ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet32d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
2dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
3dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
4dbj|AK062667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
5dbj|AK062493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
6ref|XM_475853.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
7gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
8gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
9gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
11dbj|AK062463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
12ref|NM_197249.1| Oryza sativa (japonica cultivar-group) putative... 54 4e-04
13gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
15dbj|AK063196.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
17emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 44 0.39
18gb|AC016683.7| Homo sapiens BAC clone RP11-65I12 from 2, complet... 44 0.39
19dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.39
20gb|U88090.1|HVU88090 Hordeum vulgare nonspecific lipid transfer ... 44 0.39
21gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.5
22gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.5
23gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, comp... 42 1.5
24gb|AC162905.4| Mus musculus BAC clone RP24-281B12 from chromosom... 42 1.5
25gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.5
26gb|AE004731.1| Pseudomonas aeruginosa PAO1, section 292 of 529 o... 42 1.5
27gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.5
28emb|AL672219.7| Mouse DNA sequence from clone RP23-456B9 on chro... 42 1.5
29gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.1
30gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 6.1
31gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete... 40 6.1
32gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.1
33gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.1
34gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.1
35emb|AL391500.13| Human DNA sequence from clone RP11-707M13 on ch... 40 6.1
36emb|AL356272.14| Human DNA sequence from clone RP1-61P15 on chro... 40 6.1
37emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.1
38gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.1
39gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.1
40gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.1
41gb|AC008135.12|AC008135 Drosophila melanogaster, chromosome 3R, ... 40 6.1
42ref|XM_316830.2| Anopheles gambiae str. PEST ENSANGP00000010214 ... 40 6.1
43ref|NM_211717.1| Eremothecium gossypii AGL011Cp (AGL011C), mRNA 40 6.1
44gb|AY105127.1| Zea mays PCO127262 mRNA sequence 40 6.1
45gb|AE003761.2| Drosophila melanogaster chromosome 3R, section 99... 40 6.1
46gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.1

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 121/147 (82%)
 Strand = Plus / Plus

                                                                            
Query: 188      ccgtgcgtgggcgccatcatgctgggcggggcggtgactccagggtgctgcgcccggctg 247
                |||||| || |||| ||||||||||||| ||||  | | || || |||||||  | ||||
Sbjct: 29292132 ccgtgcatgagcgcgatcatgctgggcgcggcgccgtcgcccggctgctgcgtgcagctg 29292191

                                                                            
Query: 248      cgcgcccagcgggcgtgcctgtgccagtacgcgcgcgacccggcgtaccgcggctacgtc 307
                || || |||| | ||||||||||||||||||||||||||||  | |||||| ||||||||
Sbjct: 29292192 cgggcgcagcagccgtgcctgtgccagtacgcgcgcgacccatcctaccgcagctacgtc 29292251

                                           
Query: 308      aacagccccagggcgcagagcgtcgtc 334
                |  |||||||| |||||| ||| ||||
Sbjct: 29292252 acgagccccagcgcgcagcgcgccgtc 29292278



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>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0621D05
          Length = 180250

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 121/147 (82%)
 Strand = Plus / Plus

                                                                        
Query: 188  ccgtgcgtgggcgccatcatgctgggcggggcggtgactccagggtgctgcgcccggctg 247
            |||||| || |||| ||||||||||||| ||||  | | || || |||||||  | ||||
Sbjct: 3013 ccgtgcatgagcgcgatcatgctgggcgcggcgccgtcgcccggctgctgcgtgcagctg 3072

                                                                        
Query: 248  cgcgcccagcgggcgtgcctgtgccagtacgcgcgcgacccggcgtaccgcggctacgtc 307
            || || |||| | ||||||||||||||||||||||||||||  | |||||| ||||||||
Sbjct: 3073 cgggcgcagcagccgtgcctgtgccagtacgcgcgcgacccatcctaccgcagctacgtc 3132

                                       
Query: 308  aacagccccagggcgcagagcgtcgtc 334
            |  |||||||| |||||| ||| ||||
Sbjct: 3133 acgagccccagcgcgcagcgcgccgtc 3159



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>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0018H04
          Length = 142053

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 121/147 (82%)
 Strand = Plus / Plus

                                                                         
Query: 188   ccgtgcgtgggcgccatcatgctgggcggggcggtgactccagggtgctgcgcccggctg 247
             |||||| || |||| ||||||||||||| ||||  | | || || |||||||  | ||||
Sbjct: 54930 ccgtgcatgagcgcgatcatgctgggcgcggcgccgtcgcccggctgctgcgtgcagctg 54989

