ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet32c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191210.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1092 Score = 299 bits (151), Expect = 4e-78 Identities = 202/219 (92%) Strand = Plus / Plus Query: 209 cgcgcgcgccgatccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaa 268 |||| ||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 63 cgcgggcgccgagccgcaggtgccgtgctacttcgtgttcggggactcgctcgtggacaa 122 Query: 269 tgggaacaacaacgacatcgcgtcgctggcgcgggccaactacccgccctacggcatcga 328 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 123 cgggaacaacaacaacatcgcgtcgatggcgcgggccaactacccgccctacggcgtcga 182 Query: 329 cttccccggcggagccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatctc 388 |||||||||||| || ||||| || |||||||||||||||||||| | ||| |||||||| Sbjct: 183 cttccccggcggcgcgaccggccggttcagcaacggcctcaccacggccgatgccatctc 242 Query: 389 tcggcttctgggcttcgacgactacatcccagcgtacgc 427 |||||||||||||||||||||||||||||| ||||||| Sbjct: 243 tcggcttctgggcttcgacgactacatccccccgtacgc 281
>emb|AJ234640.1|HVU234640 Hordeum vulgare genomic DNA fragment; clone MWG0904.rev Length = 416 Score = 295 bits (149), Expect = 6e-77 Identities = 149/149 (100%) Strand = Plus / Plus Query: 3 ggtcgatcacgcatttcctccgtccacccacctacctacccagctcgtccgccggctggc 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 ggtcgatcacgcatttcctccgtccacccacctacctacccagctcgtccgccggctggc 188 Query: 63 cacgaaccttccaacttccaagtcaagcagctagctactactagctagctaagaagcgcg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 cacgaaccttccaacttccaagtcaagcagctagctactactagctagctaagaagcgcg 248 Query: 123 gcggcgagagaaatggagcgtgtctcgcc 151 ||||||||||||||||||||||||||||| Sbjct: 249 gcggcgagagaaatggagcgtgtctcgcc 277 Score = 174 bits (88), Expect = 2e-40 Identities = 99/102 (97%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 190 ccgccgcgaccgggcggagcgcgcgcgccgatccgcaggtgccgtgctacttcgtgttcg 249 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 316 ccgccgcgaccgggcggagcdcgcgcgccgatccgcag-tgccgtgctacttcgtgttcg 374 Query: 250 gagactcgctggtggacaatgggaacaacaacgacatcgcgt 291 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 375 gggactcgctggtggacaatgggaacaacaacgacatcgcgt 416
>ref|XM_475723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 242 bits (122), Expect = 8e-61 Identities = 181/200 (90%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 82 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 141 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgg- 340 || |||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 142 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 201 Query: 341 --agccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatctctcggcttctg 398 |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 202 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatctctaagcttctg 261 Query: 399 ggcttcgacgactacatccc 418 || ||||| |||| |||||| Sbjct: 262 gggttcgaggacttcatccc 281
>dbj|AK061147.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D08, full insert sequence Length = 1315 Score = 242 bits (122), Expect = 8e-61 Identities = 181/200 (90%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 146 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 205 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgg- 340 || |||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 206 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 265 Query: 341 --agccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatctctcggcttctg 398 |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 266 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatctctaagcttctg 325 Query: 399 ggcttcgacgactacatccc 418 || ||||| |||| |||||| Sbjct: 326 gggttcgaggacttcatccc 345
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 236 bits (119), Expect = 5e-59 Identities = 164/179 (91%) Strand = Plus / Plus Query: 209 cgcgcgcgccgatccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaa 268 |||| ||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 31324852 cgcgggcgccgagccgcaggtgccgtgctacttcgtgttcggggactcgctcgtggacaa 31324911 Query: 269 tgggaacaacaacgacatcgcgtcgctggcgcgggccaactacccgccctacggcatcga 328 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 31324912 cgggaacaacaacaacatcgcgtcgatggcgcgggccaactacccgccctacggcgtcga 31324971 Query: 329 cttccccggcggagccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatct 387 |||||||||||| || ||||| || |||||||||||||||||||| | ||| ||||||| Sbjct: 31324972 cttccccggcggcgcgaccggccggttcagcaacggcctcaccacggccgatgccatct 31325030 Score = 168 bits (85), Expect = 1e-38 Identities = 145/165 (87%) Strand = Plus / Plus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||| | ||||| |||||||| || ||||| || ||||||||| Sbjct: 30355295 ccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaacaacaac 30355354 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgga 341 |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 30355355 tacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 30355414 Query: 342 gccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatc 386 | |||| || |||| ||||||||||||||||||||||| |||| Sbjct: 30355415 ccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatc 30355459 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 388 ctcggcttctgggcttcgacgactacatcccagcgtacgc 427 ||||||||||||||||||||||||||||||| ||||||| Sbjct: 31325130 ctcggcttctgggcttcgacgactacatccccccgtacgc 31325169
