207 bits (527), Expect = 8e-54 Identities = 104/144 (72%), Positives = 113/144 (78%), Gaps = 5/144 (3%) Frame = +1 Query: 10 AFAGKAVKNLPSSSLFGEA-----RVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEP 174 AFAG+ + P + L + RV+MR+T + S WYG DR YLGP S + Sbjct: 10 AFAGQTLLK-PQNELVRKVGGNGGRVSMRRTIKSAPE----SIWYGPDRPKYLGPFSEQT 64 Query: 175 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 354 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKF Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKF 124 Query: 355 GEAVWFKAGSQIFSEGGLDYLGNP 426 GEAVWFKAGSQIF EGGLDYLGNP Sbjct: 125 GEAVWFKAGSQIFQEGGLDYLGNP 148
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 207 bits (526), Expect = 1e-53 Identities = 98/124 (79%), Positives = 104/124 (83%) Frame = +1 Query: 55 FGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 234 F RVTMR+T Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 235 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 414 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSEGGLDY Sbjct: 58 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDY 117 Query: 415 LGNP 426 LGNP Sbjct: 118 LGNP 121
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 204 bits (520), Expect = 5e-53 Identities = 97/124 (78%), Positives = 104/124 (83%) Frame = +1 Query: 55 FGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 234 FG+AR TMR+T + S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGQARFTMRRTVKSAPE----SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85 Query: 235 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 414 ADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAGSQIF+EGGLDY Sbjct: 86 ADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDY 145 Query: 415 LGNP 426 LGNP Sbjct: 146 LGNP 149
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 202 bits (515), Expect = 2e-52 Identities = 95/122 (77%), Positives = 103/122 (84%) Frame = +1 Query: 61 EARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 +AR+TMR+T + S WYG DR YLGP S PSYLTGEFPGDYGWDTA +SAD Sbjct: 33 QARITMRRTVRSAPE----SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88 Query: 241 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 420 PETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAG+QIFSEGGLDY G Sbjct: 89 PETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAG 148 Query: 421 NP 426 NP Sbjct: 149 NP 150
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 202 bits (515), Expect = 2e-52 Identities = 95/120 (79%), Positives = 103/120 (85%) Frame = +1 Query: 67 RVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 246 R+TMR+T Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 247 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 426 TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 147 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 196 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 345 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 202 bits (514), Expect = 3e-52 Identities = 102/146 (69%), Positives = 117/146 (80%), Gaps = 5/146 (3%) Frame = +1 Query: 4 SPAFAGKAVK---NLPSSSLFG--EARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSG 168 S A AG+++ N S + G EARVTMR+T +K S + WYG+DR +LGP SG Sbjct: 9 STALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSK--SAGSDTIWYGADRPKFLGPFSG 66 Query: 169 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 348 E PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GV Sbjct: 67 ETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGV 126 Query: 349 KFGEAVWFKAGSQIFSEGGLDYLGNP 426 KFGEAVWFKAG+QIFSEGGLDYLGNP Sbjct: 127 KFGEAVWFKAGAQIFSEGGLDYLGNP 152 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 196 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 345 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 201 bits (512), Expect = 5e-52 Identities = 100/145 (68%), Positives = 112/145 (77%), Gaps = 4/145 (2%) Frame = +1 Query: 4 SPAFAGKAV----KNLPSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGE 171 S AFAG+ L + R +MR+T V Q S WYG+DR +LGP S + Sbjct: 8 SSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQ----SIWYGADRPKFLGPFSEQ 63 Query: 172 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 351 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+ Sbjct: 64 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQ 123 Query: 352 FGEAVWFKAGSQIFSEGGLDYLGNP 426 FGEAVWFKAG+QIFSEGGLDYLGNP Sbjct: 124 FGEAVWFKAGAQIFSEGGLDYLGNP 148
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 186 bits (473), Expect = 2e-47 Identities = 86/90 (95%), Positives = 87/90 (96%) Frame = +1 Query: 157 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 336 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 337 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 426 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNP Sbjct: 61 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 90