                                                                         
Query: 248   cgcgcccagcgggcgtgcctgtgccagtacgcgcgcgacccggcgtaccgcggctacgtc 307
             || || |||| | ||||||||||||||||||||||||||||  | |||||| ||||||||
Sbjct: 54990 cgggcgcagcagccgtgcctgtgccagtacgcgcgcgacccatcctaccgcagctacgtc 55049

                                        
Query: 308   aacagccccagggcgcagagcgtcgtc 334
             |  |||||||| |||||| ||| ||||
Sbjct: 55050 acgagccccagcgcgcagcgcgccgtc 55076



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>dbj|AK062667.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-F12, full
           insert sequence
          Length = 626

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 121/147 (82%)
 Strand = Plus / Plus

                                                                       
Query: 188 ccgtgcgtgggcgccatcatgctgggcggggcggtgactccagggtgctgcgcccggctg 247
           |||||| || |||| ||||||||||||| ||||  | | || || |||||||  | ||||
Sbjct: 210 ccgtgcatgagcgcgatcatgctgggcgcggcgccgtcgcccggctgctgcgtgcagctg 269

                                                                       
Query: 248 cgcgcccagcgggcgtgcctgtgccagtacgcgcgcgacccggcgtaccgcggctacgtc 307
           || || |||| | ||||||||||||||||||||||||||||  | |||||| ||||||||
Sbjct: 270 cgggcgcagcagccgtgcctgtgccagtacgcgcgcgacccatcctaccgcagctacgtc 329

                                      
Query: 308 aacagccccagggcgcagagcgtcgtc 334
           |  |||||||| |||||| ||| ||||
Sbjct: 330 acgagccccagcgcgcagcgcgccgtc 356



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>dbj|AK062493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-H09, full
           insert sequence
          Length = 437

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 266 ctgtgccagtacgcgcgcgacccggcgtaccgcggctacgtcaacagccccagggcgcag 325
           |||||||||||||||||||||||  | |||||| |||||||||  |||||||| ||||||
Sbjct: 156 ctgtgccagtacgcgcgcgacccatcctaccgcagctacgtcacgagccccagcgcgcag 215

                    
Query: 326 agcgtcgtc 334
            ||| ||||
Sbjct: 216 cgcgccgtc 224



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>ref|XM_475853.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 285

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 261 cgtgcctgtgccagtacgcgcgcgaccc 288
           ||||||||||||||||||||||||||||
Sbjct: 179 cgtgcctgtgccagtacgcgcgcgaccc 206



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>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
             complete sequence
          Length = 177861

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 261   cgtgcctgtgccagtacgcgcgcgaccc 288
             ||||||||||||||||||||||||||||
Sbjct: 42065 cgtgcctgtgccagtacgcgcgcgaccc 42092



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>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
              complete sequence
          Length = 141715

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                          
Query: 261    cgtgcctgtgccagtacgcgcgcgaccc 288
              ||||||||||||||||||||||||||||
Sbjct: 117250 cgtgcctgtgccagtacgcgcgcgaccc 117277



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>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
              complete sequence
          Length = 166218

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                          
Query: 261    cgtgcctgtgccagtacgcgcgcgaccc 288
              ||||||||||||||||||||||||||||
Sbjct: 141753 cgtgcctgtgccagtacgcgcgcgaccc 141780



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                            
Query: 261      cgtgcctgtgccagtacgcgcgcgaccc 288
                ||||||||||||||||||||||||||||
Sbjct: 27110669 cgtgcctgtgccagtacgcgcgcgaccc 27110696



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>dbj|AK062463.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-D11, full
           insert sequence
          Length = 625

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 261 cgtgcctgtgccagtacgcgcgcgaccc 288
           ||||||||||||||||||||||||||||
Sbjct: 277 cgtgcctgtgccagtacgcgcgcgaccc 304



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>ref|NM_197249.1| Oryza sativa (japonica cultivar-group) putative lipid transfer
           protein (OSJNBa0062C05.23), mRNA
          Length = 276

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 245 ctgcgcgcccagcgggcgtgcctgtgccagtacgcgcgcgacccggcgtac 295
           |||||||| ||| ||| |||| | ||||||||||||||| |||||||||||
Sbjct: 154 ctgcgcgcgcagagggggtgcttctgccagtacgcgcgcaacccggcgtac 204



