ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet32b09 |
|---|---|
| Clone Library Name | barley_pub |
>TAR1_KLULA (Q6CQE5) Protein TAR1| Length = 109 Score = 66.2 bits (160), Expect = 3e-11 Identities = 33/63 (52%), Positives = 38/63 (60%) Frame = -3 Query: 289 TCSLSVSRLYLALDGVYRPIWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLSRGLGPGP 110 TCSLSVSR YLALDG+Y P+ AAFPNN TR P TG SPS S+ GP Sbjct: 30 TCSLSVSRQYLALDGIYHPLRAAFPNNSTRRKHFTNNWDPRHTGFSPSMTSCSKEHRQGP 89 Query: 109 SLR 101 + + Sbjct: 90 ATK 92
>TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA| protein 1) Length = 124 Score = 60.8 bits (146), Expect = 1e-09 Identities = 38/95 (40%), Positives = 44/95 (46%) Frame = -3 Query: 412 TSKSRSAYGRGASPAPIRFPPGNXXXXXXXXXXXXXXFPRGTCSLSVSRLYLALDGVYRP 233 T K + A + P FP N F TCSLSVSR YLALDG+Y P Sbjct: 6 THKEQRAQNTMSDQMP--FPFNNFTYFFTLFSKFFSSFHHCTCSLSVSRQYLALDGIYHP 63 Query: 232 IWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLSR 128 + AAFPNN T + P TG SPS S+ Sbjct: 64 LRAAFPNNSTLRRHFTKNRTPRHTGFSPSMTSCSK 98
>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 34.3 bits (77), Expect = 0.13 Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Frame = -3 Query: 196 PRLVGRQGPGRTGLSPSQAPLSRGLG------PGPSLRTRLQTTIRTAQPPDSQAGLFPV 35 P V R+ GRT SP APLSRG G PG S + T R + P+ + L Sbjct: 180 PPEVNRREEGRTSESPEVAPLSRGPGRHEMHAPGSSADLQPDTWSRRTRSPEPFSPLSRP 239 Query: 34 RSPL 23 SPL Sbjct: 240 PSPL 243
>ARX_MOUSE (O35085) Homeobox protein ARX (Aristaless-related homeobox)| Length = 564 Score = 34.3 bits (77), Expect = 0.13 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -1 Query: 195 RASWGDRVRAGRGSHPPRRPFPGDL 121 RA W R +AG +HPP PFPG L Sbjct: 382 RAKWRKREKAGAQTHPPGLPFPGPL 406
>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)| Length = 562 Score = 34.3 bits (77), Expect = 0.13 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -1 Query: 195 RASWGDRVRAGRGSHPPRRPFPGDL 121 RA W R +AG +HPP PFPG L Sbjct: 380 RAKWRKREKAGAQTHPPGLPFPGPL 404
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 33.9 bits (76), Expect = 0.17 Identities = 27/85 (31%), Positives = 30/85 (35%) Frame = +1 Query: 28 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 207 A EPG P G A DR + GAPG P P P P G + Sbjct: 963 AGEPGREGSPGADGPPGR--DGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDR 1020 Query: 208 GCLGMQPKSGGRLRPRLNTGERPIA 282 G G Q G + P G R IA Sbjct: 1021 GEAGAQ----GPMGPSGPAGARGIA 1041 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -2 Query: 218 PKQPDSLTAPRGATGS-GPDGALTLPGA 138 P+ P +T P+GA G+ GP GA PGA Sbjct: 806 PQGPTGVTGPKGARGAQGPPGATGFPGA 833 Score = 30.0 bits (66), Expect = 2.5 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRLRPRLNTGERPIANKY 291 GAPG AP P P P G +G LG + ++G G P+ TG P + Sbjct: 355 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETG--PAGPQG 412 Query: 292 REGKMKRTLKRESKSA*NCREGSGWGPAMRPG 387 G KR ++ E G GP PG Sbjct: 413 APGPAGEEGKRGARG-----EPGGAGPIGPPG 439
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 33.9 bits (76), Expect = 0.17 Identities = 27/85 (31%), Positives = 30/85 (35%) Frame = +1 Query: 28 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 207 A EPG P G A DR + GAPG P P P P G + Sbjct: 1003 AGEPGREGSPGADGPPGR--DGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDR 1060 Query: 208 GCLGMQPKSGGRLRPRLNTGERPIA 282 G G Q G + P G R IA Sbjct: 1061 GEAGAQ----GPMGPSGPAGARGIA 1081 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -2 Query: 218 PKQPDSLTAPRGATGS-GPDGALTLPGA 138 P+ P +T P+GA G+ GP GA PGA Sbjct: 846 PQGPTGVTGPKGARGAQGPPGATGFPGA 873 Score = 29.3 bits (64), Expect = 4.2 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRLRPRLNTGERPIANKY 291 GAPG AP P P P G +G LG + ++G G P+ TG P + Sbjct: 395 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETG--PAGPQG 452 Query: 292 REGKMKRTLKRESKSA*NCREGSGWGPAMRPG 387 G KR ++ E G GP PG Sbjct: 453 APGPAGEEGKRGARG-----EPGGAGPIGPPG 479
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 33.9 bits (76), Expect = 0.17 Identities = 27/89 (30%), Positives = 35/89 (39%) Frame = +1 Query: 25 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 204 T EPG ++ +P E G A + G PG +P P P P G + Sbjct: 200 TPGEPGVPA-QSEPLIPGE--PGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQ 256 Query: 205 SGCLGMQPKSGGRLRPRLNTGERPIANKY 291 G G P + G P + GER I KY Sbjct: 257 PGADG-NPGAPGPAGPPGSPGERGICPKY 284
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 33.1 bits (74), Expect = 0.29 Identities = 23/71 (32%), Positives = 27/71 (38%) Frame = +1 Query: 25 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 204 TA EPG +P G + DR + GAPG P P PV P G + Sbjct: 850 TAGEPGRDGNPGSDGLPGR--DGAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGD 907 Query: 205 SGCLGMQPKSG 237 G G SG Sbjct: 908 RGETGPAGPSG 918 Score = 29.3 bits (64), Expect = 4.2 Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 17/64 (26%) Frame = +1 Query: 133 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLN 261 +G PG AP P P PRG V SG G SG G PR N Sbjct: 953 RGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRGPVGPSGPPGKDGASGHPGPIGPPGPRGN 1012 Query: 262 TGER 273 GER Sbjct: 1013 RGER 1016 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +1 Query: 133 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 243 +G PG P GP P +G SG G K G R Sbjct: 569 QGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPR 605
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 32.7 bits (73), Expect = 0.38 Identities = 22/70 (31%), Positives = 24/70 (34%) Frame = +1 Query: 28 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 207 A EPG P G A DR + GAPG P P P P G + Sbjct: 962 AGEPGREGSPGADGPPGR--DGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDR 1019 Query: 208 GCLGMQPKSG 237 G G Q G Sbjct: 1020 GEAGAQGPMG 1029 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -2 Query: 218 PKQPDSLTAPRGATGS-GPDGALTLPGA 138 P+ P +T P+GA G+ GP GA PGA Sbjct: 805 PQGPTGVTGPKGARGAQGPPGATGFPGA 832
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 32.7 bits (73), Expect = 0.38 Identities = 28/94 (29%), Positives = 32/94 (34%), Gaps = 2/94 (2%) Frame = +1 Query: 16 PLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA 195 P A PG A A+ L G D G PG P P P+GA Sbjct: 188 PAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGA 247 Query: 196 VNESGCLGMQPKSG--GRLRPRLNTGERPIANKY 291 G G +SG G P GE+ I KY Sbjct: 248 PGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKY 281 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/49 (30%), Positives = 19/49 (38%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 G + D + G PG AP P P P G E+G G + G Sbjct: 154 GPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPG 202
