ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet31h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK119516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 402 e-109
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 242 8e-61
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 242 8e-61
4emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb... 242 8e-61
5gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence 190 3e-45
6gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence 190 3e-45
7gb|AC120405.7| Mus musculus chromosome 1, clone RP24-409F22, com... 44 0.39
8gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, comp... 44 0.39
9gb|AY324218.1| HIV-2 isolate Pat4-02 from Sweden pol polyprotein... 42 1.5
10gb|AY324216.1| HIV-2 isolate Pat4-00 from Sweden pol polyprotein... 42 1.5
11gb|AY324215.1| HIV-2 isolate Pat4-99 from Sweden pol polyprotein... 42 1.5
12gb|AY324214.1| HIV-2 isolate Pat4-97 from Sweden pol polyprotein... 42 1.5
13gb|AY324213.1| HIV-2 isolate Pat4-94 from Sweden pol polyprotein... 42 1.5
14gb|AY324212.1| HIV-2 isolate Pat4-92 from Sweden pol polyprotein... 42 1.5
15gb|DQ307022.1| HIV-2 isolate CRIK 147 from India, complete genome 42 1.5
16ref|NM_124099.1| Arabidopsis thaliana ADR1-L3; ATP binding AT5G4... 40 6.1
17gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.1
18gb|AC135016.3| Mus musculus BAC clone RP24-244B4 from chromosome... 40 6.1
19gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, com... 40 6.1
20emb|AL663078.8| Mouse DNA sequence from clone RP23-440P13 on chr... 40 6.1
21gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete ... 40 6.1
22gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosom... 40 6.1
23dbj|AK078684.1| Mus musculus adult male eyeball cDNA, RIKEN full... 40 6.1
24dbj|AK043628.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 6.1
25dbj|AB018117.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.1
26emb|BX005107.4| Zebrafish DNA sequence from clone CH211-204F4 in... 40 6.1
27dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.1
28emb|AL732362.8| Mouse DNA sequence from clone RP23-53I23 on chro... 40 6.1

>dbj|AK119516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C04, full
            insert sequence
          Length = 1937

 Score =  402 bits (203), Expect = e-109
 Identities = 386/447 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1    taatgatgcacagaataaagctggagatttatacagcaactatcatgactactcagtcac 60
            ||||||||||||||| ||||| || ||||| ||||||| ||| ||||||| ||| || ||
Sbjct: 785  taatgatgcacagaacaaagccggcgatttgtacagcagctaccatgacttctcggttac 844

                                                                        
Query: 61   gcaacatgatgtgttgcgtgatctgccacttcacatgagcggacgtgattctctgaacaa 120
             ||||||||||| ||| | |||||  | ||||||||||| || |||||| ||||||||||
Sbjct: 845  acaacatgatgtattgagggatctagcgcttcacatgagtggtcgtgatgctctgaacaa 904

                                                                        
Query: 121  aaggaggcggttagtgatgccaagaagagaagaatcacttccgagagattggcagaggaa 180
              |||| ||| | ||| |||||||||||||||||||||| ||||  ||||||||||||||
Sbjct: 905  ccggagacggctggtggtgccaagaagagaagaatcactaccgaaggattggcagaggaa 964

                                                                        
Query: 181  taaggaccttccctttgaagctcagattgtttctattcatacaggcgagatgaaagaatc 240
            |||||||  ||| || ||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 965  taaggacactccgttcgaagctcagatagtttccattcatacaggtgagatgaaagaatc 1024

                                                                        
Query: 241  tgactggttccagatgagcttccccaaggcagaagttcttatcctcaacttcgcctcaag 300
            |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 1025 tgactggttccagatgagcttccccaaggccgaagtgcttatcctcaacttcgcgtcaag 1084

                                                                        
Query: 301  cgtatactacctcccgccgttcattgcaacaatgcagaacctgaaggccctggtgctgat 360
             |||||||| ||||| || ||||||||||| ||||||||| |||| ||||||||||||||
Sbjct: 1085 tgtatactatctcccaccattcattgcaaccatgcagaacttgaaagccctggtgctgat 1144

                                                                        
Query: 361  caactatggtactaccagtgcagcccttgacaatttgtctgccttcaccacactaagtga 420
            ||||||||| || | ||||||| ||||||| ||  | || ||||||||||| || |||| 
Sbjct: 1145 caactatggcaccatcagtgcaacccttgataacctatccgccttcaccacgctcagtgg 1204

                                       
Query: 421  cctaaggagtctttggctggaaaagat 447
            ||| ||||| |||||||| || |||||
Sbjct: 1205 cctgaggagcctttggcttgagaagat 1231