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>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05
              map S21174S, complete sequence
          Length = 178867

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 245    ctgcgcgcccagcgggcgtgcctgtgccagtacgcgcgcgacccggcgtac 295
              |||||||| ||| ||| |||| | ||||||||||||||| |||||||||||
Sbjct: 114018 ctgcgcgcgcagagggggtgcttctgccagtacgcgcgcaacccggcgtac 113968



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 245      ctgcgcgcccagcgggcgtgcctgtgccagtacgcgcgcgacccggcgtac 295
                |||||||| ||| ||| |||| | ||||||||||||||| |||||||||||
Sbjct: 18816282 ctgcgcgcgcagagggggtgcttctgccagtacgcgcgcaacccggcgtac 18816232



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>dbj|AK063196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-C03, full
           insert sequence
          Length = 503

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 245 ctgcgcgcccagcgggcgtgcctgtgccagtacgcgcgcgacccggcgtac 295
           |||||||| ||| ||| |||| | ||||||||||||||| |||||||||||
Sbjct: 236 ctgcgcgcgcagagggggtgcttctgccagtacgcgcgcaacccggcgtac 286



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 245      ctgcgcgcccagcgggcgtgcctgtgccagtacgcgcgcgacccggcgtac 295
                |||||||| ||| ||| |||| | ||||||||||||||| |||||||||||
Sbjct: 18827536 ctgcgcgcgcagagggggtgcttctgccagtacgcgcgcaacccggcgtac 18827486



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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 109     cgtgctgctgctcgtcctgtgcggcctgct 138
               ||||||||||||||| ||||||||| ||||
Sbjct: 4415030 cgtgctgctgctcgtactgtgcggcatgct 4415001



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>gb|AC016683.7| Homo sapiens BAC clone RP11-65I12 from 2, complete sequence
          Length = 179937

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 30    ggtctctgctccagcatttcaa 51
             ||||||||||||||||||||||
Sbjct: 71239 ggtctctgctccagcatttcaa 71260



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 51      atcgccaacaccggcaaggaaa 72
               ||||||||||||||||||||||
Sbjct: 2598730 atcgccaacaccggcaaggaaa 2598751



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>gb|U88090.1|HVU88090 Hordeum vulgare nonspecific lipid transfer protein (ltp-BR1) mRNA,
           complete cds
          Length = 681

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 267 tgtgccagtacgcgcgcgaccc 288
           ||||||||||||||||||||||
Sbjct: 259 tgtgccagtacgcgcgcgaccc 280



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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 98      gccgcggcctgcgtgctgctgctcg 122
               ||||||||||||| |||||||||||
Sbjct: 1740251 gccgcggcctgcgcgctgctgctcg 1740275



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 328     cgtcgtcgccgcgtgcggcct 348
               |||||||||||||||||||||
Sbjct: 2381404 cgtcgtcgccgcgtgcggcct 2381424



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>gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, complete sequence
          Length = 274853

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 210    tgggcggggcggtgactccagggtg 234
              |||||||||||||| ||||||||||
Sbjct: 211531 tgggcggggcggtggctccagggtg 211507



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>gb|AC162905.4| Mus musculus BAC clone RP24-281B12 from chromosome 9, complete sequence
          Length = 205771

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 210    tgggcggggcggtgactccagggtg 234
              |||||||||||||| ||||||||||
Sbjct: 168449 tgggcggggcggtggctccagggtg 168425



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 106     ctgcgtgctgctgctcgtcct 126
               |||||||||||||||||||||
Sbjct: 3178590 ctgcgtgctgctgctcgtcct 3178610



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>gb|AE004731.1| Pseudomonas aeruginosa PAO1, section 292 of 529 of the complete genome
          Length = 18765

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   ctcgtcctgtgcggcctgctc 139
             |||||||||||||||||||||
Sbjct: 15617 ctcgtcctgtgcggcctgctc 15637



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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 195     tgggcgccatcatgctgggcg 215
               |||||||||||||||||||||
Sbjct: 5596725 tgggcgccatcatgctgggcg 5596745



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>emb|AL672219.7| Mouse DNA sequence from clone RP23-456B9 on chromosome 9, complete
              sequence
          Length = 206125

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 210    tgggcggggcggtgactccagggtg 234
              |||||||||||||| ||||||||||
Sbjct: 100020 tgggcggggcggtggctccagggtg 100044



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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    cggctgcgcgcccagcgggc 261
              ||||||||||||||||||||
Sbjct: 664855 cggctgcgcgcccagcgggc 664874



