ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet31h09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117427 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 117368 Query: 63 ggttatagg 71 ||||||||| Sbjct: 117367 ggttatagg 117359
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 99 Query: 63 ggttatagg 71 ||||||||| Sbjct: 98 ggttatagg 90
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20534 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 20475 Query: 63 ggttatagg 71 ||||||||| Sbjct: 20474 ggttatagg 20466
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118511 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 118452 Query: 63 ggttatagg 71 ||||||||| Sbjct: 118451 ggttatagg 118443 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96645 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 96704 Query: 63 ggttatagg 71 ||||||||| Sbjct: 96705 ggttatagg 96713
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118511 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 118452 Query: 63 ggttatagg 71 ||||||||| Sbjct: 118451 ggttatagg 118443 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96645 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 96704 Query: 63 ggttatagg 71 ||||||||| Sbjct: 96705 ggttatagg 96713
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118460 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 118401 Query: 63 ggttatagg 71 ||||||||| Sbjct: 118400 ggttatagg 118392 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96590 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 96649 Query: 63 ggttatagg 71 ||||||||| Sbjct: 96650 ggttatagg 96658
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509223 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 31509282 Query: 63 ggttatagg 71 ||||||||| Sbjct: 31509283 ggttatagg 31509291 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320327 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 27320268 Query: 63 ggttatagg 71 ||||||||| Sbjct: 27320267 ggttatagg 27320259 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 228 cgccgccgtcgcgccgcgctcctcggctctcaacgtcggcctccagtccg 277 ||||| ||||||||||| | || |||| |||||| ||||||||||||||| Sbjct: 28253879 cgccgtcgtcgcgccgcccgccgcggcgctcaacatcggcctccagtccg 28253928 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 7888823 tcgacgccgacggcgacggc 7888804
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83373 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 83314 Query: 63 ggttatagg 71 ||||||||| Sbjct: 83313 ggttatagg 83305
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122252 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 122193 Query: 63 ggttatagg 71 ||||||||| Sbjct: 122192 ggttatagg 122184 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100485 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 100544 Query: 63 ggttatagg 71 ||||||||| Sbjct: 100545 ggttatagg 100553
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118480 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 118421 Query: 63 ggttatagg 71 ||||||||| Sbjct: 118420 ggttatagg 118412 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96638 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 96697 Query: 63 ggttatagg 71 ||||||||| Sbjct: 96698 ggttatagg 96706
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123686 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 123745 Query: 63 ggttatagg 71 ||||||||| Sbjct: 123746 ggttatagg 123754 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15412 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 15471 Query: 63 ggttatagg 71 ||||||||| Sbjct: 15472 ggttatagg 15480
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142220 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 142279 Query: 63 ggttatagg 71 ||||||||| Sbjct: 142280 ggttatagg 142288
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94816 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 94875 Query: 63 ggttatagg 71 ||||||||| Sbjct: 94876 ggttatagg 94884
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43470 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 43411 Query: 63 ggttatagg 71 ||||||||| Sbjct: 43410 ggttatagg 43402 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21647 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 21706 Query: 63 ggttatagg 71 ||||||||| Sbjct: 21707 ggttatagg 21715
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57199 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 57140 Query: 63 ggttatagg 71 ||||||||| Sbjct: 57139 ggttatagg 57131
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 41 Query: 63 ggttatagg 71 ||||||||| Sbjct: 40 ggttatagg 32
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28880 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 28939 Query: 63 ggttatagg 71 ||||||||| Sbjct: 28940 ggttatagg 28948
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269572 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 9269631 Query: 63 ggttatagg 71 ||||||||| Sbjct: 9269632 ggttatagg 9269640 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229072 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 9229131 Query: 63 ggttatagg 71 ||||||||| Sbjct: 9229132 ggttatagg 9229140 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165660 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 9165719 Query: 63 ggttatagg 71 ||||||||| Sbjct: 9165720 ggttatagg 9165728 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057486 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 9057545 Query: 63 ggttatagg 71 ||||||||| Sbjct: 9057546 ggttatagg 9057554 Score = 95.6 bits (48), Expect = 8e-17 Identities = 54/56 (96%) Strand = Plus / Plus Query: 16 cccttgttggtacggagggacggaggaggctaggttagccgaaagatggttatagg 71 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5792165 cccttattggtacggagggacggaggaggctaggttagccaaaagatggttatagg 5792220
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634393 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 5634334 Query: 63 ggttatagg 71 ||||||||| Sbjct: 5634333 ggttatagg 5634325
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939557 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 19939616 Query: 63 ggttatagg 71 ||||||||| Sbjct: 19939617 ggttatagg 19939625 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388424 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 10388483 Query: 63 ggttatagg 71 ||||||||| Sbjct: 10388484 ggttatagg 10388492 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275874 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 10275815 Query: 63 ggttatagg 71 ||||||||| Sbjct: 10275814 ggttatagg 10275806
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240709 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 9240650 Query: 63 ggttatagg 71 ||||||||| Sbjct: 9240649 ggttatagg 9240641
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599739 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 31599798 Query: 63 ggttatagg 71 ||||||||| Sbjct: 31599799 ggttatagg 31599807 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411650 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 27411591 Query: 63 ggttatagg 71 ||||||||| Sbjct: 27411590 ggttatagg 27411582 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 228 cgccgccgtcgcgccgcgctcctcggctctcaacgtcggcctccagtccg 277 ||||| ||||||||||| | || |||| |||||| ||||||||||||||| Sbjct: 28345203 cgccgtcgtcgcgccgcccgccgcggcgctcaacatcggcctccagtccg 28345252 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 7886658 tcgacgccgacggcgacggc 7886639