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 32.3 bits (72), Expect = 0.50 Identities = 23/71 (32%), Positives = 25/71 (35%) Frame = +1 Query: 25 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 204 TA EPG P G DR + GAPG P P PV P G + Sbjct: 1005 TAGEPGRDGNPGSDGQPGR--DGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKSGD 1062 Query: 205 SGCLGMQPKSG 237 G G SG Sbjct: 1063 RGETGPAGPSG 1073 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 273 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAIGSPGPAGPRGPVGPHGPPGKDGTSGHPGPIGPPGPRGNRGER 1171 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/52 (32%), Positives = 20/52 (38%) Frame = +1 Query: 88 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 243 SG + + GAPG A P P PRG E+G G G R Sbjct: 1057 SGKSGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHR 1108
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 32.0 bits (71), Expect = 0.65 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 7/147 (4%) Frame = +1 Query: 10 RIPLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPR 189 ++ +++ +P Q + AA A + +RA+ P +G P+GP P PR Sbjct: 249 QVRVISRPDPAAVQAQAAAA---------AQAREERAERPDRGPRPAGARPAGPRPGGPR 299 Query: 190 GAVNESGCLGMQPKSG----GRLRPRLNTGERPIA---NKYREGKMKRTLKRESKSA*NC 348 + G P+SG G RP G+ A + + +G+ K+ ++ ++ Sbjct: 300 QGDSRPGDGRPAPRSGAPRPGGARPAAGFGQPAQAENSSPFADGQSKKKRQKGRRTVEFG 359 Query: 349 REGSGWGPAMRPGRMRNGSCWSAARLG 429 +G+G G MR G W+ + G Sbjct: 360 DKGAG-GKKMRED---VGGNWNRGKKG 382
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 32.0 bits (71), Expect = 0.65 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 219 G + DR + GAPG AP P PV P G + G G Sbjct: 590 GSPGAKGDRGETGPAGAPGPPGAPGAPGPVGPAGKSGDRGETG 632 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/70 (30%), Positives = 26/70 (37%) Frame = +1 Query: 28 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 207 A PG A VP +L + S A +G PG P P PRGA Sbjct: 214 AGPPGEAGKPGEQGVPGDLGAPGPSGARGE-----RGFPGERGVEGPPGPAGPRGANGAP 268 Query: 208 GCLGMQPKSG 237 G G + +G Sbjct: 269 GNDGAKGDAG 278
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 32.0 bits (71), Expect = 0.65 Identities = 22/71 (30%), Positives = 26/71 (36%) Frame = +1 Query: 25 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 204 TA EPG +P G DR + GAPG P P PV P G + Sbjct: 1006 TAGEPGRDGNPGSDGLPGR--DGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGD 1063 Query: 205 SGCLGMQPKSG 237 G G +G Sbjct: 1064 RGESGPAGPAG 1074 Score = 30.4 bits (67), Expect = 1.9 Identities = 34/106 (32%), Positives = 37/106 (34%), Gaps = 20/106 (18%) Frame = +1 Query: 16 PLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGA---PGRVRAP-------- 162 P A PG A +R A + GD +R KG PG AP Sbjct: 1069 PAGPAGAPGPAG--SRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQ 1126 Query: 163 ----SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 273 P P PRG V SG G SG G PR N GER Sbjct: 1127 QGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGER 1172
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 32.0 bits (71), Expect = 0.65 Identities = 23/71 (32%), Positives = 25/71 (35%) Frame = +1 Query: 25 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 204 TA EPG P G DR + GAPG P P PV P G + Sbjct: 1005 TAGEPGRDGNPGSDGQPGR--DGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKNGD 1062 Query: 205 SGCLGMQPKSG 237 G G SG Sbjct: 1063 RGETGPAGPSG 1073 Score = 31.6 bits (70), Expect = 0.85 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 273 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAVGSPGPAGPRGPVGPHGPPGKDGSSGHPGPIGPPGPRGNRGER 1171 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 243 GAPG A P P PRG E+G G G R Sbjct: 1073 GAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHR 1108 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 273 GAPG + A P P GA + G G K+G + P GER Sbjct: 404 GAPGLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGAR-GER 448
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 31.6 bits (70), Expect = 0.85 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 3/90 (3%) Frame = +1 Query: 16 PLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA 195 P+ PG P E G+ SA G+PG P P P P GA Sbjct: 469 PIGPQGLPGLKGEPGLPGPPGEGKVGEPGSAGPTGPPGVPGSPGLTGPPGPPGPPGPPGA 528 Query: 196 ---VNESGCLGMQPKSGGRLRPRLNTGERP 276 ++E+G G+ +GG L G +P Sbjct: 529 PGALDETGIAGLHLPNGGVEGAVLGKGGKP 558 Score = 25.4 bits (54), Expect(2) = 8.8 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Frame = -2 Query: 218 PKQPDSLTAPRGATGSGPDGALTLPGAP-FQG 126 P P L P G T G GA PG P F+G Sbjct: 153 PPGPPGLPGPSGITVPGKPGAQGAPGPPGFRG 184 Score = 21.2 bits (43), Expect(2) = 8.8 Identities = 10/30 (33%), Positives = 12/30 (40%) Frame = -1 Query: 429 PEPSGGPARAVPHTAGAHRRPPSASLPAIS 340 P P G P + G H +P A P S Sbjct: 87 PGPPGFPGKPGTGKPGVHGQPGPAGPPGFS 116
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 31.6 bits (70), Expect = 0.85 Identities = 20/61 (32%), Positives = 23/61 (37%) Frame = +1 Query: 37 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCL 216 PG A +P G A A DR + G+PG P GP P G E G Sbjct: 604 PGPAGKNGDVGLPGP--PGPAGPAGDRGEPGPSGSPGLQGLPGGPGPAGENGKPGEPGPK 661 Query: 217 G 219 G Sbjct: 662 G 662
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 31.6 bits (70), Expect = 0.85 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -3 Query: 169 GRTGLSPSQAPLSRGLGPGPSLRTRLQTTI--RTAQPPDSQAGLFPVRSP 26 G +GL PS A + PGP+L T Q RT P + + P ++P Sbjct: 1044 GHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGNPSNPGPPKTP 1093
>CSKI2_HUMAN (Q8WXE0) Caskin-2| Length = 1202 Score = 31.6 bits (70), Expect = 0.85 Identities = 37/139 (26%), Positives = 51/139 (36%), Gaps = 3/139 (2%) Frame = -2 Query: 431 TPSRAADQQEPFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSL 252 TP+R + + F +R R GP P P P R G SP Sbjct: 848 TPARGTPRSQSFALRARR-KGPPPPP------------------PKRLSSVSGPSPE--- 885 Query: 251 GRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPF-QGTWARSVAEDASPDYN-- 81 PP L P + T PR T S P G PG P G + + E+ P+ Sbjct: 886 ----PPPLDGSPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPP 941 Query: 80 SDGTAARFSSWAVPGSLAV 24 S G++ +A G+L + Sbjct: 942 SRGSSGEGLPFAEEGNLTI 960