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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tgctccagcatttcaatcgc 55
              ||||||||||||||||||||
Sbjct: 688394 tgctccagcatttcaatcgc 688375



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>gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete sequence
          Length = 177084

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    caccatgggcaacaacaagg 98
             ||||||||||||||||||||
Sbjct: 94886 caccatgggcaacaacaagg 94905



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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 238   cgcccggctgcgcgcccagcgggcgtgc 265
             |||||||||||||||| |||| ||||||
Sbjct: 44363 cgcccggctgcgcgccgagcgcgcgtgc 44390



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 52      tcgccaacaccggcaaggaa 71
               ||||||||||||||||||||
Sbjct: 3400987 tcgccaacaccggcaaggaa 3401006



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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    gcggcctgcgtgctgctgct 120
              ||||||||||||||||||||
Sbjct: 258626 gcggcctgcgtgctgctgct 258645



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>emb|AL391500.13| Human DNA sequence from clone RP11-707M13 on chromosome 6 Contains a
             novel pseudogene and an ADH5 (alcohol dehydrogenase 5
             (class III) chi polypeptide) pseudogene, complete sequence
          Length = 171220

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    aaggaaagcaagtcaccatg 85
             ||||||||||||||||||||
Sbjct: 66245 aaggaaagcaagtcaccatg 66226



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>emb|AL356272.14| Human DNA sequence from clone RP1-61P15 on chromosome 1 Contains a
             eukaryotic translation elongation factor 1 alpha 1
             (EEF1A1) pseudogene, and a novel gene, complete sequence
          Length = 93179

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    caccatgggcaacaacaagg 98
             ||||||||||||||||||||
Sbjct: 88031 caccatgggcaacaacaagg 88012



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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 238     cgcccggctgcgcgcccagcgggcgtgc 265
               |||||||||||||||| |||| ||||||
Sbjct: 1403750 cgcccggctgcgcgccgagcgcgcgtgc 1403777



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 88     caacaacaaggccgcggcctgcgt 111
              |||| |||||||||||||||||||
Sbjct: 876806 caacgacaaggccgcggcctgcgt 876783



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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    cgtgctgctgctcgtcctgt 128
              ||||||||||||||||||||
Sbjct: 701864 cgtgctgctgctcgtcctgt 701845



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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 238     cgcccggctgcgcgcccagcgggcgtgc 265
               |||||||||||||||| |||| ||||||
Sbjct: 1230115 cgcccggctgcgcgccgagcgcgcgtgc 1230088



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>gb|AC008135.12|AC008135 Drosophila melanogaster, chromosome 3R, region 98A-98A, BAC clone
              BACR27H07, complete sequence
          Length = 168306

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     caccatgggcaacaacaagg 98
              ||||||||||||||||||||
Sbjct: 126693 caccatgggcaacaacaagg 126712



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>ref|XM_316830.2| Anopheles gambiae str. PEST ENSANGP00000010214
           (ENSANGG00000007725), partial mRNA
          Length = 1548

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 gctgctgctcgtcctgtgcg 131
           ||||||||||||||||||||
Sbjct: 675 gctgctgctcgtcctgtgcg 694



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>ref|NM_211717.1| Eremothecium gossypii AGL011Cp (AGL011C), mRNA
          Length = 954

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 cgtgctgctgctcgtcctgt 128
           ||||||||||||||||||||
Sbjct: 423 cgtgctgctgctcgtcctgt 442



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>gb|AY105127.1| Zea mays PCO127262 mRNA sequence
          Length = 620

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 261 cgtgcctgtgccagtacgcgcgcgaccc 288
           |||||||||||  |||||||||||||||
Sbjct: 240 cgtgcctgtgcacgtacgcgcgcgaccc 267



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>gb|AE003761.2| Drosophila melanogaster chromosome 3R, section 99 of 118 of the
            complete sequence
          Length = 224910

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   caccatgggcaacaacaagg 98
            ||||||||||||||||||||
Sbjct: 5409 caccatgggcaacaacaagg 5428



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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 320     gcgcagagcgtcgtcgccgcgtgc 343
               |||||| |||||||||||||||||
Sbjct: 2142501 gcgcagggcgtcgtcgccgcgtgc 2142478


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,800,274
Number of Sequences: 3902068
Number of extensions: 2800274
Number of successful extensions: 46055
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44780
Number of HSP's gapped (non-prelim): 1271
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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