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 177 bits (449), Expect = 9e-45 Identities = 87/122 (71%), Positives = 99/122 (81%), Gaps = 2/122 (1%) Frame = +1 Query: 67 RVTMRKTAAKVKQV-ASGSPWYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSAD 240 + T +KTAAK +SG +YG +R +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 16 KATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSAD 75 Query: 241 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 420 PETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAG+QIFSEGGLDYLG Sbjct: 76 PETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLG 135 Query: 421 NP 426 NP Sbjct: 136 NP 137 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 196 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 345 +PG+ +D GL+ DP+TFA+ + E+ + R A G ++ G Sbjct: 177 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKG 225
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 177 bits (448), Expect = 1e-44 Identities = 83/102 (81%), Positives = 88/102 (86%), Gaps = 1/102 (0%) Frame = +1 Query: 124 WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 303 WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG Sbjct: 50 WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109 Query: 304 ALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNP 426 ALGCVFPE+L + GV+F E VWFKAGSQIFSEGGLDYLGNP Sbjct: 110 ALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151 Score = 30.8 bits (68), Expect = 1.4 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +1 Query: 196 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 345 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 175 bits (443), Expect = 5e-44 Identities = 93/128 (72%), Positives = 98/128 (76%) Frame = +1 Query: 43 SSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 222 SS+L A TM K AAK K +S RV YLGP SGE PSYLTGEFPGDYGWDT Sbjct: 30 SSTLIVTAGFTMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85 Query: 223 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 402 AGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAG+QIFSEG Sbjct: 86 AGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEG 145 Query: 403 GLDYLGNP 426 GLDYLGNP Sbjct: 146 GLDYLGNP 153
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 174 bits (440), Expect = 1e-43 Identities = 87/124 (70%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Frame = +1 Query: 58 GEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 237 G AR TM S WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSA Sbjct: 36 GSARFTM-----------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSA 84 Query: 238 DPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDY 414 DPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAGSQIFS+GGLDY Sbjct: 85 DPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDY 144 Query: 415 LGNP 426 LGNP Sbjct: 145 LGNP 148 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +1 Query: 196 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 345 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 172 bits (435), Expect = 4e-43 Identities = 86/127 (67%), Positives = 96/127 (75%), Gaps = 7/127 (5%) Frame = +1 Query: 67 RVTMRKTAAKVKQV------ASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAG 228 +V K AA KQ ++G WYG DR +LGP S P+YLTGEFPGDYGWDTAG Sbjct: 14 KVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAG 73 Query: 229 LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGG 405 LSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAG+QIFSEGG Sbjct: 74 LSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGG 133 Query: 406 LDYLGNP 426 LDYLG+P Sbjct: 134 LDYLGSP 140 Score = 30.8 bits (68), Expect = 1.4 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +1 Query: 196 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 345 +PG+ +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 153 bits (387), Expect = 1e-37 Identities = 76/121 (62%), Positives = 95/121 (78%), Gaps = 2/121 (1%) Frame = +1 Query: 67 RVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 243 R T ++ A V + A +YG DR +LGP S + P YLTGEFPGDYGWDTAGLSADP Sbjct: 16 RQTRQQRMATVPRAAV--EFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADP 73 Query: 244 ETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLG 420 +TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAG+QIF++GGL+YLG Sbjct: 74 QTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLG 133 Query: 421 N 423 N Sbjct: 134 N 134 Score = 30.4 bits (67), Expect = 1.8 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 196 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 345 +PG +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 131 bits (330), Expect = 6e-31 Identities = 72/126 (57%), Positives = 88/126 (69%), Gaps = 3/126 (2%) Frame = +1 Query: 58 GEARVTMRKTAAKV-KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 234 G A + +K A V K +S + +YG D L + P TGEFPGDYGWDTAGLS Sbjct: 34 GRAGKSTKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLS 92 Query: 235 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGSQIFSEGGL 408 ADPETF + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAG+ IF +GGL Sbjct: 93 ADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGL 152 Query: 409 DYLGNP 426 +YLGNP