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  242 bits (122), Expect = 8e-61
 Identities = 200/226 (88%)
 Strand = Plus / Plus

                                                                            
Query: 222      caggcgagatgaaagaatctgactggttccagatgagcttccccaaggcagaagttctta 281
                |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 24491777 caggtgagatgaaagaatctgactggttccagatgagcttccccaaggccgaagtgctta 24491836

                                                                            
Query: 282      tcctcaacttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacc 341
                ||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||| 
Sbjct: 24491837 tcctcaacttcgcgtcaagtgtatactatctcccaccattcattgcaaccatgcagaact 24491896

                                                                            
Query: 342      tgaaggccctggtgctgatcaactatggtactaccagtgcagcccttgacaatttgtctg 401
                |||| ||||||||||||||||||||||| || | ||||||| ||||||| ||  | || |
Sbjct: 24491897 tgaaagccctggtgctgatcaactatggcaccatcagtgcaacccttgataacctatccg 24491956

                                                              
Query: 402      ccttcaccacactaagtgacctaaggagtctttggctggaaaagat 447
                |||||||||| || |||||||| ||||| |||||||| || |||||
Sbjct: 24491957 ccttcaccacgctcagtgacctgaggagcctttggcttgagaagat 24492002



 Score =  161 bits (81), Expect = 2e-36
 Identities = 177/209 (84%)
 Strand = Plus / Plus

                                                                            
Query: 17       aaagctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttg 76
                ||||| || ||||| ||||||| ||| ||||||| ||| || || ||||||||||| |||
Sbjct: 24491326 aaagccggcgatttgtacagcagctaccatgacttctcggttacacaacatgatgtattg 24491385

                                                                            
Query: 77       cgtgatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtg 136
                 | |||||  | ||||||||||| || |||||| ||||||||||  |||| ||| | |||
Sbjct: 24491386 agggatctagcgcttcacatgagtggtcgtgatgctctgaacaaccggagacggctggtg 24491445

                                                                            
Query: 137      atgccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttcccttt 196
                ||||||||||||||||||||||| ||||  |||||||||||||||||||||  ||| || 
Sbjct: 24491446 atgccaagaagagaagaatcactaccgaaggattggcagaggaataaggacactccgttc 24491505

                                             
Query: 197      gaagctcagattgtttctattcatacagg 225
                ||||||||||| ||||| |||||||||||
Sbjct: 24491506 gaagctcagatagtttccattcatacagg 24491534



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  242 bits (122), Expect = 8e-61
 Identities = 200/226 (88%)
 Strand = Plus / Plus

                                                                            
Query: 222      caggcgagatgaaagaatctgactggttccagatgagcttccccaaggcagaagttctta 281
                |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 24419983 caggtgagatgaaagaatctgactggttccagatgagcttccccaaggccgaagtgctta 24420042

                                                                            
Query: 282      tcctcaacttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacc 341
                ||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||| 
Sbjct: 24420043 tcctcaacttcgcgtcaagtgtatactatctcccaccattcattgcaaccatgcagaact 24420102

                                                                            
Query: 342      tgaaggccctggtgctgatcaactatggtactaccagtgcagcccttgacaatttgtctg 401
                |||| ||||||||||||||||||||||| || | ||||||| ||||||| ||  | || |
Sbjct: 24420103 tgaaagccctggtgctgatcaactatggcaccatcagtgcaacccttgataacctatccg 24420162

                                                              
Query: 402      ccttcaccacactaagtgacctaaggagtctttggctggaaaagat 447
                |||||||||| || |||||||| ||||| |||||||| || |||||
Sbjct: 24420163 ccttcaccacgctcagtgacctgaggagcctttggcttgagaagat 24420208



 Score =  161 bits (81), Expect = 2e-36
 Identities = 177/209 (84%)
 Strand = Plus / Plus

                                                                            
Query: 17       aaagctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttg 76
                ||||| || ||||| ||||||| ||| ||||||| ||| || || ||||||||||| |||
Sbjct: 24419532 aaagccggcgatttgtacagcagctaccatgacttctcggttacacaacatgatgtattg 24419591

                                                                            
Query: 77       cgtgatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtg 136
                 | |||||  | ||||||||||| || |||||| ||||||||||  |||| ||| | |||
Sbjct: 24419592 agggatctagcgcttcacatgagtggtcgtgatgctctgaacaaccggagacggctggtg 24419651

