ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet32a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HTPG_NITWN (Q3SNS6) Chaperone protein htpG (Heat shock protein h... 32 0.27
2CBK1_CANGA (Q6FP74) Serine/threonine-protein kinase CBK1 (EC 2.7... 32 0.36
3LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC... 30 1.8
4SCG2_HUMAN (P13521) Secretogranin-2 precursor (Secretogranin II)... 29 2.3
5PRMA_CHLTE (Q8KG70) Ribosomal protein L11 methyltransferase (EC ... 29 2.3
6PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor c... 29 2.3
7RECX_PASMU (Q9CK20) Regulatory protein recX 28 4.0
8CHBG_SERMA (Q8L3B9) UPF0249 protein chbG 28 5.2
9GLGA_HAEI8 (Q4QK70) Glycogen synthase (EC 2.4.1.21) (Starch [bac... 28 6.8
10MVIN_TREPA (O83529) Virulence factor mviN homolog 28 6.8
11RPGRH_CAEEL (Q5DX34) X-linked retinitis pigmentosa GTPase regula... 27 8.8
12DNAJ2_CORDI (Q6NEZ1) Chaperone protein dnaJ 2 27 8.8
13ARLY2_RHILO (Q981V0) Argininosuccinate lyase 2 (EC 4.3.2.1) (Arg... 27 8.8
14CBK1_YEAST (P53894) Serine/threonine-protein kinase CBK1 (EC 2.7... 27 8.8
15PER44_ARATH (Q93V93) Peroxidase 44 precursor (EC 1.11.1.7) (Atpe... 27 8.8
16TLN1_HUMAN (Q9Y490) Talin-1 27 8.8
17RUVB_EHRRW (Q5HAK4) Holliday junction ATP-dependent DNA helicase... 27 8.8
18RUVB_EHRRG (Q5FG39) Holliday junction ATP-dependent DNA helicase... 27 8.8
19CUT1_CAEEL (Q03755) Cuticlin-1 precursor 27 8.8

>HTPG_NITWN (Q3SNS6) Chaperone protein htpG (Heat shock protein htpG) (High|
           temperature protein G)
          Length = 637

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -2

Query: 192 YLRFTDCRKSGSRRRTRTEKVGDPASGTDGSTPRFTISVDSSSRAMA 52
           +LR      + +  R R E + DPA  TD + PR +I++D+  R +A
Sbjct: 38  FLRELISNAADACERLRYEAISDPALLTDETRPRISITIDAERRQLA 84



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>CBK1_CANGA (Q6FP74) Serine/threonine-protein kinase CBK1 (EC 2.7.11.1)|
          Length = 773

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -2

Query: 141 TEKVGDPASGTDGSTPRFTISVDSSSRAMAGRSWVAAWR 25
           T K G P    DGS  R T+ VDS +  M+ R  +  WR
Sbjct: 537 TTKNGAPNDAGDGSNNRQTMIVDSINLTMSNRQQIQTWR 575



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>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
           (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -2

Query: 198 RTYLRFTDCRKSGSRRRTRTEKVGDPASGTDGSTPRFTISVDSSSRAM 55
           RT++     RK G+ RRT   KVG  ++ T  +T   T+S DS+  A+
Sbjct: 23  RTFVVPEARRKPGNGRRTSVSKVGSTSTSTT-TTTTTTLSADSNGAAV 69



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>SCG2_HUMAN (P13521) Secretogranin-2 precursor (Secretogranin II) (SgII)|
           (Chromogranin C) [Contains: Secretoneurin (SN)]
          Length = 617

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 227 GVYLATIPVIVLVCGAEVGSLSRDELWRK 313
           G  L+ IP+I L+ GAE  S  R++L +K
Sbjct: 10  GAALSLIPLIFLISGAEAASFQRNQLLQK 38



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>PRMA_CHLTE (Q8KG70) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 289

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -2

Query: 111 TDGSTPRFTISVDSSSRAMAGRSWVAAWRARL 16
           T GS PRFT S       MA R+W A W A L
Sbjct: 67  TFGSVPRFTASF------MADRNWNAEWEAHL 92



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>PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor component 2|
           (Progesterone membrane-binding protein) (Steroid
           receptor protein DG6)
          Length = 223

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 135 KVGDPASGTDGSTPRFTISVDSSSRAMAGRSWVAAWRARLVGGGD 1
           K+G   SG++ S    + S   +  A  G  W AA  A L GGG+
Sbjct: 9   KLGTLGSGSESSNDGGSESPGDAGAAAEGGGWAAAALALLTGGGE 53



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>RECX_PASMU (Q9CK20) Regulatory protein recX|
          Length = 164

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/53 (24%), Positives = 29/53 (54%)
 Frame = +2

Query: 71  LSTEIVNRGVEPSVPDAGSPTFSVRVRRRLPDFLQSVNLKYVRLGYHYLLSHG 229
           +S+ +++   +   PD      +V +R++ P + +  +LK  +  + Y+LSHG
Sbjct: 96  ISSALISEAEQTLAPDWQHHALTV-LRKKFPQYAEITDLKLKQKVWRYMLSHG 147



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>CHBG_SERMA (Q8L3B9) UPF0249 protein chbG|
          Length = 253