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 236 bits (119), Expect = 5e-59 Identities = 164/179 (91%) Strand = Plus / Plus Query: 209 cgcgcgcgccgatccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaa 268 |||| ||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 79135 cgcgggcgccgagccgcaggtgccgtgctacttcgtgttcggggactcgctcgtggacaa 79194 Query: 269 tgggaacaacaacgacatcgcgtcgctggcgcgggccaactacccgccctacggcatcga 328 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 79195 cgggaacaacaacaacatcgcgtcgatggcgcgggccaactacccgccctacggcgtcga 79254 Query: 329 cttccccggcggagccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatct 387 |||||||||||| || ||||| || |||||||||||||||||||| | ||| ||||||| Sbjct: 79255 cttccccggcggcgcgaccggccggttcagcaacggcctcaccacggccgatgccatct 79313 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 388 ctcggcttctgggcttcgacgactacatcccagcgtacgc 427 ||||||||||||||||||||||||||||||| ||||||| Sbjct: 79413 ctcggcttctgggcttcgacgactacatccccccgtacgc 79452
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 220 bits (111), Expect = 3e-54 Identities = 155/169 (91%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 1004 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 945 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgg- 340 || |||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 944 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 885 Query: 341 --agccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatct 387 |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 884 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatct 836
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 220 bits (111), Expect = 3e-54 Identities = 155/169 (91%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 124956 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 124897 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgg- 340 || |||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 124896 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 124837 Query: 341 --agccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatct 387 |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 124836 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatct 124788
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 220 bits (111), Expect = 3e-54 Identities = 155/169 (91%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 25484595 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 25484536 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgg- 340 || |||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 25484535 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 25484476 Query: 341 --agccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatct 387 |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 25484475 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatct 25484427 Score = 99.6 bits (50), Expect = 8e-18 Identities = 107/126 (84%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||| ||| |||||| ||||||||||||||||| |||||||||| Sbjct: 20442227 ttcgtgttcggggactccctgacggacaacgggaacaacaacgacatgacgtcgctggcc 20442286 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||||||||||| |||||||||||||||||| ||||||| | ||||| |||||| | Sbjct: 20442287 aaggccaactacctcccctacggcatcgacttcgccggcggcccaaccggccgcttctcc 20442346 Query: 360 aacggc 365 |||||| Sbjct: 20442347 aacggc 20442352 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 292 cgctggcgcgggccaactacccgccctacggcatcgacttccccggcgg 340 |||||| ||| ||| || || ||||||||||| ||||||||||||||| Sbjct: 22849085 cgctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcgg 22849037
>ref|NM_191862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1092 Score = 186 bits (94), Expect = 4e-44 Identities = 178/206 (86%) Strand = Plus / Plus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||| | ||||| |||||||| || ||||| || ||||||||| Sbjct: 79 ccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaacaacaac 138 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgga 341 |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 139 tacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 198 Query: 342 gccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatctctcggcttctgggc 401 | |||| || |||| ||||||||||||||||||||||| |||| ||| || |||||| Sbjct: 199 ccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatcgctcaactcctgggc 258 Query: 402 ttcgacgactacatcccagcgtacgc 427 |||||| ||| |||||| ||||||| Sbjct: 259 ttcgacaacttcatcccgccgtacgc 284
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 168 bits (85), Expect = 1e-38 Identities = 145/165 (87%) Strand = Plus / Plus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||| | ||||| |||||||| || ||||| || ||||||||| Sbjct: 143614 ccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaacaacaac 143673 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgga 341 |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 143674 tacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 143733 Query: 342 gccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatc 386 | |||| || |||| ||||||||||||||||||||||| |||| Sbjct: 143734 ccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatc 143778
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 168 bits (85), Expect = 1e-38 Identities = 145/165 (87%) Strand = Plus / Plus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||| | ||||| |||||||| || ||||| || ||||||||| Sbjct: 41022 ccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaacaacaac 41081 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgga 341 |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 41082 tacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 41141 Query: 342 gccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatc 386 | |||| || |||| ||||||||||||||||||||||| |||| Sbjct: 41142 ccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatc 41186
