| Clone Name | baet32c05 |
|---|---|
| Clone Library Name | barley_pub |
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 78.2 bits (191), Expect = 9e-15 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Frame = +3 Query: 228 VPCYFVFGDSLVDNGNNNDIASLARANYPPYGIDFP-GGATGRFSNGLTTVDAISRLLGF 404 +P F FGDS+ D GNNN++ + + NY PYG+DFP G ATGRFSNG D IS+ LG Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182 Query: 405 DDYIPAY 425 + +PAY Sbjct: 183 KEIVPAY 189
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 71.2 bits (173), Expect = 1e-12 Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Frame = +3 Query: 228 VPCYFVFGDSLVDNGNNNDIASLARANYPPYGIDFP-GGATGRFSNGLTTVDAISRLLGF 404 +P F FGDS+ D GNNN++ + ++NY PYG+DF ATGRFSNG+ D +++ +G Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261 Query: 405 DDYIPAY 425 + +PAY Sbjct: 262 KEIVPAY 268
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 38.1 bits (87), Expect = 0.011 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = +3 Query: 231 PCYFVFGDSLVDNGNNNDIASLARANYPPYGIDFPGGATGRFSNGLTTVDAISRLLGFDD 410 P F FGDS D G + A+ +A PP+G F G GR+ +G +D I+ LG Sbjct: 29 PAIFNFGDSNSDTGGLS--AAFGQAG-PPHGSSFFGSPAGRYCDGRLVIDFIAESLGL-P 84 Query: 411 YIPAY 425 Y+ A+ Sbjct: 85 YLSAF 89
>SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1) (Fragment)| Length = 18 Score = 37.7 bits (86), Expect = 0.014 Identities = 15/18 (83%), Positives = 16/18 (88%) Frame = +3 Query: 219 DPQVPCYFVFGDSLVDNG 272 DPQVP YF+FGDSL DNG Sbjct: 1 DPQVPXYFIFGDSLYDNG 18
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 35.8 bits (81), Expect = 0.053 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = +3 Query: 231 PCYFVFGDSLVDNGNNNDIASLARANYP---PYGIDFPGGATGRFSNGLTTVDAIS 389 P F FGDS N+D A A YP PYG F +TGR+S+G +D I+ Sbjct: 33 PAIFNFGDS------NSDTGGKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIA 82
>SYT_STRP6 (Q5XDC4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = +3 Query: 324 IDFPGGATGRFSNGLTTVDAISRLLGFDDYIPAYAGANNDQLL 452 I FP GA F +G+TT D I+ L A AG NDQL+ Sbjct: 4 ITFPDGAVREFESGVTTFD-IAESLSKSLAKKALAGKFNDQLI 45
>MUTS_WOLPM (P61673) DNA mismatch repair protein mutS| Length = 849 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/48 (33%), Positives = 30/48 (62%) Frame = +3 Query: 243 VFGDSLVDNGNNNDIASLARANYPPYGIDFPGGATGRFSNGLTTVDAI 386 + DSL+++ +NN +AS+ N Y I + +TG+F + LT++ A+ Sbjct: 140 IIEDSLLEDKSNNYLASIVEQN-DEYAISWLELSTGKFFHTLTSLKAL 186
>SYT_STRP8 (Q8P234) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 29.3 bits (64), Expect = 4.9 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +3 Query: 324 IDFPGGATGRFSNGLTTVDAISRLLGFDDYIPAYAGANNDQLL 452 I FP GA F +G+TT D I+ + A AG NDQL+ Sbjct: 4 ITFPDGAVREFESGVTTFD-IAESISKSLAKKALAGKFNDQLI 45
>SYT_STRP3 (Q8K8C0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 29.3 bits (64), Expect = 4.9 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +3 Query: 324 IDFPGGATGRFSNGLTTVDAISRLLGFDDYIPAYAGANNDQLL 452 I FP GA F +G+TT D I+ + A AG NDQL+ Sbjct: 4 ITFPDGAVREFESGVTTFD-IAESISKSLAKKALAGKFNDQLI 45
>SYT_STRP1 (Q9A115) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 29.3 bits (64), Expect = 4.9 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +3 Query: 324 IDFPGGATGRFSNGLTTVDAISRLLGFDDYIPAYAGANNDQLL 452 I FP GA F +G+TT D I+ + A AG NDQL+ Sbjct: 4 ITFPDGAVREFESGVTTFD-IAESISKSLAKKALAGKFNDQLI 45
>KPRS_CLOTE (Q899I8) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 320 Score = 28.5 bits (62), Expect = 8.4 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = +3 Query: 270 GNNNDIASLARANYPPYGIDFPGGATGRFSNGLTTVDAISRLLGFDDYIPAYAGAN-NDQ 446 GN+ND LA+ G+ GRFS+G TV+ + G D +I A ND Sbjct: 15 GNSND--KLAKDIADIVGVPLGSAEVGRFSDGEITVNINETVRGIDAFIIQSTSAPVNDN 72 Query: 447 LL 452 L+ Sbjct: 73 LM 74 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.129 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,050,839 Number of Sequences: 219361 Number of extensions: 820476 Number of successful extensions: 3190 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2994 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3185 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)