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46486 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 46427 Query: 63 ggttatagg 71 ||||||||| Sbjct: 46426 ggttatagg 46418
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122310 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 122251 Query: 63 ggttatagg 71 ||||||||| Sbjct: 122250 ggttatagg 122242 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100527 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 100586 Query: 63 ggttatagg 71 ||||||||| Sbjct: 100587 ggttatagg 100595
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51922 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 51863 Query: 63 ggttatagg 71 ||||||||| Sbjct: 51862 ggttatagg 51854
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6838 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 6897 Query: 63 ggttatagg 71 ||||||||| Sbjct: 6898 ggttatagg 6906
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 137 Query: 63 ggttatagg 71 ||||||||| Sbjct: 138 ggttatagg 146
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 1083 Query: 63 ggttatagg 71 ||||||||| Sbjct: 1084 ggttatagg 1092
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 357 Query: 63 ggttatagg 71 ||||||||| Sbjct: 358 ggttatagg 366
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 553 Query: 63 ggttatagg 71 ||||||||| Sbjct: 554 ggttatagg 562
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1219 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 1278 Query: 63 ggttatagg 71 ||||||||| Sbjct: 1279 ggttatagg 1287
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 422 Query: 63 ggttatagg 71 ||||||||| Sbjct: 423 ggttatagg 431
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1090 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 1149 Query: 63 ggttatagg 71 ||||||||| Sbjct: 1150 ggttatagg 1158
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1219 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 1278 Query: 63 ggttatagg 71 ||||||||| Sbjct: 1279 ggttatagg 1287
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 366 Query: 63 ggttatagg 71 ||||||||| Sbjct: 367 ggttatagg 375
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 901 Query: 63 ggttatagg 71 ||||||||| Sbjct: 902 ggttatagg 910
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950833 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 19950892 Query: 63 ggttatagg 71 ||||||||| Sbjct: 19950893 ggttatagg 19950901 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394463 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 10394522 Query: 63 ggttatagg 71 ||||||||| Sbjct: 10394523 ggttatagg 10394531 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281913 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 10281854 Query: 63 ggttatagg 71 ||||||||| Sbjct: 10281853 ggttatagg 10281845
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634382 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 5634323 Query: 63 ggttatagg 71 ||||||||| Sbjct: 5634322 ggttatagg 5634314
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18492 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 18551 Query: 63 ggttatagg 71 ||||||||| Sbjct: 18552 ggttatagg 18560
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123027 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 122968 Query: 63 ggttatagg 71 ||||||||| Sbjct: 122967 ggttatagg 122959 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101204 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 101263 Query: 63 ggttatagg 71 ||||||||| Sbjct: 101264 ggttatagg 101272
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118454 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 118395 Query: 63 ggttatagg 71 ||||||||| Sbjct: 118394 ggttatagg 118386 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96585 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 96644 Query: 63 ggttatagg 71 ||||||||| Sbjct: 96645 ggttatagg 96653
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118646 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 118587 Query: 63 ggttatagg 71 ||||||||| Sbjct: 118586 ggttatagg 118578 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96248 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 96307 Query: 63 ggttatagg 71 ||||||||| Sbjct: 96308 ggttatagg 96316
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 137 bits (69), Expect = 2e-29 Identities = 69/69 (100%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1426 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 1485 Query: 63 ggttatagg 71 ||||||||| Sbjct: 1486 ggttatagg 1494
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 367 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 426 Query: 63 ggttat 68 |||||| Sbjct: 427 ggttat 432
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 138088 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 138029 Query: 63 ggttat 68 |||||| Sbjct: 138028 ggttat 138023 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 111009 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 111068 Query: 63 ggttat 68 |||||| Sbjct: 111069 ggttat 111074
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 131359 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 131300 Query: 63 ggttat 68 |||||| Sbjct: 131299 ggttat 131294 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 105519 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 105578 Query: 63 ggttat 68 |||||| Sbjct: 105579 ggttat 105584
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 130251 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 130192 Query: 63 ggttat 68 |||||| Sbjct: 130191 ggttat 130186 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 104384 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 104443 Query: 63 ggttat 68 |||||| Sbjct: 104444 ggttat 104449
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 134485 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 134426 Query: 63 ggttat 68 |||||| Sbjct: 134425 ggttat 134420 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 107421 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 107480 Query: 63 ggttat 68 |||||| Sbjct: 107481 ggttat 107486
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 138942 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 138883 Query: 63 ggttat 68 |||||| Sbjct: 138882 ggttat 138877 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 111118 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 111177 Query: 63 ggttat 68 |||||| Sbjct: 111178 ggttat 111183
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 138164 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 138105 Query: 63 ggttat 68 |||||| Sbjct: 138104 ggttat 138099 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 111781 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 111840 Query: 63 ggttat 68 |||||| Sbjct: 111841 ggttat 111846
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 133576 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 133517 Query: 63 ggttat 68 |||||| Sbjct: 133516 ggttat 133511 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 106706 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 106765 Query: 63 ggttat 68 |||||| Sbjct: 106766 ggttat 106771