>COLQ_TORMA (Q03637) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) Length = 471 Score = 31.6 bits (70), Expect = 0.85 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = +1 Query: 133 KGAPGRVRAPSG-------PDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 273 KG PG VR P G P P+ PRG + G G+ P + G + P+ TG++ Sbjct: 150 KGRPG-VRGPRGMPGSPCSPGPIGPRGEKGDIGLTGL-PGARGPMGPKGLTGQK 201
>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor| Length = 689 Score = 31.2 bits (69), Expect = 1.1 Identities = 19/72 (26%), Positives = 29/72 (40%) Frame = +1 Query: 28 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 207 A +PG+ + A VP + G D+ + +G PG P PRG + Sbjct: 324 AGQPGSPGHQGLAGVPGQ--PGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQ 381 Query: 208 GCLGMQPKSGGR 243 G +G + G R Sbjct: 382 GIMGQKGDQGER 393 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 246 GAPG P P PV G + CLG + RL Sbjct: 644 GAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARL 680
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = -3 Query: 169 GRTGLSPSQAPLSRGLGPGPSLRTRLQTTI--RTAQPPDSQAGLFPVRSP 26 G +GL PS A + PGP+L T Q RT P + P ++P Sbjct: 996 GHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGDPSNPGPPKTP 1045
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 31.2 bits (69), Expect = 1.1 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Frame = +1 Query: 28 ASEPGTAQLENRAAV-----PSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRG 192 A PG + + A+ P++ +GD+ A+ G PG P P P PRG Sbjct: 261 AGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRG 320 Query: 193 AVNESGCLGMQPKSGGR 243 G G Q +G R Sbjct: 321 PPGPPGTPGSQGLAGER 337
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 31.2 bits (69), Expect = 1.1 Identities = 34/125 (27%), Positives = 48/125 (38%) Frame = +3 Query: 15 SPSNGERTGNSPA*ESGGCAVRIVVWRRVLSDGPGPSPLERGAWEGESPVRPGPCRPTRR 194 +P + R PA + GG A R+ S GP P+P G + RPG Sbjct: 153 TPGSMPRPQAKPAPKPGGRAPRVA--NNPFSSGPRPAPRPGGGNRSGNAPRPG------G 204 Query: 195 GQRVGLFGNAAQIGR*TPSKAKYRRETDSEQVPRGKDEKDFEKRVKECLKLPGGKRMGAG 374 G R G GN Q G+ P++ R P G+ + + + G +R G G Sbjct: 205 GPRPG--GNRPQGGQGGPAERAPR--------PGGRGGQPRPQGGSRSQQSGGQERQGGG 254 Query: 375 DAPRP 389 P P Sbjct: 255 RRPSP 259
>CYLC2_HUMAN (Q14093) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)| Length = 348 Score = 31.2 bits (69), Expect = 1.1 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = +3 Query: 165 RPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSE-QVPRGKDE----KDFEKRV 329 R P +PTR V + AA+IG+ K + TDSE ++ +GK + KD EK Sbjct: 95 RRQPLKPTRT---VEVDSKAAEIGKKGEDKTTQKDTTDSESELKQGKKDSKKGKDIEKGK 151 Query: 330 KECLKLPGGKRMGAGDAPR 386 +E L + G DA + Sbjct: 152 EEKLDAKKDSKKGKKDAEK 170
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -2 Query: 275 GLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAP 135 G+SP G PP L P +P + P GATG P G + PG P Sbjct: 151 GISPPGLFGERGPPGL---PGRPGPV-GPMGATGRAPKGDIPDPGPP 193
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 G + DR + G PG AP P PV P G + G G +G Sbjct: 1028 GSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAG 1076 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/70 (30%), Positives = 26/70 (37%) Frame = +1 Query: 28 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 207 A PG A VP +L + S A +G PG P P PRGA Sbjct: 649 AGPPGEAGKPGEQGVPGDLGAPGPSGARGE-----RGFPGERGVQGPPGPAGPRGANGAP 703 Query: 208 GCLGMQPKSG 237 G G + +G Sbjct: 704 GNDGAKGDAG 713
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Frame = -3 Query: 217 PNNPTR*PR-LVGRQGPGRTGLSPSQAPLSRGLGPGPSLRTRLQTTIR------TAQPPD 59 P PT+ P GPG G P+ +P G GPGP+L + +R +PP Sbjct: 39 PPQPTQPPPGPAAASGPGAAG--PASSPPPAGPGPGPALPAVRLSLVRLGDPDGAGEPPS 96 Query: 58 SQAGL 44 + +GL Sbjct: 97 TPSGL 101
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRV----RAPSGPD--PVAPRGAVNESGCLGMQPKSGGRLRP 252 G++S+ + QVP V RAPS PD P PR S L +PK + +P Sbjct: 2327 GESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKP 2386 Query: 253 R 255 R Sbjct: 2387 R 2387
>C1QB_MOUSE (P14106) Complement C1q subcomponent subunit B precursor| Length = 253 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = +1 Query: 34 EPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGC 213 +PGT ++ +P +GD ++ G PG+V P GP V P+G SG Sbjct: 50 QPGTPGIKGEKGLPGL--AGDLGEFGEKGDPGIPGTPGKV-GPKGP--VGPKGTPGPSGP 104 Query: 214 LGMQPKSG 237 G + SG Sbjct: 105 RGPKGDSG 112
>CNO_HUMAN (Q9NUP1) Cappuccino protein homolog| Length = 217 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Frame = -2 Query: 233 DLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSD---GTAA 63 D G +P+ P+GA SG G ++ + G W AED +P + AA Sbjct: 7 DGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAA 66 Query: 62 RFSSWAVPGS 33 +++ +PG+ Sbjct: 67 GYAACLLPGA 76
>ELN_BOVIN (P04985) Elastin precursor (Tropoelastin)| Length = 747 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -2 Query: 302 FPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGAL--TLPGAP 135 F +R IG P F LG P +G P + A G+G GAL +PGAP Sbjct: 408 FGARGAVGIGGIPTFGLGPGGFPGIGDAAAAPAAAAAKAAKIGAGGVGALGGVVPGAP 465
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 1.5 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 G A DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 30.4 bits (67), Expect = 1.9 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 3/90 (3%) Frame = +1 Query: 16 PLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA 195 P+ PG P E +G+ +A G+PG P P P P GA Sbjct: 473 PIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGA 532 Query: 196 ---VNESGCLGMQPKSGGRLRPRLNTGERP 276 +E+G G+ +GG L G +P Sbjct: 533 PGAFDETGIAGLHLPNGGVEGAVLGKGGKP 562
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 30.4 bits (67), Expect = 1.9 Identities = 27/88 (30%), Positives = 32/88 (36%), Gaps = 3/88 (3%) Frame = +1 Query: 37 PGTAQLENRAAVPSEL*SGDASSATDRAQVPW---KGAPGRVRAPSGPDPVAPRGAVNES 207 PG E AV + G+ S + V G PG P P P P G + Sbjct: 201 PGAPGDEGLPAVCEPVQKGEPGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKP 260 Query: 208 GCLGMQPKSGGRLRPRLNTGERPIANKY 291 G G P G + P GER I KY Sbjct: 261 GADG-NPGQPGPVGPPGTPGERGICPKY 287
>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2124 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = +1 Query: 94 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 273 ++ SA+ ++PW P R PSG + + + + +G L P SGG + +G Sbjct: 864 ESGSASGDGEIPWSSTPTVDRLPSGGESLEGSASASGTGDLSGLP-SGGEITETSASGTE 922 Query: 274 PIA 282 I+ Sbjct: 923 EIS 925