Sbjct: 153 NYLGNP 158 Score = 32.3 bits (72), Expect = 0.48 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +1 Query: 196 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 345 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 100 bits (249), Expect = 1e-21 Identities = 56/128 (43%), Positives = 72/128 (56%), Gaps = 4/128 (3%) Frame = +1 Query: 49 SLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWD 219 +LF + + K+ A + + WYG DR ++L G L E P YL GE GDYG+D Sbjct: 37 ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96 Query: 220 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFS 396 GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK G+ + Sbjct: 97 PFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLD 156 Query: 397 EGGLDYLG 420 L+Y G Sbjct: 157 GNTLNYFG 164
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 82.0 bits (201), Expect = 5e-16 Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 1/124 (0%) Frame = +1 Query: 19 GKAVKNLPSSSLFGEA-RVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGE 195 G V +S L G RV+ T + + DR L+ PP +L G Sbjct: 24 GSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGS 81 Query: 196 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 375 PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + G+ W+ Sbjct: 82 LPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYT 140 Query: 376 AGSQ 387 AG Q Sbjct: 141 AGEQ 144
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 79.0 bits (193), Expect = 4e-15 Identities = 45/116 (38%), Positives = 61/116 (52%), Gaps = 2/116 (1%) Frame = +1 Query: 46 SSLFGEARVTMRKTAAKV--KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 219 +S G R+ + K A V + VA + DR L+ PP +L G PGD+G+D Sbjct: 32 ASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFD 89 Query: 220 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 387 GL +DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Q Sbjct: 90 PLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQ 144
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 75.1 bits (183), Expect = 6e-14 Identities = 35/76 (46%), Positives = 48/76 (63%) Frame = +1 Query: 163 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 342 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL--- 249 Query: 343 GVKFGEAVWFKAGSQI 390 G+ WF+AG + Sbjct: 250 ----GKGAWFEAGDSV 261 Score = 72.4 bits (176), Expect = 4e-13 Identities = 35/73 (47%), Positives = 45/73 (61%) Frame = +1 Query: 172 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 351 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 433 Query: 352 FGEAVWFKAGSQI 390 G WF+ ++ Sbjct: 434 -GNGAWFQIWDKV 445 Score = 63.9 bits (154), Expect = 1e-10 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +1 Query: 175 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 354 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64 Query: 355 GEAVWFKA 378 G+ +W++A Sbjct: 65 GKGIWYEA 72
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 70.1 bits (170), Expect = 2e-12 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = +1 Query: 325 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 426 ELL +NGVKFGEAVWFKAG+QIFSEGGLDYLGNP Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 34
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 69.3 bits (168), Expect = 4e-12 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 2/91 (2%) Frame = +1 Query: 160 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 336 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL- 108 Query: 337 RNGVKFGEAVWFKAGSQIFSEGG-LDYLGNP 426 G W KA GG YLG P Sbjct: 109 ------GLGNWVKAQEWAAIPGGQATYLGQP 133
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 67.8 bits (164), Expect = 1e-11 Identities = 30/74 (40%), Positives = 46/74 (62%) Frame = +1 Query: 169 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 348 +PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 221 Query: 349 KFGEAVWFKAGSQI 390 G+ WF+ G+ + Sbjct: 222 --GKGAWFEVGNSV 233 Score = 38.5 bits (88), Expect = 0.007 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +1 Query: 241 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 390 P + + R EV + R AML +GCV+PELL G VWF+ +++ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFEVWNKV 43
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 60.1 bits (144), Expect = 2e-09 Identities = 28/71 (39%), Positives = 40/71 (56%) Frame = +1 Query: 175 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 354 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-I 122 Query: 355 GEAVWFKAGSQ 387 W+ AG + Sbjct: 123 NVPEWYDAGKE 133
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 58.2 bits (139), Expect = 8e-09 Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Frame = +1 Query: 43 SSSLFGEARVTMRKTAAK-VKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 219 S S+ +A +R + VKQ A+ W+ S + L SYL G PGD+G+D Sbjct: 28 SQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSL----------SYLDGRLPGDFGFD 77 Query: 220 TAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFK 375 GLS DPE F + + L EVI+ R+AMLGA G + PE+L + G+ E WF+ Sbjct: 78 PLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQ 136 Query: 376 AG 381 G Sbjct: 137 TG 138