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 130375 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 130316 Query: 63 ggttat 68 |||||| Sbjct: 130315 ggttat 130310 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 103070 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 103129 Query: 63 ggttat 68 |||||| Sbjct: 103130 ggttat 103135
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1415 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 1474 Query: 63 ggttat 68 |||||| Sbjct: 1475 ggttat 1480
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 87678 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 87737 Query: 63 ggttat 68 |||||| Sbjct: 87738 ggttat 87743
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 131582 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 131523 Query: 63 ggttat 68 |||||| Sbjct: 131522 ggttat 131517 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 105182 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 105241 Query: 63 ggttat 68 |||||| Sbjct: 105242 ggttat 105247
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1404 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 1463 Query: 63 ggttat 68 |||||| Sbjct: 1464 ggttat 1469
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 126451 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 126392 Query: 63 ggttat 68 |||||| Sbjct: 126391 ggttat 126386 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 108471 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 108530 Query: 63 ggttat 68 |||||| Sbjct: 108531 ggttat 108536
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 135176 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 135117 Query: 63 ggttat 68 |||||| Sbjct: 135116 ggttat 135111 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 107249 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 107308 Query: 63 ggttat 68 |||||| Sbjct: 107309 ggttat 107314
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 134764 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 134705 Query: 63 ggttat 68 |||||| Sbjct: 134704 ggttat 134699 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 107643 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 107702 Query: 63 ggttat 68 |||||| Sbjct: 107703 ggttat 107708
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 132807 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 132748 Query: 63 ggttat 68 |||||| Sbjct: 132747 ggttat 132742 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 105164 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 105223 Query: 63 ggttat 68 |||||| Sbjct: 105224 ggttat 105229
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 132543 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 132484 Query: 63 ggttat 68 |||||| Sbjct: 132483 ggttat 132478 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 106106 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 106165 Query: 63 ggttat 68 |||||| Sbjct: 106166 ggttat 106171
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 129114 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 129055 Query: 63 ggttat 68 |||||| Sbjct: 129054 ggttat 129049 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 103342 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 103401 Query: 63 ggttat 68 |||||| Sbjct: 103402 ggttat 103407
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 131352 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 131293 Query: 63 ggttat 68 |||||| Sbjct: 131292 ggttat 131287 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 105517 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 105576 Query: 63 ggttat 68 |||||| Sbjct: 105577 ggttat 105582
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 138293 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 138234 Query: 63 ggttat 68 |||||| Sbjct: 138233 ggttat 138228 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 111006 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 111065 Query: 63 ggttat 68 |||||| Sbjct: 111066 ggttat 111071
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1051 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 1110 Query: 63 ggttat 68 |||||| Sbjct: 1111 ggttat 1116
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 115 bits (58), Expect = 9e-23 Identities = 64/66 (96%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 89765 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 89824 Query: 63 ggttat 68 |||||| Sbjct: 89825 ggttat 89830
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 134884 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 134825 Query: 63 ggttat 68 |||||| Sbjct: 134824 ggttat 134819 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 107746 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 107805 Query: 63 ggttat 68 |||||| Sbjct: 107806 ggttat 107811
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 5636 attcctgtactacctcttgttggtcccgagggacggaggaggctaggttagccgaaagat 5695 Query: 63 ggttat 68 |||||| Sbjct: 5696 ggttat 5701
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 135522 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 135463 Query: 63 ggttat 68 |||||| Sbjct: 135462 ggttat 135457 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 108035 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 108094 Query: 63 ggttat 68 |||||| Sbjct: 108095 ggttat 108100
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 141463 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 141404 Query: 63 ggttat 68 |||||| Sbjct: 141403 ggttat 141398 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 111865 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 111924 Query: 63 ggttat 68 |||||| Sbjct: 111925 ggttat 111930
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1433 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 1492 Query: 63 ggttat 68 |||||| Sbjct: 1493 ggttat 1498
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 2940 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 2999 Query: 63 ggttat 68 |||||| Sbjct: 3000 ggttat 3005
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 134130 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 134071 Query: 63 ggttat 68 |||||| Sbjct: 134070 ggttat 134065 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 106906 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 106965 Query: 63 ggttat 68 |||||| Sbjct: 106966 ggttat 106971
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 3185 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 3244 Query: 63 ggttat 68 |||||| Sbjct: 3245 ggttat 3250
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 22289 attcctgtactacctcttgttggtcccgagggacggaggaggctaggttagccgaaagat 22230 Query: 63 ggttat 68 |||||| Sbjct: 22229 ggttat 22224
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 1420 attcctgtactaccccttgttggtcccgagggacgaaggaggctaggttagccgaaagat 1479 Query: 63 ggttat 68 |||||| Sbjct: 1480 ggttat 1485
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 134265 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 134206 Query: 63 ggttat 68 |||||| Sbjct: 134205 ggttat 134200 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 107078 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 107137 Query: 63 ggttat 68 |||||| Sbjct: 107138 ggttat 107143