>HUWE1_MOUSE (Q7TMY8) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (E3Histone) Length = 4377 Score = 30.4 bits (67), Expect = 1.9 Identities = 20/63 (31%), Positives = 30/63 (47%) Frame = -2 Query: 197 TAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGTAARFSSWAVPGSLAVTR 18 TA G P + G P + ED+SP +S+ ++ R S+ A+ G A +R Sbjct: 2884 TAGSSTPGDAPSVVAEVQGRPDVSRESNQPPEDSSPPASSESSSTRDSAVAISG--ADSR 2941 Query: 17 GIL 9 GIL Sbjct: 2942 GIL 2944
>ARX_BRARE (O42115) Aristaless-related homeobox protein (ARX)| Length = 453 Score = 30.4 bits (67), Expect = 1.9 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 Query: 195 RASWGDRVRAGRGSHPPRRPFPGDL 121 RA W R +AG +HP PFPG L Sbjct: 267 RAKWRKREKAGVQAHPTGLPFPGPL 291
>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Epidermal growth factor-like 2) (Multiple epidermal growth factor-like domains 3) (Flamingo 1) Length = 2923 Score = 30.0 bits (66), Expect = 2.5 Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 7/79 (8%) Frame = +2 Query: 41 EQPSLRIGRLCRPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTSRVVWE 220 E P L+ RL +C L P R G +SP + LGG R T + S V E Sbjct: 134 EHPCLKAPRLRCQSCKLAQAPGLRAGERSPEES-LGGRRKRNVNTAPQFQPPSYQATVPE 192 Query: 221 CSPN-------RAVDSVQG 256 P RA+D +G Sbjct: 193 NQPAGTPVASLRAIDPDEG 211
>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 30.0 bits (66), Expect = 2.5 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -2 Query: 251 GRSLPPDLGCIPK--QPDSLTAPRGATGSGPDGALTLPGAPFQG 126 GR LPP LG PK Q +L A G+ D L G PF G Sbjct: 637 GRLLPPGLGLEPKSAQDKALLQMVEAAGAAEDDPLRRTGRPFGG 680
>RL15_STAEQ (Q5HM18) 50S ribosomal protein L15| Length = 146 Score = 30.0 bits (66), Expect = 2.5 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +1 Query: 133 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 279 K A G RVR G G + G G + +SGG+LRP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKLRPGFEGGQLPL 57
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 30.0 bits (66), Expect = 2.5 Identities = 18/69 (26%), Positives = 27/69 (39%) Frame = +1 Query: 37 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCL 216 PG+ + A VP + G D+ + +G PG P PRG + G + Sbjct: 326 PGSPGHQGLAGVPGQ--PGTKGGPGDKGEPGQQGLPGVSGPPGKEGEPGPRGEIGPQGIM 383 Query: 217 GMQPKSGGR 243 G + G R Sbjct: 384 GQKGDQGER 392 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 246 GAPG P P PV G + CLG + RL Sbjct: 643 GAPGEAGRPGRPGPVGLPGFCEPAACLGASAYTSARL 679
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +1 Query: 100 SSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 252 + A R W+G + PSGP +A RG V G S G + P Sbjct: 868 AGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVP 918
>SCND1_HUMAN (P57086) SCAN domain-containing protein 1| Length = 179 Score = 30.0 bits (66), Expect = 2.5 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +1 Query: 22 VTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVN 201 + A+EP A + AAVP E G SS+ P +P P+P +P AV Sbjct: 1 MAATEPILAATGSPAAVPPEKLEGAGSSSAPERNCVGSSLP--EASPPAPEPSSPNAAVP 58 Query: 202 ES 207 E+ Sbjct: 59 EA 60
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/65 (23%), Positives = 30/65 (46%) Frame = +1 Query: 88 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTG 267 S D+ +T++ + +P + +PS +NE C+ P S L+P + Sbjct: 803 SNDSKESTEKPEKEKSKSPEKELSPSNSSSSNKESKMNEKSCI-KSPSSTESLQPTVKQS 861 Query: 268 ERPIA 282 ++P+A Sbjct: 862 DQPVA 866
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 252 G PG + P P PRGA G G P + GR+ P Sbjct: 837 GPPGPIGNVGAPGPKGPRGAAGPPGATGF-PGAAGRVGP 874 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +1 Query: 130 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 273 ++G PG P G P+ PRG G G ++G RP GER Sbjct: 190 FQGPPGEPGEPGGSGPMGPRGPPGPPGKNGDDGEAGKPGRP----GER 233
>MYO10_BOVIN (P79114) Myosin-10 (Myosin X)| Length = 2052 Score = 29.6 bits (65), Expect = 3.2 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 11/69 (15%) Frame = -2 Query: 224 CIPKQPDSLTAPRG----ATGSGPDGALTLPGAPFQGTWARSVAEDASPD-------YNS 78 C+P+ P +L AP G DGA+T + T++ S + SPD YNS Sbjct: 1068 CLPQTPGALPAPEGDYDYDQDDYEDGAITSGSSV---TFSNSCSSQWSPDYRCSVGTYNS 1124 Query: 77 DGTAARFSS 51 G A RFSS Sbjct: 1125 SG-AYRFSS 1132
>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)| Length = 687 Score = 29.6 bits (65), Expect = 3.2 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 429 PEPSGGPARAVPHTAGAHRRPPSASLP 349 P+PS G A H++ H +PPS S P Sbjct: 423 PQPSNGSREAGAHSSSNHAQPPSHSRP 449
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 G DR + G PG AP P PV P G + G G +G Sbjct: 1024 GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1072 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/70 (30%), Positives = 26/70 (37%) Frame = +1 Query: 28 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 207 A PG A VP +L + S A +G PG P P PRGA Sbjct: 645 AGPPGEAGKPGEQGVPGDLGAPGPSGARGE-----RGFPGERGVQGPPGPAGPRGANGAP 699 Query: 208 GCLGMQPKSG 237 G G + +G Sbjct: 700 GNDGAKGDAG 709 Score = 28.5 bits (62), Expect = 7.2 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = +1 Query: 136 GAPG--RVRAPSGPD----PVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYRE 297 GAPG R PSGP P P+G E G G + +G + P + P E Sbjct: 403 GAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEE 462 Query: 298 GK 303 GK Sbjct: 463 GK 464
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 29.6 bits (65), Expect = 3.2 Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 13/145 (8%) Frame = +1 Query: 28 ASEPGTAQLENRA---AVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPR--- 189 A PG A E A A S+ +A+ A + + + A R R P GP P R Sbjct: 784 AEGPGAADAEESAPAAAAKSQGGPAEAAVAPEEREEAPRPAEKRSRRPRGPGPGPGRRGG 843 Query: 190 -------GAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYREGKMKRTLKRESKSA*NC 348 A + G + G R +PR R ++ G +R L R ++ C Sbjct: 844 GGPAPGAPAAPAAAARGPSRRPGARAKPRRRRRRR---RRHARGGGRRYLSRPARGG-PC 899 Query: 349 REGSGWGPAMRPGRMRNGSCWSAAR 423 R G A R + + S +AAR Sbjct: 900 RARDG---AHRSSALPSTSAPAAAR 921
>YO61_CAEEL (P34600) Hypothetical protein ZK1098.1 in chromosome III| Length = 724 Score = 29.6 bits (65), Expect = 3.2 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -2 Query: 143 GAPFQGTWARSVAEDASPDYNSDGTAARFSSWAVPGSLAVTRG 15 G P QG W +++D P Y + T + + W P +T+G Sbjct: 122 GQPQQGQWKEFMSDDGKPYYYN--TLTKKTQWVKPDGEEITKG 162
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 G+ R Q G PG V AP P P P+G E G G+ K G Sbjct: 624 GETGFPGPRGQEGLPGKPGIVGAPGLPGPPGPKG---EPGLTGLPEKPG 669 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = +1 Query: 133 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGE 270 KG G AP P PV P+G+ G G++ + G G+ PR GE Sbjct: 1186 KGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGE 1236