                                                                            
Query: 137      atgccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttcccttt 196
                ||||||||||||||||||||||| ||||  |||||||||||||||||||||  ||| || 
Sbjct: 24419652 atgccaagaagagaagaatcactaccgaaggattggcagaggaataaggacactccgttc 24419711

                                             
Query: 197      gaagctcagattgtttctattcatacagg 225
                ||||||||||| ||||| |||||||||||
Sbjct: 24419712 gaagctcagatagtttccattcatacagg 24419740



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>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 120071

 Score =  242 bits (122), Expect = 8e-61
 Identities = 200/226 (88%)
 Strand = Plus / Plus

                                                                         
Query: 222   caggcgagatgaaagaatctgactggttccagatgagcttccccaaggcagaagttctta 281
             |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 62808 caggtgagatgaaagaatctgactggttccagatgagcttccccaaggccgaagtgctta 62867

                                                                         
Query: 282   tcctcaacttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacc 341
             ||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||| 
Sbjct: 62868 tcctcaacttcgcgtcaagtgtatactatctcccaccattcattgcaaccatgcagaact 62927

                                                                         
Query: 342   tgaaggccctggtgctgatcaactatggtactaccagtgcagcccttgacaatttgtctg 401
             |||| ||||||||||||||||||||||| || | ||||||| ||||||| ||  | || |
Sbjct: 62928 tgaaagccctggtgctgatcaactatggcaccatcagtgcaacccttgataacctatccg 62987

                                                           
Query: 402   ccttcaccacactaagtgacctaaggagtctttggctggaaaagat 447
             |||||||||| || |||||||| ||||| |||||||| || |||||
Sbjct: 62988 ccttcaccacgctcagtgacctgaggagcctttggcttgagaagat 63033



 Score =  161 bits (81), Expect = 2e-36
 Identities = 177/209 (84%)
 Strand = Plus / Plus

                                                                         
Query: 17    aaagctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttg 76
             ||||| || ||||| ||||||| ||| ||||||| ||| || || ||||||||||| |||
Sbjct: 62357 aaagccggcgatttgtacagcagctaccatgacttctcggttacacaacatgatgtattg 62416

                                                                         
Query: 77    cgtgatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtg 136
              | |||||  | ||||||||||| || |||||| ||||||||||  |||| ||| | |||
Sbjct: 62417 agggatctagcgcttcacatgagtggtcgtgatgctctgaacaaccggagacggctggtg 62476

                                                                         
Query: 137   atgccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttcccttt 196
             ||||||||||||||||||||||| ||||  |||||||||||||||||||||  ||| || 
Sbjct: 62477 atgccaagaagagaagaatcactaccgaaggattggcagaggaataaggacactccgttc 62536

                                          
Query: 197   gaagctcagattgtttctattcatacagg 225
             ||||||||||| ||||| |||||||||||
Sbjct: 62537 gaagctcagatagtttccattcatacagg 62565



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>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence
          Length = 103167

 Score =  190 bits (96), Expect = 3e-45
 Identities = 147/164 (89%)
 Strand = Plus / Plus

                                                                         
Query: 230   atgaaagaatctgactggttccagatgagcttccccaaggcagaagttcttatcctcaac 289
             ||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 24927 atgaaagaatcggactggttccagatgagcttccctaaggcagaagtgctgatcctcaac 24986

                                                                         
Query: 290   ttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacctgaaggcc 349
             |||||||||||| | ||||||||||| |||||||| || ||||||||||||||||| || 
Sbjct: 24987 ttcgcctcaagcttgtactacctcccaccgttcatcgcgacaatgcagaacctgaaagct 25046

                                                         
Query: 350   ctggtgctgatcaactatggtactaccagtgcagcccttgacaa 393
             ||||||||||||||||| || || | ||| || |||||||||||
Sbjct: 25047 ctggtgctgatcaactacggcaccagcagcgctgcccttgacaa 25090



 Score =  178 bits (90), Expect = 1e-41
 Identities = 177/206 (85%)
 Strand = Plus / Plus

                                                                         
Query: 20    gctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttgcgt 79
             ||||||||||| ||||| | ||| ||||||||||| || || ||||||||||||||| | 
Sbjct: 24537 gctggagatttgtacagtagctaccatgactactcggtgacacaacatgatgtgttgaga 24596

                                                                         
Query: 80    gatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtgatg 139
             |||||  | ||||||||||| || |||||  ||||||||||  |||||||||| ||||||
Sbjct: 24597 gatcttgctcttcacatgagtgggcgtgaccctctgaacaagcggaggcggttggtgatg 24656