>dbj|AK070946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074K21, full insert sequence Length = 2149 Score = 168 bits (85), Expect = 1e-38 Identities = 145/165 (87%) Strand = Plus / Plus Query: 222 ccgcaggtgccgtgctacttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||||||||||||| | ||||| |||||||| || ||||| || ||||||||| Sbjct: 175 ccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaacaacaac 234 Query: 282 gacatcgcgtcgctggcgcgggccaactacccgccctacggcatcgacttccccggcgga 341 |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 235 tacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 294 Query: 342 gccaccgggcgcttcagcaacggcctcaccaccgtcgacgccatc 386 | |||| || |||| ||||||||||||||||||||||| |||| Sbjct: 295 ccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatc 339
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 99.6 bits (50), Expect = 8e-18 Identities = 107/126 (84%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||| ||| |||||| ||||||||||||||||| |||||||||| Sbjct: 113972 ttcgtgttcggggactccctgacggacaacgggaacaacaacgacatgacgtcgctggcc 114031 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||||||||||| |||||||||||||||||| ||||||| | ||||| |||||| | Sbjct: 114032 aaggccaactacctcccctacggcatcgacttcgccggcggcccaaccggccgcttctcc 114091 Query: 360 aacggc 365 |||||| Sbjct: 114092 aacggc 114097
>dbj|AK100958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K23, full insert sequence Length = 1556 Score = 99.6 bits (50), Expect = 8e-18 Identities = 107/126 (84%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||| ||| |||||| ||||||||||||||||| |||||||||| Sbjct: 218 ttcgtgttcggggactccctgacggacaacgggaacaacaacgacatgacgtcgctggcc 277 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||||||||||| |||||||||||||||||| ||||||| | ||||| |||||| | Sbjct: 278 aaggccaactacctcccctacggcatcgacttcgccggcggcccaaccggccgcttctcc 337 Query: 360 aacggc 365 |||||| Sbjct: 338 aacggc 343
>gb|BT018449.1| Zea mays clone EL01N0407B08.d mRNA sequence Length = 1302 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||||||| |||||| || |||||||||||| | ||||| || Sbjct: 51 ttcgtgttcggggactcgctgacggacaacggcaacaacaacgacctgaactcgctcgcc 110 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| | Sbjct: 111 aaggctaactacccgccctacggcatcgacttcgccggcggccccaccggccgcttctcc 170 Query: 360 aacggc 365 |||||| Sbjct: 171 aacggc 176
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 5e-13 Identities = 109/129 (84%), Gaps = 3/129 (2%) Strand = Plus / Minus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||||||||||||| || ||||||||| ||||| | |||||||| ||| Sbjct: 10070980 ttcggcgactcgctggtggacagcggcaacaacaacaacatcctgagcctggcgcgcgcc 10070921 Query: 306 aactacccgccctacggcatcgacttccccg--gcggagccacc-gggcgcttcagcaac 362 ||||||| ||||||||| ||||||||| ||| |||| ||| || |||||||||| |||| Sbjct: 10070920 aactaccagccctacgggatcgacttctccggcgcggcgccgccggggcgcttcaccaac 10070861 Query: 363 ggcctcacc 371 ||||||||| Sbjct: 10070860 ggcctcacc 10070852 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cgtgttcggagactcgctggtggac 266 ||||||||| ||||||||||||||| Sbjct: 23332583 cgtgttcggcgactcgctggtggac 23332559
>dbj|AK063071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H02, full insert sequence Length = 987 Score = 83.8 bits (42), Expect = 5e-13 Identities = 109/129 (84%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||||||||||||| || ||||||||| ||||| | |||||||| ||| Sbjct: 176 ttcggcgactcgctggtggacagcggcaacaacaacaacatcctgagcctggcgcgcgcc 235 Query: 306 aactacccgccctacggcatcgacttccccg--gcggagccacc-gggcgcttcagcaac 362 ||||||| ||||||||| ||||||||| ||| |||| ||| || |||||||||| |||| Sbjct: 236 aactaccagccctacgggatcgacttctccggcgcggcgccgccggggcgcttcaccaac 295 Query: 363 ggcctcacc 371 ||||||||| Sbjct: 296 ggcctcacc 304
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 5e-13 Identities = 109/129 (84%), Gaps = 3/129 (2%) Strand = Plus / Minus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||||||||||||| || ||||||||| ||||| | |||||||| ||| Sbjct: 10070865 ttcggcgactcgctggtggacagcggcaacaacaacaacatcctgagcctggcgcgcgcc 10070806 Query: 306 aactacccgccctacggcatcgacttccccg--gcggagccacc-gggcgcttcagcaac 362 ||||||| ||||||||| ||||||||| ||| |||| ||| || |||||||||| |||| Sbjct: 10070805 aactaccagccctacgggatcgacttctccggcgcggcgccgccggggcgcttcaccaac 10070746 Query: 363 ggcctcacc 371 ||||||||| Sbjct: 10070745 ggcctcacc 10070737 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cgtgttcggagactcgctggtggac 266 ||||||||| ||||||||||||||| Sbjct: 23260774 cgtgttcggcgactcgctggtggac 23260750
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 83.8 bits (42), Expect = 5e-13 Identities = 109/129 (84%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||||||||||||| || ||||||||| ||||| | |||||||| ||| Sbjct: 91641 ttcggcgactcgctggtggacagcggcaacaacaacaacatcctgagcctggcgcgcgcc 91700 Query: 306 aactacccgccctacggcatcgacttccccg--gcggagccacc-gggcgcttcagcaac 362 ||||||| ||||||||| ||||||||| ||| |||| ||| || |||||||||| |||| Sbjct: 91701 aactaccagccctacgggatcgacttctccggcgcggcgccgccggggcgcttcaccaac 91760 Query: 363 ggcctcacc 371 ||||||||| Sbjct: 91761 ggcctcacc 91769