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 134263 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 134204 Query: 63 ggttat 68 |||||| Sbjct: 134203 ggttat 134198 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 107075 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 107134 Query: 63 ggttat 68 |||||| Sbjct: 107135 ggttat 107140
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 134175 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 134116 Query: 63 ggttat 68 |||||| Sbjct: 134115 ggttat 134110 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 106953 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 107012 Query: 63 ggttat 68 |||||| Sbjct: 107013 ggttat 107018
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 130451 attcctgtactaccctttgttggtcccgagggacggaggaggctaggttagccgaaagat 130392 Query: 63 ggttat 68 |||||| Sbjct: 130391 ggttat 130386 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 104943 attcctgtactaccctttgttggtcccgagggacggaggaggctaggttagccgaaagat 105002 Query: 63 ggttat 68 |||||| Sbjct: 105003 ggttat 105008
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 134882 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 134823 Query: 63 ggttat 68 |||||| Sbjct: 134822 ggttat 134817 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 107744 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 107803 Query: 63 ggttat 68 |||||| Sbjct: 107804 ggttat 107809
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 116729 attcctgtactaccccttgttggtcccgagggacgaaggaggctaggttagccgaaagat 116670 Query: 63 ggttat 68 |||||| Sbjct: 116669 ggttat 116664 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 91373 attcctgtactaccccttgttggtcccgagggacgaaggaggctaggttagccgaaagat 91432 Query: 63 ggttat 68 |||||| Sbjct: 91433 ggttat 91438
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 127022 attcctgtactactccttgttggtcccgagggacggaggaggctaggttagccgaaagat 126963 Query: 63 ggttat 68 |||||| Sbjct: 126962 ggttat 126957 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 96425 attcctgtactactccttgttggtcccgagggacggaggaggctaggttagccgaaagat 96484 Query: 63 ggttat 68 |||||| Sbjct: 96485 ggttat 96490
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 134613 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 134554 Query: 63 ggttat 68 |||||| Sbjct: 134553 ggttat 134548 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 107525 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 107584 Query: 63 ggttat 68 |||||| Sbjct: 107585 ggttat 107590
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 134142 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 134083 Query: 63 ggttat 68 |||||| Sbjct: 134082 ggttat 134077 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 106920 attcctgtactaccccttgttagtcccgagggacggaggaggctaggttagccgaaagat 106979 Query: 63 ggttat 68 |||||| Sbjct: 106980 ggttat 106985
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 877 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 936 Query: 63 ggttat 68 |||||| Sbjct: 937 ggttat 942
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 5908 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 5967 Query: 63 ggttat 68 |||||| Sbjct: 5968 ggttat 5973
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1512 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 1571 Query: 63 ggttat 68 |||||| Sbjct: 1572 ggttat 1577
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 5908 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 5967 Query: 63 ggttat 68 |||||| Sbjct: 5968 ggttat 5973
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 107 bits (54), Expect = 2e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1417 attcctgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaagat 1476 Query: 63 ggttat 68 |||||| Sbjct: 1477 ggttat 1482
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 103 bits (52), Expect = 3e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct: 140691 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaaggt 140632 Query: 63 ggtt 66 |||| Sbjct: 140631 ggtt 140628 Score = 103 bits (52), Expect = 3e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct: 112966 attcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaaggt 113025 Query: 63 ggtt 66 |||| Sbjct: 113026 ggtt 113029
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 99.6 bits (50), Expect = 5e-18 Identities = 63/66 (95%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 114792 attcctgtactaccccttgttggtcccgagggacg-aggaggctaggttagccgaaagat 114734 Query: 63 ggttat 68 |||||| Sbjct: 114733 ggttat 114728 Score = 99.6 bits (50), Expect = 5e-18 Identities = 63/66 (95%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 87328 attcctgtactaccccttgttggtcccgagggacg-aggaggctaggttagccgaaagat 87386 Query: 63 ggttat 68 |||||| Sbjct: 87387 ggttat 87392
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 99.6 bits (50), Expect = 5e-18 Identities = 62/66 (93%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||| Sbjct: 145134 attcctgtactaccccttgttggtcccgagggacggaggaggctaagttagccgagagat 145075 Query: 63 ggttat 68 |||||| Sbjct: 145074 ggttat 145069 Score = 99.6 bits (50), Expect = 5e-18 Identities = 62/66 (93%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||| Sbjct: 113328 attcctgtactaccccttgttggtcccgagggacggaggaggctaagttagccgagagat 113387 Query: 63 ggttat 68 |||||| Sbjct: 113388 ggttat 113393
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 99.6 bits (50), Expect = 5e-18 Identities = 63/66 (95%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 685 attcctgtactaccctttgttggtccg-agggacggaggaggctaggttagccgaaagat 743 Query: 63 ggttat 68 |||||| Sbjct: 744 ggttat 749
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 99.6 bits (50), Expect = 5e-18 Identities = 62/66 (93%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||||||||||||||||| |||| | ||||||||||| ||||||||||||||||||||| Sbjct: 1424 attcctgtactaccccttgctggtcccgagggacggagtaggctaggttagccgaaagat 1483 Query: 63 ggttat 68 |||||| Sbjct: 1484 ggttat 1489
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 99.6 bits (50), Expect = 5e-18 Identities = 62/66 (93%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 1912 attcctgtactaccccttgtagggcccgagggacggaggaggctaggttagccgaaagat 1971 Query: 63 ggttat 68 |||||| Sbjct: 1972 ggttat 1977
>emb|AL731620.2|OSJN00270 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003A12, complete sequence Length = 164425 Score = 95.6 bits (48), Expect = 8e-17 Identities = 54/56 (96%) Strand = Plus / Plus Query: 16 cccttgttggtacggagggacggaggaggctaggttagccgaaagatggttatagg 71 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 87151 cccttattggtacggagggacggaggaggctaggttagccaaaagatggttatagg 87206
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 91.7 bits (46), Expect = 1e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct: 145348 attcccgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaaggt 145407 Query: 63 ggttat 68 |||||| Sbjct: 145408 ggttat 145413 Score = 91.7 bits (46), Expect = 1e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct: 87503 attcccgtactgccccttgttggtcccgagggacggaggaggctaggttagccgaaaggt 87444 Query: 63 ggttat 68 |||||| Sbjct: 87443 ggttat 87438
