ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet32d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor 33 0.31
2STAT1_PIG (Q764M5) Signal transducer and activator of transcript... 32 1.2
3STAT1_HUMAN (P42224) Signal transducer and activator of transcri... 32 1.2
4AB19A_PRUPE (Q9ZRA4) Auxin-binding protein ABP19a precursor 31 2.0
5APAH_VIBCH (Q9KUS4) Bis(5'-nucleosyl)-tetraphosphatase, symmetri... 30 4.5
6AB19B_PRUPE (O04012) Auxin-binding protein ABP19b precursor 30 4.5
7HPCG_ECOLI (P42270) 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (... 29 5.9
8HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock prote... 29 5.9
9HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor) 29 5.9

>ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor|
          Length = 214

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 392 LLPVLISFLVLPFSAMALTQDFCVADLSCSD 484
           + P+L +F +L  S+ A  QDFCVADL+  +
Sbjct: 7   IFPILFTFFLLLSSSNAAVQDFCVADLAAPE 37



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>STAT1_PIG (Q764M5) Signal transducer and activator of transcription 1|
          Length = 757

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = -3

Query: 334 LPGPVGQGYILVEYISVARVRPRTSKGITDLLLPQT 227
           L GP G GYI  E ISV+ V P   +  TD LLP +
Sbjct: 693 LDGPKGTGYIKTELISVSEVHPSRLQ-TTDNLLPMS 727



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>STAT1_HUMAN (P42224) Signal transducer and activator of transcription|
           1-alpha/beta (Transcription factor ISGF-3 components
           p91/p84)
          Length = 750

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = -3

Query: 334 LPGPVGQGYILVEYISVARVRPRTSKGITDLLLPQT 227
           L GP G GYI  E ISV+ V P   +  TD LLP +
Sbjct: 693 LDGPKGTGYIKTELISVSEVHPSRLQ-TTDNLLPMS 727



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>AB19A_PRUPE (Q9ZRA4) Auxin-binding protein ABP19a precursor|
          Length = 209

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 392 LLPVLISFLVLPFSAMALTQDFCVADLSCSD 484
           + P+  +F +L  S+ A  QDFCVAD    D
Sbjct: 2   IFPIFFTFFLLLSSSHASVQDFCVADYKAPD 32



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>APAH_VIBCH (Q9KUS4) Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC|
           3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A
           hydrolase) (Diadenosine 5',5'''-P1,P4-tetraphosphate
           pyrophosphohydrolase)
          Length = 269

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 19/61 (31%), Positives = 27/61 (44%)
 Frame = +1

Query: 304 VYSLGRQARVILGNYTRSISAVASHGQRNVXXXXXXXXXXXXXXXGPDPGLLRRRPVLQR 483
           VY LG  ARV+LGN+   + +VA  G  +                 P    LR++P+L  
Sbjct: 52  VYQLGDAARVVLGNHDLHLLSVAL-GHHSAKRRDQTQAVLDAPDAAPLLDWLRQQPLLAE 110

Query: 484 H 486
           H
Sbjct: 111 H 111



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>AB19B_PRUPE (O04012) Auxin-binding protein ABP19b precursor|
          Length = 209

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 392 LLPVLISFLVLPFSAMALTQDFCVADLSCSD 484
           + P+  +F +L  ++ A  QDFCVAD    D
Sbjct: 2   IFPIFFTFFLLLSTSHASVQDFCVADYKAPD 32



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>HPCG_ECOLI (P42270) 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)|
           (OHED hydratase)
          Length = 264

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 486 VSLQDRSATQKSWVRAMAEKGRTRKEMRTGSNIALAMACYCADASSIISQ-DYPGL 322
           ++++D  A Q+ WVR    +GRT K  + G      +      ASS IS+ DY  L
Sbjct: 34  ITIEDAYAVQREWVRLKIAEGRTLKGHKIG------LTSKAMQASSQISEPDYGAL 83



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>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)|
          Length = 886

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = -1

Query: 474 DRSATQKSWVRAMAEKGRTRKEMRTGSN-IALAMACYCAD---ASSIISQDYPGLSAKAI 307
           D  + Q++W+R MAE  +T+K M   +  I++ + C   D   +  I   D+  L+A+ +
Sbjct: 255 DVKSNQRAWLRLMAECDKTKKLMSANATVISMNIECIMNDRDVSGKISRADFEALAAELL 314



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>HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor)|
          Length = 889

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = -1

Query: 474 DRSATQKSWVRAMAEKGRTRKEMRTGSN-IALAMACYCAD---ASSIISQDYPGLSAKAI 307
           D  + Q++W+R MAE  +T+K M   +  I++ + C   D   +  I   D+  L+A+ +
Sbjct: 255 DVKSNQRAWLRLMAECDKTKKLMSANATLISMNIECIMNDRDVSGKISRADFEALAAELL 314


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,428,345
Number of Sequences: 219361
Number of extensions: 1176641
Number of successful extensions: 2450
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2450
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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