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 55.8 bits (133), Expect = 4e-08 Identities = 30/70 (42%), Positives = 38/70 (54%) Frame = +1 Query: 175 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 354 P +L G PGD+G+D GL DP RE E+IH RWAML LG + A G+ Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQ--AWTGIP- 129 Query: 355 GEAVWFKAGS 384 WF+AG+ Sbjct: 130 ----WFEAGA 135
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 55.8 bits (133), Expect = 4e-08 Identities = 29/70 (41%), Positives = 35/70 (50%) Frame = +1 Query: 175 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 354 P +L G PGDYG+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 355 GEAVWFKAGS 384 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/70 (40%), Positives = 35/70 (50%) Frame = +1 Query: 175 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 354 P +L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 355 GEAVWFKAGS 384 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 53.5 bits (127), Expect = 2e-07 Identities = 28/43 (65%), Positives = 32/43 (74%), Gaps = 1/43 (2%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPW 126 +S FAGKAVK PSSS + G R+TMRKTAAK K +SGSPW Sbjct: 9 SSSTFAGKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 52.4 bits (124), Expect = 4e-07 Identities = 27/43 (62%), Positives = 31/43 (72%), Gaps = 1/43 (2%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPW 126 +S FAGK VK PSSS + G R+TMRKTAAK K +SGSPW Sbjct: 9 SSSTFAGKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 43.9 bits (102), Expect = 2e-04 Identities = 53/189 (28%), Positives = 65/189 (34%), Gaps = 47/189 (24%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSSLFGEARV---TMRKTAAKVKQVASGSP-WYGSDRVLYLGPLSG 168 AS + V ++ S+S AR T + + K K V S P W+ Sbjct: 10 ASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPG----------A 59 Query: 169 EPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------ 261 + P YL G GDYG+D GL E AKN Sbjct: 60 KSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKST 119 Query: 262 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 399 RE E+IH RWAML LG + E L GV W AG + Sbjct: 120 PFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL--TGV-----TWQDAGKVELVD 172 Query: 400 GGLDYLGNP 426 G YLG P Sbjct: 173 GS-SYLGQP 180 Score = 33.5 bits (75), Expect = 0.21 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 142 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 312 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 42.0 bits (97), Expect = 6e-04 Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 1/43 (2%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPW 126 +SP+FAG+AVK PS+S + G R+TMRK A K S SPW Sbjct: 9 SSPSFAGQAVKLSPSASEISGNGRITMRKAVA--KSAPSSSPW 49
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 40.8 bits (94), Expect = 0.001 Identities = 48/167 (28%), Positives = 60/167 (35%), Gaps = 43/167 (25%) Frame = +1 Query: 55 FGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 234 FG+ + +K+A K V + P + Y G +S P +L G GDYG+D GL Sbjct: 36 FGKKKAAPKKSAKKT--VTTDRPLW------YPGAIS---PDWLDGSLVGDYGFDPFGLG 84 Query: 235 ADPE-----------TFAKN--------------------------------RELEVIHC 285 E AKN RE E+IH Sbjct: 85 KPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHG 144 Query: 286 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 426 RWAML LG + E L GV W AG +G YLG P Sbjct: 145 RWAMLATLGALSVEWL--TGV-----TWQDAGKVELVDGS-SYLGQP 183 Score = 35.4 bits (80), Expect = 0.056 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 142 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 312 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 40.4 bits (93), Expect = 0.002 Identities = 39/128 (30%), Positives = 44/128 (34%), Gaps = 43/128 (33%) Frame = +1 Query: 172 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 261 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 262 -------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 402 RE E+IH RWAMLG LG + E L G+ W AG EG Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL--TGI-----AWQDAGKVELVEG 177 Query: 403 GLDYLGNP 426 YLG P Sbjct: 178 S-SYLGQP 184 Score = 30.8 bits (68), Expect = 1.4 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +1 Query: 142 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 309 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 40.0 bits (92), Expect = 0.002 Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Frame = +1 Query: 1 ASPAFAGKAVKNLPSSS-LFGEARVTMRKTAAKVKQVASGSPW 126 +SP+FAG+AVK PS+S G R+TMRK A K S SPW Sbjct: 9 SSPSFAGQAVKLSPSASENSGNGRITMRKAVA--KSAPSSSPW 49
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 39.7 bits (91), Expect = 0.003 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Frame = +1 Query: 151 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 324 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 325 ELLARN--GVKFGEAVW 369 E ++ + G +G+A + Sbjct: 192 EAVSGDTWGTYWGDATF 208