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 91.7 bits (46), Expect = 1e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 7 ctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagatggtt 66 |||||||||||||||||||| | ||||||||||| |||||||||||||| |||||||||| Sbjct: 1425 ctgtactaccccttgttggtcccgagggacggagcaggctaggttagccaaaagatggtt 1484 Query: 67 at 68 || Sbjct: 1485 at 1486
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 91.7 bits (46), Expect = 1e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||| || |||||||| | |||||||||||||||||||||||||||||| || Sbjct: 5147 attcctgtactatcctttgttggtcccgagggacggaggaggctaggttagccgaaaaat 5088 Query: 63 ggttat 68 |||||| Sbjct: 5087 ggttat 5082
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 85.7 bits (43), Expect = 8e-14 Identities = 62/67 (92%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 3 attcctgtactacccc-ttgttggtacggagggacggaggaggctaggttagccgaaaga 61 |||||||||| ||||| |||||||| | |||||||||||||||||||||||||||| ||| Sbjct: 1420 attcctgtaccacccccttgttggtcccgagggacggaggaggctaggttagccgagaga 1479 Query: 62 tggttat 68 ||||||| Sbjct: 1480 tggttat 1486
>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence Length = 116699 Score = 81.8 bits (41), Expect = 1e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 20 tgttggtacggagggacggaggaggctaggttagccgaaagatggttat 68 ||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 77547 tgttggtcccgagggacggaggaggctaggttagccgaaagatggttat 77499
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 75.8 bits (38), Expect = 7e-11 Identities = 59/66 (89%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 ||||| |||||||| ||||||||| | |||| |||||||||||||||||||| |||| || Sbjct: 2399 attccagtactacctcttgttggtcccgaggtacggaggaggctaggttagcagaaaaat 2340 Query: 63 ggttat 68 |||||| Sbjct: 2339 ggttat 2334
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 75.8 bits (38), Expect = 7e-11 Identities = 59/66 (89%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||| || | |||||| | ||||||||||| ||| ||||||||||||||||| Sbjct: 5313 attcctgtactatccttagttggtcccgagggacggagaaggttaggttagccgaaagat 5372 Query: 63 ggttat 68 |||||| Sbjct: 5373 ggttat 5378
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 75.8 bits (38), Expect = 7e-11 Identities = 59/66 (89%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||| || | |||||| | ||||||||||| ||| ||||||||||||||||| Sbjct: 1423 attcctgtactatccttagttggtcccgagggacggagaaggttaggttagccgaaagat 1482 Query: 63 ggttat 68 |||||| Sbjct: 1483 ggttat 1488
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 75.8 bits (38), Expect = 7e-11 Identities = 59/66 (89%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||| || | |||||| | ||||||||||| ||| ||||||||||||||||| Sbjct: 149822 attcctgtactatccttagttggtcccgagggacggagaaggttaggttagccgaaagat 149763 Query: 63 ggttat 68 |||||| Sbjct: 149762 ggttat 149757 Score = 75.8 bits (38), Expect = 7e-11 Identities = 59/66 (89%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||| || | |||||| | ||||||||||| ||| ||||||||||||||||| Sbjct: 118844 attcctgtactatccttagttggtcccgagggacggagaaggttaggttagccgaaagat 118903 Query: 63 ggttat 68 |||||| Sbjct: 118904 ggttat 118909
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 75.8 bits (38), Expect = 7e-11 Identities = 59/66 (89%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||||| || | |||||| | ||||||||||| ||| ||||||||||||||||| Sbjct: 1423 attcctgtactatccttagttggtcccgagggacggagaaggttaggttagccgaaagat 1482 Query: 63 ggttat 68 |||||| Sbjct: 1483 ggttat 1488
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/68 (89%), Gaps = 2/68 (2%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagcc--gaaag 60 ||||||||||||||||| | |||| | ||||||||||| |||||||||||||| ||||| Sbjct: 51268 attcctgtactacccctcgctggtcccgagggacggagcaggctaggttagccgagaaag 51209 Query: 61 atggttat 68 |||||||| Sbjct: 51208 atggttat 51201 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/68 (89%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagcc--gaaag 60 ||||||||||||||||| | |||| | ||||||||||| |||||||||||||| ||||| Sbjct: 38560 attcctgtactacccctcgctggtcccgagggacggagcaggctaggttagccgagaaag 38619 Query: 61 atggttat 68 |||||||| Sbjct: 38620 atggttat 38627
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/68 (89%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagcc--gaaag 60 ||||||||||||||||| | |||| | ||||||||||| |||||||||||||| ||||| Sbjct: 5488 attcctgtactacccctcgctggtcccgagggacggagcaggctaggttagccgagaaag 5547 Query: 61 atggttat 68 |||||||| Sbjct: 5548 atggttat 5555
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 69.9 bits (35), Expect = 5e-09 Identities = 61/67 (91%), Gaps = 2/67 (2%) Strand = Plus / Minus Query: 3 attcctgtactaccccttgttggt-acggagggacggaggaggctaggttagccgaaaga 61 ||||||||||||||| | |||||| |||| |||||||||||||| ||||||||||| ||| Sbjct: 137842 attcctgtactacccatcgttggtcacgg-gggacggaggaggccaggttagccgagaga 137784 Query: 62 tggttat 68 ||||||| Sbjct: 137783 tggttat 137777 Score = 69.9 bits (35), Expect = 5e-09 Identities = 61/67 (91%), Gaps = 2/67 (2%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggt-acggagggacggaggaggctaggttagccgaaaga 61 ||||||||||||||| | |||||| |||| |||||||||||||| ||||||||||| ||| Sbjct: 84035 attcctgtactacccatcgttggtcacgg-gggacggaggaggccaggttagccgagaga 84093 Query: 62 tggttat 68 ||||||| Sbjct: 84094 tggttat 84100
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 63.9 bits (32), Expect = 3e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 37 ggaggaggctaggttagccgaaagatggttat 68 |||||||||||||||||||||||||||||||| Sbjct: 393068 ggaggaggctaggttagccgaaagatggttat 393099
>gb|U73031.1|NSU73031 Nicotiana sylvestris mitochondrial sequence Length = 1799 Score = 63.9 bits (32), Expect = 3e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 37 ggaggaggctaggttagccgaaagatggttat 68 |||||||||||||||||||||||||||||||| Sbjct: 1351 ggaggaggctaggttagccgaaagatggttat 1320
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||| ||||||| || || | ||||||||||| ||||||| |||||||||| || Sbjct: 5452 attcctgtaccaccccttatttgtcccgagggacggagaaggctagattagccgaaaaat 5511 Query: 63 ggt 65 ||| Sbjct: 5512 ggt 5514
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||| ||||||| || || | ||||||||||| ||||||| |||||||||| || Sbjct: 1419 attcctgtaccaccccttatttgtcccgagggacggagaaggctagattagccgaaaaat 1478 Query: 63 ggt 65 ||| Sbjct: 1479 ggt 1481
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||| ||||||| || || | ||||||||||| ||||||| |||||||||| || Sbjct: 1419 attcctgtaccaccccttatttgtcccgagggacggagaaggctagattagccgaaaaat 1478 Query: 63 ggt 65 ||| Sbjct: 1479 ggt 1481
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 19 ttgttggtacggagggacggaggaggctaggttagccgaaagatggttat 68 |||||||| | ||||||||||| |||||| |||||||||| ||||||||| Sbjct: 1422 ttgttggtcccgagggacggagaaggctaagttagccgaaggatggttat 1471
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 19 ttgttggtacggagggacggaggaggctaggttagccgaaagatggttat 68 |||||||| | ||||||||||| |||||| |||||||||| ||||||||| Sbjct: 123843 ttgttggtcccgagggacggagaaggctaagttagccgaaggatggttat 123794 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 19 ttgttggtacggagggacggaggaggctaggttagccgaaagatggttat 68 |||||||| | ||||||||||| |||||| |||||||||| ||||||||| Sbjct: 96023 ttgttggtcccgagggacggagaaggctaagttagccgaaggatggttat 96072
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 3 attcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagat 62 |||||||||| ||||||| || || | ||||||||||| ||||||| || ||||||| || Sbjct: 1414 attcctgtaccaccccttatttgtcccgagggacggagaaggctagattggccgaaaaat 1473 Query: 63 ggt 65 ||| Sbjct: 1474 ggt 1476