>ref|XM_507096.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.26 mRNA Length = 1449 Score = 75.8 bits (38), Expect = 1e-10 Identities = 116/142 (81%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||||||| | ||||| |||||||||||| || | |||||| | || Sbjct: 169 ttcgtgttcggcgactcgctgatcgacaacgggaacaacaacaacctggcgtcgttcgcc 228 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||| |||||| |||||||||||||||||| ||| ||| | ||||| |||||| || Sbjct: 229 aaggcgaactactacccctacggcatcgacttcgccgccggcccaaccggccgcttctgc 288 Query: 360 aacggcctcaccaccgtcgacg 381 |||||| ||||| |||||||| Sbjct: 289 aacggctacaccatcgtcgacg 310
>ref|XM_479754.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1327 Score = 75.8 bits (38), Expect = 1e-10 Identities = 116/142 (81%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||||||| | ||||| |||||||||||| || | |||||| | || Sbjct: 177 ttcgtgttcggcgactcgctgatcgacaacgggaacaacaacaacctggcgtcgttcgcc 236 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||| |||||| |||||||||||||||||| ||| ||| | ||||| |||||| || Sbjct: 237 aaggcgaactactacccctacggcatcgacttcgccgccggcccaaccggccgcttctgc 296 Query: 360 aacggcctcaccaccgtcgacg 381 |||||| ||||| |||||||| Sbjct: 297 aacggctacaccatcgtcgacg 318
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 75.8 bits (38), Expect = 1e-10 Identities = 116/142 (81%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||||||| | ||||| |||||||||||| || | |||||| | || Sbjct: 680116 ttcgtgttcggcgactcgctgatcgacaacgggaacaacaacaacctggcgtcgttcgcc 680175 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||| |||||| |||||||||||||||||| ||| ||| | ||||| |||||| || Sbjct: 680176 aaggcgaactactacccctacggcatcgacttcgccgccggcccaaccggccgcttctgc 680235 Query: 360 aacggcctcaccaccgtcgacg 381 |||||| ||||| |||||||| Sbjct: 680236 aacggctacaccatcgtcgacg 680257 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||| || |||||||||||||||| || ||||||||| Sbjct: 28339356 ttcgtgtttggcgactcgctggtggacagcggcaacaacaac 28339397
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 75.8 bits (38), Expect = 1e-10 Identities = 116/142 (81%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||||||| | ||||| |||||||||||| || | |||||| | || Sbjct: 107494 ttcgtgttcggcgactcgctgatcgacaacgggaacaacaacaacctggcgtcgttcgcc 107553 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||| |||||| |||||||||||||||||| ||| ||| | ||||| |||||| || Sbjct: 107554 aaggcgaactactacccctacggcatcgacttcgccgccggcccaaccggccgcttctgc 107613 Query: 360 aacggcctcaccaccgtcgacg 381 |||||| ||||| |||||||| Sbjct: 107614 aacggctacaccatcgtcgacg 107635
>dbj|AK105876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B10, full insert sequence Length = 1449 Score = 75.8 bits (38), Expect = 1e-10 Identities = 116/142 (81%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||||||| | ||||| |||||||||||| || | |||||| | || Sbjct: 169 ttcgtgttcggcgactcgctgatcgacaacgggaacaacaacaacctggcgtcgttcgcc 228 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||| |||||| |||||||||||||||||| ||| ||| | ||||| |||||| || Sbjct: 229 aaggcgaactactacccctacggcatcgacttcgccgccggcccaaccggccgcttctgc 288 Query: 360 aacggcctcaccaccgtcgacg 381 |||||| ||||| |||||||| Sbjct: 289 aacggctacaccatcgtcgacg 310
>dbj|AK069672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A20, full insert sequence Length = 1327 Score = 75.8 bits (38), Expect = 1e-10 Identities = 116/142 (81%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcg 299 ||||||||||| ||||||||| | ||||| |||||||||||| || | |||||| | || Sbjct: 177 ttcgtgttcggcgactcgctgatcgacaacgggaacaacaacaacctggcgtcgttcgcc 236 Query: 300 cgggccaactacccgccctacggcatcgacttccccggcggagccaccgggcgcttcagc 359 ||| |||||| |||||||||||||||||| ||| ||| | ||||| |||||| || Sbjct: 237 aaggcgaactactacccctacggcatcgacttcgccgccggcccaaccggccgcttctgc 296 Query: 360 aacggcctcaccaccgtcgacg 381 |||||| ||||| |||||||| Sbjct: 297 aacggctacaccatcgtcgacg 318
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene (Enod) related protein (OSJNBa0071K18.9), mRNA Length = 1384 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| ||||||||||||||||| || || |||||| Sbjct: 119 cttcgtgttcggcgactcgctggtggacaacggcaataacaac 161
>ref|XM_473111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| |||||||| |||||||| || ||||||||| Sbjct: 96 cttcgtgttcggggactcgctcgtggacaacggcaacaacaac 138
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| ||||||||||||||||| || || |||||| Sbjct: 103354 cttcgtgttcggcgactcgctggtggacaacggcaataacaac 103312
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| |||||||| |||||||| || ||||||||| Sbjct: 126340 cttcgtgttcggggactcgctcgtggacaacggcaacaacaac 126382
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| |||||||| |||||||| || ||||||||| Sbjct: 68960 cttcgtgttcggggactcgctcgtggacaacggcaacaacaac 69002
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| |||||||| |||||||| || ||||||||| Sbjct: 25342401 cttcgtgttcggggactcgctcgtggacaacggcaacaacaac 25342443
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| ||||||||||||||||| || || |||||| Sbjct: 16556888 cttcgtgttcggcgactcgctggtggacaacggcaataacaac 16556930 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 15233807 caagcagctagctactcctagctagc 15233782
>dbj|AK121383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127I10, full insert sequence Length = 1929 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| |||||||| |||||||| || ||||||||| Sbjct: 598 cttcgtgttcggggactcgctcgtggacaacggcaacaacaac 640
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| ||||||||||||||||| || || |||||| Sbjct: 131 cttcgtgttcggcgactcgctggtggacaacggcaataacaac 173
