| Clone Name | baet31h04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C04, full insert sequence Length = 1937 Score = 402 bits (203), Expect = e-109 Identities = 386/447 (86%) Strand = Plus / Plus Query: 1 taatgatgcacagaataaagctggagatttatacagcaactatcatgactactcagtcac 60 ||||||||||||||| ||||| || ||||| ||||||| ||| ||||||| ||| || || Sbjct: 785 taatgatgcacagaacaaagccggcgatttgtacagcagctaccatgacttctcggttac 844 Query: 61 gcaacatgatgtgttgcgtgatctgccacttcacatgagcggacgtgattctctgaacaa 120 ||||||||||| ||| | ||||| | ||||||||||| || |||||| |||||||||| Sbjct: 845 acaacatgatgtattgagggatctagcgcttcacatgagtggtcgtgatgctctgaacaa 904 Query: 121 aaggaggcggttagtgatgccaagaagagaagaatcacttccgagagattggcagaggaa 180 |||| ||| | ||| |||||||||||||||||||||| |||| |||||||||||||| Sbjct: 905 ccggagacggctggtggtgccaagaagagaagaatcactaccgaaggattggcagaggaa 964 Query: 181 taaggaccttccctttgaagctcagattgtttctattcatacaggcgagatgaaagaatc 240 ||||||| ||| || ||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 965 taaggacactccgttcgaagctcagatagtttccattcatacaggtgagatgaaagaatc 1024 Query: 241 tgactggttccagatgagcttccccaaggcagaagttcttatcctcaacttcgcctcaag 300 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 1025 tgactggttccagatgagcttccccaaggccgaagtgcttatcctcaacttcgcgtcaag 1084 Query: 301 cgtatactacctcccgccgttcattgcaacaatgcagaacctgaaggccctggtgctgat 360 |||||||| ||||| || ||||||||||| ||||||||| |||| |||||||||||||| Sbjct: 1085 tgtatactatctcccaccattcattgcaaccatgcagaacttgaaagccctggtgctgat 1144 Query: 361 caactatggtactaccagtgcagcccttgacaatttgtctgccttcaccacactaagtga 420 ||||||||| || | ||||||| ||||||| || | || ||||||||||| || |||| Sbjct: 1145 caactatggcaccatcagtgcaacccttgataacctatccgccttcaccacgctcagtgg 1204 Query: 421 cctaaggagtctttggctggaaaagat 447 ||| ||||| |||||||| || ||||| Sbjct: 1205 cctgaggagcctttggcttgagaagat 1231
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 242 bits (122), Expect = 8e-61 Identities = 200/226 (88%) Strand = Plus / Plus Query: 222 caggcgagatgaaagaatctgactggttccagatgagcttccccaaggcagaagttctta 281 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 24491777 caggtgagatgaaagaatctgactggttccagatgagcttccccaaggccgaagtgctta 24491836 Query: 282 tcctcaacttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacc 341 ||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||| Sbjct: 24491837 tcctcaacttcgcgtcaagtgtatactatctcccaccattcattgcaaccatgcagaact 24491896 Query: 342 tgaaggccctggtgctgatcaactatggtactaccagtgcagcccttgacaatttgtctg 401 |||| ||||||||||||||||||||||| || | ||||||| ||||||| || | || | Sbjct: 24491897 tgaaagccctggtgctgatcaactatggcaccatcagtgcaacccttgataacctatccg 24491956 Query: 402 ccttcaccacactaagtgacctaaggagtctttggctggaaaagat 447 |||||||||| || |||||||| ||||| |||||||| || ||||| Sbjct: 24491957 ccttcaccacgctcagtgacctgaggagcctttggcttgagaagat 24492002 Score = 161 bits (81), Expect = 2e-36 Identities = 177/209 (84%) Strand = Plus / Plus Query: 17 aaagctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttg 76 ||||| || ||||| ||||||| ||| ||||||| ||| || || ||||||||||| ||| Sbjct: 24491326 aaagccggcgatttgtacagcagctaccatgacttctcggttacacaacatgatgtattg 24491385 Query: 77 cgtgatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtg 136 | ||||| | ||||||||||| || |||||| |||||||||| |||| ||| | ||| Sbjct: 24491386 agggatctagcgcttcacatgagtggtcgtgatgctctgaacaaccggagacggctggtg 24491445 Query: 137 atgccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttcccttt 196 ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| || Sbjct: 24491446 atgccaagaagagaagaatcactaccgaaggattggcagaggaataaggacactccgttc 24491505 Query: 197 gaagctcagattgtttctattcatacagg 225 ||||||||||| ||||| ||||||||||| Sbjct: 24491506 gaagctcagatagtttccattcatacagg 24491534