                                                                         
Query: 140   ccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttccctttgaa 199
             |||||||| |||||| ||||||| || ||||||||||||||||||||   ||| ||||||
Sbjct: 24657 ccaagaagggaagaaacacttcccagggattggcagaggaataaggatactccgtttgaa 24716

                                       
Query: 200   gctcagattgtttctattcatacagg 225
             |||||||| ||||| |||||||||||
Sbjct: 24717 gctcagatagtttccattcatacagg 24742



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>gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence
          Length = 125927

 Score =  190 bits (96), Expect = 3e-45
 Identities = 147/164 (89%)
 Strand = Plus / Plus

                                                                         
Query: 230   atgaaagaatctgactggttccagatgagcttccccaaggcagaagttcttatcctcaac 289
             ||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 91572 atgaaagaatcggactggttccagatgagcttccctaaggcagaagtgctgatcctcaac 91631

                                                                         
Query: 290   ttcgcctcaagcgtatactacctcccgccgttcattgcaacaatgcagaacctgaaggcc 349
             |||||||||||| | ||||||||||| |||||||| || ||||||||||||||||| || 
Sbjct: 91632 ttcgcctcaagcttgtactacctcccaccgttcatcgcgacaatgcagaacctgaaagct 91691

                                                         
Query: 350   ctggtgctgatcaactatggtactaccagtgcagcccttgacaa 393
             ||||||||||||||||| || || | ||| || |||||||||||
Sbjct: 91692 ctggtgctgatcaactacggcaccagcagcgctgcccttgacaa 91735



 Score =  178 bits (90), Expect = 1e-41
 Identities = 177/206 (85%)
 Strand = Plus / Plus

                                                                         
Query: 20    gctggagatttatacagcaactatcatgactactcagtcacgcaacatgatgtgttgcgt 79
             ||||||||||| ||||| | ||| ||||||||||| || || ||||||||||||||| | 
Sbjct: 91182 gctggagatttgtacagtagctaccatgactactcggtgacacaacatgatgtgttgaga 91241

                                                                         
Query: 80    gatctgccacttcacatgagcggacgtgattctctgaacaaaaggaggcggttagtgatg 139
             |||||  | ||||||||||| || |||||  ||||||||||  |||||||||| ||||||
Sbjct: 91242 gatcttgctcttcacatgagtgggcgtgaccctctgaacaagcggaggcggttggtgatg 91301

                                                                         
Query: 140   ccaagaagagaagaatcacttccgagagattggcagaggaataaggaccttccctttgaa 199
             |||||||| |||||| ||||||| || ||||||||||||||||||||   ||| ||||||
Sbjct: 91302 ccaagaagggaagaaacacttcccagggattggcagaggaataaggatactccgtttgaa 91361

                                       
Query: 200   gctcagattgtttctattcatacagg 225
             |||||||| ||||| |||||||||||
Sbjct: 91362 gctcagatagtttccattcatacagg 91387



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>gb|AC120405.7| Mus musculus chromosome 1, clone RP24-409F22, complete sequence
          Length = 158876

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 332   atgcagaacctgaaggccctgg 353
             ||||||||||||||||||||||
Sbjct: 86259 atgcagaacctgaaggccctgg 86238



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>gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, complete sequence
          Length = 194086

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 332  atgcagaacctgaaggccctgg 353
            ||||||||||||||||||||||
Sbjct: 8213 atgcagaacctgaaggccctgg 8192



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>gb|AY324218.1| HIV-2 isolate Pat4-02 from Sweden pol polyprotein (pol) gene,
           partial cds
          Length = 1047

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 139 gccaagaagagaagaatcact 159
           |||||||||||||||||||||
Sbjct: 598 gccaagaagagaagaatcact 618



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>gb|AY324216.1| HIV-2 isolate Pat4-00 from Sweden pol polyprotein (pol) gene,
           partial cds
          Length = 1047

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 139 gccaagaagagaagaatcact 159
           |||||||||||||||||||||
Sbjct: 598 gccaagaagagaagaatcact 618



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>gb|AY324215.1| HIV-2 isolate Pat4-99 from Sweden pol polyprotein (pol) gene,
           partial cds
          Length = 1047

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 139 gccaagaagagaagaatcact 159
           |||||||||||||||||||||
Sbjct: 598 gccaagaagagaagaatcact 618



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>gb|AY324214.1| HIV-2 isolate Pat4-97 from Sweden pol polyprotein (pol) gene,
           partial cds
          Length = 1047

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 139 gccaagaagagaagaatcact 159
           |||||||||||||||||||||
Sbjct: 598 gccaagaagagaagaatcact 618



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>gb|AY324213.1| HIV-2 isolate Pat4-94 from Sweden pol polyprotein (pol) gene,
           partial cds
          Length = 1047