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||||| ||||||||||||||||| || || |||||| Sbjct: 16565129 cttcgtgttcggcgactcgctggtggacaacggcaataacaac 16565171 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 15242048 caagcagctagctactcctagctagc 15242023
>gb|AY106609.1| Zea mays PCO140750 mRNA sequence Length = 634 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Plus Query: 239 cttcgtgttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggc 298 |||||||||||| ||||| || |||||||| || ||||||||| || || | | ||| Sbjct: 200 cttcgtgttcggggactccctcgtggacaacggcaacaacaactacctcatgaccacggc 259 Query: 299 gcgggccaactacccgccctacggcatcgacttcccc 335 ||||||| || ||||||||||| |||||||||||| Sbjct: 260 gcgggccgacgcgccgccctacgggatcgacttcccc 296
>ref|XM_465039.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1182 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccggcgg 340 ||||||||||||||||||||||| Sbjct: 226 tacggcatcgacttccccggcgg 248
>ref|XM_465038.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1397 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccggcgg 340 ||||||||||||||||||||||| Sbjct: 220 tacggcatcgacttccccggcgg 242
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 117 agcgcggcggcgagagaaatgga 139 ||||||||||||||||||||||| Sbjct: 1454966 agcgcggcggcgagagaaatgga 1454944
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccggcgg 340 ||||||||||||||||||||||| Sbjct: 11093132 tacggcatcgacttccccggcgg 11093154 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccggcgg 340 ||||||||||||||||||||||| Sbjct: 11071011 tacggcatcgacttccccggcgg 11071033 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 26459972 caagcagctagctactcctagctagc 26459947 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 241 tcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 4944868 tcgtgttcggggactcgacggtggacacggggaacaacaac 4944908 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccctacggcatcgacttccc 334 |||||||||||||||||||| Sbjct: 30985661 ccctacggcatcgacttccc 30985642 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ccgggcggagcgcgcgcgcc 218 |||||||||||||||||||| Sbjct: 29975469 ccgggcggagcgcgcgcgcc 29975450 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccgg 337 |||||||||||||||||||| Sbjct: 11101648 tacggcatcgacttccccgg 11101667
>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_E11 Length = 133524 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccggcgg 340 ||||||||||||||||||||||| Sbjct: 75826 tacggcatcgacttccccggcgg 75848 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccggcgg 340 ||||||||||||||||||||||| Sbjct: 53705 tacggcatcgacttccccggcgg 53727 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccgg 337 |||||||||||||||||||| Sbjct: 84342 tacggcatcgacttccccgg 84361
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccggcgg 340 ||||||||||||||||||||||| Sbjct: 12311 tacggcatcgacttccccggcgg 12333 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccgg 337 |||||||||||||||||||| Sbjct: 20827 tacggcatcgacttccccgg 20846
>dbj|AK101883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070K23, full insert sequence Length = 1397 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccggcgg 340 ||||||||||||||||||||||| Sbjct: 220 tacggcatcgacttccccggcgg 242
>dbj|AP006697.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT41M05, TM0404, complete sequence Length = 103744 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 234 tgctacttcgtgttcggagactcgctggtggacaatgggaacaacaa 280 ||||||||| | || || ||||| |||||||||||||||||||||| Sbjct: 82838 tgctacttcatttttggtgactctttggtggacaatgggaacaacaa 82884
>dbj|AP004519.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT07K08, TM0046b, complete sequence Length = 71321 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 234 tgctacttcgtgttcggagactcgctggtggacaatgggaacaacaa 280 ||||||||| | || || ||||| |||||||||||||||||||||| Sbjct: 60032 tgctacttcatttttggtgactctttggtggacaatgggaacaacaa 60078
>ref|NM_121848.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on ester bonds AT5G18430 mRNA, complete cds Length = 1089 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||| |||||||| || |||| ||| ||||||||| Sbjct: 88 ttcgtgttcggtgactcgctcgtcgacagtggcaacaacaac 129
>gb|BT020307.1| Arabidopsis thaliana At5g18430 gene, complete cds Length = 1269 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||| |||||||| || |||| ||| ||||||||| Sbjct: 183 ttcgtgttcggtgactcgctcgtcgacagtggcaacaacaac 224
>ref|XM_483839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||| || |||||||||||||||| || ||||||||| Sbjct: 222 ttcgtgtttggcgactcgctggtggacagcggcaacaacaac 263
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 128718 caagcagctagctactcctagctagc 128693
>gb|AC115802.10| Mus musculus, clone RP23-408J7, complete sequence Length = 185710 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 tccacccacctacctacccagc 46 |||||||||||||||||||||| Sbjct: 141788 tccacccacctacctacccagc 141767
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 87506 caagcagctagctactcctagctagc 87481
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 28170163 caagcagctagctactcctagctagc 28170138
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||| ||||||||||||||| || ||||||||| Sbjct: 21100142 ttcgtgttcgggagctcgctggtggacaacggcaacaacaac 21100183 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaaca 276 ||||||||||| |||||||||| ||||| ||||||| Sbjct: 2897964 ttcgtgttcggggactcgctggcggacacggggaaca 2898000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 agctagctactactagctag 110 |||||||||||||||||||| Sbjct: 21319807 agctagctactactagctag 21319826 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 actacccgccctacggcatcgacttccc 334 ||||| ||||||||||| |||||||||| Sbjct: 21100215 actacgcgccctacggcgtcgacttccc 21100242 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 caagcagctagctactactagcta 109 |||||||||||||||| ||||||| Sbjct: 10726332 caagcagctagctactcctagcta 10726309