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 242 bits (122), Expect = 8e-61 Identities = 200/226 (88%) Strand = Plus / Plus Query: 222 caggcgagatgaaagaatctgactggttccagatgagcttccccaaggcagaagttctta 281 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 24419983 caggtgagatgaaagaatctgactggttccagatgagcttccccaaggccgaagtgctta 24420042 Query: 282 tcctcaacttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacc 341 ||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||| Sbjct: 24420043 tcctcaacttcgcgtcaagtgtatactatctcccaccattcattgcaaccatgcagaact 24420102 Query: 342 tgaaggccctggtgctgatcaactatggtactaccagtgcagcccttgacaatttgtctg 401 |||| ||||||||||||||||||||||| || | ||||||| ||||||| || | || | Sbjct: 24420103 tgaaagccctggtgctgatcaactatggcaccatcagtgcaacccttgataacctatccg 24420162 Query: 402 ccttcaccacactaagtgacctaaggagtctttggctggaaaagat 447 |||||||||| || |||||||| ||||| |||||||| || ||||| Sbjct: 24420163 ccttcaccacgctcagtgacctgaggagcctttggcttgagaagat 24420208 Score = 161 bits (81), Expect = 2e-36 Identities = 177/209 (84%) Strand = Plus / Plus Query: 17 aaagctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttg 76 ||||| || ||||| ||||||| ||| ||||||| ||| || || ||||||||||| ||| Sbjct: 24419532 aaagccggcgatttgtacagcagctaccatgacttctcggttacacaacatgatgtattg 24419591 Query: 77 cgtgatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtg 136 | ||||| | ||||||||||| || |||||| |||||||||| |||| ||| | ||| Sbjct: 24419592 agggatctagcgcttcacatgagtggtcgtgatgctctgaacaaccggagacggctggtg 24419651 Query: 137 atgccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttcccttt 196 ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| || Sbjct: 24419652 atgccaagaagagaagaatcactaccgaaggattggcagaggaataaggacactccgttc 24419711 Query: 197 gaagctcagattgtttctattcatacagg 225 ||||||||||| ||||| ||||||||||| Sbjct: 24419712 gaagctcagatagtttccattcatacagg 24419740
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120071 Score = 242 bits (122), Expect = 8e-61 Identities = 200/226 (88%) Strand = Plus / Plus Query: 222 caggcgagatgaaagaatctgactggttccagatgagcttccccaaggcagaagttctta 281 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 62808 caggtgagatgaaagaatctgactggttccagatgagcttccccaaggccgaagtgctta 62867 Query: 282 tcctcaacttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacc 341 ||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||| Sbjct: 62868 tcctcaacttcgcgtcaagtgtatactatctcccaccattcattgcaaccatgcagaact 62927 Query: 342 tgaaggccctggtgctgatcaactatggtactaccagtgcagcccttgacaatttgtctg 401 |||| ||||||||||||||||||||||| || | ||||||| ||||||| || | || | Sbjct: 62928 tgaaagccctggtgctgatcaactatggcaccatcagtgcaacccttgataacctatccg 62987 Query: 402 ccttcaccacactaagtgacctaaggagtctttggctggaaaagat 447 |||||||||| || |||||||| ||||| |||||||| || ||||| Sbjct: 62988 ccttcaccacgctcagtgacctgaggagcctttggcttgagaagat 63033 Score = 161 bits (81), Expect = 2e-36 Identities = 177/209 (84%) Strand = Plus / Plus Query: 17 aaagctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttg 76 ||||| || ||||| ||||||| ||| ||||||| ||| || || ||||||||||| ||| Sbjct: 62357 aaagccggcgatttgtacagcagctaccatgacttctcggttacacaacatgatgtattg 62416 Query: 77 cgtgatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtg 136 | ||||| | ||||||||||| || |||||| |||||||||| |||| ||| | ||| Sbjct: 62417 agggatctagcgcttcacatgagtggtcgtgatgctctgaacaaccggagacggctggtg 62476 Query: 137 atgccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttcccttt 196 ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| || Sbjct: 62477 atgccaagaagagaagaatcactaccgaaggattggcagaggaataaggacactccgttc 62536 Query: 197 gaagctcagattgtttctattcatacagg 225 ||||||||||| ||||| ||||||||||| Sbjct: 62537 gaagctcagatagtttccattcatacagg 62565
>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence Length = 103167 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 230 atgaaagaatctgactggttccagatgagcttccccaaggcagaagttcttatcctcaac 289 ||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 24927 atgaaagaatcggactggttccagatgagcttccctaaggcagaagtgctgatcctcaac 24986 Query: 290 ttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacctgaaggcc 349 |||||||||||| | ||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 24987 ttcgcctcaagcttgtactacctcccaccgttcatcgcgacaatgcagaacctgaaagct 25046 Query: 350 ctggtgctgatcaactatggtactaccagtgcagcccttgacaa 393 ||||||||||||||||| || || | ||| || ||||||||||| Sbjct: 25047 ctggtgctgatcaactacggcaccagcagcgctgcccttgacaa 25090 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 20 gctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttgcgt 79 ||||||||||| ||||| | ||| ||||||||||| || || ||||||||||||||| | Sbjct: 24537 gctggagatttgtacagtagctaccatgactactcggtgacacaacatgatgtgttgaga 24596 Query: 80 gatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtgatg 139 ||||| | ||||||||||| || ||||| |||||||||| |||||||||| |||||| Sbjct: 24597 gatcttgctcttcacatgagtgggcgtgaccctctgaacaagcggaggcggttggtgatg 24656 Query: 140 ccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttccctttgaa 199 |||||||| |||||| ||||||| || |||||||||||||||||||| ||| |||||| Sbjct: 24657 ccaagaagggaagaaacacttcccagggattggcagaggaataaggatactccgtttgaa 24716 Query: 200 gctcagattgtttctattcatacagg 225 |||||||| ||||| ||||||||||| Sbjct: 24717 gctcagatagtttccattcatacagg 24742
>gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence Length = 125927 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 230 atgaaagaatctgactggttccagatgagcttccccaaggcagaagttcttatcctcaac 289 ||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 91572 atgaaagaatcggactggttccagatgagcttccctaaggcagaagtgctgatcctcaac 91631 Query: 290 ttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacctgaaggcc 349 |||||||||||| | ||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 91632 ttcgcctcaagcttgtactacctcccaccgttcatcgcgacaatgcagaacctgaaagct 91691 Query: 350 ctggtgctgatcaactatggtactaccagtgcagcccttgacaa 393 ||||||||||||||||| || || | ||| || ||||||||||| Sbjct: 91692 ctggtgctgatcaactacggcaccagcagcgctgcccttgacaa 91735 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 20 gctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttgcgt 79 ||||||||||| ||||| | ||| ||||||||||| || || ||||||||||||||| | Sbjct: 91182 gctggagatttgtacagtagctaccatgactactcggtgacacaacatgatgtgttgaga 91241 Query: 80 gatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtgatg 139 ||||| | ||||||||||| || ||||| |||||||||| |||||||||| |||||| Sbjct: 91242 gatcttgctcttcacatgagtgggcgtgaccctctgaacaagcggaggcggttggtgatg 91301 Query: 140 ccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttccctttgaa 199 |||||||| |||||| ||||||| || |||||||||||||||||||| ||| |||||| Sbjct: 91302 ccaagaagggaagaaacacttcccagggattggcagaggaataaggatactccgtttgaa 91361 Query: 200 gctcagattgtttctattcatacagg 225 |||||||| ||||| ||||||||||| Sbjct: 91362 gctcagatagtttccattcatacagg 91387
>gb|AC120405.7| Mus musculus chromosome 1, clone RP24-409F22, complete sequence Length = 158876 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 atgcagaacctgaaggccctgg 353 |||||||||||||||||||||| Sbjct: 86259 atgcagaacctgaaggccctgg 86238
>gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, complete sequence Length = 194086 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 atgcagaacctgaaggccctgg 353 |||||||||||||||||||||| Sbjct: 8213 atgcagaacctgaaggccctgg 8192
>gb|AY324218.1| HIV-2 isolate Pat4-02 from Sweden pol polyprotein (pol) gene, partial cds Length = 1047 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gccaagaagagaagaatcact 159 ||||||||||||||||||||| Sbjct: 598 gccaagaagagaagaatcact 618
>gb|AY324216.1| HIV-2 isolate Pat4-00 from Sweden pol polyprotein (pol) gene, partial cds Length = 1047 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gccaagaagagaagaatcact 159 ||||||||||||||||||||| Sbjct: 598 gccaagaagagaagaatcact 618
>gb|AY324215.1| HIV-2 isolate Pat4-99 from Sweden pol polyprotein (pol) gene, partial cds Length = 1047 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gccaagaagagaagaatcact 159 ||||||||||||||||||||| Sbjct: 598 gccaagaagagaagaatcact 618
>gb|AY324214.1| HIV-2 isolate Pat4-97 from Sweden pol polyprotein (pol) gene, partial cds Length = 1047 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gccaagaagagaagaatcact 159 ||||||||||||||||||||| Sbjct: 598 gccaagaagagaagaatcact 618
>gb|AY324213.1| HIV-2 isolate Pat4-94 from Sweden pol polyprotein (pol) gene, partial cds Length = 1047 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gccaagaagagaagaatcact 159 ||||||||||||||||||||| Sbjct: 598 gccaagaagagaagaatcact 618