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/46 (39%), Positives = 18/46 (39%) Frame = +3 Query: 111 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 248 GPGP P RG P P P RG R G G GR P Sbjct: 697 GPGPGPYHRGRGGRGGNEPPPPPPPPFRGARGGRSGGGPPNGRGGP 742
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 252 G PG PSGP P P G +G G GG P Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 29.6 bits (65), Expect = 3.2 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRLRPRLNTGER 273 G+PG AP P P P G G G Q G G P + GE+ Sbjct: 632 GSPGEDGAPGEPGPQGPEGQPGLDGASGQQGMKGEKGARGPNGSAGEK 679
>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9| Length = 736 Score = 29.6 bits (65), Expect = 3.2 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%) Frame = +1 Query: 37 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCL 216 PG + + + +P L + + R GAP R R + VAPR A + Sbjct: 558 PGAESVIHPSMMPQPLNASRTDLSISRNSPGPGGAPARSRTSEYYEDVAPRFATPDPSLR 617 Query: 217 G--MQPKSGGRLRPRLN 261 G + ++GGR+ P +N Sbjct: 618 GTPVPGQAGGRIPPPIN 634
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 29.6 bits (65), Expect = 3.2 Identities = 21/51 (41%), Positives = 22/51 (43%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 243 GDA D Q KG PGR G PRGA E G G + GGR Sbjct: 493 GDAGPRGDSGQPGPKGDPGR----PGFSYPGPRGAPGEKGEPGPRGPEGGR 539
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065
>SASH1_HUMAN (O94885) SAM and SH3 domain-containing protein 1 (Proline-glutamate| repeat-containing protein) Length = 1247 Score = 29.3 bits (64), Expect = 4.2 Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 9/77 (11%) Frame = -2 Query: 221 IPKQPDSLTAPRG----ATG-----SGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGT 69 IP QP + A + A G GP GAL P AP S A SP Sbjct: 980 IPSQPPPVPAKKSRERLANGLHPVPMGPSGALPSPDAPCLPVKRGSPASPTSPSDCPPAL 1039 Query: 68 AARFSSWAVPGSLAVTR 18 A R S PGS TR Sbjct: 1040 APRPLSGQAPGSPPSTR 1056
>OTO1_ONCKE (P83371) Otolin-1 precursor| Length = 508 Score = 29.3 bits (64), Expect = 4.2 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLN 261 GD D+ GAPG + + P+G E+G G++ G R +P N Sbjct: 189 GDKGDKGDQGDTGMPGAPGILGKEGPKGDLGPKGEKGETGLPGLKGDLGERGKPGWN 245
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 133 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 258 KG PG V P P P G E G G+ G + P L Sbjct: 619 KGEPGNVGPAGAPGPAGPGGIPGERGVAGVPGGKGEKGAPGL 660 Score = 29.3 bits (64), Expect = 4.2 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAP---RGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYREGK 303 G PG P P P P RG V E G G + +SG + P P EGK Sbjct: 320 GLPGPRGIPGPPGPAGPSGARGLVGEPGPAGAKGESGNKGEPGAAGPPGPPGPSGEEGK 378 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/55 (32%), Positives = 20/55 (36%) Frame = +1 Query: 88 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 252 SG + QV G PG P PV P GA G G Q G + P Sbjct: 955 SGALGAPGPHGQVGPSGKPGNRGDPGPVGPVGPAGAFGPRGLAGPQGPRGEKGEP 1009
>CXA1_HUMAN (P17302) Gap junction alpha-1 protein (Connexin-43) (Cx43) (Gap| junction 43 kDa heart protein) Length = 381 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -2 Query: 335 LFDSLFKVLFIFPSRYLFAIGLSPVFSLGRS-LPPDLGCIPKQPDSLT 195 LF S+F+V F+ Y++ LS V++ R P + C +P T Sbjct: 159 LFKSIFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLSRPTEKT 206
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 29.3 bits (64), Expect = 4.2 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 291 GAPG AP P PRG G G G +P GER + KY Sbjct: 145 GAPGHPGAPGAPGEKGPRGQDGHPGAPGNAGHPGQPGQPG-PPGERGVCPKY 195
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 29.3 bits (64), Expect = 4.2 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 94 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQP-KSGGRLRPRLNTG 267 ++ SA+ +VPW P R PSG + +P G+ + SG + SGG + +G Sbjct: 868 ESGSASGDGEVPWSHTPTVGRLPSGGE--SPEGSASASGTGDLSGLPSGGEITETSTSG 924
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 4.2 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +1 Query: 130 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGG 240 W+ P R P D V PRG + GC G GG Sbjct: 1624 WRRGPRPRRRPGLTDRVPPRGGPSPRGCRGAGRAGGG 1660
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +1 Query: 133 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 258 KG PG P P P G + G +GM + G R P L Sbjct: 965 KGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGL 1006
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 29.3 bits (64), Expect = 4.2 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRLRPRLNTGERPIANKY 291 GAPG AP P P P G +G LG + ++G G P+ G P + Sbjct: 238 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPG--PAGVQG 295 Query: 292 REGKMKRTLKRESKSA*NCREGSGWGPAMRPG 387 G KR ++ E G GPA PG Sbjct: 296 APGPAGEEGKRGARG-----EPGGAGPAGPPG 322
>IE63_SHV21 (P13199) 52 kDa immediate-early phosphoprotein| Length = 417 Score = 29.3 bits (64), Expect = 4.2 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = -1 Query: 243 STARFG----LHSQTTRLVDRASWGDRVRAGRGSHPPRRPF 133 S RFG + S +T + SW DRVR P RPF Sbjct: 85 SPMRFGKRPRISSNSTSRSCKTSWADRVREAAAQRRPSRPF 125
>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)| Length = 706 Score = 28.9 bits (63), Expect = 5.5 Identities = 33/134 (24%), Positives = 45/134 (33%), Gaps = 18/134 (13%) Frame = +1 Query: 37 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWK---------GAPGRVRAPSGPDP---V 180 P + L R P+ + AS AT Q + GAP R P+ P P Sbjct: 499 PAGSPLPQRLPSPTSVPQQPASQATPMTQGQGRQSRPVAGGPGAPPATRPPASPSPQRQA 558 Query: 181 APRGAVNESGCLGMQPKSGGRLRP----RLNTGERP--IANKYREGKMKRTLKRESKSA* 342 P A ++ G P + P R ++P A R+ + R Sbjct: 559 GPPQATRQTSVSGQAPPKASGVPPGGQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPPTT 618 Query: 343 NCREGSGWGPAMRP 384 SG GPA RP Sbjct: 619 QQPRPSGPGPAGRP 632
>RL15_STAES (Q8CRH9) 50S ribosomal protein L15| Length = 146 Score = 28.9 bits (63), Expect = 5.5 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +1 Query: 133 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 279 K A G RVR G G + G G + +SGG++RP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKVRPGFEGGQLPL 57
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/53 (28%), Positives = 21/53 (39%) Frame = +1 Query: 37 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA 195 PG +A P+ +G R +P + P P+G P AP GA Sbjct: 63 PGQPADNAQAGAPAPAPNGQQRPPRRRRMIPTRAPPPAGAPPNGAPPAAPNGA 115