>gb|AC051626.5|AC051626 Genomic Sequence For Arabidopsis thaliana Clone F20L16 From Chromosome V, complete sequence Length = 96050 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||| |||||||| || |||| ||| ||||||||| Sbjct: 58953 ttcgtgttcggtgactcgctcgtcgacagtggcaacaacaac 58912
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 59888 caagcagctagctactcctagctagc 59863
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||| ||||||||||||||| || ||||||||| Sbjct: 97143 ttcgtgttcgggagctcgctggtggacaacggcaacaacaac 97184 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 actacccgccctacggcatcgacttccc 334 ||||| ||||||||||| |||||||||| Sbjct: 97216 actacgcgccctacggcgtcgacttccc 97243
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 2353 caagcagctagctactcctagctagc 2328
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||| || |||||||||||||||| || ||||||||| Sbjct: 68162 ttcgtgtttggcgactcgctggtggacagcggcaacaacaac 68203
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||| || |||||||||||||||| || ||||||||| Sbjct: 131171 ttcgtgtttggcgactcgctggtggacagcggcaacaacaac 131212
>dbj|AK106778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H02, full insert sequence Length = 1523 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||| || |||||||||||||||| || ||||||||| Sbjct: 222 ttcgtgtttggcgactcgctggtggacagcggcaacaacaac 263
>gb|BT020574.1| Arabidopsis thaliana At5g18430 gene, complete cds Length = 1089 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaacaacaac 281 ||||||||||| |||||||| || |||| ||| ||||||||| Sbjct: 88 ttcgtgttcggtgactcgctcgtcgacagtggcaacaacaac 129
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 28155041 caagcagctagctactcctagctagc 28155016
>emb|AL935206.8| Zebrafish DNA sequence from clone CH211-254A7, complete sequence Length = 169723 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tccgtccacccacctacctacc 42 |||||||||||||||||||||| Sbjct: 115620 tccgtccacccacctacctacc 115599
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 caagcagctagctactactagctagc 111 |||||||||||||||| ||||||||| Sbjct: 165672 caagcagctagctactcctagctagc 165647
>ref|XM_475407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 292 cgctggcgcgggccaactacccgccctacggcatcgacttccccggcgg 340 |||||| ||| ||| || || ||||||||||| ||||||||||||||| Sbjct: 182 cgctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcgg 230
>ref|XM_464400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1310 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 241 tcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 184 tcgtgttcggggactcgacggtggacacggggaacaacaac 224
>ref|XM_469323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1438 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||| |||||||| |||||||||||| | ||| |||||| ||| ||| Sbjct: 169 ttcggggactcggtggtggacgccgggaacaacaaccggctggcgacgctggtgcgcgcc 228 Query: 306 aactacccgccctacggcatcgacttccc 334 ||| ||||||||||||| ||||||||| Sbjct: 229 gacttcccgccctacggccgcgacttccc 257
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 agctactactagctagctaag 115 ||||||||||||||||||||| Sbjct: 77243 agctactactagctagctaag 77263
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 292 cgctggcgcgggccaactacccgccctacggcatcgacttccccggcgg 340 |||||| ||| ||| || || ||||||||||| ||||||||||||||| Sbjct: 47789 cgctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcgg 47741
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 agctactactagctagctaag 115 ||||||||||||||||||||| Sbjct: 29694134 agctactactagctagctaag 29694114 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||| |||||||| |||||||||||| | ||| |||||| ||| ||| Sbjct: 26960758 ttcggggactcggtggtggacgccgggaacaacaaccggctggcgacgctggtgcgcgcc 26960817 Query: 306 aactacccgccctacggcatcgacttccc 334 ||| ||||||||||||| ||||||||| Sbjct: 26960818 gacttcccgccctacggccgcgacttccc 26960846 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 gccaccgggcgcttcagcaacggc 365 |||||||| ||||||||||||||| Sbjct: 21089652 gccaccggccgcttcagcaacggc 21089629
>ref|XM_822469.1| Trypanosoma brucei TREU927 ubiquitin-protein ligase (Tb09.211.4210) partial mRNA Length = 5739 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 acaacaacgacatcgcgtcgctggc 298 |||||||||||||||| |||||||| Sbjct: 5236 acaacaacgacatcgcctcgctggc 5212
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||| |||||||| |||||||||||| | ||| |||||| ||| ||| Sbjct: 139758 ttcggggactcggtggtggacgccgggaacaacaaccggctggcgacgctggtgcgcgcc 139817 Query: 306 aactacccgccctacggcatcgacttccc 334 ||| ||||||||||||| ||||||||| Sbjct: 139818 gacttcccgccctacggccgcgacttccc 139846
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 agctactactagctagctaag 115 ||||||||||||||||||||| Sbjct: 29785556 agctactactagctagctaag 29785536 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||| |||||||| |||||||||||| | ||| |||||| ||| ||| Sbjct: 27052081 ttcggggactcggtggtggacgccgggaacaacaaccggctggcgacgctggtgcgcgcc 27052140 Query: 306 aactacccgccctacggcatcgacttccc 334 ||| ||||||||||||| ||||||||| Sbjct: 27052141 gacttcccgccctacggccgcgacttccc 27052169 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 gccaccgggcgcttcagcaacggc 365 |||||||| ||||||||||||||| Sbjct: 21082681 gccaccggccgcttcagcaacggc 21082658