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 36.2 bits (82), Expect = 0.033 Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 45/108 (41%) Frame = +1 Query: 175 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 261 P +L G PGD G+D GLS E AKN Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118 Query: 262 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 363 RE E+IH RWAML LG + E A GV + EA Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 34.3 bits (77), Expect = 0.13 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = +1 Query: 58 GEARVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 234 G A +R T ++ + S PW+G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 235 ADPETFAKNRELEVIHCR 288 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.7 bits (73), Expect = 0.37 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 64 ARVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R T ++ + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 241 PETFAKNRELEVIHCR 288 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.7 bits (73), Expect = 0.37 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 64 ARVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R T ++ + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGAD 167 Query: 241 PETFAKNRELEVIHCR 288 A R++ H R Sbjct: 168 K---AYRRDIMEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.7 bits (73), Expect = 0.37 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 64 ARVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R T ++ + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 241 PETFAKNRELEVIHCR 288 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 32.7 bits (73), Expect = 0.37 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +1 Query: 64 ARVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R T K+ ++ + PW+G ++ L ++G P + FPG G G+ AD Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.3 bits (72), Expect = 0.48 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 12/114 (10%) Frame = +1 Query: 64 ARVTMRKTAAKVKQ-VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R + ++ V+S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHSCKRIMDMVSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 241 PETFAKNRELEVIH---CRWAMLGALGC---VFP-----ELLARNGVKFGEAVW 369 A R++ H C +A + G V P ++ G++ G+ +W Sbjct: 168 K---AYGRDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.3 bits (72), Expect = 0.48 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 64 ARVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R T ++ + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 241 PETFAKNRELEVIHCR 288 A R++ H R Sbjct: 168 R---AYGRDIVEAHYR 180
>I2C4_HUMAN (Q9HCK5) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) Length = 861 Score = 32.3 bits (72), Expect = 0.48 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 5/121 (4%) Frame = -2 Query: 393 EDLGSSLEPNSLTKLNTVAGKQLGEDTTEC-----AKHSPPTMNHLQLTVLGEGLRVS** 229 EDL S + L K++ AG + C A P HL++T +G L V Sbjct: 456 EDLLKSFT-DQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMTYVGLQLIVVIL 514 Query: 228 PGSVPAIVTRELPGEVARGLARKRTEVEHTVRAVPWAAGGNLLDLCRRLAHGDTCLAKKR 49 PG P + G+ G+A + +V++ V+ P L + +L + L + Sbjct: 515 PGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQ 574 Query: 48 R 46 R Sbjct: 575 R 575
>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 32.0 bits (71), Expect = 0.62 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 67 RVTMRKTAAKV-KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 213 R R AAKV +Q PW+G ++ L G P + G FPG G Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154
>GLN11_ORYSA (P14656) Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2)| (OsGLN1;1) (OsGS1;1) (Glutamate--ammonia ligase GLN1;1) (Glutamine synthetase shoot isozyme) Length = 356 Score = 31.6 bits (70), Expect = 0.81 Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 4/109 (3%) Frame = +1 Query: 79 RKTAAKV---KQVASGSPWYGSDR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 246 R AAK+ +VAS PWYG ++ L P + G FPG G G+ AD Sbjct: 107 RHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKS 166 Query: 247 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 393 + C +A + G + + + G +V AG Q++ Sbjct: 167 FGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQVW 215
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 0.81 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 12/114 (10%) Frame = +1 Query: 64 ARVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R + ++ + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHSCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 241 PETFAKNRELEVIH---CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 369 A R++ H C +A + G V P ++ G++ G+ +W Sbjct: 168 K---AYGRDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>I2C4_MOUSE (Q8CJF8) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) (Piwi/argonaute family protein meIF2C4) Length = 861 Score = 31.6 bits (70), Expect = 0.81 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 5/109 (4%) Frame = -2 Query: 393 EDLGSSLEPNSLTKLNTVAGKQLGEDTTEC-----AKHSPPTMNHLQLTVLGEGLRVS** 229 EDL S + L K++ AG + C A P HL++T +G L V Sbjct: 456 EDLLKSFT-DQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMTYVGLQLIVVIL 514 Query: 228 PGSVPAIVTRELPGEVARGLARKRTEVEHTVRAVPWAAGGNLLDLCRRL 82 PG P + G+ G+A + ++++ V+ P L +LC ++ Sbjct: 515 PGKTPVYAEVKRVGDTLLGMATQCVQIKNVVKTSP----QTLSNLCLKM 559