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 9/44 (20%)
 Frame = +2

Query: 200 LGYHYLLSHGVYLATIPVIVLVCG---------AEVGSLSRDEL 304
           +G H++L+HG  L  +P +V   G         AE G LS DE+
Sbjct: 58  IGLHFVLTHGKPLGAMPSLVNEHGELGKWLWRRAEAGELSLDEI 101



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>GLGA_HAEI8 (Q4QK70) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase)
          Length = 476

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 68  ELSTEIVNRGVEPSVPDAGSPTFSVRVRRRLPDFLQSVNLKYVRLGYHYLLSH 226
           E + EIV +G +  +  +G+P F   +R     + Q++    V++GY   LSH
Sbjct: 312 ESADEIVKQGGQLMILGSGAPHFEQGIRELAERYPQNI---AVKIGYDEALSH 361



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>MVIN_TREPA (O83529) Virulence factor mviN homolog|
          Length = 526

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +2

Query: 158 LPDFLQSVNLKYVRLGYHYLLSHGVYLATIPVIVLVCGAEVGSLSRDE 301
           +P +  S    Y   G H ++SHGV L    +I    G  +  LSRDE
Sbjct: 466 VPTWASSFFTAYFFPGSHKIISHGVPLCVEALIFSCTGCILLLLSRDE 513



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>RPGRH_CAEEL (Q5DX34) X-linked retinitis pigmentosa GTPase regulator homolog|
          Length = 1392

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -2

Query: 204  PSRTYLRFTDCRKSGSRRRTRTEKVGDPASGTDGSTPRFTISV 76
            P    +R    +K  S +   TE    P+  T+GSTPR  +++
Sbjct: 960  PQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNL 1002



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>DNAJ2_CORDI (Q6NEZ1) Chaperone protein dnaJ 2|
          Length = 390

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 177 DCRKSGSRRRTRTEKVGDPASGTDGSTPR 91
           DC  +G++RRTR+  V  PA   DG   R
Sbjct: 228 DCSGTGTQRRTRSITVRIPAGVVDGQKVR 256



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>ARLY2_RHILO (Q981V0) Argininosuccinate lyase 2 (EC 4.3.2.1) (Arginosuccinase 2)|
           (ASAL 2)
          Length = 927

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 8   PPTSLARQAATQLRPAMAREELSTEIVNRGVEPSVPDAG 124
           PP   AR  A + R A    +L +   +R  +P+VP+AG
Sbjct: 339 PPRGSARAGAIRFRLAPTSGKLKSLGFSRNPDPTVPEAG 377



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>CBK1_YEAST (P53894) Serine/threonine-protein kinase CBK1 (EC 2.7.11.1) (Cell|
           wall biosynthesis kinase)
          Length = 756

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 120 ASGTDGSTPRFTISVDSSSRAMAGRSWVAAWR 25
           A+ TD +  R T+ VDS S  M+ R  +  WR
Sbjct: 530 ANTTDTANKRQTMVVDSISLTMSNRQQIQTWR 561



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>PER44_ARATH (Q93V93) Peroxidase 44 precursor (EC 1.11.1.7) (Atperox P44)|
           (ATP35)
          Length = 310

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = +2

Query: 29  QAATQLRPAMAREELSTEIVNRGVEPSVPDAGSPTFSVRVRRR 157
           +A  QL  A  R     +IV      SV  AG P FSV   RR
Sbjct: 101 EAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRR 143



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>TLN1_HUMAN (Q9Y490) Talin-1|
          Length = 2541

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 129  GDPASGTDGSTPRFTISVDSSSRAMAGRSWVAAWRARLVGGGD 1
            G   +  +G+ P F  ++ ++S+A+ G +  AA  A LVG  D
Sbjct: 1409 GISQNAKNGNLPEFGDAISTASKALCGFTEAAAQAAYLVGVSD 1451



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>RUVB_EHRRW (Q5HAK4) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 331

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 59  AREELSTEIVNRGVEP-SVPDAGSPTFSVRVRRRLPDFL 172
           A + + T I N G E  S+   G+P  ++R+ RR+ DF+
Sbjct: 194 AAKVIHTNISNNGAEEISLRSRGTPRIALRLLRRIRDFI 232



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>RUVB_EHRRG (Q5FG39) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 331

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 59  AREELSTEIVNRGVEP-SVPDAGSPTFSVRVRRRLPDFL 172
           A + + T I N G E  S+   G+P  ++R+ RR+ DF+
Sbjct: 194 AAKVIHTNISNNGAEEISLRSRGTPRIALRLLRRIRDFI 232



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>CUT1_CAEEL (Q03755) Cuticlin-1 precursor|
          Length = 424

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +2

Query: 62  REELSTEIVNRGVEPSVPDAGSPTFSVRVRRRLPDFLQSVNLKYVRLGYHYLLSHGVYLA 241
           R E++T  +  G  PS P+A +      VRRR      S  +    +G+   L  G  +A
Sbjct: 351 RVEINTLDIMEGASPSAPEAAALVSEESVRRR----ATSTGICLTPIGFASFLGIGTIVA 406

Query: 242 T 244
           T
Sbjct: 407 T 407


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.137    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,997,231
Number of Sequences: 219361
Number of extensions: 509098
Number of successful extensions: 1503
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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