ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet31g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TER_EUGGR (Q5EU90) Trans-2-enoyl-CoA reductase, mitochondrial pr... 29 5.1
2DHPS_SHIFL (P0AC15) Dihydropteroate synthase (EC 2.5.1.15) (DHPS... 29 5.1
3DHPS_ECOLI (P0AC13) Dihydropteroate synthase (EC 2.5.1.15) (DHPS... 29 5.1
4DHPS_ECOL6 (P0AC14) Dihydropteroate synthase (EC 2.5.1.15) (DHPS... 29 5.1

>TER_EUGGR (Q5EU90) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.44)
          Length = 539

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 118 VRPAMATIVNTTEEEPMLAVVRS-IAQQTWADAGPEVADPEVA 243
           +RP  A  + T  E P +A   S  A   WA AGP+ A P VA
Sbjct: 55  MRPTTAAALTTMREVPQMAEGFSGEATSAWAAAGPQWAAPLVA 97



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>DHPS_SHIFL (P0AC15) Dihydropteroate synthase (EC 2.5.1.15) (DHPS)|
           (Dihydropteroate pyrophosphorylase)
          Length = 282

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 112 EGVRPAMATIVNTTEEEPMLAVVRSIAQQTWADAGPEVADPEVARLCAEAQQHVL 276
           E  RP  A +    E + ++ VV +IAQ+       + + PEV R  A+   H++
Sbjct: 60  ESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHII 114



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>DHPS_ECOLI (P0AC13) Dihydropteroate synthase (EC 2.5.1.15) (DHPS)|
           (Dihydropteroate pyrophosphorylase)
          Length = 282

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 112 EGVRPAMATIVNTTEEEPMLAVVRSIAQQTWADAGPEVADPEVARLCAEAQQHVL 276
           E  RP  A +    E + ++ VV +IAQ+       + + PEV R  A+   H++
Sbjct: 60  ESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHII 114



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>DHPS_ECOL6 (P0AC14) Dihydropteroate synthase (EC 2.5.1.15) (DHPS)|
           (Dihydropteroate pyrophosphorylase)
          Length = 282

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 112 EGVRPAMATIVNTTEEEPMLAVVRSIAQQTWADAGPEVADPEVARLCAEAQQHVL 276
           E  RP  A +    E + ++ VV +IAQ+       + + PEV R  A+   H++
Sbjct: 60  ESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHII 114


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,031,652
Number of Sequences: 219361
Number of extensions: 350070
Number of successful extensions: 1320
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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