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 139 gccaagaagagaagaatcact 159
           |||||||||||||||||||||
Sbjct: 598 gccaagaagagaagaatcact 618



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>gb|AY324212.1| HIV-2 isolate Pat4-92 from Sweden pol polyprotein (pol) gene,
           partial cds
          Length = 1047

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 139 gccaagaagagaagaatcact 159
           |||||||||||||||||||||
Sbjct: 598 gccaagaagagaagaatcact 618



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>gb|DQ307022.1| HIV-2 isolate CRIK 147 from India, complete genome
          Length = 9851

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 139  gccaagaagagaagaatcact 159
            |||||||||||||||||||||
Sbjct: 2980 gccaagaagagaagaatcact 3000



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>ref|NM_124099.1| Arabidopsis thaliana ADR1-L3; ATP binding AT5G47280 (ADR1-L3) mRNA,
            complete cds
          Length = 1872

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 260  ttccccaaggcagaagttct 279
            ||||||||||||||||||||
Sbjct: 1078 ttccccaaggcagaagttct 1097



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     atgatgtgttgcgtgatctg 85
              ||||||||||||||||||||
Sbjct: 263447 atgatgtgttgcgtgatctg 263428



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>gb|AC135016.3| Mus musculus BAC clone RP24-244B4 from chromosome 18, complete sequence
          Length = 177193

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 202   tcagattgtttctattcatacagg 225
             |||||||||||||||| |||||||
Sbjct: 34652 tcagattgtttctatttatacagg 34629



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>gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, complete sequence
          Length = 202340

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 202    tcagattgtttctattcatacagg 225
              |||||||||||||||| |||||||
Sbjct: 126838 tcagattgtttctatttatacagg 126815



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>emb|AL663078.8| Mouse DNA sequence from clone RP23-440P13 on chromosome 11 Contains the
             gene for a novel protein (6230425C22Rik) similar to Homo
             sapiens CGI-48 protein, the 5' end of the Mbtd1 gene for
             mbt domain containing 1 and one CpG island, complete
             sequence
          Length = 126275

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 113   ctgaacaaaaggaggcggttagtg 136
             ||||||||||||| ||||||||||
Sbjct: 12819 ctgaacaaaaggatgcggttagtg 12842



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>gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete sequence
          Length = 100538

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 194   tttgaagctcagattgtttctattcatacagg 225
             ||||||||||| |||||||| ||||| |||||
Sbjct: 84869 tttgaagctcaaattgtttcgattcacacagg 84900



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>gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosome 9, complete sequence
          Length = 175606

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    ttgaagctcagattgtttct 214
              ||||||||||||||||||||
Sbjct: 136440 ttgaagctcagattgtttct 136459



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>dbj|AK078684.1| Mus musculus adult male eyeball cDNA, RIKEN full-length enriched
            library, clone:7530406I19 product:unclassifiable, full
            insert sequence
          Length = 3453

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 202  tcagattgtttctattcatacagg 225
            |||||||||||||||| |||||||
Sbjct: 3208 tcagattgtttctatttatacagg 3185



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>dbj|AK043628.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830013O05 product:Hypothetical tyrosine
            protein kinase/serine/threonine protein kinase/eukaryotic
            protein kinase containing protein, full insert sequence
          Length = 4630

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  ttgaagctcagattgtttct 214
            ||||||||||||||||||||
Sbjct: 4030 ttgaagctcagattgtttct 4011



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>dbj|AB018117.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5
          Length = 88398

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   ttccccaaggcagaagttct 279
             ||||||||||||||||||||
Sbjct: 43107 ttccccaaggcagaagttct 43126



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>emb|BX005107.4| Zebrafish DNA sequence from clone CH211-204F4 in linkage group 4,
             complete sequence
          Length = 187251

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ctcagattgtttctattcat 220
             ||||||||||||||||||||
Sbjct: 65491 ctcagattgtttctattcat 65510



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 336     agaacctgaaggccctggtg 355
               ||||||||||||||||||||
Sbjct: 2189671 agaacctgaaggccctggtg 2189690



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>emb|AL732362.8| Mouse DNA sequence from clone RP23-53I23 on chromosome 2, complete
             sequence
          Length = 74997

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   gatgccaagaagagaagaat 155
             ||||||||||||||||||||
Sbjct: 43675 gatgccaagaagagaagaat 43694


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,980,758
Number of Sequences: 3902068
Number of extensions: 3980758
Number of successful extensions: 68747
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68611
Number of HSP's gapped (non-prelim): 136
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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