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Minus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||| |||||||| |||||||||||| | ||| |||||| ||| ||| Sbjct: 98641 ttcggggactcggtggtggacgccgggaacaacaaccggctggcgacgctggtgcgcgcc 98582 Query: 306 aactacccgccctacggcatcgacttccc 334 ||| ||||||||||||| ||||||||| Sbjct: 98581 gacttcccgccctacggccgcgacttccc 98553
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 241 tcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 15994 tcgtgttcggggactcgacggtggacacggggaacaacaac 16034
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 241 tcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 89607 tcgtgttcggggactcgacggtggacacggggaacaacaac 89647
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaaca 276 ||||||||||| |||||||||| ||||| ||||||| Sbjct: 141445 ttcgtgttcggggactcgctggcggacacggggaaca 141481
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaaca 276 ||||||||||| |||||||||| ||||| ||||||| Sbjct: 58110 ttcgtgttcggggactcgctggcggacacggggaaca 58146
>dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D10, full insert sequence Length = 1439 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 240 ttcgtgttcggagactcgctggtggacaatgggaaca 276 ||||||||||| |||||||||| ||||| ||||||| Sbjct: 186 ttcgtgttcggggactcgctggcggacacggggaaca 222
>dbj|AK099266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013F22, full insert sequence Length = 1508 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||| |||||||| |||||||||||| | ||| |||||| ||| ||| Sbjct: 182 ttcggggactcggtggtggacgccgggaacaacaaccggctggcgacgctggtgcgcgcc 241 Query: 306 aactacccgccctacggcatcgacttccc 334 ||| ||||||||||||| ||||||||| Sbjct: 242 gacttcccgccctacggccgcgacttccc 270
>dbj|AK071697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108M03, full insert sequence Length = 1582 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cgtgttcggagactcgctggtggac 266 ||||||||| ||||||||||||||| Sbjct: 171 cgtgttcggcgactcgctggtggac 195
>dbj|AK070277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050D08, full insert sequence Length = 1741 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cgtgttcggagactcgctggtggac 266 ||||||||| ||||||||||||||| Sbjct: 171 cgtgttcggcgactcgctggtggac 195
>dbj|AK064681.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A05, full insert sequence Length = 1385 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 292 cgctggcgcgggccaactacccgccctacggcatcgacttccccggcgg 340 |||||| ||| ||| || || ||||||||||| ||||||||||||||| Sbjct: 222 cgctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcgg 270
>dbj|AK060691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C02, full insert sequence Length = 1310 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 241 tcgtgttcggagactcgctggtggacaatgggaacaacaac 281 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 184 tcgtgttcggggactcgacggtggacacggggaacaacaac 224
>dbj|AK060516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-A02, full insert sequence Length = 1482 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 246 ttcggagactcgctggtggacaatgggaacaacaacgacatcgcgtcgctggcgcgggcc 305 ||||| |||||| |||||||| |||||||||||| | ||| |||||| ||| ||| Sbjct: 181 ttcggggactcggtggtggacgccgggaacaacaaccggctggcgacgctggtgcgcgcc 240 Query: 306 aactacccgccctacggcatcgacttccc 334 ||| ||||||||||||| ||||||||| Sbjct: 241 gacttcccgccctacggccgcgacttccc 269
>dbj|AK060201.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-G04, full insert sequence Length = 1637 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cgtgttcggagactcgctggtggac 266 ||||||||| ||||||||||||||| Sbjct: 245 cgtgttcggcgactcgctggtggac 269
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cgtgttcggagactcgctggtggac 266 ||||||||| ||||||||||||||| Sbjct: 145701 cgtgttcggcgactcgctggtggac 145677
>ref|XM_467708.1| Oryza sativa (japonica cultivar-group), mRNA Length = 872 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ccctacggcatcgacttccc 334 |||||||||||||||||||| Sbjct: 432 ccctacggcatcgacttccc 451
>ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.12-1 mRNA Length = 1637 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ccctacggcatcgacttccc 334 |||||||||||||||||||| Sbjct: 429 ccctacggcatcgacttccc 448
>ref|XM_467707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1637 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ccctacggcatcgacttccc 334 |||||||||||||||||||| Sbjct: 428 ccctacggcatcgacttccc 447
>ref|XM_465041.1| Oryza sativa (japonica cultivar-group), mRNA Length = 639 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tacggcatcgacttccccgg 337 |||||||||||||||||||| Sbjct: 559 tacggcatcgacttccccgg 578
>ref|XM_463028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 gccaccgggcgcttcagcaacggc 365 |||||||| ||||||||||||||| Sbjct: 205 gccaccggccgcttcagcaacggc 228
>gb|AC149058.7| Mus musculus BAC clone RP23-338G5 from chromosome 7, complete sequence Length = 219369 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 74178 tccacccacctacctaccca 74197
>emb|AL031635.1|CEY47D3B Caenorhabditis elegans YAC Y47D3B, complete sequence Length = 95968 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acccacctacctacccagct 47 |||||||||||||||||||| Sbjct: 18296 acccacctacctacccagct 18277
>gb|AC124765.2| Mus musculus BAC clone RP23-197D9 from 2, complete sequence Length = 191781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 88672 tccacccacctacctaccca 88691