>gb|AY324212.1| HIV-2 isolate Pat4-92 from Sweden pol polyprotein (pol) gene, partial cds Length = 1047 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gccaagaagagaagaatcact 159 ||||||||||||||||||||| Sbjct: 598 gccaagaagagaagaatcact 618
>gb|DQ307022.1| HIV-2 isolate CRIK 147 from India, complete genome Length = 9851 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gccaagaagagaagaatcact 159 ||||||||||||||||||||| Sbjct: 2980 gccaagaagagaagaatcact 3000
>ref|NM_124099.1| Arabidopsis thaliana ADR1-L3; ATP binding AT5G47280 (ADR1-L3) mRNA, complete cds Length = 1872 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttccccaaggcagaagttct 279 |||||||||||||||||||| Sbjct: 1078 ttccccaaggcagaagttct 1097
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 atgatgtgttgcgtgatctg 85 |||||||||||||||||||| Sbjct: 263447 atgatgtgttgcgtgatctg 263428
>gb|AC135016.3| Mus musculus BAC clone RP24-244B4 from chromosome 18, complete sequence Length = 177193 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 tcagattgtttctattcatacagg 225 |||||||||||||||| ||||||| Sbjct: 34652 tcagattgtttctatttatacagg 34629
>gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, complete sequence Length = 202340 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 tcagattgtttctattcatacagg 225 |||||||||||||||| ||||||| Sbjct: 126838 tcagattgtttctatttatacagg 126815
>emb|AL663078.8| Mouse DNA sequence from clone RP23-440P13 on chromosome 11 Contains the gene for a novel protein (6230425C22Rik) similar to Homo sapiens CGI-48 protein, the 5' end of the Mbtd1 gene for mbt domain containing 1 and one CpG island, complete sequence Length = 126275 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 ctgaacaaaaggaggcggttagtg 136 ||||||||||||| |||||||||| Sbjct: 12819 ctgaacaaaaggatgcggttagtg 12842
>gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete sequence Length = 100538 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 194 tttgaagctcagattgtttctattcatacagg 225 ||||||||||| |||||||| ||||| ||||| Sbjct: 84869 tttgaagctcaaattgtttcgattcacacagg 84900
>gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosome 9, complete sequence Length = 175606 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ttgaagctcagattgtttct 214 |||||||||||||||||||| Sbjct: 136440 ttgaagctcagattgtttct 136459
>dbj|AK078684.1| Mus musculus adult male eyeball cDNA, RIKEN full-length enriched library, clone:7530406I19 product:unclassifiable, full insert sequence Length = 3453 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 tcagattgtttctattcatacagg 225 |||||||||||||||| ||||||| Sbjct: 3208 tcagattgtttctatttatacagg 3185
>dbj|AK043628.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830013O05 product:Hypothetical tyrosine protein kinase/serine/threonine protein kinase/eukaryotic protein kinase containing protein, full insert sequence Length = 4630 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ttgaagctcagattgtttct 214 |||||||||||||||||||| Sbjct: 4030 ttgaagctcagattgtttct 4011
>dbj|AB018117.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5 Length = 88398 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttccccaaggcagaagttct 279 |||||||||||||||||||| Sbjct: 43107 ttccccaaggcagaagttct 43126
>emb|BX005107.4| Zebrafish DNA sequence from clone CH211-204F4 in linkage group 4, complete sequence Length = 187251 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ctcagattgtttctattcat 220 |||||||||||||||||||| Sbjct: 65491 ctcagattgtttctattcat 65510
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 agaacctgaaggccctggtg 355 |||||||||||||||||||| Sbjct: 2189671 agaacctgaaggccctggtg 2189690
>emb|AL732362.8| Mouse DNA sequence from clone RP23-53I23 on chromosome 2, complete sequence Length = 74997 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gatgccaagaagagaagaat 155 |||||||||||||||||||| Sbjct: 43675 gatgccaagaagagaagaat 43694 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,980,758 Number of Sequences: 3902068 Number of extensions: 3980758 Number of successful extensions: 68747 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68611 Number of HSP's gapped (non-prelim): 136 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)