>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (Protein foggy) Length = 1084 Score = 28.9 bits (63), Expect = 5.5 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = -1 Query: 249 TESTARFGLHSQ-TTRLVDR---ASWGDRVRAGRGSHPPRRPFPGDLGPV 112 TESTAR LHS T VDR + G + R GR S R P G P+ Sbjct: 726 TESTARVELHSTCQTISVDRQRLTTVGGKERQGRSSTHLRTPMYGSQTPI 775
>PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 588 Score = 28.9 bits (63), Expect = 5.5 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 6/64 (9%) Frame = -3 Query: 196 PRLVGRQGPGRTGLSPSQAPLSRGLG------PGPSLRTRLQTTIRTAQPPDSQAGLFPV 35 P V R+ GR SP A LSRGLG P ++ + T R + P+ + L Sbjct: 180 PPEVNRREEGRISESPEVARLSRGLGRHETHTPNSTVDLQTDTWSRRTRSPELFSPLSRP 239 Query: 34 RSPL 23 SPL Sbjct: 240 PSPL 243
>CNTP4_HUMAN (Q9C0A0) Contactin-associated protein-like 4 precursor (Cell| recognition molecule Caspr4) Length = 1308 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 Query: 160 PSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNT 264 PS PDPV G V ES C+ QP + R R ++ Sbjct: 1185 PSHPDPVTVTGHVTESSCMA-QPGTDATSRERTHS 1218
>VL2_BPV1 (P03109) Minor capsid protein L2| Length = 469 Score = 28.9 bits (63), Expect = 5.5 Identities = 30/76 (39%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -2 Query: 239 PPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARS-VAEDASPDYNSDGTAA 63 PPD+ IPK A + G A+ L G GTW+ VA SP Y TA Sbjct: 26 PPDV--IPKVEGDTIADKILKFGGL--AIYLGGLGI-GTWSTGRVAAGGSPRYTPLRTAG 80 Query: 62 RFSSWAVPGSLAVTRG 15 SS A GS AVT G Sbjct: 81 STSSLASIGSRAVTAG 96
>POL_SIVG1 (Q02836) Pol polyprotein [Contains: Protease (Retropepsin) (EC| 3.4.23.-); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 1057 Score = 28.9 bits (63), Expect = 5.5 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +3 Query: 15 SPSNGERTGNSPA*E-SGGCAVRIVVWRR-----VLSDGPGPSPLERGA 143 +P GERT E SGGC + + +WRR ++ P + L+ GA Sbjct: 69 APERGERTDKETEGERSGGCFLELPLWRRPMKRVIIEGTPVQALLDTGA 117
>HSV2_EMENI (Q5B464) SVP1-like protein 2| Length = 317 Score = 28.9 bits (63), Expect = 5.5 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Frame = -2 Query: 305 IFPSRYLFAIGLSPVFSLGRSLP-----PDLGCIPKQPDSLTAPRGATGSGPDGALTLPG 141 +F Y FA S F LG P P LG + +P P+G G D + + G Sbjct: 231 VFSDVYSFA---SAHFELGEEEPGPTYAPPLGTVLGRP-----PKGVIGWSNDNTILVVG 282 Query: 140 APFQGTWARSVAED 99 + G W + V D Sbjct: 283 SGSDGRWEKFVLRD 296
>VP40_EHV1V (P84454) Capsid protein P40 (Virion structural gene 35 protein)| [Contains: Capsid protein VP24 (EC 3.4.21.97) (Assemblin) (Protease); Capsid protein VP22A; Gene 35.5 protein; C-terminal peptide] Length = 646 Score = 28.9 bits (63), Expect = 5.5 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = -2 Query: 347 QFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQP-DSLTAPRGATGS 171 Q QA L+K + P +Y + P ++ + P L IP QP ++ AP+ G Sbjct: 513 QPQAAPAGLYKPIPAVPPQYSQYQYIQPQHAVSAIVAPQLPGIPSQPTQAVLAPQVPAGE 572 Query: 170 GPDGALTLPG--APFQGTWARSVAE 102 P A + AP Q AR+ + Sbjct: 573 APGSAKVVAASTAPQQAEQARAAPQ 597
>VP40_EHV1B (P28936) Capsid protein P40 (Virion structural gene 35 protein)| [Contains: Capsid protein VP24 (EC 3.4.21.97) (Assemblin) (Protease); Capsid protein VP22A; Gene 35.5 protein; C-terminal peptide] Length = 646 Score = 28.9 bits (63), Expect = 5.5 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = -2 Query: 347 QFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQP-DSLTAPRGATGS 171 Q QA L+K + P +Y + P ++ + P L IP QP ++ AP+ G Sbjct: 513 QPQAAPAGLYKPIPAVPPQYSQYQYIQPQHAVSAIVAPQLPGIPSQPTQAVLAPQVPAGE 572 Query: 170 GPDGALTLPG--APFQGTWARSVAE 102 P A + AP Q AR+ + Sbjct: 573 APGSAKVVAASTAPQQAEQARAAPQ 597
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 243 G+PG AP P P P G G G Q +G R Sbjct: 138 GSPGPAGAPGAPGPQGPNGQPGHPGQGGSQGPAGPR 173
>GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| Length = 678 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/69 (30%), Positives = 31/69 (44%) Frame = +2 Query: 71 CRPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTSRVVWECSPNRAVDSV 250 CR + S PQ+RTG SP +G PRP + E RS+ V S + Sbjct: 274 CRCSSSTHRLPQQRTGTFSPQRGSPTP-SPRPGSPVPGSERRSSRPEVTPISLRGTKEGP 332 Query: 251 QG*IQARDR 277 + ++ RD+ Sbjct: 333 ETPLRPRDQ 341
>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor| Length = 680 Score = 24.3 bits (51), Expect(2) = 6.9 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = -1 Query: 432 HPEPSGGPARAVPHTAGAHRRPPSASLPAISST 334 HP PSG P + + G P P IS+T Sbjct: 73 HPGPSGPPGKPGYGSPGLQGEPGLPGPPGISAT 105 Score = 22.7 bits (47), Expect(2) = 6.9 Identities = 15/61 (24%), Positives = 20/61 (32%) Frame = -2 Query: 218 PKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGTAARFSSWAVP 39 P P + P G + G G L GAP + +P N + S P Sbjct: 140 PPGPPGIPGPAGISVPGKPGQQGLTGAPGPRGFPGEKGAQGAPGVNGRKGETGYGSPGRP 199 Query: 38 G 36 G Sbjct: 200 G 200
>CAS4_EPHMU (P18503) Short-chain collagen C4 (Fragment)| Length = 366 Score = 28.5 bits (62), Expect = 7.2 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +1 Query: 133 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 +GAPG AP P P P+G + G G + G Sbjct: 48 QGAPGAPGAPGLPGPAGPQGPKGDKGLPGNDGQPG 82
>PALH_YARLI (Q9UVF6) pH-response regulator protein palH/RIM21| Length = 632 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 8/37 (21%) Frame = -1 Query: 432 HPEPSGGPARAVPHT--------AGAHRRPPSASLPA 346 HP PS G RAV HT GAH P+A+ A Sbjct: 517 HPVPSSGGTRAVGHTHFPLPGQSEGAHTTSPAAAAAA 553
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 28.5 bits (62), Expect = 7.2 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 7/79 (8%) Frame = +2 Query: 41 EQPSLRIGRLCRPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTSRVVWE 220 E P L+ RL +C L P R G SP + LGG R T + S V E Sbjct: 134 EHPCLKAPRLRCQSCKLAQAPGLRAGEGSPEES-LGGRRKRNVNTAPQFQPPSYQATVPE 192 Query: 221 CSPN-------RAVDSVQG 256 P RA+D +G Sbjct: 193 NQPAGTSVASLRAIDPDEG 211
>C1QB_RAT (P31721) Complement C1q subcomponent subunit B precursor| Length = 253 Score = 28.5 bits (62), Expect = 7.2 Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 8/96 (8%) Frame = +1 Query: 13 IPLVTASE--PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRV--RAPSGPD-- 174 IP V S+ PGT ++ +P +GD ++ G PG+V + P GP Sbjct: 41 IPGVPGSDGKPGTPGIKGEKGLPGL--AGDHGELGEKGDAGIPGIPGKVGPKGPVGPKGA 98 Query: 175 --PVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERP 276 P PRG SG K +N+ RP Sbjct: 99 PGPPGPRGPKGGSGDYKATQKVAFSALRTVNSALRP 134
>EFNB3_MOUSE (O35393) Ephrin-B3 precursor| Length = 340 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = -2 Query: 275 GLSPVFSLGRSLPPDLGCIPKQPDS---LTAPRGATGSGPDGALTLPGAPFQGTWARSVA 105 G+ + +G+S P G +P++P S + RGA S G T+PG P +R Sbjct: 160 GMKVLLRVGQS--PRGGAVPRKPVSEMPMERDRGAAHSAEPGRDTIPGDPSSNATSRGAE 217 Query: 104 EDASP 90 P Sbjct: 218 GPLPP 222