>ref|XM_469482.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1233 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 228 cgccgccgtcgcgccgcgctcctcggctctcaacgtcggcctccagtccg 277 ||||| ||||||||||| | || |||| |||||| ||||||||||||||| Sbjct: 421 cgccgtcgtcgcgccgcccgccgcggcgctcaacatcggcctccagtccg 470
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 30 gagggacggaggaggctaggttagccgaaagatggttatagg 71 ||||||||||| ||||||||||| || ||| ||||||||||| Sbjct: 1448 gagggacggagtaggctaggttaaccaaaatatggttatagg 1489
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 228 cgccgccgtcgcgccgcgctcctcggctctcaacgtcggcctccagtccg 277 ||||| ||||||||||| | || |||| |||||| ||||||||||||||| Sbjct: 105020 cgccgtcgtcgcgccgcccgccgcggcgctcaacatcggcctccagtccg 105069
>dbj|AK105828.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E04, full insert sequence Length = 1253 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 228 cgccgccgtcgcgccgcgctcctcggctctcaacgtcggcctccagtccg 277 ||||| ||||||||||| | || |||| |||||| ||||||||||||||| Sbjct: 458 cgccgtcgtcgcgccgcccgccgcggcgctcaacatcggcctccagtccg 507
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 224 cctgcgccgccgtcgcgccgcgctc 248 ||||||||||||||||||||||||| Sbjct: 2260541 cctgcgccgccgtcgcgccgcgctc 2260565 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cgcctgcgccgccgtcgcgc 241 |||||||||||||||||||| Sbjct: 3492214 cgcctgcgccgccgtcgcgc 3492233
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 224 cctgcgccgccgtcgcgccgcgctc 248 ||||||||||||||||||||||||| Sbjct: 3434039 cctgcgccgccgtcgcgccgcgctc 3434063 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gcgccgccgtcgcgccgcgc 246 |||||||||||||||||||| Sbjct: 949392 gcgccgccgtcgcgccgcgc 949411 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cgcctgcgccgccgtcgcgc 241 |||||||||||||||||||| Sbjct: 528471 cgcctgcgccgccgtcgcgc 528490
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 224 cctgcgccgccgtcgcgccgcgctc 248 ||||||||||||||||||||||||| Sbjct: 3175136 cctgcgccgccgtcgcgccgcgctc 3175160 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cgcctgcgccgccgtcgcgc 241 |||||||||||||||||||| Sbjct: 337127 cgcctgcgccgccgtcgcgc 337146
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 48.1 bits (24), Expect = 0.017 Identities = 51/59 (86%), Gaps = 2/59 (3%) Strand = Plus / Plus Query: 2 gattcctgtactaccccttgttggtacg--gagggacggaggaggctaggttagccgaa 58 ||||||||||||||||||||| || | |||||||||||||||||| | |||||||| Sbjct: 1519 gattcctgtactaccccttgtcggcaataagagggacggaggaggctaagctagccgaa 1577
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 46.1 bits (23), Expect = 0.066 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ccgtcgacgccgacggcgacggc 297 ||||||||||||||||||||||| Sbjct: 4826698 ccgtcgacgccgacggcgacggc 4826720 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcgtg 300 |||||||||||||||||||||| Sbjct: 1022145 cgacgccgacggcgacggcgtg 1022124
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 46.1 bits (23), Expect = 0.066 Identities = 23/23 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggcgtg 300 ||||||||||||||||||||||| Sbjct: 346579 tcgacgccgacggcgacggcgtg 346601
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 46.1 bits (23), Expect = 0.066 Identities = 23/23 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggcgtg 300 ||||||||||||||||||||||| Sbjct: 341341 tcgacgccgacggcgacggcgtg 341363
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 46.1 bits (23), Expect = 0.066 Identities = 26/27 (96%) Strand = Plus / Plus Query: 30 gagggacggaggaggctaggttagccg 56 |||||||| |||||||||||||||||| Sbjct: 1429 gagggacgaaggaggctaggttagccg 1455
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.066 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ccgtcgacgccgacggcgacggc 297 ||||||||||||||||||||||| Sbjct: 5109054 ccgtcgacgccgacggcgacggc 5109076 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcgtg 300 |||||||||||||||||||||| Sbjct: 893218 cgacgccgacggcgacggcgtg 893197
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 46.1 bits (23), Expect = 0.066 Identities = 35/39 (89%) Strand = Plus / Plus Query: 30 gagggacggaggaggctaggttagccgaaagatggttat 68 ||||||||||| |||||| |||| ||||| ||||||||| Sbjct: 1427 gagggacggagaaggctaagttatccgaatgatggttat 1465
>ref|XM_463730.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 615 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 cgtcgacgccgacggcgacggc 297 |||||||||||||||||||||| Sbjct: 507 cgtcgacgccgacggcgacggc 528 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 389 tcgacgccgacggcgacggc 408
>gb|BT016402.1| Zea mays clone Contig235 mRNA sequence Length = 1103 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 cgtcgacgccgacggcgacggc 297 |||||||||||||||||||||| Sbjct: 557 cgtcgacgccgacggcgacggc 578
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Minus Query: 221 tcgcctgcgccgccgtcgcgccgcgctcct 250 ||||||||||||| ||| |||||||||||| Sbjct: 1853589 tcgcctgcgccgctgtcccgccgcgctcct 1853560
>emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster for borrelidin biosynthesis Length = 74787 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 280 gacgccgacggcgacggcgtga 301 |||||||||||||||||||||| Sbjct: 74330 gacgccgacggcgacggcgtga 74309
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 cgtcgacgccgacggcgacggc 297 |||||||||||||||||||||| Sbjct: 41811301 cgtcgacgccgacggcgacggc 41811322 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 41811183 tcgacgccgacggcgacggc 41811202 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 12787744 cgacgccgacggcgacggcg 12787725 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tccgtcgacgccgacggcga 293 |||||||||||||||||||| Sbjct: 9454756 tccgtcgacgccgacggcga 9454775
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 cgtcgacgccgacggcgacggc 297 |||||||||||||||||||||| Sbjct: 54677 cgtcgacgccgacggcgacggc 54698 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 54559 tcgacgccgacggcgacggc 54578
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 cgtcgacgccgacggcgacggc 297 |||||||||||||||||||||| Sbjct: 2404468 cgtcgacgccgacggcgacggc 2404489
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 aaagatggttatagggcgcgcggtat 82 ||||||||||||||||| |||||||| Sbjct: 1606125 aaagatggttatagggctcgcggtat 1606100
>dbj|AK072758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142M19, full insert sequence Length = 1006 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 cgtcgacgccgacggcgacggc 297 |||||||||||||||||||||| Sbjct: 545 cgtcgacgccgacggcgacggc 566 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 427 tcgacgccgacggcgacggc 446
>dbj|AK058802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-B01, full insert sequence Length = 901 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 cgtcgacgccgacggcgacggc 297 |||||||||||||||||||||| Sbjct: 561 cgtcgacgccgacggcgacggc 582 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 443 tcgacgccgacggcgacggc 462
>gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1532_D06, complete sequence Length = 127150 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gtccgtcgacgccgacggcga 293 ||||||||||||||||||||| Sbjct: 46769 gtccgtcgacgccgacggcga 46749
>ref|XM_476200.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 471 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gtccgtcgacgccgacggcga 293 ||||||||||||||||||||| Sbjct: 390 gtccgtcgacgccgacggcga 410