>gb|AC115295.4| Mus musculus BAC clone RP23-188O19 from 3, complete sequence Length = 202201 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 76479 tccacccacctacctaccca 76460
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gaccgggcggagcgcgcgcgccga 220 ||||||||||| |||||||||||| Sbjct: 159875 gaccgggcggatcgcgcgcgccga 159852
>emb|AL136528.11| Human DNA sequence from clone RP5-1092A11 on chromosome 1p36.2-36.33 Contains the 5' end of the gene for a novel protein (FLJ32825), a novel gene (KIAA0495), two novel genes, the TP73 gene for tumor protein p73, the 5' end of the WDR8 gene for WD repeat domain 8 and five CpG islands, complete sequence Length = 138941 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 43788 tccacccacctacctaccca 43807
>emb|BX004823.23| Zebrafish DNA sequence from clone DKEY-13A3 in linkage group 14, complete sequence Length = 197683 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 111824 tccacccacctacctaccca 111843
>gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, complete sequence Length = 214098 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 89397 tccacccacctacctaccca 89416
>gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, complete sequence Length = 199776 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 46859 tccacccacctacctaccca 46878
>gb|AE006009.1| Caulobacter crescentus CB15 section 335 of 359 of the complete genome Length = 12052 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 ccgggcggagcgcgcgcgccgatc 222 |||| ||||||||||||||||||| Sbjct: 3921 ccggccggagcgcgcgcgccgatc 3898
>gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genomic sequence, complete sequence Length = 131250 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 gccaccgggcgcttcagcaacggc 365 |||||||| ||||||||||||||| Sbjct: 67408 gccaccggccgcttcagcaacggc 67385
>gb|AC145899.4| Pan troglodytes BAC clone RP43-19O5 from chromosome 7, complete sequence Length = 176118 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 72752 tccacccacctacctaccca 72733
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ccgggcggagcgcgcgcgcc 218 |||||||||||||||||||| Sbjct: 3755147 ccgggcggagcgcgcgcgcc 3755128
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccctacggcatcgacttccc 334 |||||||||||||||||||| Sbjct: 40617 ccctacggcatcgacttccc 40598
>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036B02 Length = 168253 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 caagcagctagctactactagcta 109 |||||||||||||||| ||||||| Sbjct: 79395 caagcagctagctactcctagcta 79372
>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0656E03 Length = 181786 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 agctagctactactagctag 110 |||||||||||||||||||| Sbjct: 115183 agctagctactactagctag 115202
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ccgggcggagcgcgcgcgcc 218 |||||||||||||||||||| Sbjct: 75745 ccgggcggagcgcgcgcgcc 75726
>dbj|AK111360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-H05, full insert sequence Length = 888 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ccctacggcatcgacttccc 334 |||||||||||||||||||| Sbjct: 432 ccctacggcatcgacttccc 451
>dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K19, full insert sequence Length = 1637 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ccctacggcatcgacttccc 334 |||||||||||||||||||| Sbjct: 428 ccctacggcatcgacttccc 447
>dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P13, full insert sequence Length = 1637 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ccctacggcatcgacttccc 334 |||||||||||||||||||| Sbjct: 429 ccctacggcatcgacttccc 448
>dbj|AK063332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A03, full insert sequence Length = 1349 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 actacccgccctacggcatcgacttccc 334 ||||| ||||||||||| |||||||||| Sbjct: 262 actacgcgccctacggcgtcgacttccc 289
>dbj|AP000610.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-21K8, complete sequence Length = 26000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 6479 tccacccacctacctaccca 6498
>emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chromosome 2, complete sequence Length = 219568 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 214338 tccacccacctacctaccca 214319
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cctcaccaccgtcgacgcca 384 |||||||||||||||||||| Sbjct: 870493 cctcaccaccgtcgacgcca 870474
>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence Length = 198621 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 161404 tccacccacctacctaccca 161423
>emb|CT027693.11| Mouse DNA sequence from clone RP24-120H1 on chromosome 16, complete sequence Length = 186376 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 26804 tccacccacctacctaccca 26823
>emb|AL591854.18| Mouse DNA sequence from clone RP23-105M23 on chromosome 2, complete sequence Length = 187181 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tccacccacctacctaccca 44 |||||||||||||||||||| Sbjct: 103527 tccacccacctacctaccca 103508 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,394,487 Number of Sequences: 3902068 Number of extensions: 2394487 Number of successful extensions: 44609 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 43200 Number of HSP's gapped (non-prelim): 1394 length of query: 457 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 435 effective length of database: 17,147,199,772 effective search space: 7459031900820 effective search space used: 7459031900820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