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +3 Query: 111 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIG 236 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG 1057 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +1 Query: 133 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 KG PG V AP PV P G + G G++ G Sbjct: 1338 KGDPGAVGAPGKTGPVGPAGLAGKPGPDGLRGLPG 1372 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 G G+ P P V P+G ESG +G + SG Sbjct: 913 GFQGKTGPPGPPGVVGPQGTAGESGPMGERGHSG 946
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +3 Query: 111 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIG 236 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG 1057
>SRBP1_RAT (P56720) Sterol regulatory element-binding protein 1 (SREBP-1)| (Sterol regulatory element-binding transcription factor 1) (Adipocyte determination- and differentiation-dependent factor 1) (ADD1) (Fragment) Length = 1024 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -3 Query: 172 PGRTGLSPSQAPL--SRGLGPGPSLRTRLQTTIRTAQPPDSQA 50 PG T +PS PL + G+ P P L T++Q++ PP S A Sbjct: 151 PGNTQQTPSSLPLGSTPGISPTP-LHTQVQSSAAQQPPPASAA 192
>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)| Length = 1500 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/62 (27%), Positives = 22/62 (35%) Frame = +3 Query: 108 DGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSEQ 287 D P PS E +E E P+ P P P+ + Q P + Y E E Sbjct: 798 DQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPPVKTPDQPEPSKPEEPNYETEKPLEP 857 Query: 288 VP 293 P Sbjct: 858 AP 859
>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 512 Score = 28.5 bits (62), Expect = 7.2 Identities = 30/103 (29%), Positives = 37/103 (35%) Frame = +3 Query: 87 VWRRVLSDGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYR 266 VW R+ + P SP + G P +P R G+R G GR P A Sbjct: 104 VWSRLGARRPSCSPEQHGGKVARLQPPPTKAQPARGGRR----GRRRGRGRGGPGAA--- 156 Query: 267 RETDSEQVPRGKDEKDFEKRVKECLKLPGGKRMGAGDAPRPYA 395 D PR +R + PGG R GAG P A Sbjct: 157 ---DGLSDPR--------RRAPRTNRNPGGPRPGAGWTDGPGA 188
>CKR1_CHICK (P30373) Zinc finger protein CKR1| Length = 509 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/60 (28%), Positives = 24/60 (40%) Frame = -1 Query: 189 SWGDRVRAGRGSHPPRRPFPGDLGPVRR*GRVSRLQFGRHSRPILKLGCSRFARRY*GNP 10 +W ++ R H RPFP L R + LQ G+ RP C +R+ P Sbjct: 313 AWASHLQRHRRVHTGERPFPCGLCGERFSQKAHLLQHGKTHRPERPYKCGDCGKRFENAP 372
>PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)| Length = 2135 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = -2 Query: 209 PDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGTAARFSSWAVPGSL 30 P TAP+ PD PGAP T A ++ ASP S + WA GS+ Sbjct: 692 PSPPTAPKALATPAPDTLPVEPGAPSTAT-ASDISPGASPSLLSP-----WGPWAGSGSI 745 Query: 29 A 27 + Sbjct: 746 S 746
>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor| Length = 616 Score = 28.5 bits (62), Expect = 7.2 Identities = 30/100 (30%), Positives = 38/100 (38%) Frame = -1 Query: 429 PEPSGGPARAVPHTAGAHRRPPSASLPAISSTL*LSFQSPFHLSLAVLVRYRSLACI*PW 250 PEP+ P P G PS L A++S L F S A + + A Sbjct: 132 PEPAAPPRPQTPEN-GPEASDPSEELEALASLL--QELRDFSPSSAKRQQETAAAETETR 188 Query: 249 TESTARFGLHSQTTRLVDRASWGDRVRAGRGSHPPRRPFP 130 T + R L S V RASWG+ + P R P P Sbjct: 189 THTLTRVNLESPGPERVWRASWGE----FQARVPERAPLP 224
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +1 Query: 37 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESG 210 PG A A P E G+ +R + G PG P P P P+ +V+E G Sbjct: 2045 PGRAGGVGEAGRPGE--RGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPG 2100 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/50 (38%), Positives = 21/50 (42%) Frame = +1 Query: 88 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 237 +G A D KG PGR P P PV PRG E G G + G Sbjct: 1600 TGRAGPPGDSGPPGEKGDPGR---PGPPGPVGPRGRDGEVGEKGDEGPPG 1646 Score = 24.6 bits (52), Expect(2) = 10.0 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +2 Query: 350 GREADGGRRCAPAVCGTALAGP 415 G + + GR PAV G A+AGP Sbjct: 1531 GEKGEPGRPGDPAVVGPAVAGP 1552 Score = 21.6 bits (44), Expect(2) = 10.0 Identities = 12/39 (30%), Positives = 16/39 (41%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 252 G+PG P + P+G G LG + G R P Sbjct: 1462 GSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500
>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) (Tamalin) (95 kDa postsynaptic density protein discs-large ZO-1 domain-containing protein) (PSD-95 PDZ domain-containing protein) Length = 394 Score = 28.1 bits (61), Expect = 9.4 Identities = 20/49 (40%), Positives = 22/49 (44%) Frame = -2 Query: 236 PDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 90 PDL + PDS A T SGP A PGAP G + ED P Sbjct: 19 PDLA--GRAPDSEAARAAPTPSGPPAAAAPPGAP--GDELYAALEDYHP 63
>TRPV4_HUMAN (Q9HBA0) Transient receptor potential cation channel subfamily V| member 4 (TrpV4) (osm-9-like TRP channel 4) (OTRPC4) (Vanilloid receptor-like channel 2) (Vanilloid receptor-like protein 2) (VRL-2) (Vanilloid receptor-related osmotically-acti Length = 871 Score = 28.1 bits (61), Expect = 9.4 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 157 LSPSQAPLSRGLGPG---PSLRTRLQTTIRTAQP 65 LSPS A SR GPG P+LR + Q R P Sbjct: 47 LSPSPADASRPAGPGDGRPNLRMKFQGAFRKGVP 80
>C1QB_HUMAN (P02746) Complement C1q subcomponent subunit B precursor| Length = 251 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +1 Query: 34 EPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGC 213 +PGT ++ +P +GD ++ G PG+V P GP + P+G G Sbjct: 50 QPGTPGIKGEKGLPGL--AGDHGEFGEKGDPGIPGNPGKV-GPKGP--MGPKGGPGAPGA 104 Query: 214 LGMQPKSG 237 G + +SG Sbjct: 105 PGPKGESG 112
>1C02_HUMAN (P30501) HLA class I histocompatibility antigen, Cw-2 alpha chain| precursor (MHC class I antigen Cw*2) Length = 366 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -1 Query: 252 WTESTARFGLHSQTTRLVDRASWGDRVRAGRGSHPPRRPFPGDLGP 115 W T ++ +QT R+ R G ++ GSH +R + DLGP Sbjct: 84 WDRETQKYNRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGCDLGP 129
>Y2127_STRCO (P40182) Hypothetical protein SCO2127| Length = 191 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = -2 Query: 254 LGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAED 99 + LPP P + D++ R ATG GA PGA WA + AED Sbjct: 1 MSEELPPSEAPRPDEADAVDETR-ATGE-TRGAAQEPGASDADAWATACAED 50