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 cgccgccgtcgcgccgcgctc 248 ||||||||||||||||||||| Sbjct: 673032 cgccgccgtcgcgccgcgctc 673052
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 ctcctcgcctgcgccgccgtc 237 ||||||||||||||||||||| Sbjct: 2490777 ctcctcgcctgcgccgccgtc 2490757
>gb|AC009030.10| Homo sapiens chromosome 16 clone RP11-13G6, complete sequence Length = 189379 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 cagaggcagttgccggcggctgcat 192 ||||||||||||| ||||||||||| Sbjct: 156735 cagaggcagttgcgggcggctgcat 156759
>emb|X55942.1|SCWHIE S. coelicolor whiE locus DNA Length = 5749 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 275 ccgtcgacgccgacggcgacggcgt 299 |||||||||||||||||| |||||| Sbjct: 1290 ccgtcgacgccgacggcggcggcgt 1266
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 cgccgccgtcgcgccgcgctc 248 ||||||||||||||||||||| Sbjct: 1992120 cgccgccgtcgcgccgcgctc 1992140
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ccgtcgacgccgacggcgacggcgt 299 |||||||||||||||||| |||||| Sbjct: 109242 ccgtcgacgccgacggcggcggcgt 109266
>emb|AJ223627.1|TCAJ3627 Tribolium castaneum mRNA for orthodenticle-1 protein Length = 1959 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcgt 299 ||||||||||||||||||||| Sbjct: 943 cgacgccgacggcgacggcgt 923
>gb|AE012414.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 322 of 460 of the complete genome Length = 12393 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cgcctgcgccgccgtcgcgcc 242 ||||||||||||||||||||| Sbjct: 5192 cgcctgcgccgccgtcgcgcc 5212
>gb|AE012487.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 395 of 460 of the complete genome Length = 10967 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cgcctgcgccgccgtcgcgcc 242 ||||||||||||||||||||| Sbjct: 3671 cgcctgcgccgccgtcgcgcc 3691
>gb|DQ404325.1| Lolium perenne clone LpSSR005 SSR marker genomic sequence Length = 648 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 tgtactaccccttgttggtac 28 ||||||||||||||||||||| Sbjct: 475 tgtactaccccttgttggtac 495
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 30 gagggacggaggaggctaggttagccgaa 58 |||||||||||||||||| | |||||||| Sbjct: 1432 gagggacggaggaggctaagctagccgaa 1460
>gb|AY224437.1| Oryza sativa (japonica cultivar-group) isolate 21652 calmodulin-related protein mRNA, partial cds Length = 583 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gtccgtcgacgccgacggcga 293 ||||||||||||||||||||| Sbjct: 489 gtccgtcgacgccgacggcga 509
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cgcctgcgccgccgtcgcgcc 242 ||||||||||||||||||||| Sbjct: 4421268 cgcctgcgccgccgtcgcgcc 4421288
>ref|NM_001039424.1| Tribolium castaneum orthodenticle-1 (otd1), mRNA Length = 1959 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcgt 299 ||||||||||||||||||||| Sbjct: 943 cgacgccgacggcgacggcgt 923
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 cgccgccgtcgcgccgcgctc 248 ||||||||||||||||||||| Sbjct: 809619 cgccgccgtcgcgccgcgctc 809599
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 acgccgacggcgacggcgtga 301 ||||||||||||||||||||| Sbjct: 156314 acgccgacggcgacggcgtga 156294
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cgcctgcgccgccgtcgcgcc 242 ||||||||||||||||||||| Sbjct: 1868242 cgcctgcgccgccgtcgcgcc 1868262
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gtccgtcgacgccgacggcga 293 ||||||||||||||||||||| Sbjct: 7433700 gtccgtcgacgccgacggcga 7433680 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tcctcgcctgcgccgccgtc 237 |||||||||||||||||||| Sbjct: 10256987 tcctcgcctgcgccgccgtc 10256968
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 30 gagggacggaggaggctaggttagccgaa 58 |||||||||||||||||| | |||||||| Sbjct: 1445 gagggacggaggaggctaagctagccgaa 1473
>gb|AC130449.2| Homo sapiens chromosome 16 clone CTA-233A7, complete sequence Length = 175104 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 cagaggcagttgccggcggctgcat 192 ||||||||||||| ||||||||||| Sbjct: 58907 cagaggcagttgcgggcggctgcat 58883
>dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0025H18 Length = 176201 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cgcctgcgccgccgtcgcgcc 242 ||||||||||||||||||||| Sbjct: 17410 cgcctgcgccgccgtcgcgcc 17430
>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1227_D07 Length = 118358 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cgcctgcgccgccgtcgcgcc 242 ||||||||||||||||||||| Sbjct: 106904 cgcctgcgccgccgtcgcgcc 106924
>dbj|AK071661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D07, full insert sequence Length = 840 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gtccgtcgacgccgacggcga 293 ||||||||||||||||||||| Sbjct: 521 gtccgtcgacgccgacggcga 541
>gb|AC149318.2| Phakopsora pachyrhizi clone JGIAFNA-101K16, complete sequence Length = 38351 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 cctgcgccgccgtcgcgccgc 244 ||||||||||||||||||||| Sbjct: 12299 cctgcgccgccgtcgcgccgc 12319
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 cgccgccgtcgcgccgcgctc 248 ||||||||||||||||||||| Sbjct: 1060371 cgccgccgtcgcgccgcgctc 1060351
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 cgtcgacgccgacggcgacgg 296 ||||||||||||||||||||| Sbjct: 1550966 cgtcgacgccgacggcgacgg 1550986
>ref|NM_188077.1| Oryza sativa (japonica cultivar-group), Ozsa8497 predicted mRNA Length = 1926 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tccgtcgacgccgacggcga 293 |||||||||||||||||||| Sbjct: 1027 tccgtcgacgccgacggcga 1046
>ref|NM_183869.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1155 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 135 cgacgccgacggcgacggcg 116
>ref|NM_186423.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1365 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||||| |||||||||||||| Sbjct: 536 ccgtcgacggcgacggcgacggcg 559
>ref|NM_186413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 534 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||||| |||||||||||||| Sbjct: 247 ccgtcgacggcgacggcgacggcg 270
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 cgtcgacgccgacggcgacggcgt 299 ||||||||||| |||||||||||| Sbjct: 34284 cgtcgacgccgtcggcgacggcgt 34307
>gb|BT018149.1| Zea mays clone EL01N0555F07.c mRNA sequence Length = 1650 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 368 tcgacgccgacggcgacggc 387
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 50572 tcgacgccgacggcgacggc 50591
>gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0048P17, complete sequence Length = 149883 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||| |||||||||||||||| Sbjct: 18248 ccgtcgaggccgacggcgacggcg 18225
>gb|AC137607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0006O14, complete sequence Length = 142764 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tcctcgcctgcgccgccgtc 237 |||||||||||||||||||| Sbjct: 40552 tcctcgcctgcgccgccgtc 40533
>gb|AY555278.1| Mus musculus strain 129/SvJ chromosome 17 clone 522h13, complete sequence Length = 148334 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tccagctgctggcggccgcc 105 |||||||||||||||||||| Sbjct: 52487 tccagctgctggcggccgcc 52468
>ref|XM_976113.1| PREDICTED: Mus musculus similar to RT1 class Ia, locus A1 (LOC674137), mRNA Length = 1468 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tccagctgctggcggccgcc 105 |||||||||||||||||||| Sbjct: 270 tccagctgctggcggccgcc 289