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 31.2 bits (69), Expect = 1.1 Identities = 24/85 (28%), Positives = 43/85 (50%) Frame = -3 Query: 377 ALNQTASPNLTPLRASSSGKTQPSAPSIAHRQ*ITSSSRFLAKVSGSADNPAVSQP*SPG 198 +L + S +L P +SSSG + S P +Q ++S++ S S+ N + ++ SP Sbjct: 224 SLATSTSTSLAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPN 276 Query: 197 NSPVR*LGGSPESGPR*STRSEPYH 123 N+ R +GG+ S +T + H Sbjct: 277 NNGARSVGGAATSAATGTTAAAGSH 301
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 403 Score = 31.2 bits (69), Expect = 1.1 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 12/114 (10%) Frame = +1 Query: 64 ARVTMRKTAAKV-KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R + K+ +A+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 138 AESNLRHSCQKIMSMIANEYPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGAD 197 Query: 241 PETFAKNRELEVIH---CRWAMLGALGCVFPELLAR--------NGVKFGEAVW 369 A R++ H C +A + G + A+ G++ G+ +W Sbjct: 198 K---AYGRDIVEAHYRACLYAGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLW 248
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 404 PPSLKIWDPALNQTASPNLTPLRASSSGKTQPSAPSIA 291 PP+ P T+SP+ T ++SS+ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 1.4 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 12/114 (10%) Frame = +1 Query: 64 ARVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R ++ + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHICKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 241 PETFAKNRELEVIH---CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 369 A R++ H C +A + G V P ++ G++ G+ +W Sbjct: 168 K---AYGRDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 67 RVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 213 R R AKV ++A PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 404 PPSLKIWDPALNQTASPNLTPLRASSSGKTQPSAPSIA 291 PP+ P T+SP+ T ++SS+ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 424 Score = 30.8 bits (68), Expect = 1.4 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = +1 Query: 91 AKVKQVASGSP---WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 261 AKV QVA G+ W G V G GE G PG YG + SAD T+ KN Sbjct: 103 AKVCQVAQGTGTLLWRG---VSLAGAEFGE------GSLPGTYGSNYIYPSADSATYYKN 153 Query: 262 RELEVIHC--RWAML 300 + + ++ RW L Sbjct: 154 KGMNLVRLPFRWERL 168
>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 30.8 bits (68), Expect = 1.4 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 64 ARVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 240 A +R T ++ + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 109 ADTNLRHTCRRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGAD 168 Query: 241 PETFAKNRELEVIHCR 288 A R++ H R Sbjct: 169 K---AYGRDIVEAHYR 181
>YBK4_YEAST (P38164) WD-repeat protein YBL104C| Length = 1038 Score = 30.4 bits (67), Expect = 1.8 Identities = 16/72 (22%), Positives = 33/72 (45%) Frame = -3 Query: 425 GLPR*SRPPSLKIWDPALNQTASPNLTPLRASSSGKTQPSAPSIAHRQ*ITSSSRFLAKV 246 GL R SL+IWD + + + P+ + + ++ S + + +S++FL ++ Sbjct: 166 GLDRNKHDSSLQIWDMNYHDDSHETINPMFSYCTNESIVSLKFLNDTSVLAASTKFLKEI 225 Query: 245 SGSADNPAVSQP 210 + NP P Sbjct: 226 DVRSPNPIYQHP 237
>RBP2_HUMAN (P49792) Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein| Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270) Length = 3224 Score = 30.4 bits (67), Expect = 1.8 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = -1 Query: 277 SPPAHGSWRRSQGQLITRQCPSHSHQGTPR*GSSGARQKADRGRAHGQSRTMGCRRQPA* 98 S + +RRS + T P S GTP ++ + D G AHG G +P Sbjct: 1118 SQQKNSGFRRSD-DMFTFHGPGKSVFGTPTLETANKNHETDGGSAHGDDDDDGPHFEPVV 1176 Query: 97 PLP 89 PLP Sbjct: 1177 PLP 1179
>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington| disease gene regulatory region-binding protein 1) (HDBP-1) Length = 387 Score = 27.7 bits (60), Expect(2) = 2.0 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 172 PPSYLTGEFPGDYGWDTAGLSADPET 249 P SY + GD+GWD A + P T Sbjct: 145 PGSYSSSSNSGDWGWDLASDQSSPST 170 Score = 21.2 bits (43), Expect(2) = 2.0 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +2 Query: 74 PCARRRQRSSRLPPAAHGTALTVCSTSVRFLASPRA 181 P R +RL ALT STS L +P A Sbjct: 91 PAQRATPGKARLDEVMAAAALTSLSTSPLLLGAPVA 126
>SYC_XYLFT (Q87EL7) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 467 Score = 30.0 bits (66), Expect = 2.4 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = -2 Query: 411 VEAALAEDLGSSLEPNSLTKLNTVAGK---QLGEDTTECAKHSPPTMNHLQLTVLGEGL 244 +EAAL +DL + P +L +L T+A + QL + T A + L+ +LG GL Sbjct: 340 IEAALDDDLNT---PQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGL 395