>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)| (180 kDa bullous pemphigoid antigen 2) Length = 1497 Score = 28.1 bits (61), Expect = 9.4 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +1 Query: 133 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLR 249 KG G P P P PRG E G G Q +G R R Sbjct: 1452 KGDRGPAGPPGHPGPPGPRGHKGEKGDKGDQVYAGRRRR 1490
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Frame = +1 Query: 133 KGAPGRVRAPSGPDPVAPRGAVNESGCLGM--------QPKSGGRLRPRLNTGE 270 +G PG P PRGA E+G G QP GR+ PR +G+ Sbjct: 951 QGTPGHSGESGPPGAPGPRGARGEAGGRGSQGPPGKDGQPGPSGRVGPRGPSGD 1004
>TACC2_MOUSE (Q9JJG0) Transforming acidic coiled-coil-containing protein 2| Length = 1035 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = -2 Query: 218 PKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGT 69 P++P ++ P GP + ++ G+PF+ + + S D S GT Sbjct: 65 PEEPGCISEPPVVVPDGPRSSESVEGSPFRPSHSSSAVFDEDKPIASSGT 114
>COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccular collagen)| Length = 419 Score = 28.1 bits (61), Expect = 9.4 Identities = 22/73 (30%), Positives = 28/73 (38%) Frame = +1 Query: 88 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTG 267 +GD D+ V G PG P +G E G G++ G R P LN Sbjct: 105 NGDIGEKGDQGPVGLPGVPGIPGKPGEKGDPGLKGDKGERGFSGLKGDPGERGEPGLNGT 164 Query: 268 ERPIANKYREGKM 306 + I REG M Sbjct: 165 KGSIG---REGPM 174
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.1 bits (61), Expect = 9.4 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 12/68 (17%) Frame = +1 Query: 136 GAPGRVRAPSGPDP------------VAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 279 G PG AP P P PRG V E G G + ++G + P + P Sbjct: 319 GLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPP 378 Query: 280 ANKYREGK 303 EGK Sbjct: 379 GPSGEEGK 386
>LPIN1_HUMAN (Q14693) Lipin-1| Length = 890 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +2 Query: 74 RPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTS 205 + + L ++ RTG K+P L G P+ A++ SPH+ + +S Sbjct: 251 KSDSELVSKSTERTGQKNPEMLWLWGELPQAAKSSSPHKMKESS 294
>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) Length = 553 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = -2 Query: 275 GLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTW 120 G++P +LG + P + P S T+ G++G G GA GA GT+ Sbjct: 343 GIAPPLALG-AYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTY 393
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +1 Query: 136 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 291 G PG P P P P G + G G P + G+ GE+ I KY Sbjct: 201 GQPGHDGQPGAPGPKGPNGNPGQPGADG-NPGAPGQSGTPGGVGEKGICPKY 251
>YL57_CAEEL (P34437) Putative zinc finger protein F44E2.7| Length = 471 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Frame = +3 Query: 249 SKAKYRRETDSEQVPRGKDEKDFEKR----VKECLKLPGGKRMGAGDAPRPYAERLLLVR 416 ++A+Y R+ +++ + K KD EKR +++CL+L K A R AE+ + R Sbjct: 148 AEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKTAAAAQI-RETAEKAAVAR 206 Query: 417 R 419 R Sbjct: 207 R 207
>PROF3_LILLO (Q9SNW5) Profilin-3| Length = 131 Score = 28.1 bits (61), Expect = 9.4 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -2 Query: 128 GTWARSVAEDASPDYNSDGTAARFSSWAVPGSLAVT 21 G WA+S D+ P + TAA +A PGSLA T Sbjct: 31 GIWAQS---DSFPQVKPEQTAAIMRDFAEPGSLAPT 63
>CO4A3_BOVIN (Q28084) Collagen alpha-3(IV) chain (Fragment)| Length = 471 Score = 28.1 bits (61), Expect = 9.4 Identities = 20/68 (29%), Positives = 27/68 (39%) Frame = +1 Query: 34 EPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGC 213 EPGT ++ + P G SA + +G PG P P P P+G E G Sbjct: 147 EPGTVKIISLPGSP-----GPPGSAGEPGM---QGEPGPPGPPGDPGPCGPKGKPGEDGP 198 Query: 214 LGMQPKSG 237 G +G Sbjct: 199 PGTPGPTG 206
>CGRE1_HUMAN (Q99674) Cell growth regulator with EF hand domain 1 (Cell growth| regulatory gene 11 protein) Length = 301 Score = 28.1 bits (61), Expect = 9.4 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Frame = +3 Query: 147 EGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSEQVPRGKDEKDFEKR 326 E P+ P P P G++ L +K+ R+ET PR + + E R Sbjct: 151 EPGEPLAPSPQEPQAVGRQSLL------------AKSPLRQETQEAPGPREEAKGQVEAR 198 Query: 327 VKEC--LKLPGGKRMGAGDAPRPYAE 398 + ++ PGG+ GD P P E Sbjct: 199 RESLDPVQEPGGQAEADGDVPGPRGE 224
>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor| Length = 1028 Score = 28.1 bits (61), Expect = 9.4 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGR-----VRAPSG-PDPVAPRGAVNESGCLGMQPKSG 237 G+ A D GAPG R P G P P PRG E+G G Q + G Sbjct: 404 GEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGPRGPRGDPGEAGPQGDQGREG 458
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 28.1 bits (61), Expect = 9.4 Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 2/131 (1%) Frame = +1 Query: 37 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGR--VRAPSGPDPVAPRGAVNESG 210 PG + + ++PSE + ++ + P R V PS PDP R G Sbjct: 222 PGRSAPPAKPSIPSE-------RKAPKPELVGRPKPKRPVVAPPSRPDPEGQRPDKKRPG 274 Query: 211 CLGMQPKSGGRLRPRLNTGERPIANKYREGKMKRTLKRESKSA*NCREGSGWGPAMRPGR 390 + P+ G R NT +RP A R+GK T + +SA N E G +P R Sbjct: 275 ---ISPRPIGGPNQRANTSQRPGA-PIRQGK---TRPGQPRSAGNTLELVG-----KPIR 322 Query: 391 MRNGSCWSAAR 423 SA R Sbjct: 323 RDRSDAGSAGR 333
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/53 (32%), Positives = 21/53 (39%) Frame = +1 Query: 91 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLR 249 GDA +R KG PGR P P +G+ G G Q G + R Sbjct: 358 GDAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGR 410
>GLGB_YEAST (P32775) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) Length = 704 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -2 Query: 365 HPLPSRQFQALFDSLFKVLFIFP 297 HPLP+ F DS KV+FI P Sbjct: 115 HPLPNGDFAIPHDSKIKVMFILP 137
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/56 (37%), Positives = 24/56 (42%) Frame = +1 Query: 133 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYREG 300 KG PG V A P P G E G G+ G + P L GE I N R+G Sbjct: 621 KGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLR-GE--IGNPGRDG 673
>RCOR2_HUMAN (Q8IZ40) REST corepressor 2| Length = 523 Score = 28.1 bits (61), Expect = 9.4 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Frame = -2 Query: 266 PVFSLGRSLPPDLGCIPKQPD------SLTAPRGATGSGPDGALTLPGAPFQ 129 P GR L P L P QP +L APR + GP TL GAP + Sbjct: 468 PPLQQGRFLQPRLA--PNQPPPPLIRPALAAPRHSARPGPQPPPTLIGAPLE 517 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,441,081 Number of Sequences: 219361 Number of extensions: 2004241 Number of successful extensions: 9976 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 7626 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9851 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