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 234212 tcgacgccgacggcgacggc 234231
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gtcgacgccgacggcgacgg 296 |||||||||||||||||||| Sbjct: 304465 gtcgacgccgacggcgacgg 304446
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 21822 cgacgccgacggcgacggcg 21803
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cgccgccgtcgcgccgcgctcctc 251 |||||||||||| ||||||||||| Sbjct: 49133 cgccgccgtcgctccgcgctcctc 49110
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ctcgcctgcgccgccgtcgcgccg 243 ||||||||||||||| |||||||| Sbjct: 296957 ctcgcctgcgccgccttcgcgccg 296934
>gb|AC010030.10| Drosophila melanogaster 3L BAC RP98-2C14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 200859 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cgtcgacgccgacggcgacg 295 |||||||||||||||||||| Sbjct: 39725 cgtcgacgccgacggcgacg 39706
>gb|AE005709.1| Caulobacter crescentus CB15 section 35 of 359 of the complete genome Length = 10538 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gccggcggctgcatgcgcgtctac 202 |||||||||||||||| ||||||| Sbjct: 4171 gccggcggctgcatgcacgtctac 4148
>gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene cluster, complete sequence Length = 20300 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 14694 cgacgccgacggcgacggcg 14713
>ref|XM_393252.2| PREDICTED: Apis mellifera similar to CG2989-PA (LOC409759), mRNA Length = 8280 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 cgtcgacgccgacggcgacggcgt 299 |||||||||||||| ||||||||| Sbjct: 1620 cgtcgacgccgacgacgacggcgt 1597
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||| |||||||||||||||| Sbjct: 850676 ccgtcgaggccgacggcgacggcg 850653
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||||| |||||||||||||| Sbjct: 3384289 ccgtcgacggcgacggcgacggcg 3384266 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||||| |||||||||||||| Sbjct: 3345862 ccgtcgacggcgacggcgacggcg 3345885
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 27888333 cgacgccgacggcgacggcg 27888352 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agtccgtcgacgccgacggc 291 |||||||||||||||||||| Sbjct: 12449041 agtccgtcgacgccgacggc 12449060
>dbj|AB120735.1| Gryllus bimaculatus Gbhb mRNA for hunchback, complete cds Length = 2672 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 640 cgacgccgacggcgacggcg 659
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 74421 tcgacgccgacggcgacggc 74402
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tccgtcgacgccgacggcga 293 |||||||||||||||||||| Sbjct: 125083 tccgtcgacgccgacggcga 125102
>dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0421H01 Length = 142638 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agtccgtcgacgccgacggc 291 |||||||||||||||||||| Sbjct: 22775 agtccgtcgacgccgacggc 22794
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 68143 cgacgccgacggcgacggcg 68124
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 154773 cgacgccgacggcgacggcg 154754
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 42256 cgacgccgacggcgacggcg 42275
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||||| |||||||||||||| Sbjct: 24109 ccgtcgacggcgacggcgacggcg 24086
>gb|AE005040.1| Halobacterium sp. NRC-1 section 71 of 170 of the complete genome Length = 10881 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 8972 tcgacgccgacggcgacggc 8953
>gb|AY943953.1| Streptomyces sp. FQ1 plasmid pFP1, complete sequence Length = 39360 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ggcggccgccgtctcgatcg 115 |||||||||||||||||||| Sbjct: 593 ggcggccgccgtctcgatcg 574
>dbj|AK121051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G22, full insert sequence Length = 3347 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 368 tcgacgccgacggcgacggc 387
>dbj|AK111697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004F23, full insert sequence Length = 1928 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 859 cgacgccgacggcgacggcg 840
>dbj|AK111574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074D22, full insert sequence Length = 2045 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||| |||||||||||||||| Sbjct: 113 ccgtcgaggccgacggcgacggcg 90
>dbj|AK110810.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F04, full insert sequence Length = 1366 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||||| |||||||||||||| Sbjct: 536 ccgtcgacggcgacggcgacggcg 559
>dbj|AK106911.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A07, full insert sequence Length = 1659 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 cgtcgacgccgacggcgacggcgt 299 ||||||||||| |||||||||||| Sbjct: 74 cgtcgacgccgtcggcgacggcgt 51
>dbj|AK100992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146F09, full insert sequence Length = 1581 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 288 cgacgccgacggcgacggcg 269
>dbj|AK100029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147J04, full insert sequence Length = 1297 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agtccgtcgacgccgacggc 291 |||||||||||||||||||| Sbjct: 899 agtccgtcgacgccgacggc 918
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||||| |||||||||||||| Sbjct: 155555 ccgtcgacggcgacggcgacggcg 155578
>gb|AY107690.1| Zea mays PCO082571 mRNA sequence Length = 577 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 9 cgacgccgacggcgacggcg 28
>gb|AE003547.3| Drosophila melanogaster chromosome 3L, section 38 of 83 of the complete sequence Length = 281339 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cgtcgacgccgacggcgacg 295 |||||||||||||||||||| Sbjct: 249619 cgtcgacgccgacggcgacg 249600
>gb|DQ180308.1| Fragaria x ananassa clone PBCESTFXA3 SSR marker Length = 882 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ctcgcctgcgccgccgtcgc 239 |||||||||||||||||||| Sbjct: 248 ctcgcctgcgccgccgtcgc 267
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcgacgccgacggcgacggc 297 |||||||||||||||||||| Sbjct: 1052099 tcgacgccgacggcgacggc 1052118
>gb|L20947.1|CREEZYC Chlamydomonas reinhardtii ezy-1 mRNA, 3' end of cds Length = 1449 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 77 cgacgccgacggcgacggcg 96
>gb|L20946.1|CREEZYB Chlamydomonas reinhardtii ezy-1 mRNA, complete cds Length = 2148 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgacgccgacggcgacggcg 298 |||||||||||||||||||| Sbjct: 773 cgacgccgacggcgacggcg 792
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ccgtcgacgccgacggcgacggcg 298 ||||||| |||||||||||||||| Sbjct: 850678 ccgtcgaggccgacggcgacggcg 850655
>dbj|AB018799.1| Streptomyces coelicolor gene for eukaryotic-type protein kinase, complete cds Length = 1920 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cgccgccgtcgcgccgcgctcctc 251 |||||||||||| ||||||||||| Sbjct: 1873 cgccgccgtcgctccgcgctcctc 1896 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,186,264 Number of Sequences: 3902068 Number of extensions: 2186264 Number of successful extensions: 58162 Number of sequences better than 10.0: 219 Number of HSP's better than 10.0 without gapping: 230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53335 Number of HSP's gapped (non-prelim): 4741 length of query: 309 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 287 effective length of database: 17,147,199,772 effective search space: 4921246334564 effective search space used: 4921246334564 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