>SYC_XYLFA (Q9PEN3) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 467 Score = 30.0 bits (66), Expect = 2.4 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = -2 Query: 411 VEAALAEDLGSSLEPNSLTKLNTVAGK---QLGEDTTECAKHSPPTMNHLQLTVLGEGL 244 +EAAL +DL + P +L +L T+A + QL + T A + L+ +LG GL Sbjct: 340 IEAALDDDLNT---PQALAELATLANEARIQLADTTHHAAAEVTAALTRLKAELLGAGL 395
>T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein 2 (Thyroid| hormone receptor-associated protein complex 240 kDa component-like) Length = 2207 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Frame = -3 Query: 404 PPSLKIWDPALNQTASPNLTPLRASSS--GKTQPSAPSIAHRQ*ITSSSRFLAKVSGSAD 231 PP+ ++P + +A+P + ASS G + SAP I TSSS F V G Sbjct: 1556 PPAGSAFNPTSSSSANPTTSSSSASSGPPGSSAASAPGITQMN-TTSSSGFGGGVGG--Q 1612 Query: 230 NPAV---SQP*SPGN 195 NP+ S +PGN Sbjct: 1613 NPSAGGSSTDRTPGN 1627
>RAD52_NEUCR (Q9HGI2) DNA repair and recombination protein mus-11 (RAD52| homolog) Length = 600 Score = 30.0 bits (66), Expect = 2.4 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = -1 Query: 316 HNRVRQA*PTDNESPPAHGSWRRSQGQLITRQCPSHSHQGTPR*GSSGARQKADRGRAHG 137 H ++ P +S P S S G L TRQ P +SHQ T R S +Q+ + Sbjct: 262 HQQLTNLNPQAQQSRPLSRSG--STGSLNTRQQPQNSHQFTARAQSRPPQQQLN----SN 315 Query: 136 QSRTMG 119 QSR MG Sbjct: 316 QSRPMG 321
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 30.0 bits (66), Expect = 2.4 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 14/100 (14%) Frame = -3 Query: 425 GLPR*SRPPSLKIWDPALNQTASPNL-------------TPLRASSSGKTQ-PSAPSIAH 288 G P PP+ K+ +P++ ++A +L TP+ SS +Q S P ++ Sbjct: 311 GNPNAVLPPTAKLTEPSVEKSALGSLCKTVSQIGQAQSTTPVTTPSSRPSQLASPPPASN 370 Query: 287 RQ*ITSSSRFLAKVSGSADNPAVSQP*SPGNSPVR*LGGS 168 I+SSS A S S+ + S S +SP L G+ Sbjct: 371 ASTISSSSSTAASCSASSSSGCSSAASSLNSSPSSRLAGA 410
>GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precursor (EC| 6.3.1.2) (Glutamate--ammonia ligase 1) Length = 399 Score = 29.6 bits (65), Expect = 3.1 Identities = 18/74 (24%), Positives = 30/74 (40%) Frame = +1 Query: 91 AKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 270 A + ++ PW+G ++ L + G P + FP G G+ AD E Sbjct: 156 AAIDLISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEA 215 Query: 271 EVIHCRWAMLGALG 312 V+ C +A + G Sbjct: 216 HVVACLYAGIDFAG 229
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.6 bits (65), Expect = 3.1 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +1 Query: 244 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG-----GL 408 ET +K R+++ I C ++ +L +F E++ NG F + +G + F+ GL Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKEFARRFALTFGL 961 Query: 409 DYL 417 D L Sbjct: 962 DQL 964
>VE2_HPV22 (P50768) Regulatory protein E2| Length = 436 Score = 29.3 bits (64), Expect = 4.0 Identities = 19/65 (29%), Positives = 25/65 (38%) Frame = -1 Query: 319 RHNRVRQA*PTDNESPPAHGSWRRSQGQLITRQCPSHSHQGTPR*GSSGARQKADRGRAH 140 R R RQ PT + +G TR+ S +PR G G R R+ Sbjct: 250 RRERQRQETPTRRRKTRSRSRSTEQRGGRATRRSLSRESAESPRRGGRGGGGPLTRSRSR 309 Query: 139 GQSRT 125 +SRT Sbjct: 310 SRSRT 314
>YMS1_YEAST (Q05050) Hypothetical 93.3 kDa protein in TAP42-CYK2 intergenic| region Length = 843 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/69 (23%), Positives = 36/69 (52%) Frame = +2 Query: 83 RRRQRSSRLPPAAHGTALTVCSTSVRFLASPRATSPGSSLVTMAGTLPGYQLTLRPSPRT 262 +R+ + S A+ ++T+ +TS+ + R+ S S+ ++G + T+ P P+T Sbjct: 145 KRKSKESPGAAASKAYSMTMETTSLSSQTNSRSYSITSASSVLSGASGSFNSTVNPKPKT 204 Query: 263 VSWR*FIVG 289 ++ +VG Sbjct: 205 LNLEKVLVG 213
>EPHA8_MOUSE (O09127) Ephrin type-A receptor 8 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor EEK) (EPH- and ELK-related kinase) Length = 1004 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -1 Query: 262 GSWRRSQGQLITRQCPSHSHQGTPR*GSSGARQKADRGRAHGQSRTMGCRRQPA*PL 92 G ++ + G + +CP HSH TP + R RA + C R P+ P+ Sbjct: 278 GFYKSAPGDQLCARCPPHSHSATP--AAQTCRCDLSYYRAALDPPSAACTRPPSAPV 332
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 4.0 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 244 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 354 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>VIEN_NPVAC (P24647) Immediate-early regulatory protein IE-N| Length = 408 Score = 28.9 bits (63), Expect = 5.3 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = -3 Query: 419 PR*SRPPSLKIWDPALNQTASPNLTPLRASSSGKTQPSAPSIAHRQ 282 P SR L + +N T SP P SSS ++QPS+ S +HR+ Sbjct: 10 PSSSRRHRLSLSRRRINFTTSPEAQP---SSSSRSQPSSSSRSHRR 52
>GLNA_SUIBO (Q8J1R3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 67 RVTMRKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 213 R R KV +A S PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTKKVMDLAKDSVPWFGLEQEYTLFDADGTPFGWPKGGFPGPQG 154
>ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs)| Length = 1669 Score = 28.9 bits (63), Expect = 5.3 Identities = 23/73 (31%), Positives = 29/73 (39%) Frame = -1 Query: 286 DNESPPAHGSWRRSQGQLITRQCPSHSHQGTPR*GSSGARQKADRGRAHGQSRTMGCRRQ 107 DN++P A + Q Q +T Q P HS G P G RGR T G Sbjct: 1458 DNQAPRASSAPPMHQNQFVTVQNPLHSINGIPMGG---------RGRPASVDTTAGSGNV 1508 Query: 106 PA*PLPPSCAW*H 68 A P+ + A H Sbjct: 1509 IAPPISATDALHH 1521
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 28.9 bits (63), Expect = 5.3 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = -3 Query: 377 ALNQTASPNLTP----LRASSSGKTQPSAPSIAHRQ*ITSSSRFLAKVSGSADNPAVSQP 210 A++ T +P +TP + +S PSAP+++ + +S+S + S PAVSQ Sbjct: 399 AMSSTGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSSTSGSVMYPSLPTSLPAVSQ- 457 Query: 209 *SPGNSPVR*LGGSPESGPR 150 G S LG S ES R Sbjct: 458 -GFGQSTTTTLGPSFESNER 476
>YQP4_CAEEL (Q09531) Hypothetical protein F07F6.4 in chromosome III| Length = 529 Score = 28.5 bits (62), Expect = 6.9 Identities = 20/74 (27%), Positives = 35/74 (47%) Frame = -3 Query: 266 SRFLAKVSGSADNPAVSQP*SPGNSPVR*LGGSPESGPR*STRSEPYHGLPEATCLTFAA 87 SR+ A S S+ + A + + G SP+ + + G + S+ Y G PE C T +A Sbjct: 399 SRYTASSSSSSTSRAPTTRLTAGASPISDVDLQKKFGNAKAISSDMYFGTPEMDCETRSA 458 Query: 86 VLRMVTRASPKRDD 45 + + + S +D Sbjct: 459 LTKCEGQTSFGSED 472
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 28.5 bits (62), Expect = 6.9 Identities = 21/49 (42%), Positives = 26/49 (53%) Frame = -3 Query: 206 SPGNSPVR*LGGSPESGPR*STRSEPYHGLPEATCLTFAAVLRMVTRAS 60 SPG P G+P S PR + R+ PY GLP A A R ++RAS Sbjct: 771 SPGPPPPASPPGAPAS-PR-APRTSPYGGLPAAPLAGPALPARRLSRAS 817
>YO25_CAEEL (P34675) Hypothetical protein ZK688.5| Length = 1620 Score = 28.5 bits (62), Expect = 6.9 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 6/78 (7%) Frame = -3 Query: 404 PPSLKIWDPALNQTASPNLTPLRASSSGKTQPSA--PSIAHRQ*I----TSSSRFLAKVS 243 P + + A T +P PL +SS SA P RQ + T+ F +S Sbjct: 908 PNHISLTFTATTHTFAPAGFPLMMASSNVPSTSAGPPGWPIRQVVSPTPTTRGLFEFDLS 967 Query: 242 GSADNPAVSQP*SPGNSP 189 GS+D PA S P P +P Sbjct: 968 GSSDQPARSTPSPPAPTP 985
>PAX9_CHICK (P55166) Paired box protein Pax-9 (Fragment)| Length = 339 Score = 28.5 bits (62), Expect = 6.9 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 5/84 (5%) Frame = +1 Query: 7 PAFAGKAVKNLPSSSLFGEARVTMRKTA----AKVKQVASGSPWYGSDRVLYLGPLSGEP 174 P A AV L SSL EA+ + + SP+ S +V P S P Sbjct: 232 PPAAQHAVNGLEKSSLEQEAKYSQAHNGLPAVGSFVSAPAMSPYATSAQVSPYMPYSAAP 291 Query: 175 PSYLTGEFPGDYGWD-TAGLSADP 243 SY+ G +GW TAG P Sbjct: 292 SSYMAG-----HGWQHTAGTPLSP 310
>RK22_CHLRE (Q84U21) 50S ribosomal protein L22, chloroplast precursor| Length = 175 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +2 Query: 59 ARHVSPCARRRQRSSRLPPAAHGTALTVCSTSVRFLASPRA 181 AR V P R +R+ P A TA VCS + A+P A Sbjct: 16 ARSVQPFRPAAVRPARIAPVARKTATVVCSAATDAPAAPVA 56
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 28.1 bits (61), Expect = 9.0 Identities = 35/94 (37%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Frame = +1 Query: 70 VTMRKTAAKVKQVASGSPWYGSDRVL----YLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 237 V+ KT + K V S S S RV YL L G +G F G WD L+A Sbjct: 28 VSGSKTVSGGKTVGSASA--ESRRVAEVQAYLATLPG--CGVESGPFKGV--WDPLSLAA 81 Query: 238 DPET--FAKNRELEVIHCRWAMLGALGCVFPELL 333 + RE E+ H R AML ALG V E L Sbjct: 82 TATVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115
>CH60_CHRVI (P31293) 60 kDa chaperonin (Protein Cpn60) (groEL protein)| Length = 546 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -2 Query: 399 LAEDLGSSLEPNSLTKLNTVAGKQLGEDTT 310 ++E++G SLE +LT L T Q+G+D T Sbjct: 301 ISEEVGLSLEKATLTDLGTAKRVQVGKDET 330
>PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 766 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -2 Query: 126 PWAAGGNLLDLCRRLAHGDTCLAKKRR*WQVLH 28 P A GG L LC+ LA D + ++RR +V+H Sbjct: 96 PNALGGGLERLCQMLAEPDLGIERQRREREVIH 128
>SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)| Length = 705 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 8/38 (21%) Frame = +2 Query: 110 PPAAH--------GTALTVCSTSVRFLASPRATSPGSS 199 PP AH GTA S+ V ASP A SPGSS Sbjct: 34 PPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSS 71
>GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 358 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = +1 Query: 79 RKTAAKVKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 213 R AK+ + PW+G ++ L L G P + G FPG G Sbjct: 113 RHECAKIMEAHKDQKPWFGLEQEYTLFDLYGNPYGWPKGGFPGPQG 158
>TUS1_YEAST (Q06412) Rho1 guanine nucleotide exchange factor TUS1 (TOR unique| function suppressor protein 1) Length = 1307 Score = 28.1 bits (61), Expect = 9.0 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 7/136 (5%) Frame = -3 Query: 404 PPSLKIWDPALNQTASPNLTPLRASSSGKTQPSAPSIA-------HRQ*ITSSSRFLAKV 246 PP ++ + SP ++P +S S + P+ S H + I++ SR L Sbjct: 107 PPPPLLYSTESIRIDSPMVSP--SSQSRERSPNKLSFIGNSEERHHMEYISNHSRILKSP 164 Query: 245 SGSADNPAVSQP*SPGNSPVR*LGGSPESGPR*STRSEPYHGLPEATCLTFAAVLRMVTR 66 + +P + P SP +S + S ES R R + +P T L Sbjct: 165 FANGFSP--NSPKSPRDSSKQQAHFSDESDLRCHEREKALPPIPFTTTLLL--------- 213 Query: 65 ASPKRDDDGKFFTALP 18 SP D+D +FFT P Sbjct: 214 -SPFDDEDSEFFTKPP 228 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.137 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,230,207 Number of Sequences: 219361 Number of extensions: 1615358 Number of successful extensions: 5444 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 5138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5384 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
